BioProcess
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1 : Amino acid biosynthesis   1.1 : Aromatic amino acid family   1.2 : Aspartate family   1.3 : Glutamate family   1.4 : Pyruvate family   1.5 : Serine family   1.6 : Histidine family 2 : Purines, pyrimidines, nucleosides, and nucleotides   2.1 : 2'-Deoxyribonucleotide metabolism   2.2 : Nucleotide and nucleoside interconversions   2.3 : Purine ribonucleotide biosynthesis   2.4 : Pyrimidine ribonucleotide biosynthesis   2.5 : Salvage of nucleosides and nucleotides   2.6 : Sugar-nucleotide biosynthesis and conversions 3 : Fatty acid and phospholipid metabolism   3.1 : Biosynthesis   3.2 : Degradation 4 : Biosynthesis of cofactors, prosthetic groups, and carriers   4.1 : Biotin   4.2 : Folic acid   4.3 : Heme, porphyrin, and cobalamin   4.4 : Lipoate   4.5 : Menaquinone and ubiquinone   4.6 : Molybdopterin   4.7 : Pantothenate and coenzyme A   4.8 : Pyridoxine   4.9 : Riboflavin, FMN, and FAD   4.10 : Glutathione and analogs   4.11 : Thiamine   4.12 : Pyridine nucleotides   4.13 : Chlorophyll and bacteriochlorphyll   4.14 : Siderophores 5 : Central intermediary metabolism   5.1 : Amino sugars   5.2 : One-carbon metabolism   5.3 : Phosphorus compounds   5.4 : Polyamine biosynthesis   5.5 : Sulfur metabolism   5.6 : Nitrogen fixation   5.7 : Nitrogen metabolism   5.8 : Electron carrier regeneration 6 : Energy metabolism   6.1 : Aerobic   6.2 : Amino acids and amines   6.3 : Anaerobic   6.4 : ATP-proton motive force interconversion   6.5 : Electron transport   6.6 : Entner-Doudoroff   6.7 : Fermentation   6.8 : Glycolysis/gluconeogenesis   6.9 : Pentose phosphate pathway   6.10 : Pyruvate dehydrogenase   6.11 : Sugars   6.12 : TCA cycle   6.13 : Methanogenesis   6.14 : Biosynthesis and degradation of polysaccharides   6.15 : Photosynthesis   6.16 : Chemoautotrophy 7 : Transport and binding proteins   7.1 : Amino acids, peptides and amines   7.2 : Anions   7.3 : Carbohydrates, organic alcohols, and acids   7.4 : Cations and iron carrying compounds   7.5 : Nucleosides, purines and pyrimidines   7.6 : Porins   7.7 : Unknown substrate 8 : DNA metabolism   8.1 : DNA replication, recombination, and repair   8.2 : Restriction/modification   8.3 : Degradation of DNA   8.4 : Chromosome-associated proteins 9 : Transcription   9.1 : Degradation of RNA   9.2 : DNA-dependent RNA polymerase   9.3 : Transcription factors   9.4 : RNA processing 10 : Protein synthesis   10.1 : tRNA aminoacylation   10.2 : Ribosomal proteins: synthesis and modification   10.3 : tRNA and rRNA base modification   10.4 : Translation factors 11 : Protein fate   11.1 : Protein and peptide secretion and trafficking   11.2 : Protein modification and repair   11.3 : Protein folding and stabilization   11.4 : Degradation of proteins, peptides, and glycopeptides 12 : Regulatory functions   12.1 : DNA interactions   12.2 : RNA interactions   12.3 : Protein interactions   12.4 : Small molecule interactions 13 : Signal transduction   13.1 : Two-component systems   13.2 : PTS 14 : Cell envelope   14.1 : Surface structures   14.2 : Biosynthesis and degradation of murein sacculus and peptidoglycan   14.3 : Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides 15 : Cellular processes   15.1 : Cell division   15.2 : Chemotaxis and motility   15.3 : Cell