Comparative Genomics

Label	Gene	Product	EC number	MCC rank	MCC	Distance rank	Distance	Rank	Correlation score	NbOrgInSynt
ACIAD3680	trmE	GTPase involved in tRNA modification and in thiophene and furan oxidation		4	0.954	106	0.998	2	0.855	0
ACIAD0211	def	peptide deformylase 1 (N-formylmethionylaminoacyl-tRNA deformylase, binds Zn(II))	3.5.1.88	15	0.912	1	1.000	3	0.821	0
ACIAD2440	mnmG	tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG		23	0.888	1	1.000	4	0.799	0
ACIAD3228		putative GTPase, involved in coordination of cell cycle (EngB)		21	0.893	291	0.990	5	0.787	0
ACIAD3038	rho	transcription termination factor		30	0.876	106	0.998	6	0.785	0
ACIAD1378		putative outer membrane protein		1	1.000	1645	0.934	7	0.785	0
ACIAD1311	rpoH	sigma H (sigma 32) factor of RNA polymerase		8	0.937	1145	0.954	8	0.768	0
ACIAD2641	lolC	transport protein of outer membrane lipoproteins (ABC superfamily, membrane)		2	0.994	1911	0.922	9	0.761	0
ACIAD2372	surA	peptidyl-prolyl cis-trans isomerase	5.2.1.8	29	0.881	573	0.977	10	0.757	0
ACIAD2465		conserved hypothetical protein		13	0.920	1145	0.954	11	0.755	0
ACIAD0657	rpoN	RNA polymerase sigma-54 factor		10	0.930	1435	0.945	12	0.748	0
ACIAD0589		putative SecYEG protein translocase auxillary subunit (YajC)		5	0.951	1618	0.935	13	0.748	0
ACIAD2371	ostA	organic solvent tolerance protein precursor or increased membrane permeability protein		12	0.922	1435	0.945	14	0.741	0
ACIAD0894	minD	cell division inhibitor, a membrane ATPase,activates minC		18	0.903	1145	0.954	15	0.740	0
ACIAD3361	mrcA	penicillin binding protein	2.4.1.129, 3.4.-.-	7	0.941	1618	0.935	16	0.740	0
ACIAD2002	kdsA	2-dehydro-3-deoxyphosphooctonate aldolase	2.5.1.55	54	0.819	1	1.000	17	0.737	0
ACIAD1500	mutS	methyl-directed mismatch repair, recognize exocyclic adducts of guanosine		52	0.823	106	0.998	18	0.737	0
ACIAD3479	kdtA	3-deoxy-D-manno-2-octulosonate transferase	2.-.-.-	3	0.960	1911	0.922	19	0.735	0
ACIAD2348	cmk	cytidylate kinase (cytidine monophosphate (CMP) kinase)	2.7.4.25	51	0.825	291	0.990	20	0.727	0
ACIAD2346	himD	integration host factor (IHF),beta subunit, site specific recombination		26	0.885	1145	0.954	21	0.726	0
ACIAD1409	ppiD	peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase)	5.2.1.8	19	0.898	1435	0.945	22	0.722	0
ACIAD2362	kdsB	3-deoxy-manno-octulosonate cytidylyltransferase	2.7.7.38	6	0.947	2053	0.918	23	0.719	0
ACIAD0273	dksA	DnaK suppressor protein		31	0.875	1145	0.954	24	0.717	0
ACIAD1368	glnG	response regulator in two-component regulatory system with GlnL, nitrogen regulation (EBP family)		9	0.937	1989	0.920	25	0.714	0
ACIAD3512	ftsA	cell division protein		32	0.868	1145	0.954	26	0.712	0
ACIAD0438	rne	ribonuclease E (RNase E): endoribonuclease for rRNA processing and mRNA degradation	3.1.4.-	17	0.904	1645	0.934	27	0.710	0
ACIAD2640	lolD	transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind)		34	0.866	1251	0.953	28	0.709	0
ACIAD2898		putative competence protein (ComL)		11	0.924	1911	0.922	29	0.707	0
ACIAD3040	himA	integration host factor (IHF), alpha subunit, DNA-binding protein, DNA replication		36	0.859	1145	0.954	30	0.704	0
ACIAD2623	pal	peptidoglycan-associated lipoprotein precursor		16	0.905	2053	0.918	31	0.687	0
ACIAD3122	secB	molecular chaperone in protein export		20	0.897	1989	0.920	32	0.684	0
ACIAD2265		putative rare lipoprotein A family (RlpA-like)		66	0.795	669	0.975	33	0.680	0
ACIAD0590	tgt	queuine tRNA-ribosyltransferase (tRNA-guanine transglycosylase) (Guanine insertion enzyme)	2.4.2.29	25	0.887	1911	0.922	34	0.679	0
ACIAD3132		putative intracellular septation protein (IspZ)		63	0.799	795	0.971	35	0.678	0
ACIAD2363	lpxK	tetraacyldisaccharide 4'-kinase (Lipid A 4'-kinase)	2.7.1.130	27	0.884	1911	0.922	36	0.677	0
ACIAD0869	rpmF	50S ribosomal protein L32		104	0.752	1	1.000	37	0.677	0
ACIAD2854	ftsJ	cell division protein (filamentous temperature sensitivity, 23S rRNA U2552 ribose 2'-O-methyltransferase, SAM-dependent)	2.1.1.-	47	0.833	1402	0.949	38	0.676	0
ACIAD3503	guaB	IMP dehydrogenase	1.1.1.205	44	0.841	1435	0.945	39	0.676	0
ACIAD1482	kdsD	D-arabinose 5-phosphate isomerase	5.3.1.13	14	0.918	2372	0.900	40	0.669	0
ACIAD2373	hfq	host factor I for bacteriophage Q beta replication, a growth-related protein		33	0.867	1911	0.922	41	0.664	0
ACIAD2313		putative nucleoid-associated protein (YbaB like)		109	0.743	291	0.990	42	0.655	0
ACIAD1225	dacC	D-ala-D-ala-carboxypeptidase; penicillin-binding protein 5 (precursor)	3.4.16.4	22	0.891	2264	0.904	43	0.655	0
ACIAD3157		putative lytic murein transglycosylase, soluble (Slt)	3.2.1.-	41	0.848	1854	0.923	44	0.651	0
ACIAD2418	prfA	peptide chain release factor 1		132	0.724	1	1.000	45	0.651	0
ACIAD1381	fabZ	(3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase	4.2.1.-	57	0.810	1435	0.945	46	0.651	0
ACIAD2862	greA	transcription elongation factor, cleaves 3' nucleotide of paused mRNA		138	0.719	1	1.000	47	0.648	0
ACIAD0442	rluC	23S rRNA pseudouridylate synthase	4.2.1.70	42	0.846	1911	0.922	48	0.648	0
ACIAD2937	lolA	outer-membrane lipoproteins carrier protein		43	0.843	1854	0.923	49	0.647	0
ACIAD3514	ftsQ	cell division protein (in growth of wall at septum)		38	0.851	2042	0.919	50	0.647	0
ACIAD2939	rplU	50S ribosomal protein L21		123	0.733	291	0.990	51	0.646	0
ACIAD2402		conserved hypothetical protein		77	0.783	1108	0.958	52	0.646	0
ACIAD2875	sucB	dihydrolipoamide succinyltransferase, E2 component of 2-oxoglutarate dehydrogenase complex	2.3.1.61	37	0.858	2108	0.913	53	0.644	0
ACIAD0734	nuoE	NADH dehydrogenase I chain E	7.1.1.2	75	0.784	1145	0.954	54	0.643	0
ACIAD2619	tolQ	tolerance to group A colicins, single-stranded DNA filamentous phage, required for OM integrity		24	0.888	2462	0.896	55	0.641	0
ACIAD1485		putative lipopolysaccharide transport protein A (ABC superfamily, peri_bind) (LptA)		46	0.836	1911	0.922	56	0.640	0
ACIAD0872	acpP	acyl carrier protein (ACP)		152	0.709	1	1.000	57	0.638	0
ACIAD3548	dsbB	disulfide bond formation protein (Disulfide oxidoreductase)		49	0.832	1911	0.922	58	0.637	0
ACIAD0829		putative Maf-like protein		50	0.831	1911	0.922	59	0.636	0
ACIAD1322		putative membrane protein required for colicin V production (CvpA)		48	0.832	1989	0.920	60	0.635	0
ACIAD1232		putative glutaredoxin-like protein (grxD-like)		76	0.783	1402	0.949	61	0.635	0
ACIAD2876	sucA	2-oxoglutarate decarboxylase E1 component of the 2-oxoglutarate dehydrogenase complex	1.2.4.2	155	0.707	106	0.998	62	0.634	0
ACIAD0588	secD	preprotein translocase, IISP family, part of the channel		71	0.786	1435	0.945	63	0.632	0
ACIAD2599	dapD	2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase	2.3.1.117	89	0.770	1145	0.954	64	0.631	0
ACIAD1996	ispF	2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	4.6.1.12	61	0.802	1645	0.934	65	0.630	0
ACIAD1229	nlpD	lipoprotein precursor		53	0.821	1911	0.922	66	0.629	0
ACIAD0735	nuoF	NADH dehydrogenase I chain F	7.1.1.2	93	0.767	1145	0.954	67	0.629	0
ACIAD0409	priA	primosomal protein N' (= factor Y) directs replication fork assembly at D-loops, ATP-dependent.		130	0.725	438	0.980	68	0.628	0
ACIAD0063	ampD	N-acetyl-anhydromuramyl-L-alanine amidase (Regulates ampC)		40	0.848	2220	0.907	69	0.628	0
ACIAD0432		putative heme chaperone HemW like		82	0.774	1402	0.949	70	0.627	0
ACIAD0561	ispG	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase		116	0.738	832	0.970	71	0.625	0
ACIAD3202	rpsE	30S ribosomal protein S5		169	0.694	1	1.000	72	0.625	0
ACIAD0825	mreB	rod shape-determining protein		65	0.795	1645	0.934	73	0.624	0
ACIAD3510	lpxC	UDP-3-O-acyl-N-acetylglucosamine deacetylase	3.5.1.-	55	0.814	1911	0.922	74	0.623	0
ACIAD2618		putative Acyl-CoA thioester hydrolase	3.1.2.-	35	0.866	2521	0.892	75	0.621	0
ACIAD2433	dnaB	replicative DNA helicase;chromosome replication, chain elongation		176	0.690	1	1.000	76	0.621	0
ACIAD0353		protein of unknown function UPF0301		69	0.791	1645	0.934	77	0.621	0
ACIAD3574	pgpA	phosphatidylglycerophosphatase A	3.1.3.27	70	0.790	1645	0.934	78	0.620	0
ACIAD3158		putative tRNA-i(6)A37 modification enzyme (MiaB)		181	0.688	106	0.998	79	0.617	0
ACIAD3149	pssA	phosphatidylserine synthase	2.7.8.8	144	0.714	438	0.980	80	0.617	0
ACIAD2881	sdhD	succinate dehydrogenase, hydrophobic subunit	1.-.-.-	99	0.754	1251	0.953	81	0.617	0
ACIAD2589		conserved hypothetical protein; putative periplasmic solute-binding protein		60	0.804	1854	0.923	82	0.617	0
ACIAD2838	groEL	chaperone Hsp60, peptide-dependent ATPase, heat shock protein		188	0.684	1	1.000	83	0.616	0
ACIAD0296	gph	phosphoglycolate phosphatase, contains a phophatase-like domain	3.1.3.18	135	0.722	746	0.972	84	0.614	0
ACIAD1920	glnS	glutaminyl-tRNA synthetase	6.1.1.18	62	0.800	1911	0.922	85	0.613	0
ACIAD1246		putative cytochrome		59	0.804	1989	0.920	86	0.613	0
ACIAD0895	minC	cell division inhibitor, inhibits ftsZ ring formation		127	0.728	915	0.967	87	0.613	0
ACIAD1265	clpB	ATP-dependent protease, Hsp 100, part of multi-chaperone system with DnaK, DnaJ, and GrpE		158	0.706	374	0.981	88	0.612	0
ACIAD0234	parC	DNA topoisomerase IV, subunit A	5.99.1.-	28	0.883	2670	0.876	89	0.610	0
ACIAD1646	putA	bifunctional protein [Includes: proline dehydrogenase (Proline oxidase); delta-1-pyrroline-5-carboxylate dehydrogenase (P5C dehydrogenase)]	1.5.5.2, 1.2.1.88	192	0.679	106	0.998	90	0.609	0
ACIAD1132		conserved hypothetical protein		87	0.771	1521	0.936	91	0.608	0
ACIAD0870	fabD	malonyl-CoA-[acyl-carrier-protein] transacylase	2.3.1.39	86	0.772	1618	0.935	92	0.607	0
ACIAD2041	ruvC	holliday junction nuclease		88	0.770	1645	0.934	93	0.605	0
ACIAD1405	iscR	repressor of the iscRSUA operon, involved in assembly of Fe-S clusters		67	0.794	1989	0.920	94	0.605	0
ACIAD0300	secE	preprotein translocase IISP family, membrane subunit		146	0.713	795	0.971	95	0.605	0
ACIAD3139		putative acyl-CoA thioester hydrolase	3.1.2.-	118	0.736	1145	0.954	96	0.604	0
ACIAD1483	kdsC	3-Deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) phosphatase	3.1.3.45	90	0.769	1645	0.934	97	0.604	0
ACIAD2622	tolB	tolerance to colicins E2, E, A, and K, required for OM integrity		94	0.763	1521	0.936	98	0.602	0
ACIAD2284		putative ribosomal RNA small subunit methyltransferase E (rsmE)	2.1.1.-	161	0.704	669	0.975	99	0.602	0
ACIAD3500	recJ	ssDNA exonuclease, 5' --> 3' specific , Mg dependent	3.1.-.-	73	0.785	1911	0.922	100	0.601	0
ACIAD1380	lpxD	UDP-3-O-[3-hydroxylauroyl] glucosamine N-acyltransferase	2.3.1.-	78	0.782	1911	0.922	101	0.599	0
ACIAD0736	nuoG	NADH dehydrogenase I chain G	7.1.1.2	125	0.730	1145	0.954	102	0.599	0
ACIAD2361	holB	DNA polymerase III, delta prime subunit	2.7.7.7	126	0.730	1145	0.954	103	0.598	0
ACIAD2431	rpsR	30S ribosomal protein S18		208	0.666	106	0.998	104	0.597	0
ACIAD1922	lpxH	UDP-2,3-diacylglucosamine hydrolase	3.6.1.-	80	0.779	1911	0.922	105	0.597	0
ACIAD3189		conserved hypothetical protein		96	0.758	1521	0.936	106	0.597	0
ACIAD3325	rpoZ	RNA polymerase, omega subunit	2.7.7.6	164	0.699	707	0.974	107	0.597	0
ACIAD3012	rplM	50S ribosomal protein L13		178	0.690	438	0.980	108	0.596	0
ACIAD1402	iscA	iron-binding protein , believed to be involved in Fe-S protein formation or repair		121	0.735	1402	0.949	109	0.596	0
ACIAD2403		conserved hypothetical protein; putative outer membrane protein		173	0.692	573	0.977	110	0.595	0
ACIAD2324	lpxB	lipid A-disaccharide synthase	2.4.1.182	81	0.778	1911	0.922	111	0.595	0
ACIAD2561		putative GTP-binding protein (Obg)		222	0.659	1	1.000	112	0.593	0
ACIAD1382	lpxA	UDP-acetylglucosamine acyltransferase	2.3.1.129	83	0.773	1911	0.922	113	0.592	0
ACIAD0252	holC	DNA polymerase III, chi subunit	2.7.7.7	84	0.773	1911	0.922	114	0.592	0
ACIAD3368	mraW	Ribosomal RNA small subunit methyltransferase H	2.1.1.-	228	0.657	1	1.000	115	0.591	0
ACIAD0591	queA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine biosynthesis protein )	5.-.-.-	105	0.750	1618	0.935	116	0.590	0
ACIAD0255		putative lipopolysaccharide permease		108	0.747	1618	0.935	117	0.587	0
ACIAD1738	aroQ	3-dehydroquinate dehydratase, type II	4.2.1.10	239	0.649	1	1.000	118	0.584	0
ACIAD0316	htpG	chaperone Hsp90, heat shock protein C 62.5		151	0.709	1145	0.954	119	0.582	0
ACIAD3085	dusA	tRNA-dihydrouridine synthase A		95	0.759	1911	0.922	120	0.581	0
ACIAD0828	mreD	rod shape-determining protein		219	0.659	291	0.990	121	0.581	0
ACIAD3015	sspB	stringent starvation protein B		112	0.739	1645	0.934	122	0.580	0
ACIAD0402	pnp	polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase)	2.7.7.8	201	0.671	438	0.980	123	0.580	0
ACIAD3544	parE	topoisomerase IV subunit B	5.99.1.-	45	0.839	2670	0.876	124	0.580	0
ACIAD2620	tolR	tolerance to group A colicins, single-stranded DNA filamentous phage, required for OM integrity		64	0.795	2421	0.898	125	0.577	0
