Comparative Genomics

Label	Gene	Product	EC number	MCC rank	MCC	Distance rank	Distance	Rank	Correlation score	NbOrgInSynt
ACIAD2615	ruvB	holliday junction helicase, subunit B		1	1.000	1	1.000	2	1.000	825
ACIAD0891		putative cell division protein, required for chromosome partitioning (FstK)		2	0.853	1	1.000	3	0.768	0
ACIAD0644	folC	bifunctional protein [Includes: folylpolyglutamate synthase (FPGS); dihydrofolate synthase ].	6.3.2.17, 6.3.2.12	4	0.842	1	1.000	4	0.758	0
ACIAD2664	radA	DNA repair protein		16	0.786	995	0.969	5	0.739	7
ACIAD3041	pheT	phenylalanyl-tRNA synthetase, beta subunit	6.1.1.20	3	0.850	732	0.976	6	0.729	0
ACIAD0359	coaE	dephosphocoenzyme A kinase	2.7.1.24	7	0.806	1	1.000	7	0.726	0
ACIAD3202	rpsE	30S ribosomal protein S5		8	0.805	1	1.000	8	0.724	0
ACIAD3042	pheS	phenylalanyl-tRNA synthetase, alpha-subunit	6.1.1.20	13	0.789	1	1.000	9	0.710	0
ACIAD3503	guaB	IMP dehydrogenase	1.1.1.205	14	0.787	1	1.000	10	0.709	0
ACIAD1372	pyrH	uridylate kinase	2.7.4.-	17	0.784	1	1.000	11	0.706	0
ACIAD1253	alaS	alanyl-tRNA synthetase	6.1.1.7	5	0.824	732	0.976	12	0.706	0
ACIAD2312	recR	recombination protein, gap repair		10	0.802	362	0.984	13	0.698	0
ACIAD1373	frr	ribosome releasing factor		6	0.810	567	0.977	14	0.695	0
ACIAD2561		putative GTP-binding protein (Obg)		42	0.729	732	0.976	15	0.694	6
ACIAD2838	groEL	chaperone Hsp60, peptide-dependent ATPase, heat shock protein		19	0.768	1	1.000	16	0.692	0
ACIAD1385	recA	DNA strand exchange and recombination protein with protease and nuclease activity.		21	0.768	1	1.000	17	0.692	0
ACIAD2580	era	GTP-binding protein,16S rRNA-binding,ribosome-associated GTPase		92	0.691	1	1.000	18	0.691	6
ACIAD2269	rpsB	30S ribosomal protein S2		9	0.804	567	0.977	19	0.691	0
ACIAD3213	rpsC	30S ribosomal protein S3		12	0.792	362	0.984	20	0.689	0
ACIAD2557	dusB	tRNA-dihydrouridine synthase B	1.-.-.-	59	0.716	567	0.977	21	0.683	5
ACIAD0368	nusA	transcription termination/antitermination, L factor (N utilization substance protein A)		27	0.757	1	1.000	22	0.681	0
ACIAD3076		conserved hypothetical protein		29	0.753	1	1.000	23	0.678	0
ACIAD2569	uvrB	excinuclease ABC subunit B (ATP-dependent DNA excision repair enzyme UvrAC)		76	0.700	362	0.984	24	0.677	6
ACIAD3365	murE	UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase	6.3.2.13	30	0.752	1	1.000	25	0.677	0
ACIAD0354	recN	DNA repair protein RecN		18	0.776	362	0.984	26	0.676	0
ACIAD3637	fmt	methionyl-tRNA formyltransferase	2.1.2.9	15	0.787	567	0.977	27	0.676	0
ACIAD2584	lepA	GTP-binding protein		68	0.707	732	0.976	28	0.673	6
ACIAD0565		putative GTP-binding protein EngA		32	0.746	1	1.000	29	0.671	0
ACIAD3046	rplT	50S ribosomal protein L20, also posttranslational autoregulator		22	0.767	362	0.984	30	0.668	0
ACIAD1265	clpB	ATP-dependent protease, Hsp 100, part of multi-chaperone system with DnaK, DnaJ, and GrpE		25	0.759	284	0.989	31	0.668	0
ACIAD0913	YggS	Pyridoxal phosphate homeostasis protein		28	0.755	284	0.989	32	0.665	0
ACIAD2374	miaA	delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase	2.5.1.75	36	0.737	1	1.000	33	0.664	0
ACIAD1395	mfd	transcription-repair coupling protein		23	0.763	362	0.984	34	0.664	0
ACIAD2432	rplI	50S ribosomal protein L9		38	0.735	1	1.000	35	0.661	0
ACIAD2894	smpB	ssrA-binding protein (Small protein B)		20	0.768	567	0.977	36	0.660	0
ACIAD0884	fusA	protein chain elongation factor EF-G, GTP-binding		39	0.734	1	1.000	37	0.660	0
ACIAD3596		putative ATPase		11	0.799	1255	0.957	38	0.659	0
ACIAD0301	nusG	transcription antitermination protein		31	0.747	284	0.989	39	0.658	0
ACIAD2635	purN	phosphoribosylglycinamide formyltransferase 1	2.1.2.2	128	0.655	1	1.000	40	0.655	7
ACIAD3517	murG	UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase	2.4.1.227	44	0.728	1	1.000	41	0.655	0
ACIAD3212	rplP	50S ribosomal protein L16		46	0.727	1	1.000	42	0.654	0
ACIAD2893	coaD	phosphopantetheine adenylyltransferase	2.7.7.3	47	0.726	1	1.000	43	0.653	0
ACIAD0703	typA	GTP-binding elongation factor family protein		24	0.759	732	0.976	44	0.651	0
ACIAD3371	gltX	glutamyl-tRNA synthetase	6.1.1.17, 6.1.1.24	51	0.722	1	1.000	45	0.650	0
ACIAD0304	rplA	50S ribosomal protein L1		26	0.757	732	0.976	46	0.649	0
ACIAD3204	rplF	50S ribosomal protein L6		54	0.719	1	1.000	47	0.647	0
ACIAD3366	ftsI	septum formation, penicillin binding protein 3, peptidoglycan synthetase	2.4.1.129	56	0.717	1	1.000	48	0.646	0
ACIAD3068	relA	GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp synthetase I) ((p)ppGpp synthetase)	2.7.6.5	35	0.740	362	0.984	49	0.645	0
ACIAD0685	rpe	D-ribulose-5-phosphate 3-epimerase	5.1.3.1	57	0.717	1	1.000	50	0.645	0
ACIAD2101		putative 3-oxoacyl-[acyl-carrier-protein] synthase III	2.3.1.41	60	0.715	1	1.000	51	0.644	0
ACIAD2909	pth	peptidyl-tRNA hydrolase	3.1.1.29	41	0.730	284	0.989	52	0.643	0
ACIAD2583	lepB	leader peptidase (signal peptidase I) , serine protease	3.4.21.89	120	0.664	362	0.984	53	0.643	6
ACIAD2938	rpmA	50S ribosomal protein L27		62	0.713	1	1.000	54	0.641	0
ACIAD0660	murA	UDP-N-acetylglucosamine 1-carboxyvinyltransferase (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)	2.5.1.7	65	0.710	1	1.000	55	0.639	0
ACIAD0432		putative heme chaperone HemW like		33	0.742	567	0.977	56	0.638	0
ACIAD0001	dnaA	Chromosomal replication initiator protein dnaA		34	0.742	567	0.977	57	0.638	0
ACIAD2853	ftsH	cell division protein	3.4.24.-	52	0.722	284	0.989	58	0.635	0
ACIAD0472	infA	protein chain initiation factor IF-1		71	0.705	1	1.000	59	0.635	0
ACIAD3313	rpsP	30S ribosomal protein S16		72	0.704	1	1.000	60	0.633	0
ACIAD0848	ligA	DNA ligase	6.5.1.2	37	0.736	732	0.976	61	0.631	0
ACIAD0188	atpC	membrane-bound ATP synthase , F1 sector, epsilon-subunit	7.1.2.2	48	0.725	362	0.984	62	0.631	0
ACIAD3055	thrS	threonyl-tRNA synthetase	6.1.1.3	75	0.700	1	1.000	63	0.630	0
ACIAD0185	atpA	membrane-bound ATP synthase , F1 sector, alpha-subunit	7.1.2.2	78	0.699	1	1.000	64	0.629	0
ACIAD3235	recG	ATP-dependent DNA helicase		80	0.698	1	1.000	65	0.628	0
ACIAD0883	rpsG	30S ribosomal protein S7		53	0.720	362	0.984	66	0.627	0
ACIAD3199	secY	secretion protein		63	0.712	284	0.989	67	0.627	0
ACIAD3220	rpsJ	30S ribosomal protein S10		43	0.729	567	0.977	68	0.626	0
ACIAD1389	rpsT	30S ribosomal protein S20		84	0.694	1	1.000	69	0.625	0
ACIAD1130		putative methyltransferase		83	0.694	1	1.000	70	0.625	0
ACIAD0557	rlmN	23S rRNA adenosine methyltransferase	2.1.1.-	40	0.732	846	0.974	71	0.625	0
ACIAD0023	ribF	bifunctional protein [Includes: riboflavin kinase (Flavokinase); FMN adenylyltransferase (FAD pyrophosphorylase) (FAD synthetase)]	2.7.1.26, 2.7.7.2	85	0.694	1	1.000	72	0.625	0
ACIAD3502	glmM	phosphoglucosamine mutase	5.4.2.10	55	0.718	362	0.984	73	0.625	0
ACIAD2418	prfA	peptide chain release factor 1		66	0.709	284	0.989	74	0.624	0
ACIAD0021	lspA	prolipoprotein signal peptidase (Signal peptidase II.)	3.4.23.36	58	0.716	362	0.984	75	0.624	0
ACIAD3209	rplN	50S ribosomal protein L14		88	0.692	1	1.000	76	0.623	0
ACIAD3218	rplD	50S ribosomal protein L4, regulates expression of S10 operon		89	0.692	1	1.000	77	0.623	0
ACIAD3516	murC	UDP-N-acetylmuramate--alanine ligase	6.3.2.8	91	0.692	1	1.000	78	0.622	0
ACIAD2939	rplU	50S ribosomal protein L21		49	0.725	732	0.976	79	0.621	0