adhesion   15.4 : Conjugation   15.5 : Detoxification   15.6 : DNA transformation   15.7 : Sporulation and germination   15.8 : Toxin production and resistance   15.9 : Pathogenesis   15.10 : Adaptations to atypical conditions   15.11 : Biosynthesis of natural products   15.12 : Bioluminescence 16 : Biological processes   16.1 : Circulate   16.2 : Construct biomass (Anabolism)   16.3 : Control   16.4 : Excrete   16.5 : Explore   16.6 : Maintain   16.7 : Manage energy   16.8 : Protect   16.9 : Replicate   16.10 : Respire   16.11 : Scavenge (Catabolism)   16.12 : Sense   16.13 : Shape   16.14 : Store   16.15 : Symbiosis 17 : Mobile and extrachromosomal element functions   17.1 : Plasmid functions   17.2 : Prophage functions   17.3 : Transposon functions 18 : Unknown function   18.1 : Enzymes of unknown specificity 19 : Unclassified
Roles
5.5.4 : pH response 4.2.A.72 : The K+ uptake permease (KUP) Family
1 : Metabolism   1.1 : Carbon compound utilization    1.1.1 : Carbohydrates/Carbon compounds     1.1.1.1 : D-allose catabolism     1.1.1.2 : 2,5-ketogluconate metabolism     1.1.1.3 : D-arabinose catabolism     1.1.1.4 : D-galactarate catabolism     1.1.1.5 : D-galacturonate catabolism     1.1.1.6 : D-glucarate catabolism     1.1.1.7 : D-glucuronate catabolism     1.1.1.8 : L-arabinose catabolism     1.1.1.9 : L-idonate catabolism     1.1.1.10 : L-lyxose metabolism     1.1.1.11 : Fucose catabolism     1.1.1.12 : Galactitol catabolism     1.1.1.13 : Galactonate catabolism     1.1.1.14 : Lactose degradation     1.1.1.15 : Mannose catabolism     1.1.1.16 : Rhamnose catabolism     1.1.1.17 : Sorbitol degradation     1.1.1.18 : Trehalose degradation, low osmolarity+     1.1.1.19 : Xylose catabolism     1.1.1.20 : Glycol degradation     1.1.1.21 : Mannitol degradation     1.1.1.22 : Ribose degradation     1.1.1.23 : Galactose degradation     1.1.1.24 : Sorbose degradation     1.1.1.25 : L-ascorbate degradation    1.1.2 : Fatty acids (fatty acid oxidation)     1.1.2.1 : Degradation of short-chain fatty acids     1.1.2.2 : 3-phenylpropionate and 3-(3-hydroxyphenyl)propionate degradation     1.1.2.3 : Propionate degradation    1.1.3 : Amino acids     1.1.3.1 : L-alanine degradation     1.1.3.2 : L-serine degradation     1.1.3.3 : Arginine catabolism     1.1.3.4 : Glutamate degradation     1.1.3.5 : Glycine cleavage     1.1.3.6 : Proline utilization     1.1.3.7 : Threonine catabolism     1.1.3.8 : Tryptophan utilization     1.1.3.9 : L-cysteine catabolism     1.1.3.10 : Lysine cleavage     1.1.3.11 : Histidine degradation     1.1.3.12 : Leucine degradation     1.1.3.13 : Methionine degradation     1.1.3.14 : Valine degradation     1.1.3.15 : Phenylalanine, tyrosine degradation    1.1.4 : Amines     1.1.4.1 : Phenylethylamine degradation     1.1.4.2 : Carnitine degradation     1.1.4.3 : Ornithine degradation    1.1.5 : Others     1.1.5.1 : Phenylacetic acid degradation     1.1.5.2 : Ethanol degradation     1.1.5.3 : Eugenol catabolism     1.1.5.4 : Beta-ketoadipate pathway     1.1.5.5 : Mandelate catabolism   1.2 : Macromolecule degradation    1.2.1 : RNA    1.2.2 : DNA    1.2.3 : Proteins/peptides/glycopeptides    1.2.4 : Polysaccharides     1.2.4.1 : Glycogen catabolism     1.2.4.2 : Chitin catabolism   1.3 : Energy metabolism (carbon)    1.3.1 : Glycolysis    1.3.2 : Pentose