ACIAD1328		conserved hypothetical protein; putative signal peptide		72	0.785	2264	0.904	126	0.577	0
ACIAD0909	smpA	outer membrane lipoprotein		74	0.784	2264	0.904	127	0.577	0
ACIAD2553	folD	bifunctional protein [Includes: 5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolase]	1.5.1.5, 3.5.4.9	165	0.698	1108	0.958	128	0.576	0
ACIAD2375	mutL	enzyme in methyl-directed mismatch repair, stimulates binding of Vsr and MutS to heteroduplex DNA		143	0.717	1435	0.945	129	0.576	0
ACIAD0384	ubiE	S-adenosylmethionine : 2-DMK methyltransferase and 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase	2.1.1.-	102	0.753	1911	0.922	130	0.576	0
ACIAD3560	psd	phosphatidylserine decarboxylase	4.1.1.65	122	0.734	1645	0.934	131	0.576	0
ACIAD2968	ispA	geranyltranstransferase (farnesyldiphosphate synthase) (FPP synthase)	2.5.1.10	117	0.737	1747	0.932	132	0.575	0
ACIAD2347	rpsA	30S ribosomal protein S1		261	0.639	1	1.000	133	0.575	0
ACIAD2000		putative cell division protein (FtsB-like)		106	0.749	1854	0.923	134	0.575	0
ACIAD1253	alaS	alanyl-tRNA synthetase	6.1.1.7	259	0.640	106	0.998	135	0.574	0
ACIAD3449	ssb	ssDNA-binding protein controls activity of RecBCD nuclease		210	0.663	438	0.980	136	0.574	0
ACIAD2446	fis	DNA-binding protein for site-specific recombination, transcription of rRNA and tRNA operons and DNA replication		156	0.707	1402	0.949	137	0.573	0
ACIAD0788	pilI	twitching motility protein		128	0.727	1521	0.936	138	0.573	0
ACIAD0587	secF	preprotein translocase, IISP family, membrane subunit		110	0.743	1815	0.926	139	0.573	0
ACIAD1486		putative lipopolysaccharide transport protein B (ABC superfamily, atp_bind) (LptB)		147	0.711	1435	0.945	140	0.572	0
ACIAD0648	secA	preprotein translocase, secretion protein of IISP family		166	0.697	1145	0.954	141	0.572	0
ACIAD2943		putative RND multidrug efflux membrane fusion protein MexA precursor		79	0.781	2321	0.901	142	0.570	0
ACIAD2214		putative transporter		195	0.678	972	0.966	143	0.569	0
ACIAD0791	dapE	succinyl-diaminopimelate desuccinylase	3.5.1.18	217	0.660	516	0.978	144	0.569	0
ACIAD3518	gshB	glutathione synthetase	6.3.2.3	131	0.725	1645	0.934	145	0.569	0
ACIAD0659		putative toluene tolerance protein Ttg2F		163	0.700	1402	0.949	146	0.568	0
ACIAD3212	rplP	50S ribosomal protein L16		284	0.631	1	1.000	147	0.568	0
ACIAD3365	murE	UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase	6.3.2.13	157	0.707	1435	0.945	148	0.568	0
ACIAD1227	surE	5'(3')-nucleotidase	3.1.3.5, 3.1.3.6	139	0.719	1521	0.936	149	0.567	0
ACIAD2927	lipB	lipoate-protein ligase B (Lipoate biosynthesis protein B)	6.-.-.-	292	0.627	1	1.000	150	0.564	0
ACIAD1400	hscB	co-chaperone protein (Hsc20), believed to be involved in assembly of Fe-S clusters		171	0.694	1402	0.949	151	0.563	0
ACIAD0790	chpA	component of chemotactic signal transduction system		137	0.721	1747	0.932	152	0.563	0
ACIAD1101	pbpA	penicillin-binding protein 2		288	0.629	1435	0.945	153	0.562	7
ACIAD0484	lpxP	Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (Heat shock protein B)	2.3.1.-	114	0.739	2053	0.918	154	0.561	0
ACIAD3311	trmD	tRNA (guanine-1-)-methyltransferase.	2.1.1.-	270	0.635	291	0.990	155	0.560	0
ACIAD3018		putative lipoprotein precursor (VacJ) transmembrane		58	0.808	2660	0.877	156	0.559	0
ACIAD3042	pheS	phenylalanyl-tRNA synthetase, alpha-subunit	6.1.1.20	304	0.620	1	1.000	157	0.558	0
ACIAD2652	gyrA	DNA gyrase, subunit A, type II topoisomerase	5.6.2.2	301	0.622	106	0.998	158	0.558	0
ACIAD1385	recA	DNA strand exchange and recombination protein with protease and nuclease activity.		224	0.658	795	0.971	159	0.558	0
ACIAD0254		putative lipopolysaccharide permease		85	0.773	2462	0.896	160	0.558	0
ACIAD2261	queF	NADPH-dependent 7-cyano-7-deazaguanine reductase (NADPH-dependent nitrile oxidoreductase)	1.7.1.-	91	0.768	2421	0.898	161	0.557	0
ACIAD1369	glnL	sensory kinase (soluble) in two-component regulatory system		92	0.768	2421	0.898	162	0.557	0
ACIAD3585	dapA	4-hydroxy-tetrahydrodipicolinate synthase	4.3.3.7	302	0.622	106	0.998	163	0.557	0
ACIAD2938	rpmA	50S ribosomal protein L27		311	0.617	1	1.000	164	0.556	0
ACIAD2578	recO	DNA repair protein		129	0.726	1911	0.922	165	0.556	0
ACIAD0518	lgt	prolipoprotein diacylglyceryl transferase	2.4.99.-	307	0.618	1	1.000	166	0.556	0
ACIAD0142		putative activator of morphogenic pathway (BolA) , important in general stress response		191	0.680	1251	0.953	167	0.556	0
ACIAD1331	rpsU	30S ribosomal protein S21		313	0.617	1	1.000	168	0.555	0
ACIAD0247	ribD	bifunctional protein [Includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase (Riboflavin-specific deaminase); 5-amino-6-(5- phosphoribosylamino)uracil reductase (HTP reductase) ]	3.5.4.26, 1.1.1.193	154	0.707	1645	0.934	169	0.555	0
ACIAD3324	gmk	guanylate kinase	2.7.4.8	298	0.624	149	0.994	170	0.555	0
ACIAD2632		putative chromosomal replication initiator, DnaA-homolog protein hda		100	0.753	2264	0.904	171	0.554	0
ACIAD1248	rnhB	RNAse HII	3.1.26.4	233	0.653	832	0.970	172	0.553	0
ACIAD1133		conserved hypothetical protein; putative signal peptide		136	0.722	1911	0.922	173	0.553	0
ACIAD0064		putative virulence factor MviN family (multidrug/oligosaccharidyl-lipid/polysaccharide exporter superfamily)		197	0.675	1145	0.954	174	0.553	0
ACIAD3204	rplF	50S ribosomal protein L6		318	0.614	1	1.000	175	0.553	0
ACIAD2455	ubiA	4-hydroxybenzoate octaprenyltransferase (4-HB polyprenyltransferase)	2.5.1.-	162	0.703	1645	0.934	176	0.552	0
ACIAD3681	oxaA	Inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the Sec translocase		319	0.614	1	1.000	177	0.552	0
ACIAD2908	rplY	50S ribosomal protein L25		317	0.614	106	0.998	178	0.551	0
ACIAD2873	sucC	succinyl-CoA synthetase beta chain	6.2.1.5	316	0.615	106	0.998	179	0.551	0
ACIAD2926		conserved hypothetical protein		202	0.670	1145	0.954	180	0.550	0
ACIAD2417	hemK	methyl transferase	2.1.1.-	261	0.639	516	0.978	181	0.550	0
ACIAD0429	norM	multidrug resistance protein (Na(+)/drug antiporter) (Multidrug- efflux transporter)		187	0.685	1435	0.945	182	0.550	0
ACIAD0415	lnt	apolipoprotein N-acyltransferase, copper homeostasis protein	2.3.1.-	189	0.682	1435	0.945	183	0.549	0
ACIAD0011	anmK	Anhydro-N-acetylmuramic acid kinase (AnhMurNAc kinase)	2.7.1.170	68	0.793	2660	0.877	184	0.549	0
ACIAD1263		conserved hypothetical protein		245	0.647	832	0.970	185	0.548	0
ACIAD2079	glnD	uridylyltransferase	2.7.7.59	190	0.681	1435	0.945	186	0.547	0
ACIAD0677		putative glycoprotein endopeptidase metalloprotease	3.4.-.-	278	0.633	438	0.980	187	0.547	0
ACIAD3150		putative ribosomal RNA large subunit methyltransferase J		56	0.814	2817	0.863	188	0.546	0
ACIAD2584	lepA	GTP-binding protein		282	0.631	438	0.980	189	0.546	0
ACIAD2422		conserved hypothetical protein		142	0.717	1989	0.920	190	0.546	0
ACIAD2089	dnaE	DNA polymerase III, alpha chain	2.7.7.7	331	0.607	1	1.000	191	0.546	0
ACIAD0891		putative cell division protein, required for chromosome partitioning (FstK)		213	0.662	1108	0.958	192	0.546	0
ACIAD3216	rplB	50S ribosomal protein L2		283	0.631	438	0.980	193	0.546	0
ACIAD3160		putative metalloprotease ybeY-like	3.4.24.-	277	0.633	516	0.978	194	0.545	0
ACIAD0276	thiC	hydroxymethylpyrimidine moiety synthesis in thiamin biosynthesis		167	0.697	1747	0.932	195	0.545	0
ACIAD3247	dxs	1-deoxyxylulose-5-phosphate synthase	2.2.1.7	254	0.643	832	0.970	196	0.545	0
ACIAD3508		putative peptidase		170	0.694	1645	0.934	197	0.545	0
ACIAD2907	prs	ribose-phosphate pyrophosphokinase (Phosphoribosyl pyrophosphate synthetase)	2.7.6.1	209	0.664	1145	0.954	198	0.544	0
ACIAD3195	rpsD	30S ribosomal protein S4		336	0.605	1	1.000	199	0.544	0
ACIAD2659	dapF	diaminopimelate epimerase	5.1.1.7	211	0.662	1145	0.954	200	0.543	0
ACIAD1137	rnhA-dnaQ	bifunctional protein [Includes: ribonuclease HI; DNA polymerase III ,epsilon subunit, 3-5 exonucleolytic proofreading function]	3.1.26.4, 2.7.7.7	215	0.661	1145	0.954	201	0.542	0
ACIAD3268	glyQ	glycyl-tRNA synthetase, alpha chain	6.1.1.14	153	0.708	1911	0.922	202	0.542	0
ACIAD2829		conserved hypothetical protein		248	0.645	972	0.966	203	0.541	0
ACIAD0454	ptsP	phosphoenolpyruvate-protein phosphotransferase	2.7.3.9	214	0.662	1251	0.953	204	0.541	0
ACIAD0242		magnesium chelatase, competence related protein (ComM)		150	0.710	1989	0.920	205	0.541	0
ACIAD0184	atpH	membrane-bound ATP synthase , F1 sector, delta-subunit	7.1.2.2	328	0.608	149	0.994	206	0.541	0
ACIAD0871	fabG	3-oxoacyl-[acyl-carrier-protein] reductase	1.1.1.100	223	0.658	1145	0.954	207	0.540	0
ACIAD2501		putative two-component sensor kinase	2.7.3.-	220	0.659	1251	0.953	208	0.539	0
ACIAD1363	clpA	ATP-binding protease component		39	0.849	2983	0.840	209	0.539	0
ACIAD0294		putative general secretion pathway protein		326	0.609	248	0.992	210	0.539	0
ACIAD0045	dsbA	thiol:disulfide interchange protein, periplasmic, alkali-inducible	5.3.4.1	111	0.742	2421	0.898	211	0.538	0
ACIAD2283	metF	5,10-methylenetetrahydrofolate reductase	1.5.1.20	232	0.654	1145	0.954	212	0.536	0
ACIAD0908		conserved hypothetical protein		145	0.714	2108	0.913	213	0.536	0
ACIAD3050		conserved hypothetical protein; putative membrane protein		134	0.723	2220	0.907	214	0.535	0
ACIAD0259	pilS	sensor protein	2.7.13.3	303	0.621	516	0.978	215	0.535	0
ACIAD2896		conserved hypothetical protein		148	0.710	2072	0.914	216	0.534	0
ACIAD1251	csrA	carbon storage regulator		235	0.652	1145	0.954	217	0.534	0
ACIAD3213	rpsC	30S ribosomal protein S3		242	0.647	1108	0.958	218	0.534	0
ACIAD0342	pgsA	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase)	2.7.8.5	344	0.601	248	0.992	219	0.532	0
ACIAD3338	comP	competence factor involved in DNA binding and uptake		276	0.633	972	0.966	220	0.532	0
ACIAD2336		putative ATPase		120	0.735	2462	0.896	221	0.531	0
ACIAD0714		conserved hypothetical protein; putative Glycine cleavage T protein (aminomethyl transferase)		243	0.647	1145	0.954	222	0.531	0
ACIAD0282		Putative Fe(2+)-trafficking protein (yggX-like)		119	0.736	2462	0.896	223	0.531	0
ACIAD3126	radC	DNA repair protein, associated with replication forks		168	0.695	1989	0.920	224	0.530	0
ACIAD3035	accA	acetyl-coenzyme A carboxylase carboxyl transferase (alpha subunit)	6.4.1.2	221	0.659	1435	0.945	225	0.530	0
ACIAD2269	rpsB	30S ribosomal protein S2		368	0.591	106	0.998	226	0.530	0
ACIAD3657		putative membrane-bound lytic murein transglycosylase		312	0.617	573	0.977	227	0.530	0
ACIAD2909	pth	peptidyl-tRNA hydrolase	3.1.1.29	347	0.600	291	0.990	228	0.529	0
ACIAD2287	maeB	NAD(P)-dependent malic enzyme ; bifunctional: NADP-dependent malic oxidoreductase (N-terminal); phosphotransacetylase (C-terminal)]	1.1.1.40, 2.3.1.8	376	0.588	1	1.000	229	0.529	0
ACIAD0538	fumA	fumarate hydratase	4.2.1.2	199	0.673	1645	0.934	230	0.529	0
ACIAD0364	secG	preprotein translocase IISP family, auxillary membrane component		175	0.691	1911	0.922	231	0.529	0
ACIAD2839	groES	chaperone Hsp10, affects cell division		379	0.586	1	1.000	232	0.528	0
ACIAD2615	ruvB	holliday junction helicase, subunit B		229	0.656	1435	0.945	233	0.528	0
ACIAD0474	truA	tRNA-pseudouridine synthase I	4.2.1.70	381	0.586	1	1.000	234	0.528	0
ACIAD0455	nudH	(di)nucleoside polyphosphate hydrolase (Ap5A pyrophosphatase)	3.6.1.-	179	0.689	1911	0.922	235	0.528	0
ACIAD3241		putative toluene tolerance protein (Ttg2D)		101	0.753	2616	0.883	236	0.528	0
ACIAD3652	grpE	Hsp 24 nucleotide exchange factor		381	0.586	1	1.000	237	0.528	0
ACIAD2892		putative ferredoxin [4Fe-4S] (Fdx)		389	0.584	1	1.000	238	0.526	0
ACIAD2814	greB	transcription elongation factor and transcript cleavage		184	0.687	1911	0.922	239	0.526	0
ACIAD2872	sucD	succinyl-CoA synthetase alpha chain	6.2.1.5	392	0.582	1	1.000	240	0.524	0
ACIAD0901	dut	deoxyuridine 5'-triphosphate nucleotidohydrolase	3.6.1.23	266	0.638	1145	0.954	241	0.523	0
ACIAD0557	rlmN	23S rRNA adenosine methyltransferase	2.1.1.-	264	0.638	1145	0.954	242	0.523	0
ACIAD3236		putative DNA transformation protein (ComF)		206	0.667	1645	0.934	243	0.523	0
ACIAD3250	hemF	coproporphyrinogen III oxidase	1.3.3.3	182	0.688	2042	0.919	244	0.523	0
ACIAD3046	rplT	50S ribosomal protein L20, also posttranslational autoregulator		334	0.605	516	0.978	245	0.521	0
ACIAD0902	algC	phosphomannomutase	5.4.2.8	305	0.619	915	0.967	246	0.521	0
ACIAD0534	clpP	ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp) (Caseinolytic protease) (Protease Ti) (Heat shock protein F21.5)	3.4.21.92	274	0.634	1145	0.954	247	0.520	0
ACIAD2101		putative 3-oxoacyl-[acyl-carrier-protein] synthase III	2.3.1.41	247	0.645	1435	0.945	248	0.519	0
ACIAD1389	rpsT	30S ribosomal protein S20		398	0.579	106	0.998	249	0.519	0
ACIAD0884	fusA	protein chain elongation factor EF-G, GTP-binding		372	0.589	291	0.990	250	0.519	0