ACIAD0900	rep	ATP-dependent DNA helicase	3.6.1.-	93	0.690	1	1.000	80	0.621	0
ACIAD0533	tig	trigger factor, molecular chaperone involved in septum formation		64	0.712	362	0.984	81	0.620	0
ACIAD3363	mraY	phospho-N-acetylmuramoyl-pentapeptide transferase	2.7.8.13	50	0.724	732	0.976	82	0.620	0
ACIAD0402	pnp	polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase)	2.7.7.8	95	0.687	1	1.000	83	0.618	0
ACIAD1100		putative methyltransferase		70	0.706	362	0.984	84	0.615	0
ACIAD3210	rpsQ	30S ribosomal protein S17		97	0.683	1	1.000	85	0.615	0
ACIAD2430	rpsF	30S ribosomal protein S6		101	0.681	1	1.000	86	0.613	0
ACIAD0871	fabG	3-oxoacyl-[acyl-carrier-protein] reductase	1.1.1.100	102	0.680	1	1.000	87	0.612	0
ACIAD1258	purA	adenylosuccinate synthetase	6.3.4.4	73	0.701	362	0.984	88	0.611	0
ACIAD3013	rpsI	30S ribosomal protein S9		74	0.701	362	0.984	89	0.610	0
ACIAD0270	murD	UDP-N-acetylmuramoylalanine-D-glutamate ligase	6.3.2.9	105	0.678	1	1.000	90	0.610	0
ACIAD3515	ddlB	D-alanine-D-alanine ligase B	6.3.2.4	87	0.693	284	0.989	91	0.610	0
ACIAD0357		putative tRNA/rRNA methyltransferase	2.1.1.-	107	0.676	1	1.000	92	0.609	0
ACIAD3654	dnaK	chaperone Hsp70 in DNA biosynthesis/cell division		106	0.677	1	1.000	93	0.609	0
ACIAD3037	trxA	thioredoxin		108	0.675	1	1.000	94	0.608	0
ACIAD3030	polA	DNA polymerase I, 3' --> 5' polymerase, 5' --> 3' and 3'--> 5' exonuclease	2.7.7.7	67	0.708	567	0.977	95	0.608	0
ACIAD2634	purM	phosphoribosylaminoimidazole synthetase	6.3.3.1	141	0.641	846	0.974	96	0.608	7
ACIAD3324	gmk	guanylate kinase	2.7.4.8	61	0.713	846	0.974	97	0.608	0
ACIAD0002	dnaN	DNA polymerase III, beta chain	2.7.7.7	69	0.706	567	0.977	98	0.607	0
ACIAD3364	murF	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (UDP-MurNAc-pentapeptide synthetase) (D-alanyl-D- alanine-adding enzyme)	6.3.2.10	109	0.675	1	1.000	99	0.607	0
ACIAD0648	secA	preprotein translocase, secretion protein of IISP family		82	0.696	362	0.984	100	0.606	0
ACIAD2839	groES	chaperone Hsp10, affects cell division		113	0.673	1	1.000	101	0.605	0
ACIAD2089	dnaE	DNA polymerase III, alpha chain	2.7.7.7	115	0.670	1	1.000	102	0.603	0
ACIAD3193	rplQ	50S ribosomal protein L17		96	0.684	284	0.989	103	0.603	0
ACIAD2348	cmk	cytidylate kinase (cytidine monophosphate (CMP) kinase)	2.7.4.25	116	0.669	1	1.000	104	0.602	0
ACIAD0535	clpX	ATP-dependent Clp protease ATP-binding subunit		90	0.692	362	0.984	105	0.602	0
ACIAD3257	murI	glutamate racemase	5.1.1.3	117	0.667	1	1.000	106	0.601	0
ACIAD2037	metK	methionine adenosyltransferase	2.5.1.6	77	0.699	567	0.977	107	0.600	0
ACIAD0209		putative Rossmann-fold nucleotide-binding protein involved in DNA uptake (Smf)		79	0.698	567	0.977	108	0.600	0
ACIAD0609	aspS	aspartyl-tRNA synthetase	6.1.1.12, 6.1.1.23, 6.1.1.-	81	0.697	567	0.977	109	0.599	0
ACIAD2448	purD	phosphoribosylamine--glycine ligase (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase)	6.3.4.13	45	0.727	1368	0.956	110	0.598	0
ACIAD0493	topA	DNA topoisomerase type I, omega protein	5.6.2.1	118	0.665	1	1.000	111	0.598	0
ACIAD2589		conserved hypothetical protein; putative periplasmic solute-binding protein		169	0.616	362	0.984	112	0.596	6
ACIAD0306	rplL	50S ribosomal protein L7/L12		86	0.694	567	0.977	113	0.596	0
ACIAD2350		putative deaminase		122	0.661	1	1.000	114	0.595	0
ACIAD3194	rpoA	RNA polymerase, alpha subunit	2.7.7.6	122	0.661	1	1.000	115	0.595	0
ACIAD3201	rpmD	50S ribosomal protein L30		98	0.682	548	0.982	116	0.593	0
ACIAD3500	recJ	ssDNA exonuclease, 5' --> 3' specific , Mg dependent	3.1.-.-	94	0.690	732	0.976	117	0.592	0
ACIAD2433	dnaB	replicative DNA helicase;chromosome replication, chain elongation		125	0.655	1	1.000	118	0.590	0
ACIAD1377		putative membrane-associated Zn-dependent proteases 1		129	0.654	1	1.000	119	0.589	0
ACIAD2447	purH	bifunctional protein [Includes: phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR transformylase); IMP cyclohydrolase (Inosinicase) (IMP synthetase) (ATIC)]	2.1.2.3, 3.5.4.10	131	0.653	1	1.000	120	0.588	0
ACIAD1317	gpsA	glycerol-3-phosphate dehydrogenase, biosynthetic	1.1.1.94	110	0.675	362	0.984	121	0.588	0
ACIAD0479	asd	aspartate-semialdehyde dehydrogenase, NAD(P)-binding	1.2.1.11	134	0.652	1	1.000	122	0.587	0
ACIAD0004	gyrB	DNA gyrase, subunit B (type II topoisomerase)	5.6.2.2	133	0.652	1	1.000	123	0.587	0
ACIAD3012	rplM	50S ribosomal protein L13		100	0.682	567	0.977	124	0.586	0
ACIAD3203	rplR	50S ribosomal protein L18		112	0.673	362	0.984	125	0.586	0
ACIAD3207	rplE	50S ribosomal protein L5		111	0.673	362	0.984	126	0.586	0
ACIAD2581	rnc	ribonuclease III, ds RNA	3.1.26.3	185	0.604	362	0.984	127	0.584	6
ACIAD3197	rpsM	30S ribosomal protein S13		114	0.670	362	0.984	128	0.584	0
ACIAD2899	dnaG	DNA primase	2.7.7.-	124	0.660	284	0.989	129	0.581	0
ACIAD0534	clpP	ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp) (Caseinolytic protease) (Protease Ti) (Heat shock protein F21.5)	3.4.21.92	138	0.644	1	1.000	130	0.580	0
ACIAD1248	rnhB	RNAse HII	3.1.26.4	104	0.678	846	0.974	131	0.579	0
ACIAD3236		putative DNA transformation protein (ComF)		103	0.679	846	0.974	132	0.579	0
ACIAD0352	yqgF	holliday junction resolvase yqgF-like	3.1.-.-	119	0.664	362	0.984	133	0.578	0
ACIAD0180	atpB	membrane-bound ATP synthase, F0 sector, subunit a, important for FO assembly	7.1.2.2	121	0.662	362	0.984	134	0.577	0
ACIAD0677		putative glycoprotein endopeptidase metalloprotease	3.4.-.-	130	0.653	284	0.989	135	0.575	0
ACIAD0187	atpD	membrane-bound ATP synthase , F1 sector, beta-subunit	7.1.2.2	144	0.639	1	1.000	136	0.575	0
ACIAD3200	rplO	50S ribosomal protein L15		147	0.636	1	1.000	137	0.572	0
ACIAD2652	gyrA	DNA gyrase, subunit A, type II topoisomerase	5.6.2.2	214	0.571	1	1.000	138	0.571	7
ACIAD3054	infC	protein chain initiation factor IF-3		152	0.633	1	1.000	139	0.570	0
ACIAD3160		putative metalloprotease ybeY-like	3.4.24.-	132	0.653	362	0.984	140	0.568	0
ACIAD2862	greA	transcription elongation factor, cleaves 3' nucleotide of paused mRNA		154	0.631	1	1.000	141	0.568	0
ACIAD2633		putative permease (PerM family)		201	0.585	362	0.984	142	0.566	7
ACIAD1408	hupB	DNA-binding protein HU-beta		142	0.641	284	0.989	143	0.565	0
ACIAD3208	rplX	50S ribosomal protein L24		156	0.628	1	1.000	144	0.565	0
ACIAD3214	rplV	50S ribosomal protein L22		136	0.649	362	0.984	145	0.565	0
ACIAD1332	tsaD	tRNA N6-adenosine threonylcarbamoyltransferase	3.4.24.57	137	0.647	362	0.984	146	0.564	0
ACIAD2639	comA	competence factor involved in DNA uptake		206	0.582	362	0.984	147	0.563	5
ACIAD0870	fabD	malonyl-CoA-[acyl-carrier-protein] transacylase	2.3.1.39	143	0.640	284	0.989	148	0.563	0
ACIAD3215	rpsS	30S ribosomal protein S19		157	0.625	1	1.000	149	0.563	0
ACIAD3062	folK	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase) (HPPK) (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase) (PPPK)	2.7.6.3	99	0.682	1368	0.956	150	0.561	0
ACIAD2368	gidB	glucose-inhibited division protein B (methyltransferase)	2.1.-.-	160	0.624	1	1.000	151	0.561	0
ACIAD3219	rplC	50S ribosomal protein L3		146	0.638	284	0.989	152	0.561	0
ACIAD2365	msbA	lipid transport protein, flippase (ABC superfamily, membrane (N-terminal), atp_bind (C-terminal))		150	0.635	284	0.989	153	0.559	0
ACIAD2313		putative nucleoid-associated protein (YbaB like)		127	0.655	846	0.974	154	0.559	0