phosphate shunt, oxidative branch    1.3.3 : Pyruvate dehydrogenase    1.3.4 : Tricarboxylic acid cycle    1.3.5 : Fermentation    1.3.6 : Aerobic respiration    1.3.7 : Anaerobic respiration    1.3.8 : ATP proton motive force interconversion    1.3.9 : Entner-Doudoroff pathway   1.4 : Energy production/transport    1.4.1 : Electron donor    1.4.2 : Electron acceptor    1.4.3 : Electron carrier   1.5 : Building block biosynthesis    1.5.1 : Amino acids     1.5.1.1 : Glutamate     1.5.1.2 : Glutamine     1.5.1.3 : Arginine     1.5.1.4 : Proline     1.5.1.5 : Aspartate     1.5.1.6 : Asparagine     1.5.1.7 : Lysine, diaminopimelate     1.5.1.8 : Threonine     1.5.1.9 : Methionine     1.5.1.10 : Glycine     1.5.1.11 : Serine     1.5.1.12 : Cysteine     1.5.1.13 : Phenylalanine     1.5.1.14 : Tyrosine     1.5.1.15 : Tryptophan     1.5.1.16 : Histidine     1.5.1.17 : Alanine     1.5.1.18 : Isoleucine/valine     1.5.1.19 : Leucine     1.5.1.20 : Chorismate     1.5.1.21 : Homoserine    1.5.2 : Nucleotide     1.5.2.1 : Purine biosynthesis     1.5.2.2 : Pyrimidine biosynthesis     1.5.2.3 : Purine ribonucleotide biosynthesis     1.5.2.4 : Pyrimidine ribonucleotide/ribonucleoside biosynthesis    1.5.3 : Cofactor, small molecule carrier     1.5.3.1 : Biotin     1.5.3.2 : Folic acid     1.5.3.3 : Lipoate     1.5.3.4 : Molybdenum (molybdopterin)     1.5.3.5 : Coenzyme A     1.5.3.6 : Pyridoxine (vitamin B6)     1.5.3.7 : Nicotinamide adenine dinucleotide (NAD)     1.5.3.8 : Thiamine (Vitamin B1)     1.5.3.9 : Riboflavin (Vitamin B2), FAD, FMN     1.5.3.10 : Glutathione     1.5.3.11 : Menaquinone (MK), ubiquinone (Q)     1.5.3.12 : Heme, porphyrin     1.5.3.13 : Cobalamin (Vitamin B12)     1.5.3.14 : Enterochelin (enterobactin)     1.5.3.15 : Chrysobactin     1.5.3.16 : Achromobactin     1.5.3.19 : Isoprenoid biosynthesis     1.5.3.20 : Tetrahydrobiopterin biosynthesis     1.5.3.21 : Pyochelin biosynthesis    1.5.4 : Fatty acid and phosphatidic acid   1.6 : Macromolecules (cellular constituent) biosynthesis    1.6.1 : Phospholipid    1.6.2 : Colanic acid (M antigen)    1.6.3 : Lipopolysaccharide     1.6.3.1 : O antigen     1.6.3.2 : Core region     1.6.3.3 : Lipid A    1.6.4 : Enterobacterial common antigen (surface glycolipid)    1.6.5 : K antigen    1.6.6 : Osmoregulated periplasmic glucan    1.6.7 : Peptidoglycan (murein)    1.6.9 : Polysaccharides, cytoplasmic    1.6.10 : Lipoprotein    1.6.11 : Glycoprotein    1.6.12 : Flagella    1.6.13 : Fimbria, pili, curli    1.6.15 : Large molecule carriers     1.6.15.1 : Cytochromes     1.6.15.2 : Thioredoxin, glutaredoxin     1.6.15.3 : Biotin carboxyl carrier protein     1.6.15.4 : Acyl carrier protein    1.6.16 : Cellulose biosynthesis   1.7 : Central intermediary metabolism    1.7.1 : Unassigned reversible reactions    1.7.2 : Glyoxylate bypass    1.7.3 : Pentose phosphate shunt, non-oxidative branch    1.7.6 : Glycerol metabolism    1.7.7 : Galactose metabolism    1.7.8 : Gluconeogenesis    1.7.9 : Misc. glucose metabolism    1.7.10 : Sugar nucleotide biosynthesis, conversions    1.7.12 : Amino sugar conversions    1.7.13 : Amino acid conversion    1.7.14 : Polyamine biosynthesis    1.7.15 : 2'-deoxyribonucleotide/ribonucleoside metabolism    1.7.17 : Formyl-tetrahydrofolate biosynthesis    1.7.18 : Betaine biosynthesis    