ACIAD1398	fdx	[2FE-2S] ferredoxin, electron carrer protein, believed to be involved in assembly of Fe-S clusters		281	0.632	1145	0.954	251	0.518	0
ACIAD0044	ubiG	3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase	2.1.1.64	226	0.657	1521	0.936	252	0.518	0
ACIAD3222		putative cystathionine beta-lyase, PLP-dependent (beta-cystathionase) (MetC)	4.4.1.8	159	0.704	2264	0.904	253	0.518	0
ACIAD2577	pdxJ	Pyridoxine 5'-phosphate synthase	2.6.99.2	198	0.675	1911	0.922	254	0.517	0
ACIAD1737	accB	biotin carboxyl carrier protein of acetyl-CoA carboxylase (BCCP)		225	0.657	1618	0.935	255	0.517	0
ACIAD1373	frr	ribosome releasing factor		294	0.626	1108	0.958	256	0.517	0
ACIAD3637	fmt	methionyl-tRNA formyltransferase	2.1.2.9	323	0.611	832	0.970	257	0.517	0
ACIAD3013	rpsI	30S ribosomal protein S9		405	0.574	1	1.000	258	0.516	0
ACIAD3008	apaH	bis(5'-nucleosyl)-tetraphosphatase, symmetrical (Diadenosine tetraphosphatase) (Ap4A hydrolase) (Diadenosine 5',5'''- P1,P4-tetraphosphate pyrophosphohydrolase)	3.6.1.41	287	0.629	1145	0.954	259	0.516	0
ACIAD0629		conserved hypothetical protein		107	0.749	2703	0.875	260	0.516	0
ACIAD0176	zur	transcriptional repressor of Zn transport system (Fur family)		133	0.723	2562	0.890	261	0.516	0
ACIAD3517	murG	UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase	2.4.1.227	257	0.642	1435	0.945	262	0.516	0
ACIAD2925	rpoD	sigma D (sigma 70) factor of RNA polymerase , major sigma factor during exponential growth		339	0.602	669	0.975	263	0.515	0
ACIAD2745		putative TPR repeat-containing protein		172	0.692	2169	0.909	264	0.515	0
ACIAD2359		conserved hypothetical protein; putative deoxyribonuclease		357	0.595	438	0.980	265	0.515	0
ACIAD0304	rplA	50S ribosomal protein L1		408	0.572	1	1.000	266	0.515	0
ACIAD3269	glyS	glycyl-tRNA synthetase, beta chain	6.1.1.14	200	0.672	1911	0.922	267	0.515	0
ACIAD3313	rpsP	30S ribosomal protein S16		409	0.572	1	1.000	268	0.515	0
ACIAD0737	nuoH	NADH dehydrogenase I chain H	7.1.1.2	292	0.627	1145	0.954	269	0.514	0
ACIAD2879	sdhB	succinate dehydrogenase, iron-sulfur subunit	1.-.-.-	263	0.638	1435	0.945	270	0.513	0
ACIAD1127	ubiH	ubiH protein, 2-octaprenyl-6-methoxyphynol hydroxylase, FAD/NAD(P)-binding	1.14.13.-	230	0.654	1645	0.934	271	0.513	0
ACIAD1113	rlmH	Ribosomal RNA large subunit methyltransferase H	2.1.1.-	504	0.539	669	0.975	272	0.513	8
ACIAD2874	lpd	dihydrolipoamide dehydrogenase E3 subunit of 2-oxoglutarate dehydrogenase complex (Glycine oxidation system L-factor)	1.8.1.4, 1.2.1.25	415	0.568	1	1.000	273	0.512	0
ACIAD2790		putative oxidoreductase		238	0.650	1521	0.936	274	0.512	0
ACIAD0368	nusA	transcription termination/antitermination, L factor (N utilization substance protein A)		394	0.581	291	0.990	275	0.512	0
ACIAD3054	infC	protein chain initiation factor IF-3		417	0.568	1	1.000	276	0.511	0
ACIAD0382	ubiB	2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway		203	0.670	1989	0.920	277	0.511	0
ACIAD3330	bfrB	bacterioferritin		403	0.575	149	0.994	278	0.511	0
ACIAD3184		putative integral membrane protein, possible transporter		330	0.607	972	0.966	279	0.510	0
ACIAD1870		putative metabolite transporter (MFS superfamily)		351	0.597	707	0.974	280	0.510	0
ACIAD0644	folC	bifunctional protein [Includes: folylpolyglutamate synthase (FPGS); dihydrofolate synthase ].	6.3.2.17, 6.3.2.12	346	0.601	795	0.971	281	0.510	0
ACIAD3242	ttg2C	toluene tolerance efflux transporter (ABC superfamily, peri-bind)		204	0.670	1989	0.920	282	0.510	0
ACIAD3532	dsbD	thiol:disulfide interchange protein precursor	1.8.1.8	299	0.623	1251	0.953	283	0.510	0
ACIAD3654	dnaK	chaperone Hsp70 in DNA biosynthesis/cell division		421	0.564	1	1.000	284	0.508	0
ACIAD2894	smpB	ssrA-binding protein (Small protein B)		377	0.587	438	0.980	285	0.507	0
ACIAD2586		putative serine protease MucD precursor		337	0.604	972	0.966	286	0.507	0
ACIAD1314	rhlB	ATP-dependent RNA helicase (DEAD box)		388	0.585	438	0.980	287	0.506	0
ACIAD0565		putative GTP-binding protein EngA		404	0.575	291	0.990	288	0.506	0
ACIAD0479	asd	aspartate-semialdehyde dehydrogenase, NAD(P)-binding	1.2.1.11	429	0.562	1	1.000	289	0.506	0
ACIAD1130		putative methyltransferase		432	0.561	1	1.000	290	0.505	0
ACIAD2614	ruvA	holliday junction helicase subunit A		290	0.627	1435	0.945	291	0.504	0
ACIAD1899	modC	molybdate transport protein (ABC superfamily, atp_bind)		256	0.642	1645	0.934	292	0.504	0
ACIAD1100		putative methyltransferase		564	0.523	438	0.980	293	0.503	7
ACIAD0898		putative outer membrane protein		180	0.689	2321	0.901	294	0.503	0
ACIAD0163		putative peptidoglycan binding protein		366	0.592	795	0.971	295	0.503	0
ACIAD0010		putative chaperone involved in Fe-S cluster assembly and activation (HesB-like)		320	0.613	1145	0.954	296	0.503	0
ACIAD2029		putative adenine-specific methylase	2.1.1.72	363	0.593	832	0.970	297	0.502	0
ACIAD1387	cysQ	PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase, converts PAPS to APS	3.1.3.7	212	0.662	2053	0.918	298	0.502	0
ACIAD0889	aat	leucyl, phenylalanyl-tRNA-protein transferase	2.3.2.6	124	0.732	2747	0.873	299	0.502	0
ACIAD0253	pepA	aminopeptidase A	3.4.11.1	396	0.580	374	0.981	300	0.502	0
ACIAD2644		conserved hypothetical protein		234	0.653	1854	0.923	301	0.501	0
ACIAD2583	lepB	leader peptidase (signal peptidase I) , serine protease	3.4.21.89	439	0.559	106	0.998	302	0.501	0
ACIAD0857	bioF	8-amino-7-oxononanoate synthase	2.3.1.47	371	0.589	832	0.970	303	0.499	0
ACIAD0419	yacG	DNA gyrase inhibitor YacG		174	0.691	2462	0.896	304	0.499	0
ACIAD3034	tilS	tRNA(Ile)-lysidine synthetase		460	0.553	1	1.000	305	0.498	0
ACIAD0856	bioA	adenosylmethionine-8-amino-7-oxononanoate aminotransferase	2.6.1.62	273	0.634	1645	0.934	306	0.498	0
ACIAD0634		putative TonB-dependent Outer membrane receptor for vitamin B12/cobalamin transport (Btub)		246	0.646	1815	0.926	307	0.498	0
ACIAD2275	lipA	lipoate synthase		456	0.554	106	0.998	308	0.497	0
ACIAD0739	nuoJ	NADH dehydrogenase I chain J	7.1.1.2	333	0.606	1145	0.954	309	0.497	0
ACIAD0249	ribC	riboflavin synthase alpha chain	2.5.1.9	309	0.618	1435	0.945	310	0.497	0
ACIAD3208	rplX	50S ribosomal protein L24		438	0.559	149	0.994	311	0.497	0
ACIAD2944		putative multidrug resistance protein mexB (Multidrug-efflux transporter mexB)		115	0.739	2817	0.863	312	0.496	0
ACIAD0563		conserved hypothetical protein		280	0.632	1645	0.934	313	0.496	0
ACIAD2404		putative permease (MFS superfamily)		244	0.647	1911	0.922	314	0.495	0
ACIAD1255	epd	D-erythrose 4-phosphate dehydrogenase	1.2.1.72	469	0.550	1	1.000	315	0.495	0
ACIAD1183	slyD	FKBP-type peptidyl-prolyl cis-trans isomerase		253	0.644	1854	0.923	316	0.494	0
ACIAD2853	ftsH	cell division protein	3.4.24.-	343	0.601	1145	0.954	317	0.493	0
ACIAD3060	panC	pantoate--beta-alanine ligase (Pantothenate synthetase) (Pantoate activating enzyme)	6.3.2.1	194	0.678	2421	0.898	318	0.492	0
ACIAD2897	rluD	ribosomal large subunit pseudouridine synthase D (Pseudouridylate synthase) (Uracil hydrolyase)	4.2.1.70	476	0.549	106	0.998	319	0.492	0
ACIAD1930		conserved hypothetical protein; putative Maf-like protein		140	0.718	2747	0.873	320	0.492	0
ACIAD0369	infB	protein chain initiation factor IF-2		481	0.547	1	1.000	321	0.492	0
ACIAD3571	ribH	6,7-dimethyl-8-ribityllumazine synthase (Lumazine synthase)(riboflavin synthase beta chain)	2.5.1.9	295	0.626	1618	0.935	322	0.492	0
ACIAD3621	dnaJ	heat shock protein (Hsp40), co-chaperone with DnaK		474	0.549	106	0.998	323	0.492	0
ACIAD3072	barA	GacS-like sensor kinase protein	2.7.3.-	249	0.645	1989	0.920	324	0.491	0
ACIAD2070	metI	D- and L-methionine transport protein (ABC superfamily, membrane)		289	0.629	1747	0.932	325	0.491	0
ACIAD0023	ribF	bifunctional protein [Includes: riboflavin kinase (Flavokinase); FMN adenylyltransferase (FAD pyrophosphorylase) (FAD synthetase)]	2.7.1.26, 2.7.7.2	446	0.557	291	0.990	326	0.491	0
ACIAD2219		conserved hypothetical protein; putative hydrolase		236	0.651	2072	0.914	327	0.490	0
ACIAD1220		conserved hypothetical protein; putative protein involved in purine metabolism		410	0.572	669	0.975	328	0.489	0
ACIAD3683	rnpA	RNase P, protein C5 component, processes tRNA, 4.5S RNA	3.1.26.5	470	0.550	149	0.994	329	0.489	0
ACIAD1970	dnaX	DNA polymerase III, tau and gamma subunits (DNA elongation factor III)	2.7.7.7	493	0.542	1	1.000	330	0.488	0
ACIAD1371	rimO	Ribosomal protein S12 methylthiotransferases		255	0.643	2053	0.918	331	0.488	0
ACIAD1149	rnt	ribonuclease T (degrades tRNA , has exonuclease and ssDNAse activity)	3.1.13.-	341	0.602	1402	0.949	332	0.488	0
ACIAD3371	gltX	glutamyl-tRNA synthetase	6.1.1.17, 6.1.1.24	485	0.545	106	0.998	333	0.488	0
ACIAD1383		conserved hypothetical protein; putative signal peptide		358	0.595	1251	0.953	334	0.487	0
ACIAD3199	secY	secretion protein		361	0.594	1145	0.954	335	0.487	0
ACIAD3501	pdxH	pyridoxamine 5'-phosphate oxidase (acts also on pyridoxine phosphate and pyridoxine)	1.4.3.5	332	0.606	1435	0.945	336	0.487	0
ACIAD3207	rplE	50S ribosomal protein L5		466	0.551	291	0.990	337	0.486	0
ACIAD0472	infA	protein chain initiation factor IF-1		505	0.539	1	1.000	338	0.485	0
ACIAD2832		putative transglycosylase		286	0.630	1911	0.922	339	0.483	0
ACIAD1375	cdsA	phosphatidate cytidylyltransferase	2.7.7.41	443	0.557	374	0.981	340	0.483	0
ACIAD3389	envZ	sensory histidine kinase in two-component regulatory system with OmpR		183	0.687	2616	0.883	341	0.483	0
ACIAD3065		putative nucleoside triphosphate pyrophosphohydrolase (MazG)		435	0.560	573	0.977	342	0.482	0
ACIAD1057	tesA	multifunctional protein [Includes: acyl-CoA thioesterase I; protease I; lysophospholipaseL(I)]	3.1.2.-, 3.4.21.-, 3.1.1.5	449	0.556	374	0.981	343	0.482	0
ACIAD2443	prmA	methylation of 50S ribosomal subunit protein L11 (ribosomal protein L11 methyltransferase)	2.1.1.-	186	0.685	2616	0.883	344	0.481	0
ACIAD2430	rpsF	30S ribosomal protein S6		523	0.534	1	1.000	345	0.481	0
ACIAD1488		putative protein secretion efflux system (ABC superfamily, atp_bind and membrane)		321	0.613	1645	0.934	346	0.481	0
ACIAD2264	mltB	membrane-bound lytic murein transglycosylase B	3.2.1.-	387	0.585	1145	0.954	347	0.480	0
ACIAD0466	leuD	3-isopropylmalate isomerase (dehydratase), subunit with LeuC	4.2.1.33	527	0.533	1	1.000	348	0.480	0
ACIAD0367		Putative ribosome maturation factor RimP		265	0.638	2072	0.914	349	0.480	0
ACIAD3355	ComQ	outer membrane protein ComQ/PilQ		103	0.752	2964	0.842	350	0.480	0
ACIAD2384	metR	transcriptional regulator		216	0.661	2421	0.898	351	0.479	0
ACIAD3206	rpsN	30S ribosomal protein S14		531	0.531	1	1.000	352	0.478	0
ACIAD2597	cbl	transcriptional regulator cysteine biosynthesis (LysR family)		185	0.685	2655	0.879	353	0.477	0
ACIAD2356	xcpV	general secretion pathway protein I precursor (PilD-dependent protein pddC)		453	0.555	573	0.977	354	0.477	0
ACIAD0487	uup	transport protein Uup (ABC superfamily, atp_bind)		275	0.634	2072	0.914	355	0.477	0
ACIAD3243	ttg2B	toluene tolerance efflux transporter (ABC superfamily, membrane)		291	0.627	2042	0.919	356	0.477	0
ACIAD3197	rpsM	30S ribosomal protein S13		540	0.530	106	0.998	357	0.475	0
ACIAD3210	rpsQ	30S ribosomal protein S17		480	0.547	374	0.981	358	0.474	0
ACIAD2288	cca	Multifunctional protein [Includes: CCA-adding enzyme ; 2'-nucleotidase ; 2',3'-cyclic phosphodiesterase ; Phosphatase]	2.7.7.72, 3.1.3.-, 3.1.4.-	555	0.525	1	1.000	359	0.473	0
ACIAD2090	TrmJ	tRNA (cytidine/uridine-2'-O-)-methyltransferase	2.1.1.-	268	0.636	2169	0.909	360	0.473	0
ACIAD0848	ligA	DNA ligase	6.5.1.2	483	0.546	374	0.981	361	0.473	0
ACIAD3209	rplN	50S ribosomal protein L14		551	0.527	106	0.998	362	0.473	0
ACIAD3010	pdxA	4-hydroxythreonine-4-phosphate dehydrogenase (4- (phosphohydroxy)-L-threonine dehydrogenase)	1.1.1.262	314	0.617	1911	0.922	363	0.472	0
ACIAD0893	minE	cell division topological specificity factor (reverses minC inhibition of FtsZ ring)		402	0.575	1145	0.954	364	0.472	0
ACIAD0493	topA	DNA topoisomerase type I, omega protein	5.6.2.1	535	0.531	149	0.994	365	0.472	0
ACIAD0407	hslO	heat shock protein Hsp33		285	0.630	2114	0.912	366	0.472	0
ACIAD0039	argA	N-alpha-acetylglutamate synthase (amino-acid acetyltransferase)	2.3.1.1	236	0.651	2421	0.898	367	0.472	0
ACIAD3057		conserved hypothetical protein		177	0.690	2778	0.871	368	0.471	0
ACIAD2255	glyA	serine hydroxymethyltransferase	2.1.2.1	524	0.534	291	0.990	369	0.471	0
ACIAD0826	mreC	rod shape-determining protein		384	0.586	1435	0.945	370	0.471	0
ACIAD0533	tig	trigger factor, molecular chaperone involved in septum formation		490	0.543	374	0.981	371	0.471	0
ACIAD0535	clpX	ATP-dependent Clp protease ATP-binding subunit		406	0.573	1145	0.954	372	0.470	0
ACIAD1058		putative transport protein (ABC superfamily, atp_bind)		308	0.618	2053	0.918	373	0.469	0