ACIAD0342	pgsA	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase)	2.7.8.5	126	0.655	846	0.974	155	0.559	0
ACIAD3216	rplB	50S ribosomal protein L2		139	0.642	362	0.984	156	0.559	0
ACIAD0186	atpG	membrane-bound ATP synthase , F1 sector, gamma-subunit	7.1.2.2	151	0.633	284	0.989	157	0.558	0
ACIAD2071		putative GTP-binding protein		135	0.650	732	0.976	158	0.557	0
ACIAD2431	rpsR	30S ribosomal protein S18		167	0.616	1	1.000	159	0.555	0
ACIAD3368	mraW	Ribosomal RNA small subunit methyltransferase H	2.1.1.-	155	0.631	284	0.989	160	0.555	0
ACIAD2897	rluD	ribosomal large subunit pseudouridine synthase D (Pseudouridylate synthase) (Uracil hydrolyase)	4.2.1.70	172	0.614	1	1.000	161	0.553	0
ACIAD3310	rplS	50S ribosomal protein L19		148	0.636	362	0.984	162	0.553	0
ACIAD3449	ssb	ssDNA-binding protein controls activity of RecBCD nuclease		140	0.642	732	0.976	163	0.550	0
ACIAD0369	infB	protein chain initiation factor IF-2		179	0.610	1	1.000	164	0.549	0
ACIAD0474	truA	tRNA-pseudouridine synthase I	4.2.1.70	180	0.608	1	1.000	165	0.547	0
ACIAD3038	rho	transcription termination factor		184	0.605	1	1.000	166	0.545	0
ACIAD3034	tilS	tRNA(Ile)-lysidine synthetase		166	0.617	284	0.989	167	0.543	0
ACIAD2052		putative transcriptional regulator (YebC like)		159	0.624	362	0.984	168	0.543	0
ACIAD0151	guaA	GMP synthetase (glutamine aminotransferase)	6.3.5.2, 6.3.5.2	186	0.603	1	1.000	169	0.543	0
ACIAD3681	oxaA	Inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the Sec translocase		161	0.623	362	0.984	170	0.543	0
ACIAD3205	rpsH	30S ribosomal protein S8		170	0.616	284	0.989	171	0.542	0
ACIAD0013	tyrS	tyrosyl-tRNA synthetase	6.1.1.1	189	0.601	1	1.000	172	0.541	0
ACIAD0367		Putative ribosome maturation factor RimP		145	0.638	1079	0.967	173	0.537	0
ACIAD0246	nrdR	Transcriptional repressor nrdR		165	0.617	362	0.984	174	0.537	0
ACIAD0305	rplJ	50S ribosomal protein L10		171	0.616	362	0.984	175	0.536	0
ACIAD1927	pgk	phosphoglycerate kinase	2.7.2.3	173	0.614	362	0.984	176	0.535	0
ACIAD3354	aroK	shikimate-kinase	2.7.1.71	174	0.614	362	0.984	177	0.535	0
ACIAD2560	proB	gamma-glutamyl kinase	2.7.2.11	225	0.564	846	0.974	178	0.534	6
ACIAD1405	iscR	repressor of the iscRSUA operon, involved in assembly of Fe-S clusters		158	0.624	846	0.974	179	0.533	0
ACIAD0302	rplK	50S ribosomal protein L11		162	0.622	732	0.976	180	0.533	0
ACIAD3106	leuS	leucyl-tRNA synthetase	6.1.1.4	178	0.611	362	0.984	181	0.532	0
ACIAD2925	rpoD	sigma D (sigma 70) factor of RNA polymerase , major sigma factor during exponential growth		197	0.589	1	1.000	182	0.530	0
ACIAD0364	secG	preprotein translocase IISP family, auxillary membrane component		181	0.607	362	0.984	183	0.529	0
ACIAD3508		putative peptidase		182	0.606	362	0.984	184	0.528	0
ACIAD2255	glyA	serine hydroxymethyltransferase	2.1.2.1	164	0.618	846	0.974	185	0.527	0
ACIAD1404	iscS	cysteine desulfurase used in synthesis of Fe-S cluster (tRNA 4-thiouridine sulfurtransferase )	4.4.1.-	190	0.598	284	0.989	186	0.527	0
ACIAD0363	tpiA	triosephosphate isomerase	5.3.1.1	177	0.612	567	0.977	187	0.526	0
ACIAD3047	rpmI	50S ribosomal protein L35		203	0.583	1	1.000	188	0.525	0
ACIAD0249	ribC	riboflavin synthase alpha chain	2.5.1.9	204	0.583	1	1.000	189	0.525	0
ACIAD0003	recF	DNA replication, recombinaison and repair protein		187	0.603	362	0.984	190	0.525	0
ACIAD3125	dfp	bifunctional protein [Includes: 4'-phosphopantothenoylcysteine decarboxylase; phosphopantothenoylcysteine synthetase, FMN-binding]	4.1.1.36, 6.3.2.5	149	0.635	1368	0.956	191	0.523	0
ACIAD2852	folP	7,8-dihydropteroate synthase	2.5.1.15	205	0.582	1	1.000	192	0.523	0
ACIAD3455	uvrA	excinuclease ABC subunit A		188	0.602	548	0.982	193	0.523	0
ACIAD3069	rumA	23S rRNA (Uracil-5-)-methyltransferase(23S rRNA(M- 5-U1939)-methyltransferase)	2.1.1.-	176	0.613	995	0.969	194	0.519	0
ACIAD3005	hflX	GTP-binding protein		168	0.616	1079	0.967	195	0.519	0
ACIAD2907	prs	ribose-phosphate pyrophosphokinase (Phosphoribosyl pyrophosphate synthetase)	2.7.6.1	183	0.606	732	0.976	196	0.519	0
ACIAD2359		conserved hypothetical protein; putative deoxyribonuclease		217	0.569	1	1.000	197	0.512	0
ACIAD3558	phoR	two-component sensor	2.7.3.-	153	0.632	1688	0.947	198	0.511	0
ACIAD2347	rpsA	30S ribosomal protein S1		219	0.567	1	1.000	199	0.510	0
ACIAD0401	rpsO	30S ribosomal protein S15		221	0.567	1	1.000	200	0.510	0
ACIAD3572	nusB	transcription termination, L factor (N utilization substance protein B)		193	0.594	567	0.977	201	0.510	0
ACIAD3196	rpsK	30S ribosomal protein S11		224	0.564	1	1.000	202	0.508	0
ACIAD0409	priA	primosomal protein N' (= factor Y) directs replication fork assembly at D-loops, ATP-dependent.		196	0.589	567	0.977	203	0.506	0
ACIAD3621	dnaJ	heat shock protein (Hsp40), co-chaperone with DnaK		229	0.562	1	1.000	204	0.506	0
ACIAD3158		putative tRNA-i(6)A37 modification enzyme (MiaB)		233	0.561	1	1.000	205	0.505	0
ACIAD3312	rimM	16S rRNA processing protein		208	0.580	362	0.984	206	0.505	0
ACIAD3575	glmU	bifunctional protein [Includes: UDP-N-acetylglucosamine pyrophosphorylase (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase ]	2.7.7.23, 2.3.1.57	175	0.614	1368	0.956	207	0.505	0
ACIAD3195	rpsD	30S ribosomal protein S4		235	0.560	1	1.000	208	0.504	0
ACIAD2041	ruvC	holliday junction nuclease		200	0.585	567	0.977	209	0.503	0
ACIAD0910	fur	negative regulator of ferric iron uptake		162	0.622	1688	0.947	210	0.503	0
ACIAD2376		putative ATPase with strong ADP affinity		210	0.577	362	0.984	211	0.502	0
ACIAD0591	queA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine biosynthesis protein )	5.-.-.-	215	0.570	284	0.989	212	0.502	0
ACIAD2366	spoOJ	chromosome partitioning protein		212	0.575	362	0.984	213	0.501	0
ACIAD0590	tgt	queuine tRNA-ribosyltransferase (tRNA-guanine transglycosylase) (Guanine insertion enzyme)	2.4.2.29	202	0.583	732	0.976	214	0.500	0
ACIAD0340	uvrC	excinuclease ABC subunit C; UvrC with UvrAB is a DNA excision repair enzyme		213	0.574	362	0.984	215	0.500	0
ACIAD0518	lgt	prolipoprotein diacylglyceryl transferase	2.4.99.-	220	0.567	284	0.989	216	0.499	0
ACIAD2896		conserved hypothetical protein		194	0.591	1079	0.967	217	0.498	0
ACIAD1381	fabZ	(3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase	4.2.1.-	246	0.554	1	1.000	218	0.498	0
ACIAD0872	acpP	acyl carrier protein (ACP)		249	0.551	1	1.000	219	0.496	0
ACIAD3606	mutY	A/G specific adenine glycosylase	3.2.2.-	250	0.551	1	1.000	220	0.496	0
ACIAD3659	purE	phosphoribosylaminoimidazole carboxylase, mutase subunit	4.1.1.21	207	0.581	846	0.974	221	0.496	0
ACIAD2284		putative ribosomal RNA small subunit methyltransferase E (rsmE)	2.1.1.-	211	0.577	567	0.977	222	0.495	0
ACIAD2234	mrcB	bifunctional protein [Includes penicillin-insensitive transglycosylase; penicillin-sensitive transpeptidase] (penicillin-binding protein 1B)	2.4.1.129, 3.4.-.-	218	0.568	362	0.984	223	0.495	0
ACIAD3599		putative transcriptional regulator; putative detoxification transcriptional regulator		192	0.596	1255	0.957	224	0.492	0
ACIAD0526		putative protein controls HAP (6-N-hydroxylaminopurine) mutagenesis (Ham1)		227	0.563	362	0.984	225	0.490	0
ACIAD0007		putative transport protein (ABC superfamily, atp_bind)		209	0.580	995	0.969	226	0.490	0