1.7.19 : Incorporation of metal ions    1.7.20 : S-adenosyl methionine biosynthesis    1.7.21 : Glyoxylate degradation    1.7.22 : Carnitine metabolism    1.7.23 : Methylglyoxal metabolism    1.7.24 : Cyanate catabolism    1.7.25 : Glycolate metabolism    1.7.26 : Allantoin assimilation    1.7.27 : Pyridoxal 5'-phosphate salvage    1.7.28 : Pyruvate catabolism    1.7.29 : Acetate catabolism    1.7.31 : Aminobutyrate catabolism    1.7.32 : Putrescine catabolism    1.7.33 : Nucleotide and nucleoside conversions    1.7.34 : Peptidoglycan (murein) turnover, recycling    1.7.35 : Lactate oxidation    1.7.36 : Trehalose biosynthesis    1.7.37 : C1 assimilation, serine pathway    1.7.38 : Methionine salvage pathway   1.8 : Metabolism of other compounds    1.8.1 : Phosphorous metabolism    1.8.2 : Sulfur metabolism    1.8.3 : Nitrogen metabolism 2 : Information transfer   2.1 : DNA related    2.1.1 : DNA replication    2.1.2 : DNA restriction/modification    2.1.3 : DNA recombination    2.1.4 : DNA repair    2.1.5 : DNA degradation   2.2 : RNA related    2.2.2 : Transcription related    2.2.3 : RNA modification    2.2.4 : RNA degradation    2.2.5 : tRNA    2.2.6 : rRNA, stable RNA    2.2.7 : Antisense RNA   2.3 : Protein related    2.3.1 : Amino acid-activation    2.3.2 : Translation    2.3.3 : Posttranslational modification    2.3.4 : Chaperoning, folding    2.3.5 : Export, signal peptide cleavage    2.3.6 : Turnover, degradation    2.3.7 : Nucleoproteins, basic proteins    2.3.8 : Ribosomal proteins    2.3.9 : Non-ribosomal peptide synthetase 3 : Regulation    3.1. : Type of regulation    3.1.1 : DNA structure level     3.1.1.1 : DNA bending, supercoiling, inversion     3.1.1.2 : Methylation    3.1.2 : Transcriptional level     3.1.2.1 : Sigma factors, anti-sigmafactors     3.1.2.2 : Activator     3.1.2.3 : Repressor     3.1.2.4 : Complex regulation      3.1.2.4.1 : More than one signal needed      3.1.2.4.2 : Regulons or multilayer component regulatory systems      3.1.2.4.3 : Two-component regulatory systems (external signal)      3.1.2.4.4 : Quorum sensing     3.1.2.5 : Action unknown    3.1.3 : Posttranscriptional     3.1.3.1 : Translation attenuation and efficiency     3.1.3.2 : Covalent modification, demodification, maturation     3.1.3.3 : Inhibition / activation of enzymes     3.1.3.4 : Proteases, cleavage of compounds     3.1.3.5 : Multilayer regulatory systems     3.1.3.6 : Antisense RNA    3.1.4 : Regulation level unknown   3.3 : Genetic unit regulated    3.3.1 : Operon (regulation of one operon)    3.3.2 : Regulon (a network of operons encoding related functions)    3.3.3 : Stimulon (ie. environmental stimulus)    3.3.4 : Global   3.4 : Trigger (some information added)   3.5 : Trigger modulation (some information added) 4 : Transport   4.1 : Channel-type Transporters     4.1.A. : alpha-type channels      4.1.A.1. : The Voltage-gated Ion Channel (VIC) Superfamily      4.1.A.8. : The Major Intrinsic Protein (MIP) Family     4.1.A.11 : The Chloride Channel (ClC) Family     4.1.B.17 : The Outer Membrane Factor (OMF) Family     4.1.A.22 : The Large Conductance Mechanosensitive Ion Channel (MscL) Family     4.1.A.23 : The Small Conductance Mechanosensitive Ion Channel (MscS) Family     4.1.A.46 : The H+- or Na+-translocating Bacterial Flagellar Motor (Mot) Family    