ACIAD0308	rpoC	DNA-directed RNA polymerase beta' chain (Transcriptase beta' chain) (RNA polymerase beta' subunit)	2.7.7.6	571	0.521	1	1.000	374	0.469	0
ACIAD0050	rph	ribonuclease PH (RNase PH), tRNA nucleotidyltransferase	2.7.7.56	193	0.678	2660	0.877	375	0.469	0
ACIAD3244	ttg2A	toluene tolerance efflux transporter (ABC superfamily, atp_bind)		315	0.617	2053	0.918	376	0.468	0
ACIAD2666		putative lysyl-tRNA synthetase (Lysine--tRNA ligase)(PoxA)	6.1.1.6	300	0.623	2108	0.913	377	0.467	0
ACIAD2581	rnc	ribonuclease III, ds RNA	3.1.26.3	499	0.540	438	0.980	378	0.467	0
ACIAD2096		putative GGDEF family protein		327	0.608	1854	0.923	379	0.467	0
ACIAD2475		conserved hypothetical protein; putative signal peptide		562	0.524	149	0.994	380	0.466	0
ACIAD2368	gidB	glucose-inhibited division protein B (methyltransferase)	2.1.-.-	545	0.528	291	0.990	381	0.466	0
ACIAD2207		putative aminomutase (kamA-like)		329	0.607	1854	0.923	382	0.466	0
ACIAD0731	nuoB	NADH dehydrogenase I chain B	7.1.1.2	413	0.569	1145	0.954	383	0.466	0
ACIAD0555		putative protein believed to be involved in assembly of Fe-S clusters		322	0.611	1989	0.920	384	0.466	0
ACIAD0417	sirA	small ubiquitous protein required for normal growth		414	0.569	1145	0.954	385	0.466	0
ACIAD1489		putative protein secretion efflux system, membrane fusion protein (hemolysin-type secretion transmembrane protein) (superfamily ABC, membrane)		324	0.610	1989	0.920	386	0.465	0
ACIAD0522	tatB	Sec-independent protein translocase protein		465	0.551	915	0.967	387	0.464	0
ACIAD3322	ispH	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (also involved in penicillin tolerance and control of the stringent response. Seems to directly or indirectly interact with relA to maintain it in an inactive form during normal growth.)	1.17.7.4	335	0.605	1911	0.922	388	0.463	0
ACIAD2637		putative protease; putative signal peptide peptidase sppA	3.4.-.-	420	0.565	1251	0.953	389	0.462	0
ACIAD2268	tsf	protein chain elongation factor EF-Ts		529	0.532	374	0.981	390	0.462	0
ACIAD1128	ubiF	2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase	1.14.13.-	260	0.639	2462	0.896	391	0.462	0
ACIAD2210	rpmE	50S ribosomal protein L31		526	0.534	516	0.978	392	0.460	0
ACIAD2045	bioB	biotin synthetase	2.8.1.6	383	0.586	1645	0.934	393	0.460	0
ACIAD0741	nuoL	NADH dehydrogenase I chain L	7.1.1.2	434	0.560	1145	0.954	394	0.460	0
ACIAD3363	mraY	phospho-N-acetylmuramoyl-pentapeptide transferase	2.7.8.13	380	0.586	1645	0.934	395	0.460	0
ACIAD3088		putative tRNA threonylcarbamoyladenosine dehydratase (tcdA)		160	0.704	2911	0.851	396	0.459	0
ACIAD2595	cysW	sulfate transport protein (ABC superfamily, membrane)		509	0.538	746	0.972	397	0.458	0
ACIAD1059		putative ABC transporter permease		506	0.539	746	0.972	398	0.458	0
ACIAD0742	nuoM	NADH dehydrogenase I chain M, membrane subunit	7.1.1.2	440	0.559	1145	0.954	399	0.458	0
ACIAD0643	accD	acetylCoA carboxylase, beta subunit	6.4.1.2	412	0.569	1435	0.945	400	0.458	0
ACIAD3037	trxA	thioredoxin		444	0.557	1145	0.954	401	0.457	0
ACIAD1332	tsaD	tRNA N6-adenosine threonylcarbamoyltransferase	3.4.24.57	538	0.530	516	0.978	402	0.457	0
ACIAD0730	nuoA	NADH dehydrogenase I chain A	7.1.1.2	445	0.557	1145	0.954	403	0.457	0
ACIAD0564		conserved hypothetical protein; putative PQQ enzyme repeat domain protein		353	0.596	1911	0.922	404	0.457	0
ACIAD3572	nusB	transcription termination, L factor (N utilization substance protein B)		525	0.534	669	0.975	405	0.457	0
ACIAD3041	pheT	phenylalanyl-tRNA synthetase, beta subunit	6.1.1.20	521	0.534	707	0.974	406	0.456	0
ACIAD1892		putative intracellular sulfur oxidation protein (DsrE-like)		448	0.557	1145	0.954	407	0.456	0
ACIAD1131		conserved hypothetical protein; putative signal peptide		539	0.530	516	0.978	408	0.456	0
ACIAD0858		putative biotin biosynthesis protein (BioC)		349	0.598	1989	0.920	409	0.456	0
ACIAD3557	phoB	positive response regulator for the pho regulon, autophosphorylates and phosphorylates sensor PhoR		218	0.659	2660	0.877	410	0.456	0
ACIAD3014	sspA	stringent starvation protein A		113	0.739	3048	0.827	411	0.455	0
ACIAD2945		putative outer membrane protein oprM precursor		205	0.669	2796	0.870	412	0.455	0
ACIAD1260		conserved hypothetical protein; putative Zn-dependent protease with chaperone function		297	0.624	2372	0.900	413	0.455	0
ACIAD0738	nuoI	NADH dehydrogenase I chain I, 2Fe-2S ferredoxin-related	7.1.1.2	491	0.542	972	0.966	414	0.455	0
ACIAD0361	pilC	type 4 fimbrial assembly protein		360	0.594	1911	0.922	415	0.455	0
ACIAD3625		putative RND efflux membrane fusion protein precursor		364	0.593	1854	0.923	416	0.455	0
ACIAD1384	recX	regulatory protein		543	0.529	573	0.977	417	0.454	0
ACIAD0802		putative bicyclomycin/multidrug transport protein (MFS superfamily)		356	0.595	1989	0.920	418	0.454	0
ACIAD0416	corC	magnesium and cobalt efflux protein		422	0.564	1435	0.945	419	0.454	0
ACIAD0070	wza	polysaccharide export protein		241	0.647	2616	0.883	420	0.454	0
ACIAD1346	sodB	superoxide dismutase [Fe]	1.15.1.1	359	0.595	1989	0.920	421	0.453	0
ACIAD1219	purB	adenylosuccinate lyase	4.3.2.2	296	0.625	2421	0.898	422	0.453	0
ACIAD3255	hemH	ferrochelatase	4.99.1.1	369	0.591	1911	0.922	423	0.453	0
ACIAD0551	nagZ	beta-N-acetyl-D-glucosaminidase	3.2.1.52	251	0.644	2616	0.883	424	0.452	0
ACIAD3106	leuS	leucyl-tRNA synthetase	6.1.1.4	546	0.528	707	0.974	425	0.451	0
ACIAD1376	dxr	1-deoxy-d-xylulose 5-phosphate reductoisomerase	1.1.1.267	367	0.592	1989	0.920	426	0.451	0
ACIAD3201	rpmD	50S ribosomal protein L30		570	0.522	438	0.980	427	0.451	0
ACIAD3220	rpsJ	30S ribosomal protein S10		473	0.549	1145	0.954	428	0.451	0
ACIAD3227		putative transcriptional regulator,		227	0.657	2747	0.873	429	0.451	0
ACIAD1399	hscA	heat shock protein (Hsp); chaperon involved in the Fe/S cluster biosynthesis		271	0.635	2569	0.887	430	0.450	0
ACIAD2432	rplI	50S ribosomal protein L9		605	0.510	291	0.990	431	0.449	0
ACIAD0740	nuoK	NADH-quinone oxidoreductase chain K (NADH dehydrogenase I, chain K) (NDH-1, chain K) (NUO11)	1.6.5.11	478	0.548	1145	0.954	432	0.449	0
ACIAD3249	ribA	GTP cyclohydrolase II	3.5.4.25	407	0.572	1645	0.934	433	0.449	0
ACIAD1362	clpS	substrate modulator for ClpAP, directs protease activity towards aggregated proteins		231	0.654	2747	0.873	434	0.448	0
ACIAD0890	trxB	thioredoxin reductase 1	1.8.1.9	541	0.529	832	0.970	435	0.448	0
ACIAD3135		putative tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC		310	0.617	2462	0.896	436	0.446	0
ACIAD0567		putative acyltransferase	2.3.1.-	622	0.505	291	0.990	437	0.445	0
ACIAD0469	leuB	3-isopropylmalate dehydrogenase	1.1.1.85	661	0.495	1	1.000	438	0.445	0
ACIAD0013	tyrS	tyrosyl-tRNA synthetase	6.1.1.1	660	0.495	1	1.000	439	0.445	0
ACIAD3194	rpoA	RNA polymerase, alpha subunit	2.7.7.6	559	0.524	795	0.971	440	0.445	0
ACIAD3366	ftsI	septum formation, penicillin binding protein 3, peptidoglycan synthetase	2.4.1.129	458	0.554	1435	0.945	441	0.445	0
ACIAD2043		conserved hypothetical protein; putative ferredoxin		325	0.609	2372	0.900	442	0.444	0
ACIAD3403		putative homoserine kinase (ThrB)	2.7.1.39	582	0.517	573	0.977	443	0.444	0
ACIAD1645	trmA	tRNA (uracil-5-)-methyltransferase	2.1.1.35	552	0.527	915	0.967	444	0.443	0
ACIAD1112		conserved hypothetical protein; putative enzyme with aromatic-ring-opening dioxygenase domain		482	0.546	2321	0.901	445	0.443	7
ACIAD1061	mtgA	monofunctional biosynthetic peptidoglycan transglycosylase	2.4.2.-	141	0.717	3041	0.828	446	0.443	0
ACIAD0859	bioD	dethiobiotin synthetase (Dethiobiotin synthase) (DTB synthetase) (DTBS)	6.3.3.3	424	0.564	1645	0.934	447	0.442	0
ACIAD0125		conserved hypothetical protein; putative membrane protein		399	0.577	1854	0.923	448	0.442	0
ACIAD0095	per	perosamine synthetase (WeeJ)		507	0.538	1251	0.953	449	0.441	0
ACIAD2665		conserved hypothetical protein; putative membrane protein		575	0.520	832	0.970	450	0.440	0
ACIAD2580	era	GTP-binding protein,16S rRNA-binding,ribosome-associated GTPase		610	0.509	438	0.980	451	0.440	0
ACIAD0302	rplK	50S ribosomal protein L11		492	0.542	1402	0.949	452	0.440	0
ACIAD0042		putative oxoacyl-(acyl carrier protein) reductase	1.1.1.100	433	0.561	1645	0.934	453	0.440	0
ACIAD0004	gyrB	DNA gyrase, subunit B (type II topoisomerase)	5.6.2.2	608	0.509	438	0.980	454	0.440	0
ACIAD2374	miaA	delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase	2.5.1.75	590	0.514	707	0.974	455	0.439	0
ACIAD1305		putative glutathionine S-transferase	2.5.1.18	267	0.636	2670	0.876	456	0.439	0
ACIAD0913	YggS	Pyridoxal phosphate homeostasis protein		442	0.558	1618	0.935	457	0.439	0
ACIAD3182	prlC	oligopeptidase A	3.4.24.70	666	0.493	149	0.994	458	0.438	0
ACIAD2452		putative hydroxyacylglutathione hydrolase (GloB)	3.1.2.6	611	0.509	516	0.978	459	0.438	0
ACIAD3193	rplQ	50S ribosomal protein L17		684	0.486	1	1.000	460	0.438	0
ACIAD1216		putative protease (SohB)	3.4.21.-	338	0.602	2421	0.898	461	0.437	0
ACIAD0660	murA	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)	2.5.1.7	488	0.544	1435	0.945	462	0.437	0
ACIAD0306	rplL	50S ribosomal protein L7/L12		612	0.508	516	0.978	463	0.437	0
ACIAD3214	rplV	50S ribosomal protein L22		623	0.505	374	0.981	464	0.437	0
ACIAD1944		conserved hypothetical protein		632	0.503	374	0.981	465	0.436	0
ACIAD0706	ppiC	peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase)	5.2.1.8	385	0.586	2169	0.909	466	0.436	0
ACIAD0488		conserved hypothetical protein; putative SlyX protein		667	0.493	248	0.992	467	0.436	0
ACIAD1980	tal	transaldolase	2.2.1.2	537	0.530	1145	0.954	468	0.435	0
ACIAD1408	hupB	DNA-binding protein HU-beta		606	0.510	707	0.974	469	0.435	0
ACIAD1221	trmU	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase	2.1.1.61	689	0.483	1	1.000	470	0.435	0
ACIAD0685	rpe	D-ribulose-5-phosphate 3-epimerase	5.1.3.1	534	0.531	1145	0.954	471	0.435	0
ACIAD0209		putative Rossmann-fold nucleotide-binding protein involved in DNA uptake (Smf)		419	0.567	1854	0.923	472	0.435	0
ACIAD3516	murC	UDP-N-acetylmuramate--alanine ligase	6.3.2.8	497	0.541	1435	0.945	473	0.435	0
ACIAD0847		putative cell division protein (ZipA-like)		673	0.490	248	0.992	474	0.434	0
ACIAD0609	aspS	aspartyl-tRNA synthetase	6.1.1.12, 6.1.1.23, 6.1.1.-	626	0.504	516	0.978	475	0.434	0
ACIAD0398	recB	exonuclease V, beta chain	3.1.11.5	500	0.539	1435	0.945	476	0.434	0
ACIAD0173	rhtB	homoserine/homoserine lactone efflux protein		279	0.632	2747	0.873	477	0.434	0
ACIAD0114	dadR	transcriptional regulator for dadAX gene cluster (AsnC family)		532	0.531	1251	0.953	478	0.434	0
ACIAD3062	folK	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase) (HPPK) (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase) (PPPK)	2.7.6.3	602	0.510	795	0.971	479	0.433	0
ACIAD0912	pilT	twitching motility protein		452	0.555	1747	0.932	480	0.433	0
ACIAD2319		putative porin precursor		423	0.564	1911	0.922	481	0.432	0
ACIAD1063	estR	esterase operon transcriptional regulator (LysR family)		98	0.754	3163	0.798	482	0.432	0
ACIAD3200	rplO	50S ribosomal protein L15		674	0.490	291	0.990	483	0.432	0
ACIAD2893	coaD	phosphopantetheine adenylyltransferase	2.7.7.3	515	0.536	1435	0.945	484	0.431	0
ACIAD1165		putative transcriptional regulator, luxR family		635	0.501	573	0.977	485	0.431	0
ACIAD3235	recG	ATP-dependent DNA helicase		513	0.536	1435	0.945	486	0.431	0
ACIAD3506	aceF	dihydrolipoamide S-acetyltransferase, E2 component of the pyruvate dehydrogenase complex	2.3.1.12	648	0.498	438	0.980	487	0.431	0
ACIAD3594		conserved hypothetical protein; putative diguanylate cyclase/phosphodiesterase		342	0.602	2521	0.892	488	0.431	0
ACIAD3047	rpmI	50S ribosomal protein L35		706	0.477	1	1.000	489	0.430	0
ACIAD2635	purN	phosphoribosylglycinamide formyltransferase 1	2.1.2.2	519	0.535	1435	0.945	490	0.430	0
ACIAD1266	ilvD	dihydroxy-acid dehydratase	4.2.1.9	557	0.525	1145	0.954	491	0.430	0
ACIAD3414		putative integrase		375	0.589	2321	0.901	492	0.430	0
ACIAD3684	rpmH	50S ribosomal protein L34		705	0.477	1	1.000	493	0.430	0
ACIAD2655	etfB	electron transfer flavoprotein beta-subunit		489	0.544	1521	0.936	494	0.429	0
ACIAD2474	hemE	uroporphyrinogen decarboxylase	4.1.1.37	428	0.563	1989	0.920	495	0.429	0
ACIAD3219	rplC	50S ribosomal protein L3		647	0.498	516	0.978	496	0.429	0
ACIAD1873		putative transport protein (ABC superfamily, ATP_bind)		621	0.505	832	0.970	497	0.428	0
ACIAD1372	pyrH	uridylate kinase	2.7.4.-	662	0.494	438	0.980	498	0.428	0
ACIAD0746		putative transcriptional regulator (LysR family)		477	0.548	1747	0.932	499	0.428	0
ACIAD2740		putative transcriptional regulator (TetR/AcrR family)		386	0.586	2372	0.900	500	0.427	0
ACIAD0291		putative DNA binding protein		578	0.518	1108	0.958	501	0.427	0