ACIAD1221	trmU	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase	2.1.1.61	232	0.561	362	0.984	227	0.489	0
ACIAD3325	rpoZ	RNA polymerase, omega subunit	2.7.7.6	231	0.561	362	0.984	228	0.489	0
ACIAD0501	rpmG	50S ribosomal protein L33		257	0.542	1	1.000	229	0.488	0
ACIAD0183	atpF	membrane-bound ATP synthase, F0 sector, subunit b	7.1.2.2	256	0.542	1	1.000	230	0.488	0
ACIAD0271	ftsW	cell division protein, stabililzes FtsZ ring		236	0.559	362	0.984	231	0.487	0
ACIAD0022	ileS	isoleucyl-tRNA synthetase	6.1.1.5	258	0.542	1	1.000	232	0.487	0
ACIAD2408	folB	dihydroneopterin aldolase	4.1.2.25	259	0.540	1	1.000	233	0.486	0
ACIAD1132		conserved hypothetical protein		237	0.559	362	0.984	234	0.486	0
ACIAD0901	dut	deoxyuridine 5'-triphosphate nucleotidohydrolase	3.6.1.23	248	0.552	284	0.989	235	0.486	0
ACIAD3512	ftsA	cell division protein		261	0.540	1	1.000	236	0.486	0
ACIAD1996	ispF	2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	4.6.1.12	223	0.565	567	0.977	237	0.485	0
ACIAD2035	tkt	transketolase	2.2.1.1	242	0.556	362	0.984	238	0.484	0
ACIAD3228		putative GTPase, involved in coordination of cell cycle (EngB)		262	0.538	1	1.000	239	0.484	0
ACIAD3059		conserved hypothetical protein		191	0.598	1688	0.947	240	0.483	0
ACIAD2861	carB	carbamoyl-phosphate synthase, large subunit	6.3.5.5	243	0.555	362	0.984	241	0.483	0
ACIAD2206	efp	elongation factor P		263	0.536	1	1.000	242	0.483	0
ACIAD2001	eno	enolase	4.2.1.11	244	0.554	362	0.984	243	0.483	0
ACIAD1945	murB	UDP-N-acetylenolpyruvoylglucosamine reductase, FAD-binding	1.3.1.98	264	0.535	1	1.000	244	0.482	0
ACIAD3680	trmE	GTPase involved in tRNA modification and in thiophene and furan oxidation		228	0.562	732	0.976	245	0.482	0
ACIAD2871	trpS	tryptophanyl-tRNA synthetase	6.1.1.2	265	0.534	1	1.000	246	0.481	0
ACIAD2860	carA	carbamoyl-phosphate synthase, small chain	6.3.5.5	238	0.558	732	0.976	247	0.479	0
ACIAD2375	mutL	enzyme in methyl-directed mismatch repair, stimulates binding of Vsr and MutS to heteroduplex DNA		270	0.532	1	1.000	248	0.479	0
ACIAD0247	ribD	bifunctional protein [Includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase (Riboflavin-specific deaminase); 5-amino-6-(5- phosphoribosylamino)uracil reductase (HTP reductase) ]	3.5.4.26, 1.1.1.193	222	0.566	995	0.969	249	0.478	0
ACIAD3060	panC	pantoate--beta-alanine ligase (Pantothenate synthetase) (Pantoate activating enzyme)	6.3.2.1	199	0.587	1612	0.950	250	0.476	0
ACIAD2417	hemK	methyl transferase	2.1.1.-	254	0.547	362	0.984	251	0.476	0
ACIAD0370	rbfA	ribosome-binding factor A		253	0.547	362	0.984	252	0.476	0
ACIAD0242		magnesium chelatase, competence related protein (ComM)		239	0.558	846	0.974	253	0.476	0
ACIAD3032	proC	pyrroline-5-carboxylate reductase	1.5.1.2	198	0.589	1688	0.947	254	0.475	0
ACIAD2440	mnmG	tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG		271	0.528	1	1.000	255	0.475	0
ACIAD2268	tsf	protein chain elongation factor EF-Ts		245	0.554	732	0.976	256	0.475	0
ACIAD0589		putative SecYEG protein translocase auxillary subunit (YajC)		260	0.540	284	0.989	257	0.475	0
ACIAD0514	folA	dihydrofolate reductase	1.5.1.3	273	0.527	1	1.000	258	0.474	0
ACIAD3035	accA	acetyl-coenzyme A carboxylase carboxyl transferase (alpha subunit)	6.4.1.2	276	0.526	1	1.000	259	0.473	0
ACIAD0839	ffh	4.5S-RNP protein, GTP binding export factor, part of signal recognition particle with 4.5 RNA		277	0.525	1	1.000	260	0.473	0
ACIAD0266	xerD	site-specific tyrosine recombinase		247	0.553	846	0.974	261	0.472	0
ACIAD2950	valS	valyl-tRNA synthetase	6.1.1.9	251	0.548	567	0.977	262	0.471	0
ACIAD0283	argH	argininosuccinate lyase (Arginosuccinase) (ASAL)	4.3.2.1	278	0.523	1	1.000	263	0.471	0
ACIAD3511	ftsZ	cell division protein,tubulin-like GTP-binding protein and GTPase, forms circumferential ring in cell division and participates in the septum formation		268	0.533	284	0.989	264	0.469	0
ACIAD0881	rpsL	30S ribosomal protein S12		281	0.519	1	1.000	265	0.467	0
ACIAD0502	rpmB	50S ribosomal protein L28		286	0.516	1	1.000	266	0.465	0
ACIAD0182	atpE	membrane-bound ATP synthase, F0 sector, subunit c	7.1.2.2	285	0.516	1	1.000	267	0.465	0
ACIAD3576	glmS	glucosamine--fructose-6-phosphate aminotransferase	2.6.1.16	284	0.517	1	1.000	268	0.465	0
ACIAD3684	rpmH	50S ribosomal protein L34		283	0.517	1	1.000	269	0.465	0
ACIAD2474	hemE	uroporphyrinogen decarboxylase	4.1.1.37	267	0.533	362	0.984	270	0.464	0
ACIAD1255	epd	D-erythrose 4-phosphate dehydrogenase	1.2.1.72	287	0.514	1	1.000	271	0.462	0
ACIAD2908	rplY	50S ribosomal protein L25		279	0.523	284	0.989	272	0.460	0
ACIAD0260	gacA	response regulator (Global antibiotic and cyanide control protein, LuxR/UhpA family)		226	0.563	1439	0.953	273	0.460	0
ACIAD2612	purL	phosphoribosylformylglycinamidine synthase (FGAM synthase) (FGAMS) (Formylglycinamide ribotide amidotransferase) (FGARAT) (Formylglycinamide ribotide synthetase)	6.3.5.3	343	0.459	1	1.000	274	0.459	7
ACIAD3064		putative DNA uptake protein and/or related DNA-binding protein		274	0.526	362	0.984	275	0.458	0
ACIAD0861		putative ribosomal large subunit pseudouridine synthase B (Pseudouridylate synthase) (Uracil hydrolyase)	4.2.1.70	290	0.508	1	1.000	276	0.457	0
ACIAD3571	ribH	6,7-dimethyl-8-ribityllumazine synthase (Lumazine synthase)(riboflavin synthase beta chain)	2.5.1.9	280	0.520	284	0.989	277	0.457	0
ACIAD3009	ksgA	S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase, kasugamycin resistance	2.1.1.-	291	0.507	1	1.000	278	0.456	0
ACIAD2463	trpC	indole-3-glycerol phosphate synthase (IGPS)	4.1.1.48	282	0.518	284	0.989	279	0.456	0
ACIAD1386	hslR	heat shock protein 15		195	0.589	2157	0.927	280	0.456	0
ACIAD0547	proA	gamma-glutamyl phosphate reductase (GPR) (Glutamate-5- semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase)	1.2.1.41	269	0.533	846	0.974	281	0.455	0
ACIAD3563	dtd	D-tyrosyl tRNA(tyr) deacylase	3.1.-.-	234	0.560	1612	0.950	282	0.455	0
ACIAD2263	rodA	rod shape-determining protein		294	0.504	1	1.000	283	0.454	0
ACIAD0707	mutM	formamidopyrimidine-DNA glycosylase	3.2.2.23	272	0.527	732	0.976	284	0.452	0
ACIAD3206	rpsN	30S ribosomal protein S14		297	0.502	1	1.000	285	0.452	0
ACIAD0050	rph	ribonuclease PH (RNase PH), tRNA nucleotidyltransferase	2.7.7.56	240	0.558	1688	0.947	286	0.451	0
ACIAD0211	def	peptide deformylase 1 (N-formylmethionylaminoacyl-tRNA deformylase, binds Zn(II))	3.5.1.88	299	0.500	1	1.000	287	0.450	0
ACIAD3126	radC	DNA repair protein, associated with replication forks		275	0.526	846	0.974	288	0.449	0
ACIAD2470	folE	GTP cyclohydrolase I	3.5.4.16	292	0.507	284	0.989	289	0.446	0
ACIAD1500	mutS	methyl-directed mismatch repair, recognize exocyclic adducts of guanosine		306	0.494	1	1.000	290	0.445	0
ACIAD1376	dxr	1-deoxy-d-xylulose 5-phosphate reductoisomerase	1.1.1.267	289	0.510	362	0.984	291	0.444	0
ACIAD0643	accD	acetylCoA carboxylase, beta subunit	6.4.1.2	307	0.494	1	1.000	292	0.444	0
ACIAD3353	aroB	3-dehydroquinate synthase	4.2.3.4	252	0.547	1688	0.947	293	0.442	0
ACIAD0692	ogt	methylated-DNA--protein-cysteine methyltransferase (6-O- methylguanine-DNA methyltransferase) (O-6-methylguanine-DNA- alkyltransferase)	2.1.1.63	288	0.513	567	0.977	294	0.441	0
ACIAD1737	accB	biotin carboxyl carrier protein of acetyl-CoA carboxylase (BCCP)		301	0.500	284	0.989	295	0.440	0