4.1.B : Beta barrel porins (The Outer Membrane Porin (OMP) Functional Superfamily)     4.1.B.1 : The General Bacterial Porin (GBP) Family     4.1.B.3 : The Sugar Porin (SP) Family     4.1.B.9 : The FadL Outer Membrane Protein (FadL) Family     4.1.B.10 : The Nucleoside-specific Channel-forming Outer Membrane Porin (Tsx) Family     4.1.B.14 : The Outer Membrane Receptor (OMR) Family     4.1.B.21 : The OmpG Porin (OmpG) Family   4.2 : Electrochemical potential driven transporters     4.2.A. : Porters (Uni-, Sym- and Antiporters)     4.2.A.1 : The Major Facilitator Superfamily (MFS)     4.2.A.2 : The Glycoside-Pentoside-Hexuronide (GPH):Cation Symporter Family     4.2.A.3 : The Amino Acid-Polyamine-Choline (APC) Family     4.2.A.4 : The Cation Diffusion Facilitator (CDF) Family     4.2.A.6 : The Resistance-Nodulation-Cell Division (RND) Superfamily     4.2.A.7 : The Drug/Metabolite Transporter (DMT) Superfamily     4.2.A.8 : The Gluconate:H+ Symporter (GntP) Family     4.2.A.9 : The Cytochrome oxidase biogenesis (Oxa1) Family     4.2.A.10 : The 2-Keto-3-Deoxygluconate Transporter (KDGT) Family     4.2.A.13 : The C4-Dicarboxylate Uptake (Dcu) Family     4.2.A.14 : The Lactate Permease (LctP) Family     4.2.A.15 : The Betaine/Carnitine/Choline Transporter (BCCT) Family     4.2.A.16 : The Telurite-resistance/Dicarboxylate Transporter (TDT) Family     4.2.A.17 : The Proton-dependent Oligopeptide Transporter (POT) Family     4.2.A.19 : The Ca2+:Cation Antiporter (CaCA) Family     4.2.A.20 : The Inorganic Phosphate Transporter (PiT) Family     4.2.A.21 : The Solute:Sodium Symporter (SSS) Family     4.2.A.23 : The Dicarboxylate/Amino Acid:Cation (Na+ or H+) Symporter (DAACS) Family     4.2.A.25 : The Alanine/Glycine:Cation symporter (AGCS) Family     4.2.A.26 : The Branched Chain Amino Acid:Cation Symporter (LIVCS) Family     4.2.A.27 : The Glutamate:Na+ Symporter (GltS) Family     4.2.A.33 : The NhaA Na+:H+ Antiporter (NhaA) Family     4.2.A.34 : The NhaB Na+:H+ Antiporter (NhaB) Family     4.2.A.36 : The Monovalent Cation:Proton Antiporter-1 (CPA1) Family     4.2.A.37 : The Monovalent Cation:Proton Antiporter-2 (CPA2) Family     4.2.A.38 : The K+ Transporter (Trk) Family     4.2.A.39 : The Nucleobase:Cation Symporter-1 (NCS1) Family     4.2.A.40 : The Nucleobase:Cation Symporter-2 (NCS2) Family     4.2.A.41 : The Concentrative Nucleoside Transporter (CNT) Family     4.2.A.42 : The Hydroxy/Aromatic Amino Acid Permease (HAAAP) Family     4.2.A.44 : The Formate-Nitrite Transporter (FNT) Family     4.2.A.45 : The Metal Ion Transporter (MIT) Family     4.2.A.47 : The Divalent Anion:Na+ Symporter (DASS) Family     4.2.A.49 : The Ammonium Transporter (Amt) Family     4.2.A.53 : The Sulfate Permease (SulP) Family     4.2.A.55 : The Manganese (Nramp) Fam.     4.2.A.58 : The Phosphate:Na+ Symporter (PNaS) Family     4.2.A.61 : The C4-dicarboxylate Uptake C (DcuC) Family     4.2.A.64 : The Type V Secretory Pathway or Twin Arginine Targeting (Tat) Family     4.2.A.66 : The Multi Antimicrobial Extrusion (MATE) Family     4.2.A.68 : The p-Aminobenzoyl-glutamate Transporter (AbgT) Family     4.2.A.69 : The Auxin Efflux Carrier (AEC) Family     4.2.A.72 : The K+ uptake permease (KUP) family     4.2.A.75 : The L-lysine exporter (LysE) family     4.2.A.76 : The Resistance to Homoserine/Threonine (RhtB) Family    4.2.C : Ion-gradient driven energizers     4.2.C.1 : TonB Family of Auxiliary Proteins for Energization of OMR-mediated Transport   4.3 : Primary Active Transporters     4.3.A. : Pyrophosphate Bond (ATP; GTP; P2) Hydrolysis-driven Active Transporters     4.3.A.1 : The ATP-binding Cassette (ABC) Superfamily + ABC-type Uptake Permeases      4.3.A.1.a : ATP binding component      4.3.A.1.m : membrane component      4.3.A.1.p : periplasmic binding component      4.3.A.1.am : ATP binding and membrane component     4.3.A.2 : The H+/Na+-translocating F-, V- and A-type ATPase (F-ATPase) Superfamily     4.3.A.3 : The P-type ATPase (P-ATPase) Superfamily     4.3.A.4 : The Arsenite-Antimonite (Ars) Efflux Family     4.3.A.5 : The Type II (General) Secretory Pathway (IISP) Family     4.3.A.6 : The Type III (Virulence-related) Secretory Pathway (IIISP) Family     4.3.A.7 : The Type IV (Conjugal DNA-Protein Transfer) Secretory Pathway (IVSP) Family     4.3.D. : Oxidoreduction-driven Active Transporters     4.3.D.1 : The Proton- or sodium ion-translocating NADH Dehydrogenase (NDH) Family     4.3.D.4 : The Proton-translocating Cytochrome Oxidase (COX) Superfamily   4.4 : Group Translocators    4.4.A : Phosphotransferase Systems (PEP-dependent PTS)     4.4.A.1 : The PTS Glucose-Glucoside (Glc) Family     4.4.A.2 : The PTS Fructose-Mannitol (Fru) Family     4.4.A.3 : The PTS Lactose-N,N'-Diacetylchitobiose-betaucoside (Lac) Family     4.4.A.4 : The PTS Glucitol (Gut) Family     4.4.A.5 : The PTS Galactitol (Gat) Family     4.4.A.6 : The PTS Mannose-Fructose-Sorbose (Man) Family    4.8.A : Accessory Factors Involved in Transport     4.8.A.1 : The Membrane Fusion Protein (MFP) Family     4.8.A.2 : The Secretin Auxiliary Lipoprotein (SAL) Family     4.8.A.3 : MPA1 Family auxillary transport protein     4.8.A.7 : The Phosphotransferase System Enzyme I (EI) Family     4.8.A.8 : The Phosphotransferase System HPr (HPr) Family    4.9.A : Transporters of Unknown Classification     4.9.A.1 : The Polysaccharide Transporter (PST) Family     4.9.A.4 : The Nicotinamide Mononucleotide (NMN) Uptake Permease (PnuC) Family     4.9.A.8 : The Ferrous Iron Uptake (FeoB) Family     4.9.A.13 : The Short Chain Fatty Acid Transporter (scFAT) Family     4.9.A.16 : The Septal DNA Translocator (SDT) Family     4.9.A.17 : The Metal Ion Transporter (MIT) Family    4.9.B : Putative uncharacterized transport protein     4.9.B.3 : The Putative Bacterial Murein Precursor Exporter (MPE) Family     4.9.B.4 : The Putative Efflux Transporter (PET) Family     4.9.B.6 : The Toxic Hok/Gef Protein (Hok/Gef) Family     4.9.B.10 : The 6TMS Putative MarC Transporter (MarC) Family     4.9.B.18 : The SecDF-associated Single Transmembrane Protein (SSTP) Family     4.9.B.21 : The Frataxin (Frataxin) Family     4.9.B.22 : The Putative Permease (PerM) Family     4.9.B.24 : The Testis-Enhanced Gene Transfer (TEGT) Family     4.9.B.25 : The YbbM (YbbM) Family     4.9.B.27 : The YdjX-Z (YdjX-Z) Family     4.9.B.28 : The YqaE (YqaE) Family     4.9.B.29 : The YebN (YebN) Family     4.9.B.31 : The YqiH (YqiH) Family     4.9.B.32 : The Putative Vectorial Glycosyl Polymerization (VGP) Family   4.S : substrate    4.S.1 : (D)-glucarate/galactarate    4.S.10 : allose/ribose    4.S.100 : L-arabinose    4.S.101 : L-arabinose /H+    4.S.102 : L-arabinose/ isopropyl-beta-D-thiogalactopyranoside    4.S.103 : L-asparagine    4.S.104 : lipooligosaccharides    4.S.105 : lipopolysaccharide    4.S.106 : lipoprotein    4.S.107 : L-lactate    4.S.108 : L-leucine/L-valine/L-iso-leucine    4.S.109 : L-rhamnose/H+    4.S.11 : alpha-ketoglutarate    4.S.110 : L-threonine/L-serine    4.S.111 : lysine    4.S.112 : lysine/arginine/ornithine    4.S.113 : maltose    4.S.114 : maltose/maltodextrin    4.S.115 : mannitol    4.S.116 : mannose    4.S.117 : mellobiose    4.S.118 : methionine    4.S.119 : methylgalactoside/galactose    4.S.12 : amino acid    4.S.120 : Mg++    4.S.121 : Mg2+/Ni2+/Co2+    4.S.122 : microcin B17    4.S.123 : Mn+/H+    4.S.124 : molybdate    4.S.125 : molybdenum    4.S.126 : multidrug    4.S.127 : multidrug/bicyclomycin    4.S.128 : muropeptide    4.S.129 : myo-inositor    4.S.13 : amino acid/amide    4.S.130 : Na+    4.S.131 : Na+/ alanine/glycine    4.S.132 : Na+/ H+    4.S.133 : Na+/Ca+    4.S.134 : Na+/dicarboxylate    4.S.135 : Na+/glutamate/aspartate    4.S.136 : Na+/H+    4.S.137 : Na+/leucine/valine/iso-leucine    4.S.138 : Na+/pantothenate    4.S.139 : Na+/proline    4.S.14 : ammonium    4.S.140 : Na+/serine/threonine    4.S.141 : N-acetylgalactosamine    4.S.142 : N-acetylglucosamine    4.S.143 : Ni++    4.S.144 : nicotinamide mononucleotide    4.S.145 : nitrite    4.S.146 : nucleoside    4.S.147 : nucleoside/H+    4.S.148 : oligopeptide    4.S.149 : oligopeptides    4.S.15 : antibiotic    4.S.150 : p-aminobenzoyl-glutamate    4.S.151 : Pb/Cd/Zn/Hg    4.S.152 : peptide    4.S.153 : phenylalanine    4.S.154 : phenylalanine/ tyrosine    4.S.155 : phosphate    4.S.156 : polymyxin    4.S.157 : potassium    4.S.158 : proline    4.S.159 : proline/betaine    4.S.16 : arabinose polymer    4.S.160 : protein    4.S.161 : protein/DNA    4.S.162 : purine/xanthine    4.S.163 : putrescine    4.S.164 : putrescine/ornithine    4.S.165 : putrescine/ornitine    4.S.166 : putrescine/spermidine    4.S.167 : serine    4.S.168 : shikimate/dehydroshikimate    4.S.169 : sialic acid    4.S.17 : arginine    4.S.170 : S-methylmethionine    4.S.171 : spermidine/putrescine    4.S.172 : sucrose    4.S.173 : sugar    4.S.174 : sulfate    4.S.175 : taurine    4.S.176 : tellurite    4.S.177 : thiamine    4.S.178 : thiosulfate    4.S.179 : thiosulfate/sulfate    4.S.18 : arginine/ornitine    4.S.180 : threonine    4.S.181 : trehalose    4.S.182 : tripeptide    4.S.183 : tryptophan    4.S.184 : tyrosine    4.S.185 : uracil    4.S.186 : urasil    4.S.187 : vitamin B12    4.S.188 : water    4.S.189 : xanthosine    4.S.19 : arsenite    4.S.190 : xylose/H+    4.S.191 : Zn    4.S.192 : chrysobactin    4.S.193 : achromobactin    4.S.2 : 2-keto-3-deoxy-D-gluconate    4.S.20 : benzoate    4.S.21 : beta-galactosidase/lactose and glucose    4.S.22 : beta-glucoside    4.S.23 : betaine/choline/glycine    4.S.24 : betaine/choline/glycine transport protein    4.S.25 : Ca+/ H+    4.S.26 : cadaverine/lysine    4.S.27 : carnitine    4.S.28 : cation    4.S.29 : cellobiose/arbutin/salicin    4.S.3 : 3-hydroxyphenylpropionic acid    4.S.30 : cellobiose/salicin/arbutin    4.S.31 : chloramphenicol    4.S.32 : chloride    4.S.33 : choline    4.S.34 : citrate/succinate    4.S.35 : colicin4    4.S.36 : Cu    4.S.37 : curli