ACIAD3680

trmE

GTPase involved in tRNA modification and in thiophene and furan oxidation

4

0.954

106

0.998

2

0.855

0

ACIAD0211

def

peptide deformylase 1 (N-formylmethionylaminoacyl-tRNA deformylase, binds Zn(II))

3.5.1.88

15

0.912

1

1.000

3

0.821

0

ACIAD2440

mnmG

tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG

23

0.888

1

1.000

4

0.799

0

ACIAD3228

putative GTPase, involved in coordination of cell cycle (EngB)

21

0.893

291

0.990

5

0.787

0

ACIAD3038

rho

transcription termination factor

30

0.876

106

0.998

6

0.785

0

ACIAD1378

putative outer membrane protein

1

1.000

1645

0.934

7

0.785

0

ACIAD1311

rpoH

sigma H (sigma 32) factor of RNA polymerase

8

0.937

1145

0.954

8

0.768

0

ACIAD2641

lolC

transport protein of outer membrane lipoproteins (ABC superfamily, membrane)

2

0.994

1911

0.922

9

0.761

0

ACIAD2372

surA

peptidyl-prolyl cis-trans isomerase

5.2.1.8

29

0.881

573

0.977

10

0.757

0

ACIAD2465

conserved hypothetical protein

13

0.920

1145

0.954

11

0.755

0

ACIAD0657

rpoN

RNA polymerase sigma-54 factor

10

0.930

1435

0.945

12

0.748

0

ACIAD0589

putative SecYEG protein translocase auxillary subunit (YajC)

5

0.951

1618

0.935

13

0.748

0

ACIAD2371

ostA

organic solvent tolerance protein precursor or increased membrane permeability protein

12

0.922

1435

0.945

14

0.741

0

ACIAD0894

minD

cell division inhibitor, a membrane ATPase,activates minC

18

0.903

1145

0.954

15

0.740

0

ACIAD3361

mrcA

penicillin binding protein

2.4.1.129, 3.4.-.-

7

0.941

1618

0.935

16

0.740

0

ACIAD2002

kdsA

2-dehydro-3-deoxyphosphooctonate aldolase

2.5.1.55

54

0.819

1

1.000

17

0.737

0

ACIAD1500

mutS

methyl-directed mismatch repair, recognize exocyclic adducts of guanosine

52

0.823

106

0.998

18

0.737

0

ACIAD3479

kdtA

3-deoxy-D-manno-2-octulosonate transferase

2.-.-.-

3

0.960

1911

0.922

19

0.735

0

ACIAD2348

cmk

cytidylate kinase (cytidine monophosphate (CMP) kinase)

2.7.4.25

51

0.825

291

0.990

20

0.727

0

ACIAD2346

himD

integration host factor (IHF),beta subunit, site specific recombination

26

0.885

1145

0.954

21

0.726

0

ACIAD1409

ppiD

peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase)

5.2.1.8

19

0.898

1435

0.945

22

0.722

0

ACIAD2362

kdsB

3-deoxy-manno-octulosonate cytidylyltransferase

2.7.7.38

6

0.947

2053

0.918

23

0.719

0

ACIAD0273

dksA

DnaK suppressor protein

31

0.875

1145

0.954

24

0.717

0

ACIAD1368

glnG

response regulator in two-component regulatory system with GlnL, nitrogen regulation (EBP family)

9

0.937

1989

0.920

25

0.714

0

ACIAD3512

ftsA

cell division protein

32

0.868

1145

0.954

26

0.712

0

ACIAD0438

rne

ribonuclease E (RNase E): endoribonuclease for rRNA processing and mRNA degradation

3.1.4.-

17

0.904

1645

0.934

27

0.710

0

ACIAD2640

lolD

transport protein of outer membrane lipoproteins (ABC superfamily, atp_bind)

34

0.866

1251

0.953

28

0.709

0

ACIAD2898

putative competence protein (ComL)

11

0.924

1911

0.922

29

0.707

0

ACIAD3040

himA

integration host factor (IHF), alpha subunit, DNA-binding protein, DNA replication

36

0.859

1145

0.954

30

0.704

0

ACIAD2623

pal

peptidoglycan-associated lipoprotein precursor

16

0.905

2053

0.918

31

0.687

0

ACIAD3122

secB

molecular chaperone in protein export

20

0.897

1989

0.920

32

0.684

0

ACIAD2265

putative rare lipoprotein A family (RlpA-like)

66

0.795

669

0.975

33

0.680

0

ACIAD0590

tgt

queuine tRNA-ribosyltransferase (tRNA-guanine transglycosylase) (Guanine insertion enzyme)

2.4.2.29

25

0.887

1911

0.922

34

0.679

0

ACIAD3132

putative intracellular septation protein (IspZ)

63

0.799

795

0.971

35

0.678

0

ACIAD2363

lpxK

tetraacyldisaccharide 4'-kinase (Lipid A 4'-kinase)

2.7.1.130

27

0.884

1911

0.922

36

0.677

0

ACIAD0869

rpmF

50S ribosomal protein L32

104

0.752

1

1.000

37

0.677

0

ACIAD2854

ftsJ

cell division protein (filamentous temperature sensitivity, 23S rRNA U2552 ribose 2'-O-methyltransferase, SAM-dependent)

2.1.1.-

47

0.833

1402

0.949

38

0.676

0

ACIAD3503

guaB

IMP dehydrogenase

1.1.1.205

44

0.841

1435

0.945

39

0.676

0

ACIAD1482

kdsD

D-arabinose 5-phosphate isomerase

5.3.1.13

14

0.918

2372

0.900

40

0.669

0

ACIAD2373

hfq

host factor I for bacteriophage Q beta replication, a growth-related protein

33

0.867

1911

0.922

41

0.664

0

ACIAD2313

putative nucleoid-associated protein (YbaB like)

109

0.743

291

0.990

42

0.655

0

ACIAD1225

dacC

D-ala-D-ala-carboxypeptidase; penicillin-binding protein 5 (precursor)

3.4.16.4

22

0.891

2264

0.904

43

0.655

0

ACIAD3157

putative lytic murein transglycosylase, soluble (Slt)

3.2.1.-

41

0.848

1854

0.923

44

0.651

0

ACIAD2418

prfA

peptide chain release factor 1

132

0.724

1

1.000

45

0.651

0

ACIAD1381

fabZ

(3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase

4.2.1.-

57

0.810

1435

0.945

46

0.651

0

ACIAD2862

greA

transcription elongation factor, cleaves 3' nucleotide of paused mRNA

138

0.719

1

1.000

47

0.648

0

ACIAD0442

rluC

23S rRNA pseudouridylate synthase

4.2.1.70

42

0.846

1911

0.922

48

0.648

0

ACIAD2937

lolA

outer-membrane lipoproteins carrier protein

43

0.843

1854

0.923

49

0.647

0

ACIAD3514

ftsQ

cell division protein (in growth of wall at septum)

38

0.851

2042

0.919

50

0.647

0

ACIAD2939

rplU

50S ribosomal protein L21

123

0.733

291

0.990

51

0.646

0

ACIAD2402

conserved hypothetical protein

77

0.783

1108

0.958

52

0.646

0

ACIAD2875

sucB

dihydrolipoamide succinyltransferase, E2 component of 2-oxoglutarate dehydrogenase complex

2.3.1.61

37

0.858

2108

0.913

53

0.644

0

ACIAD0734

nuoE

NADH dehydrogenase I chain E

7.1.1.2

75

0.784

1145

0.954

54

0.643

0

ACIAD2619

tolQ

tolerance to group A colicins, single-stranded DNA filamentous phage, required for OM integrity

24

0.888

2462

0.896

55

0.641

0

ACIAD1485

putative lipopolysaccharide transport protein A (ABC superfamily, peri_bind) (LptA)

46

0.836

1911

0.922

56

0.640

0

ACIAD0872

acpP

acyl carrier protein (ACP)

152

0.709

1

1.000

57

0.638

0

ACIAD3548

dsbB

disulfide bond formation protein (Disulfide oxidoreductase)

49

0.832

1911

0.922

58

0.637

0

ACIAD0829

putative Maf-like protein

50

0.831

1911

0.922

59

0.636

0

ACIAD1322

putative membrane protein required for colicin V production (CvpA)

48

0.832

1989

0.920

60

0.635

0

ACIAD1232

putative glutaredoxin-like protein (grxD-like)

76

0.783

1402

0.949

61

0.635

0

ACIAD2876

sucA

2-oxoglutarate decarboxylase E1 component of the 2-oxoglutarate dehydrogenase complex

1.2.4.2

155

0.707

106

0.998

62

0.634

0

ACIAD0588

secD

preprotein translocase, IISP family, part of the channel

71

0.786

1435

0.945

63

0.632

0

ACIAD2599

dapD

2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase

2.3.1.117

89

0.770

1145

0.954

64

0.631

0

ACIAD1996

ispF

2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

4.6.1.12

61

0.802

1645

0.934

65

0.630

0

ACIAD1229

nlpD

lipoprotein precursor

53

0.821

1911

0.922

66

0.629

0

ACIAD0735

nuoF

NADH dehydrogenase I chain F

7.1.1.2

93

0.767

1145

0.954

67

0.629

0

ACIAD0409

priA

primosomal protein N' (= factor Y) directs replication fork assembly at D-loops, ATP-dependent.

130

0.725

438

0.980

68

0.628

0

ACIAD0063

ampD

N-acetyl-anhydromuramyl-L-alanine amidase (Regulates ampC)

40

0.848

2220

0.907

69

0.628

0

ACIAD0432

putative heme chaperone HemW like

82

0.774

1402

0.949

70

0.627

0

ACIAD0561

ispG

1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase

116

0.738

832

0.970

71

0.625

0

ACIAD3202

rpsE

30S ribosomal protein S5

169

0.694

1

1.000

72

0.625

0

ACIAD0825

mreB

rod shape-determining protein

65

0.795

1645

0.934

73

0.624

0

ACIAD3510

lpxC

UDP-3-O-acyl-N-acetylglucosamine deacetylase

3.5.1.-

55

0.814

1911

0.922

74

0.623

0

ACIAD2618

putative Acyl-CoA thioester hydrolase

3.1.2.-

35

0.866

2521

0.892

75

0.621

0

ACIAD2433

dnaB

replicative DNA helicase;chromosome replication, chain elongation

176

0.690

1

1.000

76

0.621

0

ACIAD0353

protein of unknown function UPF0301

69

0.791

1645

0.934

77

0.621

0

ACIAD3574

pgpA

phosphatidylglycerophosphatase A

3.1.3.27

70

0.790

1645

0.934

78

0.620

0

ACIAD3158

putative tRNA-i(6)A37 modification enzyme (MiaB)

181

0.688

106

0.998

79

0.617

0

ACIAD3149

pssA

phosphatidylserine synthase

2.7.8.8

144

0.714

438

0.980

80

0.617

0

ACIAD2881

sdhD

succinate dehydrogenase, hydrophobic subunit

1.-.-.-

99

0.754

1251

0.953

81

0.617

0

ACIAD2589

conserved hypothetical protein; putative periplasmic solute-binding protein

60

0.804

1854

0.923

82

0.617

0

ACIAD2838

groEL

chaperone Hsp60, peptide-dependent ATPase, heat shock protein

188

0.684

1

1.000

83

0.616

0

ACIAD0296

gph

phosphoglycolate phosphatase, contains a phophatase-like domain

3.1.3.18

135

0.722

746

0.972

84

0.614

0

ACIAD1920

glnS

glutaminyl-tRNA synthetase

6.1.1.18

62

0.800

1911

0.922

85

0.613

0

ACIAD1246

putative cytochrome

59

0.804

1989

0.920

86

0.613

0

ACIAD0895

minC

cell division inhibitor, inhibits ftsZ ring formation

127

0.728

915

0.967

87

0.613

0

ACIAD1265

clpB

ATP-dependent protease, Hsp 100, part of multi-chaperone system with DnaK, DnaJ, and GrpE

158

0.706

374

0.981

88

0.612

0

ACIAD0234

parC

DNA topoisomerase IV, subunit A

5.99.1.-

28

0.883

2670

0.876

89

0.610

0

ACIAD1646

putA

bifunctional protein [Includes: proline dehydrogenase (Proline oxidase); delta-1-pyrroline-5-carboxylate dehydrogenase (P5C dehydrogenase)]

1.5.5.2, 1.2.1.88

192

0.679

106

0.998

90

0.609

0

ACIAD1132

conserved hypothetical protein

87

0.771

1521

0.936

91

0.608

0

ACIAD0870

fabD

malonyl-CoA-[acyl-carrier-protein] transacylase

2.3.1.39

86

0.772

1618

0.935

92

0.607

0

ACIAD2041

ruvC

holliday junction nuclease

88

0.770

1645

0.934

93

0.605

0

ACIAD1405

iscR

repressor of the iscRSUA operon, involved in assembly of Fe-S clusters

67

0.794

1989

0.920

94

0.605

0

ACIAD0300

secE

preprotein translocase IISP family, membrane subunit

146

0.713

795

0.971

95

0.605

0

ACIAD3139

putative acyl-CoA thioester hydrolase

3.1.2.-

118

0.736

1145

0.954

96

0.604

0

ACIAD1483

kdsC

3-Deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) phosphatase

3.1.3.45

90

0.769

1645

0.934

97

0.604

0

ACIAD2622

tolB

tolerance to colicins E2, E, A, and K, required for OM integrity

94

0.763

1521

0.936

98

0.602

0

ACIAD2284

putative ribosomal RNA small subunit methyltransferase E (rsmE)

2.1.1.-

161

0.704

669

0.975

99

0.602

0

ACIAD3500

recJ

ssDNA exonuclease, 5' --> 3' specific , Mg dependent

3.1.-.-

73

0.785

1911

0.922

100

0.601

0

ACIAD1380

lpxD

UDP-3-O-[3-hydroxylauroyl] glucosamine N-acyltransferase

2.3.1.-

78

0.782

1911

0.922

101

0.599

0

ACIAD0736

nuoG

NADH dehydrogenase I chain G

7.1.1.2

125

0.730

1145

0.954

102

0.599

0

ACIAD2361

holB

DNA polymerase III, delta prime subunit

2.7.7.7

126

0.730

1145

0.954

103

0.598

0

ACIAD2431

rpsR

30S ribosomal protein S18

208

0.666

106

0.998

104

0.597

0

ACIAD1922

lpxH

UDP-2,3-diacylglucosamine hydrolase

3.6.1.-

80

0.779

1911

0.922

105

0.597

0

ACIAD3189

conserved hypothetical protein

96

0.758

1521

0.936

106

0.597

0

ACIAD3325

rpoZ

RNA polymerase, omega subunit

2.7.7.6

164

0.699

707

0.974

107

0.597

0

ACIAD3012

rplM

50S ribosomal protein L13

178

0.690

438

0.980

108

0.596

0

ACIAD1402

iscA

iron-binding protein , believed to be involved in Fe-S protein formation or repair

121

0.735

1402

0.949

109

0.596

0

ACIAD2403

conserved hypothetical protein; putative outer membrane protein

173

0.692

573

0.977

110

0.595

0

ACIAD2324

lpxB

lipid A-disaccharide synthase

2.4.1.182

81

0.778

1911

0.922

111

0.595

0

ACIAD2561

putative GTP-binding protein (Obg)

222

0.659

1

1.000

112

0.593

0

ACIAD1382

lpxA

UDP-acetylglucosamine acyltransferase

2.3.1.129

83

0.773

1911

0.922

113

0.592

0

ACIAD0252

holC

DNA polymerase III, chi subunit

2.7.7.7

84

0.773

1911

0.922

114

0.592

0

ACIAD3368

mraW

Ribosomal RNA small subunit methyltransferase H

2.1.1.-

228

0.657

1

1.000

115

0.591

0

ACIAD0591

queA

S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine biosynthesis protein )

5.-.-.-

105

0.750

1618

0.935

116

0.590

0

ACIAD0255

putative lipopolysaccharide permease

108

0.747

1618

0.935

117

0.587

0

ACIAD1738

aroQ

3-dehydroquinate dehydratase, type II

4.2.1.10

239

0.649

1

1.000

118

0.584

0

ACIAD0316

htpG

chaperone Hsp90, heat shock protein C 62.5

151

0.709

1145

0.954

119

0.582

0

ACIAD3085

dusA

tRNA-dihydrouridine synthase A

95

0.759

1911

0.922

120

0.581

0

ACIAD0828

mreD

rod shape-determining protein

219

0.659

291

0.990

121

0.581

0

ACIAD3015

sspB

stringent starvation protein B

112

0.739

1645

0.934

122

0.580

0

ACIAD0402

pnp

polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase)

2.7.7.8

201

0.671

438

0.980

123

0.580

0

ACIAD3544

parE

topoisomerase IV subunit B

5.99.1.-

45

0.839

2670

0.876

124

0.580

0

ACIAD2620

tolR

tolerance to group A colicins, single-stranded DNA filamentous phage, required for OM integrity

64

0.795

2421

0.898

125

0.577

0

ACIAD1328

conserved hypothetical protein; putative signal peptide

72

0.785

2264

0.904

126

0.577

0

ACIAD0909

smpA

outer membrane lipoprotein

74

0.784

2264

0.904

127

0.577

0

ACIAD2553

folD

bifunctional protein [Includes: 5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolase]