ACIAD2876	sucA	2-oxoglutarate decarboxylase E1 component of the 2-oxoglutarate dehydrogenase complex	1.2.4.2	312	0.488	1	1.000	296	0.439	0
ACIAD3311	trmD	tRNA (guanine-1-)-methyltransferase.	2.1.1.-	295	0.504	362	0.984	297	0.439	0
ACIAD3638	sun	16S rRNA m5C967 SAM-dependent methyltransferase		216	0.569	2226	0.926	298	0.439	0
ACIAD0135		putative transcriptional repressor (GalR/LacI family)		255	0.543	1688	0.947	299	0.438	0
ACIAD3570	ribB/A	bifunctional protein [Includes: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II]	3.5.4.25	313	0.485	1	1.000	300	0.437	0
ACIAD0879	fabB	beta-ketoacyl-ACP synthase I (3-oxoacyl-[acyl-carrier-protein] synthase I)	2.3.1.41	315	0.485	1	1.000	301	0.436	0
ACIAD3682		putative membrane protein insertion efficiency factor		314	0.485	1	1.000	302	0.436	0
ACIAD2599	dapD	2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase	2.3.1.117	370	0.445	284	0.989	303	0.435	6
ACIAD3159	phoL	phosphate starvation-inducible protein (PhoH-like)		230	0.561	2157	0.927	304	0.434	0
ACIAD1481	cysS	cysteinyl-tRNA synthetase	6.1.1.16	317	0.482	1	1.000	305	0.434	0
ACIAD3652	grpE	Hsp 24 nucleotide exchange factor		318	0.482	1	1.000	306	0.434	0
ACIAD0561	ispG	1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase		305	0.495	362	0.984	307	0.431	0
ACIAD0384	ubiE	S-adenosylmethionine : 2-DMK methyltransferase and 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase	2.1.1.-	303	0.496	362	0.984	308	0.431	0
ACIAD2443	prmA	methylation of 50S ribosomal subunit protein L11 (ribosomal protein L11 methyltransferase)	2.1.1.-	241	0.557	2226	0.926	309	0.430	0
ACIAD3217	rplW	50S ribosomal protein L23		308	0.493	362	0.984	310	0.429	0
ACIAD0722	nrdB	ribonucleoside-diphosphate reductase, beta subunit	1.17.4.1	321	0.475	1	1.000	311	0.428	0
ACIAD2660	lysA	diaminopimelate decarboxylase	4.1.1.20	412	0.427	1	1.000	312	0.427	7
ACIAD0802		putative bicyclomycin/multidrug transport protein (MFS superfamily)		300	0.500	846	0.974	313	0.427	0
ACIAD1262	vfr	cyclic AMP receptor protein		309	0.493	567	0.977	314	0.423	0
ACIAD3380		putative transport protein (ABC superfamily, atp_bind)		298	0.500	1079	0.967	315	0.421	0
ACIAD0588	secD	preprotein translocase, IISP family, part of the channel		330	0.466	1	1.000	316	0.420	0
ACIAD2422		conserved hypothetical protein		310	0.489	846	0.974	317	0.418	0
ACIAD0487	uup	transport protein Uup (ABC superfamily, atp_bind)		304	0.495	1079	0.967	318	0.417	0
ACIAD0429	norM	multidrug resistance protein (Na(+)/drug antiporter) (Multidrug- efflux transporter)		335	0.464	1	1.000	319	0.417	0
ACIAD3168		putative ribonuclease (Rbn)		311	0.489	967	0.973	320	0.416	0
ACIAD1738	aroQ	3-dehydroquinate dehydratase, type II	4.2.1.10	339	0.462	1	1.000	321	0.416	0
ACIAD0416	corC	magnesium and cobalt efflux protein		340	0.461	1	1.000	322	0.415	0
ACIAD0704	mscL	mechanosensitive channel		319	0.481	732	0.976	323	0.413	0
ACIAD0829		putative Maf-like protein		316	0.483	846	0.974	324	0.412	0
ACIAD3269	glyS	glycyl-tRNA synthetase, beta chain	6.1.1.14	320	0.481	732	0.976	325	0.412	0
ACIAD2844	glpD	glycerol-3-phosphate dehydrogenase	1.1.5.3	352	0.454	1	1.000	326	0.409	0
ACIAD2028	aroC	chorismate synthase	4.2.3.5	302	0.496	1255	0.957	327	0.409	0
ACIAD3587	purC	phosphoribosylaminoimidazole-succinocarboxamide synthase	6.3.2.6	353	0.454	1	1.000	328	0.409	0
ACIAD2367	soj	chromosome partitioning protein		327	0.469	362	0.984	329	0.408	0
ACIAD0658		putative sigma(54) modulation protein RpoX		293	0.504	1688	0.947	330	0.407	0
ACIAD0184	atpH	membrane-bound ATP synthase , F1 sector, delta-subunit	7.1.2.2	337	0.462	284	0.989	331	0.407	0
ACIAD2729	umuD	component of DNA polymerase V	3.4.21.-	296	0.503	1688	0.947	332	0.406	0
ACIAD0841		putative biotin--[acetyl-CoA-carboxylase] synthetase	6.3.4.15	361	0.451	1	1.000	333	0.406	0
ACIAD1252	lysC	aspartate kinase	2.7.2.4	333	0.466	362	0.984	334	0.405	0
ACIAD2927	lipB	lipoate-protein ligase B (Lipoate biosynthesis protein B)	6.-.-.-	373	0.443	1	1.000	335	0.399	0
ACIAD1375	cdsA	phosphatidate cytidylyltransferase	2.7.7.41	346	0.457	362	0.984	336	0.398	0
ACIAD0597	ilvE	branched-chain amino acid transferase	2.6.1.42	348	0.457	362	0.984	337	0.398	0
ACIAD1302	trmB	tRNA(guanine-7)methyltransferase	2.1.1.33	338	0.462	567	0.977	338	0.397	0
ACIAD0300	secE	preprotein translocase IISP family, membrane subunit		347	0.457	548	0.982	339	0.397	0
ACIAD3386		putative transcriptional accessory protein		266	0.534	2446	0.909	340	0.397	0
ACIAD1409	ppiD	peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase)	5.2.1.8	381	0.440	1	1.000	341	0.396	0
ACIAD1137	rnhA-dnaQ	bifunctional protein [Includes: ribonuclease HI; DNA polymerase III ,epsilon subunit, 3-5 exonucleolytic proofreading function]	3.1.26.4, 2.7.7.7	379	0.440	1	1.000	342	0.396	0
ACIAD3247	dxs	1-deoxyxylulose-5-phosphate synthase	2.2.1.7	354	0.453	362	0.984	343	0.395	0
ACIAD3498	prfB	peptide chain release factor 2		354	0.453	362	0.984	344	0.395	0
ACIAD1271	pyrX	aspartate carbamoyltransferase, non-catalytic chain (Dihydroorotase-like protein)		359	0.452	362	0.984	345	0.393	0
ACIAD2933		putative tRNA/rRNA methyltransferase	2.1.1.34	336	0.462	995	0.969	346	0.391	0
ACIAD1921	ppiB	peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase)	5.2.1.8	350	0.456	846	0.974	347	0.390	0
ACIAD3526	crc	catabolite repression control protein		396	0.433	1	1.000	348	0.390	0
ACIAD0890	trxB	thioredoxin reductase 1	1.8.1.9	356	0.452	567	0.977	349	0.389	0
ACIAD3658	purK	phosphoribosylaminoimidazole carboxylase ATPase subunit	4.1.1.21	365	0.447	362	0.984	350	0.389	0
ACIAD2875	sucB	dihydrolipoamide succinyltransferase, E2 component of 2-oxoglutarate dehydrogenase complex	2.3.1.61	324	0.470	1255	0.957	351	0.388	0
ACIAD2874	lpd	dihydrolipoamide dehydrogenase E3 subunit of 2-oxoglutarate dehydrogenase complex (Glycine oxidation system L-factor)	1.8.1.4, 1.2.1.25	402	0.431	1	1.000	352	0.388	0
ACIAD1105	adk	adenylate kinase	2.7.4.3	360	0.452	567	0.977	353	0.388	0
ACIAD0286	hemC	porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)	2.5.1.61	357	0.452	732	0.976	354	0.388	0
ACIAD3090	acnA	aconitate hydratase 1	4.2.1.3	323	0.471	1368	0.956	355	0.387	0
ACIAD3036	ppx	exopolyphosphatase (ExopolyPase) (Metaphosphatase)	3.6.1.11	325	0.469	1255	0.957	356	0.387	0
ACIAD2903	ispE	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)	2.7.1.148	384	0.438	284	0.989	357	0.386	0
ACIAD0657	rpoN	RNA polymerase sigma-54 factor		406	0.429	1	1.000	358	0.386	0
ACIAD0636	trpB	tryptophan synthase beta chain	4.2.1.20	407	0.429	1	1.000	359	0.386	0
ACIAD3611	tag	3-methyl-adenine DNA glycosylase I, constitutive	3.2.2.20	328	0.468	1255	0.957	360	0.386	0
ACIAD2996		putative hemolysin III (HLY-III)		363	0.448	567	0.977	361	0.385	0
ACIAD2968	ispA	geranyltranstransferase (farnesyldiphosphate synthase) (FPP synthase)	2.5.1.10	331	0.466	1255	0.957	362	0.384	0
ACIAD2886	gltA	citrate synthase	2.3.3.1	329	0.467	1368	0.956	363	0.384	0
ACIAD2045	bioB	biotin synthetase	2.8.1.6	362	0.450	846	0.974	364	0.384	0
ACIAD1876	gcvH	glycine cleavage complex protein H, carrier of aminomethyl moiety via covalently bound lipoyl cofactor		410	0.427	1	1.000	365	0.384	0