subunit    4.S.38 : cyanate    4.S.39 : cysteine    4.S.4 : 3-phenylpropionic acid    4.S.40 : cysteine/O-acetyl-L-serine/cysteine metabolites    4.S.41 : cytosine    4.S.42 : D-alanine/D-serine/glycine    4.S.43 : D-galactonate    4.S.44 : D-glucarate    4.S.45 : D-glucose/trehalose    4.S.46 : dicarboxylate    4.S.47 : dipeptide    4.S.48 : D-ribose    4.S.49 : drug    4.S.5 : alkanesulfonate    4.S.50 : D-xylose    4.S.51 : enterochelin    4.S.52 : fatty acid    4.S.53 : Fe    4.S.54 : Fe++    4.S.55 : ferric dicitrate    4.S.56 : ferric enterobactin    4.S.57 : ferric hydroxamate    4.S.58 : ferrichrome    4.S.59 : formate    4.S.6 : alkanesulphonate    4.S.60 : formate/oxalate    4.S.61 : fosfidomycin/H+    4.S.62 : frucose    4.S.63 : fructose    4.S.64 : fucose    4.S.65 : galactitol    4.S.66 : galactose/H+    4.S.67 : gamma-aminobutyrate    4.S.68 : glucitol/sorbitol    4.S.69 : gluconate    4.S.7 : alklphosphonate    4.S.70 : gluconate/L-idonate    4.S.71 : glucose    4.S.72 : glucose/maltose    4.S.73 : glucuronide    4.S.74 : glutamate/aminobutyric acid    4.S.75 : glutamate/aspartate    4.S.76 : glutamine    4.S.77 : glycerol    4.S.78 : glycerol-3-P    4.S.79 : glycine betaine choline transport    4.S.8 : alkylphosphonate    4.S.80 : glycine/betaine/proline    4.S.81 : group A colicins    4.S.82 : H+    4.S.83 : H+/acridine    4.S.84 : H+/lactose/glucose    4.S.85 : heme    4.S.86 : hexose phosphate    4.S.87 : hexuronate    4.S.88 : histidine    4.S.89 : histidine/lysine/arginine/ornithine    4.S.9 : allantoin/ion    4.S.90 : homoserine/lactone    4.S.91 : hydrophilic molecule    4.S.92 : hydrophilic molecules    4.S.93 : ion    4.S.94 : ions    4.S.95 : iron dicitrate    4.S.96 : K+    4.S.97 : K+/H+    4.S.98 : lactate    4.S.99 : lactose 5 : Cell processes   5.1 : Cell division   5.2 : Cell cycle physiology   5.3 : Motility (incl. chemotaxis, energytaxis, aerotaxis, redoxtaxis)   5.4 : Genetic exchange, recombination   5.5 : Adaptation to stress    5.5.1 : Osmotic pressure    5.5.2 : Temperature extremes    5.5.3 : Starvation response    5.5.4 : pH response    5.5.5 : Dessication    5.5.6 : Other stresses (mechanical, nutritional, oxidative)    5.5.7 : Fe aquisition   5.6 : Protection    5.6.1 : Radiation    5.6.2 : Detoxification (xenobiotic metabolism)    5.6.3 : Cell killing    5.6.4 : Drug resistance/sensitivity   5.8 : SOS response   5.10 : Defense/survival   5.11 : DNA uptake   5.12 : Biofilm production   5.13 : Virulence associated 6 : Cell structure   6.1 : Membrane   6.2 : Peptidoglycan (murein)   6.3 : Surface antigens (ECA, O antigen of LPS)   6.4 : Flagellum   6.5 : Pilus   6.6 : Ribosome   6.7 : Capsule (M and K antigens) 7 : Location of gene products   7.1 : Cytoplasm   7.2 : Periplasmic space   7.3 : Inner membrane   7.4 : Outer membrane   7.5 : Extracellular 8 : extrachromosomal   8.1 : Prophage genes and phage related functions    8.1.1 : DNA packaging, phage assembly    8.1.2 : Replication    8.1.3 : Regulation    8.1.4 : Integration, recombination    8.1.5 : Lysis    8.1.6 : Structural component   8.2 : Plasmid related    8.2.1 : replication and maintenance    8.2.2 : plasmid transfer   8.3 : Transposon related    8.3.1 : transposases    8.3.2 : regulation of mobility   8.4 : Colicin related 9 : DNA sites 10 : cryptic genes