1.5.1.5, 3.5.4.9

165

0.698

1108

0.958

128

0.576

0

ACIAD2375

mutL

enzyme in methyl-directed mismatch repair, stimulates binding of Vsr and MutS to heteroduplex DNA

143

0.717

1435

0.945

129

0.576

0

ACIAD0384

ubiE

S-adenosylmethionine : 2-DMK methyltransferase and 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase

2.1.1.-

102

0.753

1911

0.922

130

0.576

0

ACIAD3560

psd

phosphatidylserine decarboxylase

4.1.1.65

122

0.734

1645

0.934

131

0.576

0

ACIAD2968

ispA

geranyltranstransferase (farnesyldiphosphate synthase) (FPP synthase)

2.5.1.10

117

0.737

1747

0.932

132

0.575

0

ACIAD2347

rpsA

30S ribosomal protein S1

261

0.639

1

1.000

133

0.575

0

ACIAD2000

putative cell division protein (FtsB-like)

106

0.749

1854

0.923

134

0.575

0

ACIAD1253

alaS

alanyl-tRNA synthetase

6.1.1.7

259

0.640

106

0.998

135

0.574

0

ACIAD3449

ssb

ssDNA-binding protein controls activity of RecBCD nuclease

210

0.663

438

0.980

136

0.574

0

ACIAD2446

fis

DNA-binding protein for site-specific recombination, transcription of rRNA and tRNA operons and DNA replication

156

0.707

1402

0.949

137

0.573

0

ACIAD0788

pilI

twitching motility protein

128

0.727

1521

0.936

138

0.573

0

ACIAD0587

secF

preprotein translocase, IISP family, membrane subunit

110

0.743

1815

0.926

139

0.573

0

ACIAD1486

putative lipopolysaccharide transport protein B (ABC superfamily, atp_bind) (LptB)

147

0.711

1435

0.945

140

0.572

0

ACIAD0648

secA

preprotein translocase, secretion protein of IISP family

166

0.697

1145

0.954

141

0.572

0

ACIAD2943

putative RND multidrug efflux membrane fusion protein MexA precursor

79

0.781

2321

0.901

142

0.570

0

ACIAD2214

putative transporter

195

0.678

972

0.966

143

0.569

0

ACIAD0791

dapE

succinyl-diaminopimelate desuccinylase

3.5.1.18

217

0.660

516

0.978

144

0.569

0

ACIAD3518

gshB

glutathione synthetase

6.3.2.3

131

0.725

1645

0.934

145

0.569

0

ACIAD0659

putative toluene tolerance protein Ttg2F

163

0.700

1402

0.949

146

0.568

0

ACIAD3212

rplP

50S ribosomal protein L16

284

0.631

1

1.000

147

0.568

0

ACIAD3365

murE

UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase

6.3.2.13

157

0.707

1435

0.945

148

0.568

0

ACIAD1227

surE

5'(3')-nucleotidase

3.1.3.5, 3.1.3.6

139

0.719

1521

0.936

149

0.567

0

ACIAD2927

lipB

lipoate-protein ligase B (Lipoate biosynthesis protein B)

6.-.-.-

292

0.627

1

1.000

150

0.564

0

ACIAD1400

hscB

co-chaperone protein (Hsc20), believed to be involved in assembly of Fe-S clusters

171

0.694

1402

0.949

151

0.563

0

ACIAD0790

chpA

component of chemotactic signal transduction system

137

0.721

1747

0.932

152

0.563

0

ACIAD1101

pbpA

penicillin-binding protein 2

288

0.629

1435

0.945

153

0.562

7

ACIAD0484

lpxP

Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (Heat shock protein B)

2.3.1.-

114

0.739

2053

0.918

154

0.561

0

ACIAD3311

trmD

tRNA (guanine-1-)-methyltransferase.

2.1.1.-

270

0.635

291

0.990

155

0.560

0

ACIAD3018

putative lipoprotein precursor (VacJ) transmembrane

58

0.808

2660

0.877

156

0.559

0

ACIAD3042

pheS

phenylalanyl-tRNA synthetase, alpha-subunit

6.1.1.20

304

0.620

1

1.000

157

0.558

0

ACIAD2652

gyrA

DNA gyrase, subunit A, type II topoisomerase

5.6.2.2

301

0.622

106

0.998

158

0.558

0

ACIAD1385

recA

DNA strand exchange and recombination protein with protease and nuclease activity.

224

0.658

795

0.971

159

0.558

0

ACIAD0254

putative lipopolysaccharide permease

85

0.773

2462

0.896

160

0.558

0

ACIAD2261

queF

NADPH-dependent 7-cyano-7-deazaguanine reductase (NADPH-dependent nitrile oxidoreductase)

1.7.1.-

91

0.768

2421

0.898

161

0.557

0

ACIAD1369

glnL

sensory kinase (soluble) in two-component regulatory system

92

0.768

2421

0.898

162

0.557

0

ACIAD3585

dapA

4-hydroxy-tetrahydrodipicolinate synthase

4.3.3.7

302

0.622

106

0.998

163

0.557

0

ACIAD2938

rpmA

50S ribosomal protein L27

311

0.617

1

1.000

164

0.556

0

ACIAD2578

recO

DNA repair protein

129

0.726

1911

0.922

165

0.556

0

ACIAD0518

lgt

prolipoprotein diacylglyceryl transferase

2.4.99.-

307

0.618

1

1.000

166

0.556

0

ACIAD0142

putative activator of morphogenic pathway (BolA) , important in general stress response

191

0.680

1251

0.953

167

0.556

0

ACIAD1331

rpsU

30S ribosomal protein S21

313

0.617

1

1.000

168

0.555

0

ACIAD0247

ribD

bifunctional protein [Includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase (Riboflavin-specific deaminase); 5-amino-6-(5- phosphoribosylamino)uracil reductase (HTP reductase) ]

3.5.4.26, 1.1.1.193

154

0.707

1645

0.934

169

0.555

0

ACIAD3324

gmk

guanylate kinase

2.7.4.8

298

0.624

149

0.994

170

0.555

0

ACIAD2632

putative chromosomal replication initiator, DnaA-homolog protein hda

100

0.753

2264

0.904

171

0.554

0

ACIAD1248

rnhB

RNAse HII

3.1.26.4

233

0.653

832

0.970

172

0.553

0

ACIAD1133

conserved hypothetical protein; putative signal peptide

136

0.722

1911

0.922

173

0.553

0

ACIAD0064

putative virulence factor MviN family (multidrug/oligosaccharidyl-lipid/polysaccharide exporter superfamily)

197

0.675

1145

0.954

174

0.553

0

ACIAD3204

rplF

50S ribosomal protein L6

318

0.614

1

1.000

175

0.553

0

ACIAD2455

ubiA

4-hydroxybenzoate octaprenyltransferase (4-HB polyprenyltransferase)

2.5.1.-

162

0.703

1645

0.934

176

0.552

0

ACIAD3681

oxaA

Inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the Sec translocase

319

0.614

1

1.000

177

0.552

0

ACIAD2908

rplY

50S ribosomal protein L25

317

0.614

106

0.998

178

0.551

0

ACIAD2873

sucC

succinyl-CoA synthetase beta chain

6.2.1.5

316

0.615

106

0.998

179

0.551

0

ACIAD2926

conserved hypothetical protein

202

0.670

1145

0.954

180

0.550

0

ACIAD2417

hemK

methyl transferase

2.1.1.-

261

0.639

516

0.978

181

0.550

0

ACIAD0429

norM

multidrug resistance protein (Na(+)/drug antiporter) (Multidrug- efflux transporter)

187

0.685

1435

0.945

182

0.550

0

ACIAD0415

lnt

apolipoprotein N-acyltransferase, copper homeostasis protein

2.3.1.-

189

0.682

1435

0.945

183

0.549

0

ACIAD0011

anmK

Anhydro-N-acetylmuramic acid kinase (AnhMurNAc kinase)

2.7.1.170

68

0.793

2660

0.877

184

0.549

0

ACIAD1263

conserved hypothetical protein

245

0.647

832

0.970

185

0.548

0

ACIAD2079

glnD

uridylyltransferase

2.7.7.59

190

0.681

1435

0.945

186

0.547

0

ACIAD0677

putative glycoprotein endopeptidase metalloprotease

3.4.-.-

278

0.633

438

0.980

187

0.547

0

ACIAD3150

putative ribosomal RNA large subunit methyltransferase J

56

0.814

2817

0.863

188

0.546

0

ACIAD2584

lepA

GTP-binding protein

282

0.631

438

0.980

189

0.546

0

ACIAD2422

conserved hypothetical protein

142

0.717

1989

0.920

190

0.546

0

ACIAD2089

dnaE

DNA polymerase III, alpha chain

2.7.7.7

331

0.607

1

1.000

191

0.546

0

ACIAD0891

putative cell division protein, required for chromosome partitioning (FstK)

213

0.662

1108

0.958

192

0.546

0

ACIAD3216

rplB

50S ribosomal protein L2

283

0.631

438

0.980

193

0.546

0

ACIAD3160

putative metalloprotease ybeY-like

3.4.24.-

277

0.633

516

0.978

194

0.545

0

ACIAD0276

thiC

hydroxymethylpyrimidine moiety synthesis in thiamin biosynthesis

167

0.697

1747

0.932

195

0.545

0

ACIAD3247

dxs

1-deoxyxylulose-5-phosphate synthase

2.2.1.7

254

0.643

832

0.970

196

0.545

0

ACIAD3508

putative peptidase

170

0.694

1645

0.934

197

0.545

0

ACIAD2907

prs

ribose-phosphate pyrophosphokinase (Phosphoribosyl pyrophosphate synthetase)

2.7.6.1

209

0.664

1145

0.954

198

0.544

0

ACIAD3195

rpsD

30S ribosomal protein S4

336

0.605

1

1.000

199

0.544

0

ACIAD2659

dapF

diaminopimelate epimerase

5.1.1.7

211

0.662

1145

0.954

200

0.543

0

ACIAD1137

rnhA-dnaQ

bifunctional protein [Includes: ribonuclease HI; DNA polymerase III ,epsilon subunit, 3-5 exonucleolytic proofreading function]

3.1.26.4, 2.7.7.7

215

0.661

1145

0.954

201

0.542

0

ACIAD3268

glyQ

glycyl-tRNA synthetase, alpha chain

6.1.1.14

153

0.708

1911

0.922

202

0.542

0

ACIAD2829

conserved hypothetical protein

248

0.645

972

0.966

203

0.541

0

ACIAD0454

ptsP

phosphoenolpyruvate-protein phosphotransferase

2.7.3.9

214

0.662

1251

0.953

204

0.541

0

ACIAD0242

magnesium chelatase, competence related protein (ComM)

150

0.710

1989

0.920

205

0.541

0

ACIAD0184

atpH

membrane-bound ATP synthase , F1 sector, delta-subunit

7.1.2.2

328

0.608

149

0.994

206

0.541

0

ACIAD0871

fabG

3-oxoacyl-[acyl-carrier-protein] reductase

1.1.1.100

223

0.658

1145

0.954

207

0.540

0

ACIAD2501

putative two-component sensor kinase

2.7.3.-

220

0.659

1251

0.953

208

0.539

0

ACIAD1363

clpA

ATP-binding protease component

39

0.849

2983

0.840

209

0.539

0

ACIAD0294

putative general secretion pathway protein

326

0.609

248

0.992

210

0.539

0

ACIAD0045

dsbA

thiol:disulfide interchange protein, periplasmic, alkali-inducible

5.3.4.1

111

0.742

2421

0.898

211

0.538

0

ACIAD2283

metF

5,10-methylenetetrahydrofolate reductase

1.5.1.20

232

0.654

1145

0.954

212

0.536

0

ACIAD0908

conserved hypothetical protein

145

0.714

2108

0.913

213

0.536

0

ACIAD3050

conserved hypothetical protein; putative membrane protein

134

0.723

2220

0.907

214

0.535

0

ACIAD0259

pilS

sensor protein

2.7.13.3

303

0.621

516

0.978

215

0.535

0

ACIAD2896

conserved hypothetical protein

148

0.710

2072

0.914

216

0.534

0

ACIAD1251

csrA

carbon storage regulator

235

0.652

1145

0.954

217

0.534

0

ACIAD3213

rpsC

30S ribosomal protein S3

242

0.647

1108

0.958

218

0.534

0

ACIAD0342

pgsA

CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase)

2.7.8.5

344

0.601

248

0.992

219

0.532

0

ACIAD3338

comP

competence factor involved in DNA binding and uptake

276

0.633

972

0.966

220

0.532

0

ACIAD2336

putative ATPase

120

0.735

2462

0.896

221

0.531

0

ACIAD0714

conserved hypothetical protein; putative Glycine cleavage T protein (aminomethyl transferase)

243

0.647

1145

0.954

222

0.531

0

ACIAD0282

Putative Fe(2+)-trafficking protein (yggX-like)

119

0.736

2462

0.896

223

0.531

0

ACIAD3126

radC

DNA repair protein, associated with replication forks

168

0.695

1989

0.920

224

0.530

0

ACIAD3035

accA

acetyl-coenzyme A carboxylase carboxyl transferase (alpha subunit)

6.4.1.2

221

0.659

1435

0.945

225

0.530

0

ACIAD2269

rpsB

30S ribosomal protein S2

368

0.591

106

0.998

226

0.530

0

ACIAD3657

putative membrane-bound lytic murein transglycosylase

312

0.617

573

0.977

227

0.530

0

ACIAD2909

pth

peptidyl-tRNA hydrolase

3.1.1.29

347

0.600

291

0.990

228

0.529

0

ACIAD2287

maeB

NAD(P)-dependent malic enzyme ; bifunctional: NADP-dependent malic oxidoreductase (N-terminal); phosphotransacetylase (C-terminal)]

1.1.1.40, 2.3.1.8

376

0.588

1

1.000

229

0.529

0

ACIAD0538

fumA

fumarate hydratase

4.2.1.2

199

0.673

1645

0.934

230

0.529

0

ACIAD0364

secG

preprotein translocase IISP family, auxillary membrane component

175

0.691

1911

0.922

231

0.529

0

ACIAD2839

groES

chaperone Hsp10, affects cell division

379

0.586

1

1.000

232

0.528

0

ACIAD2615

ruvB

holliday junction helicase, subunit B

229

0.656

1435

0.945

233

0.528

0

ACIAD0474

truA

tRNA-pseudouridine synthase I

4.2.1.70

381

0.586

1

1.000

234

0.528

0

ACIAD0455

nudH

(di)nucleoside polyphosphate hydrolase (Ap5A pyrophosphatase)

3.6.1.-

179

0.689

1911

0.922

235

0.528

0

ACIAD3241

putative toluene tolerance protein (Ttg2D)

101

0.753

2616

0.883

236

0.528

0

ACIAD3652

grpE

Hsp 24 nucleotide exchange factor

381

0.586

1

1.000

237

0.528

0

ACIAD2892

putative ferredoxin [4Fe-4S] (Fdx)

389

0.584

1

1.000

238

0.526

0

ACIAD2814

greB

transcription elongation factor and transcript cleavage

184

0.687

1911

0.922

239

0.526

0

ACIAD2872

sucD

succinyl-CoA synthetase alpha chain

6.2.1.5

392

0.582

1

1.000

240

0.524

0

ACIAD0901

dut

deoxyuridine 5'-triphosphate nucleotidohydrolase

3.6.1.23

266

0.638

1145

0.954

241

0.523

0

ACIAD0557

rlmN

23S rRNA adenosine methyltransferase

2.1.1.-

264

0.638

1145

0.954

242

0.523

0

ACIAD3236

putative DNA transformation protein (ComF)

206

0.667

1645

0.934

243

0.523

0

ACIAD3250

hemF

coproporphyrinogen III oxidase

1.3.3.3

182

0.688

2042

0.919

244

0.523

0

ACIAD3046

rplT

50S ribosomal protein L20, also posttranslational autoregulator

334

0.605

516

0.978

245

0.521

0

ACIAD0902

algC

phosphomannomutase

5.4.2.8

305

0.619

915

0.967

246

0.521

0

ACIAD0534

clpP

ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp) (Caseinolytic protease) (Protease Ti) (Heat shock protein F21.5)

3.4.21.92

274

0.634

1145

0.954

247

0.520

0

ACIAD2101

putative 3-oxoacyl-[acyl-carrier-protein] synthase III

2.3.1.41

247

0.645

1435

0.945

248

0.519

0

ACIAD1389

rpsT

30S ribosomal protein S20

398

0.579

106

0.998

249

0.519

0

ACIAD0884

fusA

protein chain elongation factor EF-G, GTP-binding

372

0.589

291

0.990

250

0.519

0

ACIAD1398

fdx

[2FE-2S] ferredoxin, electron carrer protein, believed to be involved in assembly of Fe-S clusters

281

0.632

1145

0.954

251

0.518

0

ACIAD0044

ubiG

3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase

2.1.1.64

226

0.657

1521

0.936

252

0.518

0

ACIAD3222

putative cystathionine beta-lyase, PLP-dependent (beta-cystathionase) (MetC)