ACIAD1205	dps	stress response DNA-binding protein, starvation induced resistance to H2O2, ferritin-like		378	0.440	362	0.984	366	0.384	0
ACIAD3501	pdxH	pyridoxamine 5'-phosphate oxidase (acts also on pyridoxine phosphate and pyridoxine)	1.4.3.5	413	0.426	1	1.000	367	0.384	0
ACIAD2318		putative histidine triad family protein		415	0.425	1	1.000	368	0.383	0
ACIAD2091	cysE	serine acetyltransferase	2.3.1.30	368	0.447	732	0.976	369	0.383	0
ACIAD3061	panB	3-methyl-2-oxobutanoate hydroxymethyltransferase (Ketopantoate hydroxymethyltransferase)	2.1.2.11	383	0.439	362	0.984	370	0.382	0
ACIAD0099	galU	UTP-glucose-1-phosphate uridylyltransferase	2.7.7.9	322	0.475	1815	0.945	371	0.382	0
ACIAD3307	truB	tRNA pseudouridine 55 synthase	4.2.1.70	417	0.425	1	1.000	372	0.382	0
ACIAD2879	sdhB	succinate dehydrogenase, iron-sulfur subunit	1.-.-.-	422	0.423	1	1.000	373	0.381	0
ACIAD2659	dapF	diaminopimelate epimerase	5.1.1.7	560	0.381	1	1.000	374	0.381	7
ACIAD0360	pilD	type 4 prepilin-like proteins leader peptide processing enzyme (Protein secretion protein XCPA)[Includes: Leader peptidase (Prepilin peptidase); N-methyltransferase ]	3.4.23.43, 2.1.1.-	387	0.437	362	0.984	375	0.381	0
ACIAD3063	pcnB	poly(A) polymerase I (PAP)	2.7.7.19	388	0.436	362	0.984	376	0.379	0
ACIAD1308	thiG	thiamine biosynthesis protein, thiazole moiety		389	0.436	362	0.984	377	0.379	0
ACIAD0736	nuoG	NADH dehydrogenase I chain G	7.1.1.2	377	0.442	732	0.976	378	0.379	0
ACIAD1266	ilvD	dihydroxy-acid dehydratase	4.2.1.9	326	0.469	1815	0.945	379	0.377	0
ACIAD0064		putative virulence factor MviN family (multidrug/oligosaccharidyl-lipid/polysaccharide exporter superfamily)		397	0.433	362	0.984	380	0.377	0
ACIAD2003	pyrG	CTP synthase	6.3.4.2	431	0.418	1	1.000	381	0.376	0
ACIAD2002	kdsA	2-dehydro-3-deoxyphosphooctonate aldolase	2.5.1.55	430	0.418	1	1.000	382	0.376	0
ACIAD0010		putative chaperone involved in Fe-S cluster assembly and activation (HesB-like)		382	0.439	732	0.976	383	0.376	0
ACIAD1225	dacC	D-ala-D-ala-carboxypeptidase; penicillin-binding protein 5 (precursor)	3.4.16.4	351	0.456	1368	0.956	384	0.375	0
ACIAD1063	estR	esterase operon transcriptional regulator (LysR family)		334	0.464	1688	0.947	385	0.375	0
ACIAD0826	mreC	rod shape-determining protein		434	0.417	1	1.000	386	0.375	0
ACIAD0455	nudH	(di)nucleoside polyphosphate hydrolase (Ap5A pyrophosphatase)	3.6.1.-	385	0.438	732	0.976	387	0.375	0
ACIAD2371	ostA	organic solvent tolerance protein precursor or increased membrane permeability protein		437	0.416	1	1.000	388	0.374	0
ACIAD0869	rpmF	50S ribosomal protein L32		439	0.415	1	1.000	389	0.374	0
ACIAD0102	galE	UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase)	5.1.3.2	341	0.460	1612	0.950	390	0.374	0
ACIAD0515	thyA	thymidylate synthase (TS) (TSase)	2.1.1.45	442	0.414	1	1.000	391	0.373	0
ACIAD3122	secB	molecular chaperone in protein export		391	0.435	846	0.974	392	0.372	0
ACIAD2641	lolC	transport protein of outer membrane lipoproteins (ABC superfamily, membrane)		512	0.392	846	0.974	393	0.372	7
ACIAD1115	lon	DNA-binding ATP-dependent protease La	3.4.21.53	446	0.413	1	1.000	394	0.372	0
ACIAD2373	hfq	host factor I for bacteriophage Q beta replication, a growth-related protein		398	0.433	732	0.976	395	0.371	0
ACIAD0101	pgi	glucose-6-phosphate isomerase	5.3.1.9	400	0.432	567	0.977	396	0.371	0
ACIAD2623	pal	peptidoglycan-associated lipoprotein precursor		507	0.394	995	0.969	397	0.370	170
ACIAD0463	leuC	3-isopropylmalate dehydratase (isomerase), subunit with LeuD	4.2.1.33	341	0.460	1815	0.945	398	0.370	0
ACIAD3322	ispH	4-hydroxy-3-methylbut-2-enyl diphosphate reductase (also involved in penicillin tolerance and control of the stringent response. Seems to directly or indirectly interact with relA to maintain it in an inactive form during normal growth.)	1.17.7.4	416	0.425	362	0.984	399	0.370	0
ACIAD3361	mrcA	penicillin binding protein	2.4.1.129, 3.4.-.-	426	0.420	284	0.989	400	0.370	0
ACIAD3255	hemH	ferrochelatase	4.99.1.1	399	0.432	846	0.974	401	0.369	0
ACIAD2935	serS	seryl-tRNA synthetase ; also charges selenocystein tRNA with serine	6.1.1.11	423	0.423	362	0.984	402	0.368	0
ACIAD1646	putA	bifunctional protein [Includes: proline dehydrogenase (Proline oxidase); delta-1-pyrroline-5-carboxylate dehydrogenase (P5C dehydrogenase)]	1.5.5.2, 1.2.1.88	369	0.447	1368	0.956	403	0.368	0
ACIAD3374	czcD	cation efflux system protein		459	0.409	1	1.000	404	0.368	0
ACIAD3080	pntA-1	pyridine nucleotide transhydrogenase (proton pump), alpha subunit (part1)	1.6.1.2	349	0.457	1815	0.945	405	0.367	0
ACIAD1890	fumC	fumarase C (fumarate hydratase Class II)	4.2.1.2	466	0.407	1	1.000	406	0.367	0
ACIAD3268	glyQ	glycyl-tRNA synthetase, alpha chain	6.1.1.14	409	0.428	732	0.976	407	0.366	0
ACIAD0225	dinP	DNA polymerase IV, devoid of proofreading, damage-inducible protein P	2.7.7.7	358	0.452	1688	0.947	408	0.365	0
ACIAD3065		putative nucleoside triphosphate pyrophosphohydrolase (MazG)		421	0.423	567	0.977	409	0.364	0
ACIAD0830	cafA	ribonuclease G, endoribonuclease G (cytoplasmic axial filament protein )	3.1.4.-	444	0.414	284	0.989	410	0.364	0
ACIAD1323	purF	amidophosphoribosyltransferase	2.4.2.14	477	0.404	1	1.000	411	0.363	0
ACIAD1116	folN	5-formyltetrahydrofolate cyclo-ligase	6.3.3.2	479	0.404	1	1.000	412	0.363	0
ACIAD0744	upp	uracil phosphoribosyltransferase	2.4.2.9	364	0.448	1688	0.947	413	0.362	0
ACIAD3243	ttg2B	toluene tolerance efflux transporter (ABC superfamily, membrane)		418	0.424	967	0.973	414	0.361	0
ACIAD2647	serC	3-phosphoserine aminotransferase	2.6.1.52	629	0.360	1	1.000	415	0.360	7
ACIAD1378		putative outer membrane protein		427	0.420	732	0.976	416	0.360	0
ACIAD3389	envZ	sensory histidine kinase in two-component regulatory system with OmpR		443	0.414	362	0.984	417	0.360	0
ACIAD3528		conserved hypothetical protein; putative arsenate reductase and related		332	0.466	2157	0.927	418	0.360	0
ACIAD2298		putative zinc protease	3.4.24.-	496	0.398	1	1.000	419	0.359	0
ACIAD3244	ttg2A	toluene tolerance efflux transporter (ABC superfamily, atp_bind)		419	0.424	995	0.969	420	0.359	0
ACIAD3557	phoB	positive response regulator for the pho regulon, autophosphorylates and phosphorylates sensor PhoR		450	0.412	362	0.984	421	0.359	0
ACIAD3102	ilvC	acetohydroxy acid isomeroreductase and 2-dehydropantoate 2-reductase	1.1.1.86, 1.1.1.169	451	0.412	362	0.984	422	0.358	0
ACIAD2426	cyoB	cytochrome o ubiquinol oxidase subunit I	1.10.3.-	428	0.420	846	0.974	423	0.358	0
ACIAD0068	ptk	tyrosine-protein kinase, autophosphorylates	2.7.10.2	376	0.443	1688	0.947	424	0.358	0
ACIAD2380	rsuA	16S rRNA pseudouridylate 516 synthase	4.2.1.70	468	0.406	284	0.989	425	0.357	0
ACIAD1101	pbpA	penicillin-binding protein 2		501	0.396	1	1.000	426	0.357	0
ACIAD3245		putative ATP-dependent RNA helicase		433	0.417	732	0.976	427	0.357	0
ACIAD2553	folD	bifunctional protein [Includes: 5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolase]	1.5.1.5, 3.5.4.9	441	0.414	567	0.977	428	0.356	0
ACIAD2341	pyrF	orotidine-5'-phosphate decarboxylase (OMP decarboxylase) (OMPDCase) (OMPdecase)	4.1.1.23	432	0.418	846	0.974	429	0.356	0
ACIAD1901	modA	molybdate transport protein (ABC superfamily, peri_bind)		375	0.443	1815	0.945	430	0.356	0
ACIAD1331	rpsU	30S ribosomal protein S21		472	0.405	284	0.989	431	0.356	0
ACIAD2837	dgkA	diacylglycerol kinase	2.7.1.107	367	0.447	1986	0.939	432	0.355	0
ACIAD2352	ung	uracil-DNA glycosylase		504	0.394	1	1.000	433	0.355	0
ACIAD3532	dsbD	thiol:disulfide interchange protein precursor	1.8.1.8	448	0.413	567	0.977	434	0.355	0
ACIAD3121	grx	glutaredoxin		440	0.414	846	0.974	435	0.354	0
ACIAD2657	xerC	site-specific tyrosine recombinase		606	0.366	362	0.984	436	0.354	7
ACIAD2586		putative serine protease MucD precursor		652	0.354	1	1.000	437	0.354	6
ACIAD0407	hslO	heat shock protein Hsp33		345	0.459	2226	0.926	438	0.354	0
ACIAD0875	thiD	bifunctional protein [Includes: hydroxy-methylpyrimidine kinase (HMP kinase); hydroxy-phosphomethylpyrimidine kinase (HMP-P kinase)]	2.7.4.7	445	0.413	846	0.974	439	0.353	0
ACIAD3562	pncB	nicotinate phosphoribosyltransferase	6.3.4.21	510	0.393	1	1.000	440	0.353	0
ACIAD1736	accC	biotin carboxylase (A subunit of acetyl-CoA carboxylase)	6.3.4.14	518	0.391	1	1.000	441	0.352	0
ACIAD0275	aspP	adenosine diphosphate sugar pyrophosphatase (ADP-ribose pyrophosphatase)	3.6.1.13	473	0.405	362	0.984	442	0.352	0
ACIAD3254		putative metal-binding hydrolase		452	0.411	732	0.976	443	0.352	0
ACIAD2613	dgt	deoxyguanosinetriphosphate triphosphohydrolase (dGTPase) (dGTP triphosphohydrolase)	3.1.5.1	617	0.363	362	0.984	444	0.351	9
ACIAD2362	kdsB	3-deoxy-manno-octulosonate cytidylyltransferase	2.7.7.38	435	0.417	1079	0.967	445	0.351	0
ACIAD2287	maeB	NAD(P)-dependent malic enzyme ; bifunctional: NADP-dependent malic oxidoreductase (N-terminal); phosphotransacetylase (C-terminal)]	1.1.1.40, 2.3.1.8	521	0.390	1	1.000	446	0.351	0
ACIAD1925	fda	fructose-1,6-bisphosphate aldolase, class II	4.1.2.13	460	0.409	567	0.977	447	0.351	0
ACIAD1670		putative prolyl-tRNA synthetases		393	0.434	1688	0.947	448	0.351	0
ACIAD1321	pyrD	dihydroorotate oxydase	1.3.98.1, 1.3.5.2	520	0.390	1	1.000	449	0.351	0
ACIAD2898		putative competence protein (ComL)		464	0.408	732	0.976	450	0.350	0
ACIAD1642	uppP	undecaprenylpyrophosphate phosphatase	3.6.1.27	463	0.408	732	0.976	451	0.350	0
ACIAD0735	nuoF	NADH dehydrogenase I chain F	7.1.1.2	458	0.409	732	0.976	452	0.350	0
ACIAD0596	glnE	glutamine synthetase adenylyltransferase	2.7.7.42	395	0.434	1688	0.947	453	0.350	0
ACIAD0541	ack	acetate kinase (propionate kinase)	2.7.2.1	467	0.407	567	0.977	454	0.350	0
ACIAD0308	rpoC	DNA-directed RNA polymerase beta' chain (Transcriptase beta' chain) (RNA polymerase beta' subunit)	2.7.7.6	528	0.389	1	1.000	455	0.350	0
ACIAD3585	dapA	4-hydroxy-tetrahydrodipicolinate synthase	4.3.3.7	527	0.389	1	1.000	456	0.350	0
ACIAD2880	sdhA	succinate dehydrogenase, flavoprotein subunit	1.-.-.-	457	0.409	846	0.974	457	0.349	0
ACIAD2619	tolQ	tolerance to group A colicins, single-stranded DNA filamentous phage, required for OM integrity		471	0.405	2134	0.928	458	0.349	172
ACIAD2400	copA	Copper-exporting P-type ATPase A		489	0.400	362	0.984	459	0.349	0
ACIAD2102	hrpA	ATP-dependent helicase	3.6.1.15	401	0.431	1688	0.947	460	0.349	0
ACIAD1113	rlmH	Ribosomal RNA large subunit methyltransferase H	2.1.1.-	394	0.434	1815	0.945	461	0.349	0
ACIAD0863	scpA	chromosome condensation and partitioning factor		469	0.406	567	0.977	462	0.349	0
ACIAD2566	rarD	chloramphenicol-sensitive protein		462	0.408	2277	0.923	463	0.348	5
ACIAD2070	metI	D- and L-methionine transport protein (ABC superfamily, membrane)		474	0.405	567	0.977	464	0.348	0
ACIAD3669	hpt	hypoxanthine phosphoribosyltransferase	2.4.2.8	491	0.400	362	0.984	465	0.348	0
ACIAD2450		D- and L-methionine transport protein (ABC superfamily, atp_bind) (metN-like)		404	0.430	1688	0.947	466	0.347	0
ACIAD1322		putative membrane protein required for colicin V production (CvpA)		498	0.398	362	0.984	467	0.347	0
ACIAD3619	dapB	4-hydroxy-tetrahydrodipicolinate reductase	1.17.1.8	475	0.405	732	0.976	468	0.347	0
ACIAD2265		putative rare lipoprotein A family (RlpA-like)		481	0.403	567	0.977	469	0.346	0
ACIAD3031		conserved hypothetical protein; putative integral membrane resistance protein		486	0.402	567	0.977	470	0.345	0
ACIAD2655	etfB	electron transfer flavoprotein beta-subunit		555	0.382	1612	0.950	471	0.345	7
ACIAD2372	surA	peptidyl-prolyl cis-trans isomerase	5.2.1.8	480	0.403	732	0.976	472	0.345	0
ACIAD0752		putative oxidoreductase with FAD/NAD(P)-binding domain		405	0.429	1815	0.945	473	0.345	0
ACIAD0726	bfmR	response regulator in two-component regulatory system (bfmR/bfmS)		366	0.447	2226	0.926	474	0.345	0
ACIAD0415	lnt	apolipoprotein N-acyltransferase, copper homeostasis protein	2.3.1.-	549	0.383	1	1.000	475	0.345	0
ACIAD0044	ubiG	3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase	2.1.1.64	487	0.402	567	0.977	476	0.345	0
ACIAD3306		conserved hypothetical protein; putative membrane protein		516	0.391	284	0.989	477	0.345	0
ACIAD0466	leuD	3-isopropylmalate isomerase (dehydratase), subunit with LeuC	4.2.1.33	556	0.382	1	1.000	478	0.344	0
ACIAD3242	ttg2C	toluene tolerance efflux transporter (ABC superfamily, peri-bind)		482	0.403	846	0.974	479	0.344	0
ACIAD1999	ispD	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	2.7.7.60	483	0.402	846	0.974	480	0.343	0
ACIAD1384	recX	regulatory protein		371	0.444	2157	0.927	481	0.343	0
ACIAD1369	glnL	sensory kinase (soluble) in two-component regulatory system		470	0.406	1079	0.967	482	0.342	0
ACIAD0063	ampD	N-acetyl-anhydromuramyl-L-alanine amidase (Regulates ampC)		447	0.413	1222	0.960	483	0.342	0
ACIAD3211	rpmC	50S ribosomal protein L29		509	0.393	362	0.984	484	0.342	0
ACIAD0551	nagZ	beta-N-acetyl-D-glucosaminidase	3.2.1.52	380	0.440	2134	0.928	485	0.341	0
ACIAD2288	cca	Multifunctional protein [Includes: CCA-adding enzyme ; 2'-nucleotidase ; 2',3'-cyclic phosphodiesterase ; Phosphatase]	2.7.7.72, 3.1.3.-, 3.1.4.-	568	0.378	1	1.000	486	0.340	0
ACIAD2283	metF	5,10-methylenetetrahydrofolate reductase	1.5.1.20	571	0.377	1	1.000	487	0.340	0
ACIAD1081		putative hemolysin-related protein		493	0.399	846	0.974	488	0.340	0
ACIAD0935		putative RNA polymerase sigma factor		344	0.459	2482	0.907	489	0.340	0
ACIAD1672	mtlD	mannitol-1-phosphate 5-dehydrogenase	1.1.1.17	476	0.404	1190	0.966	490	0.339	0
ACIAD2973	kdpE	regulator of kdp operon (transcriptional effector)		386	0.438	2157	0.927	491	0.338	0
ACIAD0724	nrdA	ribonucleoside diphosphate reductase, alpha subunit	1.17.4.1	574	0.376	1	1.000	492	0.338	0
ACIAD0444		putative transcriptional regulator		455	0.410	1255	0.957	493	0.338	0
ACIAD2644		conserved hypothetical protein		657	0.353	567	0.977	494	0.337	7
ACIAD1903	moaCB	bifunctional protein [Includes: molybdenum cofactor biosynthesis protein C; molybdenum cofactor biosynthesis protein B]		449	0.412	1439	0.953	495	0.337	0
ACIAD2620	tolR	tolerance to group A colicins, single-stranded DNA filamentous phage, required for OM integrity		583	0.372	1612	0.950	496	0.336	155
ACIAD0930	glpK	glycerol kinase	2.7.1.30	580	0.373	1	1.000	497	0.336	0
ACIAD0284	algZ	alginate biosynthesis protein		390	0.435	2226	0.926	498	0.336	0
ACIAD3095	prfC	peptide chain release factor 3		392	0.435	2226	0.926	499	0.335	0
ACIAD3399		putative peptide synthetase		456	0.409	1439	0.953	500	0.335	0
ACIAD2363	lpxK	tetraacyldisaccharide 4'-kinase (Lipid A 4'-kinase)	2.7.1.130	523	0.389	732	0.976	501	0.334	0