4.4.1.8

159

0.704

2264

0.904

253

0.518

0

ACIAD2577

pdxJ

Pyridoxine 5'-phosphate synthase

2.6.99.2

198

0.675

1911

0.922

254

0.517

0

ACIAD1737

accB

biotin carboxyl carrier protein of acetyl-CoA carboxylase (BCCP)

225

0.657

1618

0.935

255

0.517

0

ACIAD1373

frr

ribosome releasing factor

294

0.626

1108

0.958

256

0.517

0

ACIAD3637

fmt

methionyl-tRNA formyltransferase

2.1.2.9

323

0.611

832

0.970

257

0.517

0

ACIAD3013

rpsI

30S ribosomal protein S9

405

0.574

1

1.000

258

0.516

0

ACIAD3008

apaH

bis(5'-nucleosyl)-tetraphosphatase, symmetrical (Diadenosine tetraphosphatase) (Ap4A hydrolase) (Diadenosine 5',5'''- P1,P4-tetraphosphate pyrophosphohydrolase)

3.6.1.41

287

0.629

1145

0.954

259

0.516

0

ACIAD0629

conserved hypothetical protein

107

0.749

2703

0.875

260

0.516

0

ACIAD0176

zur

transcriptional repressor of Zn transport system (Fur family)

133

0.723

2562

0.890

261

0.516

0

ACIAD3517

murG

UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase

2.4.1.227

257

0.642

1435

0.945

262

0.516

0

ACIAD2925

rpoD

sigma D (sigma 70) factor of RNA polymerase , major sigma factor during exponential growth

339

0.602

669

0.975

263

0.515

0

ACIAD2745

putative TPR repeat-containing protein

172

0.692

2169

0.909

264

0.515

0

ACIAD2359

conserved hypothetical protein; putative deoxyribonuclease

357

0.595

438

0.980

265

0.515

0

ACIAD0304

rplA

50S ribosomal protein L1

408

0.572

1

1.000

266

0.515

0

ACIAD3269

glyS

glycyl-tRNA synthetase, beta chain

6.1.1.14

200

0.672

1911

0.922

267

0.515

0

ACIAD3313

rpsP

30S ribosomal protein S16

409

0.572

1

1.000

268

0.515

0

ACIAD0737

nuoH

NADH dehydrogenase I chain H

7.1.1.2

292

0.627

1145

0.954

269

0.514

0

ACIAD2879

sdhB

succinate dehydrogenase, iron-sulfur subunit

1.-.-.-

263

0.638

1435

0.945

270

0.513

0

ACIAD1127

ubiH

ubiH protein, 2-octaprenyl-6-methoxyphynol hydroxylase, FAD/NAD(P)-binding

1.14.13.-

230

0.654

1645

0.934

271

0.513

0

ACIAD1113

rlmH

Ribosomal RNA large subunit methyltransferase H

2.1.1.-

504

0.539

669

0.975

272

0.513

8

ACIAD2874

lpd

dihydrolipoamide dehydrogenase E3 subunit of 2-oxoglutarate dehydrogenase complex (Glycine oxidation system L-factor)

1.8.1.4, 1.2.1.25

415

0.568

1

1.000

273

0.512

0

ACIAD2790

putative oxidoreductase

238

0.650

1521

0.936

274

0.512

0

ACIAD0368

nusA

transcription termination/antitermination, L factor (N utilization substance protein A)

394

0.581

291

0.990

275

0.512

0

ACIAD3054

infC

protein chain initiation factor IF-3

417

0.568

1

1.000

276

0.511

0

ACIAD0382

ubiB

2-octaprenylphenol hydroxylase of ubiquinone biosynthetic pathway

203

0.670

1989

0.920

277

0.511

0

ACIAD3330

bfrB

bacterioferritin

403

0.575

149

0.994

278

0.511

0

ACIAD3184

putative integral membrane protein, possible transporter

330

0.607

972

0.966

279

0.510

0

ACIAD1870

putative metabolite transporter (MFS superfamily)

351

0.597

707

0.974

280

0.510

0

ACIAD0644

folC

bifunctional protein [Includes: folylpolyglutamate synthase (FPGS); dihydrofolate synthase ].

6.3.2.17, 6.3.2.12

346

0.601

795

0.971

281

0.510

0

ACIAD3242

ttg2C

toluene tolerance efflux transporter (ABC superfamily, peri-bind)

204

0.670

1989

0.920

282

0.510

0

ACIAD3532

dsbD

thiol:disulfide interchange protein precursor

1.8.1.8

299

0.623

1251

0.953

283

0.510

0

ACIAD3654

dnaK

chaperone Hsp70 in DNA biosynthesis/cell division

421

0.564

1

1.000

284

0.508

0

ACIAD2894

smpB

ssrA-binding protein (Small protein B)

377

0.587

438

0.980

285

0.507

0

ACIAD2586

putative serine protease MucD precursor

337

0.604

972

0.966

286

0.507

0

ACIAD1314

rhlB

ATP-dependent RNA helicase (DEAD box)

388

0.585

438

0.980

287

0.506

0

ACIAD0565

putative GTP-binding protein EngA

404

0.575

291

0.990

288

0.506

0

ACIAD0479

asd

aspartate-semialdehyde dehydrogenase, NAD(P)-binding

1.2.1.11

429

0.562

1

1.000

289

0.506

0

ACIAD1130

putative methyltransferase

432

0.561

1

1.000

290

0.505

0

ACIAD2614

ruvA

holliday junction helicase subunit A

290

0.627

1435

0.945

291

0.504

0

ACIAD1899

modC

molybdate transport protein (ABC superfamily, atp_bind)

256

0.642

1645

0.934

292

0.504

0

ACIAD1100

putative methyltransferase

564

0.523

438

0.980

293

0.503

7

ACIAD0898

putative outer membrane protein

180

0.689

2321

0.901

294

0.503

0

ACIAD0163

putative peptidoglycan binding protein

366

0.592

795

0.971

295

0.503

0

ACIAD0010

putative chaperone involved in Fe-S cluster assembly and activation (HesB-like)

320

0.613

1145

0.954

296

0.503

0

ACIAD2029

putative adenine-specific methylase

2.1.1.72

363

0.593

832

0.970

297

0.502

0

ACIAD1387

cysQ

PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase, converts PAPS to APS

3.1.3.7

212

0.662

2053

0.918

298

0.502

0

ACIAD0889

aat

leucyl, phenylalanyl-tRNA-protein transferase

2.3.2.6

124

0.732

2747

0.873

299

0.502

0

ACIAD0253

pepA

aminopeptidase A

3.4.11.1

396

0.580

374

0.981

300

0.502

0

ACIAD2644

conserved hypothetical protein

234

0.653

1854

0.923

301

0.501

0

ACIAD2583

lepB

leader peptidase (signal peptidase I) , serine protease

3.4.21.89

439

0.559

106

0.998

302

0.501

0

ACIAD0857

bioF

8-amino-7-oxononanoate synthase

2.3.1.47

371

0.589

832

0.970

303

0.499

0

ACIAD0419

yacG

DNA gyrase inhibitor YacG

174

0.691

2462

0.896

304

0.499

0

ACIAD3034

tilS

tRNA(Ile)-lysidine synthetase

460

0.553

1

1.000

305

0.498

0

ACIAD0856

bioA

adenosylmethionine-8-amino-7-oxononanoate aminotransferase

2.6.1.62

273

0.634

1645

0.934

306

0.498

0

ACIAD0634

putative TonB-dependent Outer membrane receptor for vitamin B12/cobalamin transport (Btub)

246

0.646

1815

0.926

307

0.498

0

ACIAD2275

lipA

lipoate synthase

456

0.554

106

0.998

308

0.497

0

ACIAD0739

nuoJ

NADH dehydrogenase I chain J

7.1.1.2

333

0.606

1145

0.954

309

0.497

0

ACIAD0249

ribC

riboflavin synthase alpha chain

2.5.1.9

309

0.618

1435

0.945

310

0.497

0

ACIAD3208

rplX

50S ribosomal protein L24

438

0.559

149

0.994

311

0.497

0

ACIAD2944

putative multidrug resistance protein mexB (Multidrug-efflux transporter mexB)

115

0.739

2817

0.863

312

0.496

0

ACIAD0563

conserved hypothetical protein

280

0.632

1645

0.934

313

0.496

0

ACIAD2404

putative permease (MFS superfamily)

244

0.647

1911

0.922

314

0.495

0

ACIAD1255

epd

D-erythrose 4-phosphate dehydrogenase

1.2.1.72

469

0.550

1

1.000

315

0.495

0

ACIAD1183

slyD

FKBP-type peptidyl-prolyl cis-trans isomerase

253

0.644

1854

0.923

316

0.494

0

ACIAD2853

ftsH

cell division protein

3.4.24.-

343

0.601

1145

0.954

317

0.493

0

ACIAD3060

panC

pantoate--beta-alanine ligase (Pantothenate synthetase) (Pantoate activating enzyme)

6.3.2.1

194

0.678

2421

0.898

318

0.492

0

ACIAD2897

rluD

ribosomal large subunit pseudouridine synthase D (Pseudouridylate synthase) (Uracil hydrolyase)

4.2.1.70

476

0.549

106

0.998

319

0.492

0

ACIAD1930

conserved hypothetical protein; putative Maf-like protein

140

0.718

2747

0.873

320

0.492

0

ACIAD0369

infB

protein chain initiation factor IF-2

481

0.547

1

1.000

321

0.492

0

ACIAD3571

ribH

6,7-dimethyl-8-ribityllumazine synthase (Lumazine synthase)(riboflavin synthase beta chain)

2.5.1.9

295

0.626

1618

0.935

322

0.492

0

ACIAD3621

dnaJ

heat shock protein (Hsp40), co-chaperone with DnaK

474

0.549

106

0.998

323

0.492

0

ACIAD3072

barA

GacS-like sensor kinase protein

2.7.3.-

249

0.645

1989

0.920

324

0.491

0

ACIAD2070

metI

D- and L-methionine transport protein (ABC superfamily, membrane)

289

0.629

1747

0.932

325

0.491

0

ACIAD0023

ribF

bifunctional protein [Includes: riboflavin kinase (Flavokinase); FMN adenylyltransferase (FAD pyrophosphorylase) (FAD synthetase)]

2.7.1.26, 2.7.7.2

446

0.557

291

0.990

326

0.491

0

ACIAD2219

conserved hypothetical protein; putative hydrolase

236

0.651

2072

0.914

327

0.490

0

ACIAD1220

conserved hypothetical protein; putative protein involved in purine metabolism

410

0.572

669

0.975

328

0.489

0

ACIAD3683

rnpA

RNase P, protein C5 component, processes tRNA, 4.5S RNA

3.1.26.5

470

0.550

149

0.994

329

0.489

0

ACIAD1970

dnaX

DNA polymerase III, tau and gamma subunits (DNA elongation factor III)

2.7.7.7

493

0.542

1

1.000

330

0.488

0

ACIAD1371

rimO

Ribosomal protein S12 methylthiotransferases

255

0.643

2053

0.918

331

0.488

0

ACIAD1149

rnt

ribonuclease T (degrades tRNA , has exonuclease and ssDNAse activity)

3.1.13.-

341

0.602

1402

0.949

332

0.488

0

ACIAD3371

gltX

glutamyl-tRNA synthetase

6.1.1.17, 6.1.1.24

485

0.545

106

0.998

333

0.488

0

ACIAD1383

conserved hypothetical protein; putative signal peptide

358

0.595

1251

0.953

334

0.487

0

ACIAD3199

secY

secretion protein

361

0.594

1145

0.954

335

0.487

0

ACIAD3501

pdxH

pyridoxamine 5'-phosphate oxidase (acts also on pyridoxine phosphate and pyridoxine)

1.4.3.5

332

0.606

1435

0.945

336

0.487

0

ACIAD3207

rplE

50S ribosomal protein L5

466

0.551

291

0.990

337

0.486

0

ACIAD0472

infA

protein chain initiation factor IF-1

505

0.539

1

1.000

338

0.485

0

ACIAD2832

putative transglycosylase

286

0.630

1911

0.922

339

0.483

0

ACIAD1375

cdsA

phosphatidate cytidylyltransferase

2.7.7.41

443

0.557

374

0.981

340

0.483

0

ACIAD3389

envZ

sensory histidine kinase in two-component regulatory system with OmpR

183

0.687

2616

0.883

341

0.483

0

ACIAD3065

putative nucleoside triphosphate pyrophosphohydrolase (MazG)

435

0.560

573

0.977

342

0.482

0

ACIAD1057

tesA

multifunctional protein [Includes: acyl-CoA thioesterase I; protease I; lysophospholipaseL(I)]

3.1.2.-, 3.4.21.-, 3.1.1.5

449

0.556

374

0.981

343

0.482

0

ACIAD2443

prmA

methylation of 50S ribosomal subunit protein L11 (ribosomal protein L11 methyltransferase)

2.1.1.-

186

0.685

2616

0.883

344

0.481

0

ACIAD2430

rpsF

30S ribosomal protein S6

523

0.534

1

1.000

345

0.481

0

ACIAD1488

putative protein secretion efflux system (ABC superfamily, atp_bind and membrane)

321

0.613

1645

0.934

346

0.481

0

ACIAD2264

mltB

membrane-bound lytic murein transglycosylase B

3.2.1.-

387

0.585

1145

0.954

347

0.480

0

ACIAD0466

leuD

3-isopropylmalate isomerase (dehydratase), subunit with LeuC

4.2.1.33

527

0.533

1

1.000

348

0.480

0

ACIAD0367

Putative ribosome maturation factor RimP

265

0.638

2072

0.914

349

0.480

0

ACIAD3355

ComQ

outer membrane protein ComQ/PilQ

103

0.752

2964

0.842

350

0.480

0

ACIAD2384

metR

transcriptional regulator

216

0.661

2421

0.898

351

0.479

0

ACIAD3206

rpsN

30S ribosomal protein S14

531

0.531

1

1.000

352

0.478

0

ACIAD2597

cbl

transcriptional regulator cysteine biosynthesis (LysR family)

185

0.685

2655

0.879

353

0.477

0

ACIAD2356

xcpV

general secretion pathway protein I precursor (PilD-dependent protein pddC)

453

0.555

573

0.977

354

0.477

0

ACIAD0487

uup

transport protein Uup (ABC superfamily, atp_bind)

275

0.634

2072

0.914

355

0.477

0

ACIAD3243

ttg2B

toluene tolerance efflux transporter (ABC superfamily, membrane)

291

0.627

2042

0.919

356

0.477

0

ACIAD3197

rpsM

30S ribosomal protein S13

540

0.530

106

0.998

357

0.475

0

ACIAD3210

rpsQ

30S ribosomal protein S17

480

0.547

374

0.981

358

0.474

0

ACIAD2288

cca

Multifunctional protein [Includes: CCA-adding enzyme ; 2'-nucleotidase ; 2',3'-cyclic phosphodiesterase ; Phosphatase]

2.7.7.72, 3.1.3.-, 3.1.4.-

555

0.525

1

1.000

359

0.473

0

ACIAD2090

TrmJ

tRNA (cytidine/uridine-2'-O-)-methyltransferase

2.1.1.-

268

0.636

2169

0.909

360

0.473

0

ACIAD0848

ligA

DNA ligase

6.5.1.2

483

0.546

374

0.981

361

0.473

0

ACIAD3209

rplN

50S ribosomal protein L14

551

0.527

106

0.998

362

0.473

0

ACIAD3010

pdxA

4-hydroxythreonine-4-phosphate dehydrogenase (4- (phosphohydroxy)-L-threonine dehydrogenase)

1.1.1.262

314

0.617

1911

0.922

363

0.472

0

ACIAD0893

minE

cell division topological specificity factor (reverses minC inhibition of FtsZ ring)

402

0.575

1145

0.954

364

0.472

0

ACIAD0493

topA

DNA topoisomerase type I, omega protein

5.6.2.1

535

0.531

149

0.994

365

0.472

0

ACIAD0407

hslO

heat shock protein Hsp33

285

0.630

2114

0.912

366

0.472

0

ACIAD0039

argA

N-alpha-acetylglutamate synthase (amino-acid acetyltransferase)

2.3.1.1

236

0.651

2421

0.898

367

0.472

0

ACIAD3057

conserved hypothetical protein

177

0.690

2778

0.871

368

0.471

0

ACIAD2255

glyA

serine hydroxymethyltransferase

2.1.2.1

524

0.534

291

0.990

369

0.471

0

ACIAD0826

mreC

rod shape-determining protein

384

0.586

1435

0.945

370

0.471

0

ACIAD0533

tig

trigger factor, molecular chaperone involved in septum formation

490

0.543

374

0.981

371

0.471

0

ACIAD0535

clpX

ATP-dependent Clp protease ATP-binding subunit

406

0.573

1145

0.954

372

0.470

0

ACIAD1058

putative transport protein (ABC superfamily, atp_bind)

308

0.618

2053

0.918

373

0.469

0

ACIAD0308

rpoC

DNA-directed RNA polymerase beta' chain (Transcriptase beta' chain) (RNA polymerase beta' subunit)

2.7.7.6

571

0.521

1

1.000

374

0.469

0

ACIAD0050

rph

ribonuclease PH (RNase PH), tRNA nucleotidyltransferase

2.7.7.56

193

0.678

2660

0.877

375

0.469

0

ACIAD3244

ttg2A

toluene tolerance efflux transporter (ABC superfamily, atp_bind)

315

0.617

2053

0.918

376

0.468

0

ACIAD2666

putative lysyl-tRNA synthetase (Lysine--tRNA ligase)(PoxA)

6.1.1.6

300

0.623

2108

0.913

377

0.467

0

ACIAD2581

rnc

ribonuclease III, ds RNA

3.1.26.3

499

0.540

438

0.980

378

0.467

0

ACIAD2096

putative GGDEF family protein

327

0.608

1854

0.923

379

0.467

0

ACIAD2475

conserved hypothetical protein; putative signal peptide

562

0.524

149

0.994

380

0.466

0

ACIAD2368

gidB

glucose-inhibited division protein B (methyltransferase)

2.1.-.-

545

0.528

291

0.990

381

0.466

0

ACIAD2207

putative aminomutase (kamA-like)

329

0.607

1854

0.923

382

0.466

0

ACIAD0731

nuoB

NADH dehydrogenase I chain B

7.1.1.2

413

0.569

1145

0.954

383

0.466

0

ACIAD0555

putative protein believed to be involved in assembly of Fe-S clusters

322

0.611

1989

0.920

384

0.466

0

ACIAD0417

sirA

small ubiquitous protein required for normal growth

414

0.569

1145

0.954

385

0.466

0

ACIAD1489

putative protein secretion efflux system, membrane fusion protein (hemolysin-type secretion transmembrane protein) (superfamily ABC, membrane)

324

0.610

1989

0.920

386

0.465

0

ACIAD0522

tatB

Sec-independent protein translocase protein

465

0.551

915

0.967

387

0.464

0

ACIAD3322

ispH

4-hydroxy-3-methylbut-2-enyl diphosphate reductase (also involved in penicillin tolerance and control of the stringent response. Seems to directly or indirectly interact with relA to maintain it in an inactive form during normal growth.)

1.17.7.4

335

0.605

1911

0.922

388

0.463

0

ACIAD2637

putative protease; putative signal peptide peptidase sppA

3.4.-.-

420

0.565

1251

0.953

389

0.462

0

ACIAD2268

tsf

protein chain elongation factor EF-Ts

529

0.532

374

0.981

390

0.462

0

ACIAD1128

ubiF

2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase

1.14.13.-

260

0.639

2462

0.896

391

0.462

0

ACIAD2210

rpmE

50S ribosomal protein L31

526

0.534

516

0.978

392

0.460

0

ACIAD2045

bioB

biotin synthetase

2.8.1.6

383

0.586

1645

0.934

393

0.460

0

ACIAD0741

nuoL

NADH dehydrogenase I chain L

7.1.1.2

434

0.560

1145

0.954

394

0.460

0

ACIAD3363

mraY

phospho-N-acetylmuramoyl-pentapeptide transferase

2.7.8.13

380

0.586

1645

0.934

395

0.460

0

ACIAD3088

putative tRNA threonylcarbamoyladenosine dehydratase (tcdA)

160

0.704

2911

0.851

396

0.459

0

ACIAD2595

cysW

sulfate transport protein (ABC superfamily, membrane)

509

0.538

746

0.972

397

0.458

0

ACIAD1059

putative ABC transporter permease

506

0.539

746

0.972

398

0.458

0

ACIAD0742

nuoM

NADH dehydrogenase I chain M, membrane subunit

7.1.1.2

440

0.559

1145

0.954

399

0.458

0

ACIAD0643

accD

acetylCoA carboxylase, beta subunit

6.4.1.2

412

0.569

1435

0.945

400

0.458

0

ACIAD3037

trxA

thioredoxin

444

0.557

1145

0.954

401

0.457

0

ACIAD1332

tsaD

tRNA N6-adenosine threonylcarbamoyltransferase

3.4.24.57

538

0.530

516

0.978

402

0.457

0

ACIAD0730

nuoA

NADH dehydrogenase I chain A

7.1.1.2

445

0.557

1145

0.954

403

0.457

0

ACIAD0564

conserved hypothetical protein; putative PQQ enzyme repeat domain protein

353

0.596

1911

0.922

404

0.457

0

ACIAD3572

nusB

transcription termination, L factor (N utilization substance protein B)

525

0.534

669

0.975

405

0.457

0

ACIAD3041

pheT

phenylalanyl-tRNA synthetase, beta subunit

6.1.1.20

521

0.534

707

0.974

406

0.456

0

ACIAD1892

putative intracellular sulfur oxidation protein (DsrE-like)

448

0.557

1145

0.954

407

0.456

0

ACIAD1131

conserved hypothetical protein; putative signal peptide

539

0.530

516

0.978

408

0.456

0

ACIAD0858

putative biotin biosynthesis protein (BioC)

349

0.598

1989

0.920

409

0.456

0

ACIAD3557

phoB

positive response regulator for the pho regulon, autophosphorylates and phosphorylates sensor PhoR

218

0.659

2660

0.877

410

0.456

0

ACIAD3014

sspA

stringent starvation protein A

113

0.739

3048

0.827

411

0.455

0

ACIAD2945

putative outer membrane protein oprM precursor

205

0.669

2796

0.870

412

0.455

0

ACIAD1260

conserved hypothetical protein; putative Zn-dependent protease with chaperone function

297

0.624

2372

0.900

413

0.455

0

ACIAD0738

nuoI

NADH dehydrogenase I chain I, 2Fe-2S ferredoxin-related

7.1.1.2

491

0.542

972

0.966

414

0.455

0

ACIAD0361

pilC

type 4 fimbrial assembly protein

360

0.594

1911

0.922

415

0.455

0

ACIAD3625

putative RND efflux membrane fusion protein precursor

364

0.593

1854

0.923

416

0.455

0

ACIAD1384

recX

regulatory protein

543

0.529

573

0.977

417

0.454

0

ACIAD0802

putative bicyclomycin/multidrug transport protein (MFS superfamily)

356

0.595

1989

0.920

418

0.454

0

ACIAD0416

corC

magnesium and cobalt efflux protein

422

0.564

1435

0.945

419

0.454

0

ACIAD0070

wza

polysaccharide export protein

241

0.647

2616

0.883

420

0.454

0

ACIAD1346

sodB

superoxide dismutase [Fe]

1.15.1.1

359

0.595

1989

0.920

421

0.453

0

ACIAD1219

purB

adenylosuccinate lyase

4.3.2.2

296

0.625

2421

0.898

422

0.453

0

ACIAD3255

hemH

ferrochelatase

4.99.1.1

369

0.591

1911

0.922

423

0.453

0

ACIAD0551

nagZ

beta-N-acetyl-D-glucosaminidase

3.2.1.52

251

0.644

2616

0.883

424

0.452

0

ACIAD3106

leuS

leucyl-tRNA synthetase

6.1.1.4

546

0.528

707

0.974

425

0.451

0

ACIAD1376

dxr

1-deoxy-d-xylulose 5-phosphate reductoisomerase

1.1.1.267

367

0.592

1989

0.920

426

0.451

0

ACIAD3201

rpmD

50S ribosomal protein L30

570

0.522

438

0.980

427

0.451

0

ACIAD3220

rpsJ

30S ribosomal protein S10

473

0.549

1145

0.954

428

0.451

0

ACIAD3227

putative transcriptional regulator,

227

0.657

2747

0.873

429

0.451

0

ACIAD1399

hscA

heat shock protein (Hsp); chaperon involved in the Fe/S cluster biosynthesis

271

0.635

2569

0.887

430

0.450

0

ACIAD2432

rplI

50S ribosomal protein L9

605

0.510

291

0.990

431

0.449

0

ACIAD0740

nuoK

NADH-quinone oxidoreductase chain K (NADH dehydrogenase I, chain K) (NDH-1, chain K) (NUO11)

1.6.5.11

478

0.548

1145

0.954

432

0.449

0

ACIAD3249

ribA

GTP cyclohydrolase II

3.5.4.25

407

0.572

1645

0.934

433

0.449

0

ACIAD1362

clpS

substrate modulator for ClpAP, directs protease activity towards aggregated proteins

231

0.654

2747

0.873

434

0.448

0

ACIAD0890

trxB

thioredoxin reductase 1

1.8.1.9

541

0.529

832

0.970

435

0.448

0

ACIAD3135

putative tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein mnmC

310

0.617

2462

0.896

436

0.446

0

ACIAD0567

putative acyltransferase

2.3.1.-

622

0.505

291

0.990

437

0.445

0

ACIAD0469

leuB

3-isopropylmalate dehydrogenase

1.1.1.85

661

0.495

1

1.000

438

0.445

0

ACIAD0013

tyrS

tyrosyl-tRNA synthetase

6.1.1.1

660

0.495

1

1.000

439

0.445

0

ACIAD3194

rpoA

RNA polymerase, alpha subunit

2.7.7.6

559

0.524

795

0.971

440

0.445

0

ACIAD3366

ftsI

septum formation, penicillin binding protein 3, peptidoglycan synthetase

2.4.1.129

458

0.554

1435

0.945

441

0.445

0

ACIAD2043

conserved hypothetical protein; putative ferredoxin

325

0.609

2372

0.900

442

0.444

0

ACIAD3403

putative homoserine kinase (ThrB)

2.7.1.39

582

0.517

573

0.977

443

0.444

0

ACIAD1645

trmA

tRNA (uracil-5-)-methyltransferase

2.1.1.35

552

0.527

915

0.967

444

0.443

0

ACIAD1112

conserved hypothetical protein; putative enzyme with aromatic-ring-opening dioxygenase domain

482

0.546

2321

0.901

445

0.443

7

ACIAD1061

mtgA

monofunctional biosynthetic peptidoglycan transglycosylase

2.4.2.-

141

0.717

3041

0.828

446

0.443

0

ACIAD0859

bioD

dethiobiotin synthetase (Dethiobiotin synthase) (DTB synthetase) (DTBS)

6.3.3.3

424

0.564

1645

0.934

447

0.442

0

ACIAD0125

conserved hypothetical protein; putative membrane protein

399

0.577

1854

0.923

448

0.442

0

ACIAD0095

per

perosamine synthetase (WeeJ)

507

0.538

1251

0.953

449

0.441

0

ACIAD2665

conserved hypothetical protein; putative membrane protein

575

0.520

832

0.970

450

0.440

0

ACIAD2580

era

GTP-binding protein,16S rRNA-binding,ribosome-associated GTPase

610

0.509

438

0.980

451

0.440

0

ACIAD0302

rplK

50S ribosomal protein L11

492

0.542

1402

0.949

452

0.440

0

ACIAD0042

putative oxoacyl-(acyl carrier protein) reductase

1.1.1.100

433

0.561

1645

0.934

453

0.440

0

ACIAD0004

gyrB

DNA gyrase, subunit B (type II topoisomerase)

5.6.2.2

608

0.509

438

0.980

454

0.440

0

ACIAD2374

miaA

delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase

2.5.1.75

590

0.514

707

0.974

455

0.439

0

ACIAD1305

putative glutathionine S-transferase

2.5.1.18

267

0.636

2670

0.876

456

0.439

0

ACIAD0913

YggS

Pyridoxal phosphate homeostasis protein

442

0.558

1618

0.935

457

0.439

0

ACIAD3182

prlC

oligopeptidase A

3.4.24.70

666

0.493

149

0.994

458

0.438

0

ACIAD2452

putative hydroxyacylglutathione hydrolase (GloB)

3.1.2.6

611

0.509

516

0.978

459

0.438

0

ACIAD3193

rplQ

50S ribosomal protein L17

684

0.486

1

1.000

460

0.438

0

ACIAD1216

putative protease (SohB)

3.4.21.-

338

0.602

2421

0.898

461

0.437

0

ACIAD0660

murA

UDP-N-acetylglucosamine 1-carboxyvinyltransferase (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)

2.5.1.7

488

0.544

1435

0.945

462

0.437

0

ACIAD0306

rplL

50S ribosomal protein L7/L12

612

0.508

516

0.978

463

0.437

0

ACIAD3214

rplV

50S ribosomal protein L22

623

0.505

374

0.981

464

0.437

0

ACIAD1944

conserved hypothetical protein

632

0.503

374

0.981

465

0.436

0

ACIAD0706

ppiC

peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase)

5.2.1.8

385

0.586

2169

0.909

466

0.436

0

ACIAD0488

conserved hypothetical protein; putative SlyX protein

667

0.493

248

0.992

467

0.436

0

ACIAD1980

tal

transaldolase

2.2.1.2

537

0.530

1145

0.954

468

0.435

0

ACIAD1408

hupB

DNA-binding protein HU-beta

606

0.510

707

0.974

469

0.435

0

ACIAD1221

trmU

tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase

2.1.1.61

689

0.483

1

1.000

470

0.435

0

ACIAD0685

rpe

D-ribulose-5-phosphate 3-epimerase

5.1.3.1

534

0.531

1145

0.954

471

0.435

0

ACIAD0209

putative Rossmann-fold nucleotide-binding protein involved in DNA uptake (Smf)

419

0.567

1854

0.923

472

0.435

0

ACIAD3516

murC

UDP-N-acetylmuramate--alanine ligase

6.3.2.8

497

0.541

1435

0.945

473

0.435

0

ACIAD0847

putative cell division protein (ZipA-like)

673

0.490

248

0.992

474

0.434

0

ACIAD0609

aspS

aspartyl-tRNA synthetase

6.1.1.12, 6.1.1.23, 6.1.1.-

626

0.504

516

0.978

475

0.434

0

ACIAD0398

recB

exonuclease V, beta chain

3.1.11.5

500

0.539

1435

0.945

476

0.434

0

ACIAD0173

rhtB

homoserine/homoserine lactone efflux protein

279

0.632

2747

0.873

477

0.434

0

ACIAD0114

dadR

transcriptional regulator for dadAX gene cluster (AsnC family)

532

0.531

1251

0.953

478

0.434

0

ACIAD3062

folK

2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase) (HPPK) (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase) (PPPK)

2.7.6.3

602

0.510

795

0.971

479

0.433

0

ACIAD0912

pilT

twitching motility protein

452

0.555

1747

0.932

480

0.433

0

ACIAD2319

putative porin precursor

423

0.564

1911

0.922

481

0.432

0

ACIAD1063

estR

esterase operon transcriptional regulator (LysR family)

98

0.754

3163

0.798

482

0.432

0

ACIAD3200

rplO

50S ribosomal protein L15

674

0.490

291

0.990

483

0.432

0

ACIAD2893

coaD

phosphopantetheine adenylyltransferase

2.7.7.3

515

0.536

1435

0.945

484

0.431

0

ACIAD1165

putative transcriptional regulator, luxR family

635

0.501

573

0.977

485

0.431

0

ACIAD3235

recG

ATP-dependent DNA helicase

513

0.536

1435

0.945

486

0.431

0

ACIAD3506

aceF

dihydrolipoamide S-acetyltransferase, E2 component of the pyruvate dehydrogenase complex

2.3.1.12

648

0.498

438

0.980

487

0.431

0

ACIAD3594

conserved hypothetical protein; putative diguanylate cyclase/phosphodiesterase

342

0.602

2521

0.892

488

0.431

0

ACIAD3047

rpmI

50S ribosomal protein L35

706

0.477

1

1.000

489

0.430

0

ACIAD2635

purN

phosphoribosylglycinamide formyltransferase 1

2.1.2.2

519

0.535

1435

0.945

490

0.430

0

ACIAD1266

ilvD

dihydroxy-acid dehydratase

4.2.1.9

557

0.525

1145

0.954

491

0.430

0

ACIAD3414

putative integrase

375

0.589

2321

0.901

492

0.430

0

ACIAD3684

rpmH

50S ribosomal protein L34

705

0.477

1

1.000

493

0.430

0

ACIAD2655

etfB

electron transfer flavoprotein beta-subunit

489

0.544

1521

0.936

494

0.429

0

ACIAD2474

hemE

uroporphyrinogen decarboxylase

4.1.1.37

428

0.563

1989

0.920

495

0.429

0

ACIAD3219

rplC

50S ribosomal protein L3

647

0.498

516

0.978

496

0.429

0

ACIAD1873

putative transport protein (ABC superfamily, ATP_bind)

621

0.505

832

0.970

497

0.428

0

ACIAD1372

pyrH

uridylate kinase

2.7.4.-

662

0.494

438

0.980

498

0.428

0

ACIAD0746

putative transcriptional regulator (LysR family)

477

0.548

1747

0.932

499

0.428

0

ACIAD2740

putative transcriptional regulator (TetR/AcrR family)

386

0.586

2372

0.900

500

0.427

0

ACIAD0291

putative DNA binding protein

578

0.518

1108

0.958

501

0.427

0

PhyloProfile Search: ACIAD1115