ACIAD2615

ruvB

holliday junction helicase, subunit B

1

1.000

1

1.000

2

1.000

825

ACIAD0891

putative cell division protein, required for chromosome partitioning (FstK)

2

0.853

1

1.000

3

0.768

0

ACIAD0644

folC

bifunctional protein [Includes: folylpolyglutamate synthase (FPGS); dihydrofolate synthase ].

6.3.2.17, 6.3.2.12

4

0.842

1

1.000

4

0.758

0

ACIAD2664

radA

DNA repair protein

16

0.786

995

0.969

5

0.739

7

ACIAD3041

pheT

phenylalanyl-tRNA synthetase, beta subunit

6.1.1.20

3

0.850

732

0.976

6

0.729

0

ACIAD0359

coaE

dephosphocoenzyme A kinase

2.7.1.24

7

0.806

1

1.000

7

0.726

0

ACIAD3202

rpsE

30S ribosomal protein S5

8

0.805

1

1.000

8

0.724

0

ACIAD3042

pheS

phenylalanyl-tRNA synthetase, alpha-subunit

6.1.1.20

13

0.789

1

1.000

9

0.710

0

ACIAD3503

guaB

IMP dehydrogenase

1.1.1.205

14

0.787

1

1.000

10

0.709

0

ACIAD1372

pyrH

uridylate kinase

2.7.4.-

17

0.784

1

1.000

11

0.706

0

ACIAD1253

alaS

alanyl-tRNA synthetase

6.1.1.7

5

0.824

732

0.976

12

0.706

0

ACIAD2312

recR

recombination protein, gap repair

10

0.802

362

0.984

13

0.698

0

ACIAD1373

frr

ribosome releasing factor

6

0.810

567

0.977

14

0.695

0

ACIAD2561

putative GTP-binding protein (Obg)

42

0.729

732

0.976

15

0.694

6

ACIAD2838

groEL

chaperone Hsp60, peptide-dependent ATPase, heat shock protein

19

0.768

1

1.000

16

0.692

0

ACIAD1385

recA

DNA strand exchange and recombination protein with protease and nuclease activity.

21

0.768

1

1.000

17

0.692

0

ACIAD2580

era

GTP-binding protein,16S rRNA-binding,ribosome-associated GTPase

92

0.691

1

1.000

18

0.691

6

ACIAD2269

rpsB

30S ribosomal protein S2

9

0.804

567

0.977

19

0.691

0

ACIAD3213

rpsC

30S ribosomal protein S3

12

0.792

362

0.984

20

0.689

0

ACIAD2557

dusB

tRNA-dihydrouridine synthase B

1.-.-.-

59

0.716

567

0.977

21

0.683

5

ACIAD0368

nusA

transcription termination/antitermination, L factor (N utilization substance protein A)

27

0.757

1

1.000

22

0.681

0

ACIAD3076

conserved hypothetical protein

29

0.753

1

1.000

23

0.678

0

ACIAD2569

uvrB

excinuclease ABC subunit B (ATP-dependent DNA excision repair enzyme UvrAC)

76

0.700

362

0.984

24

0.677

6

ACIAD3365

murE

UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase

6.3.2.13

30

0.752

1

1.000

25

0.677

0

ACIAD0354

recN

DNA repair protein RecN

18

0.776

362

0.984

26

0.676

0

ACIAD3637

fmt

methionyl-tRNA formyltransferase

2.1.2.9

15

0.787

567

0.977

27

0.676

0

ACIAD2584

lepA

GTP-binding protein

68

0.707

732

0.976

28

0.673

6

ACIAD0565

putative GTP-binding protein EngA

32

0.746

1

1.000

29

0.671

0

ACIAD3046

rplT

50S ribosomal protein L20, also posttranslational autoregulator

22

0.767

362

0.984

30

0.668

0

ACIAD1265

clpB

ATP-dependent protease, Hsp 100, part of multi-chaperone system with DnaK, DnaJ, and GrpE

25

0.759

284

0.989

31

0.668

0

ACIAD0913

YggS

Pyridoxal phosphate homeostasis protein

28

0.755

284

0.989

32

0.665

0

ACIAD2374

miaA

delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase

2.5.1.75

36

0.737

1

1.000

33

0.664

0

ACIAD1395

mfd

transcription-repair coupling protein

23

0.763

362

0.984

34

0.664

0

ACIAD2432

rplI

50S ribosomal protein L9

38

0.735

1

1.000

35

0.661

0

ACIAD2894

smpB

ssrA-binding protein (Small protein B)

20

0.768

567

0.977

36

0.660

0

ACIAD0884

fusA

protein chain elongation factor EF-G, GTP-binding

39

0.734

1

1.000

37

0.660

0

ACIAD3596

putative ATPase

11

0.799

1255

0.957

38

0.659

0

ACIAD0301

nusG

transcription antitermination protein

31

0.747

284

0.989

39

0.658

0

ACIAD2635

purN

phosphoribosylglycinamide formyltransferase 1

2.1.2.2

128

0.655

1

1.000

40

0.655

7

ACIAD3517

murG

UDP-N-acetylglucosamine:N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase

2.4.1.227

44

0.728

1

1.000

41

0.655

0

ACIAD3212

rplP

50S ribosomal protein L16

46

0.727

1

1.000

42

0.654

0

ACIAD2893

coaD

phosphopantetheine adenylyltransferase

2.7.7.3

47

0.726

1

1.000

43

0.653

0

ACIAD0703

typA

GTP-binding elongation factor family protein

24

0.759

732

0.976

44

0.651

0

ACIAD3371

gltX

glutamyl-tRNA synthetase

6.1.1.17, 6.1.1.24

51

0.722

1

1.000

45

0.650

0

ACIAD0304

rplA

50S ribosomal protein L1

26

0.757

732

0.976

46

0.649

0

ACIAD3204

rplF

50S ribosomal protein L6

54

0.719

1

1.000

47

0.647

0

ACIAD3366

ftsI

septum formation, penicillin binding protein 3, peptidoglycan synthetase

2.4.1.129

56

0.717

1

1.000

48

0.646

0

ACIAD3068

relA

GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp synthetase I) ((p)ppGpp synthetase)

2.7.6.5

35

0.740

362

0.984

49

0.645

0

ACIAD0685

rpe

D-ribulose-5-phosphate 3-epimerase

5.1.3.1

57

0.717

1

1.000

50

0.645

0

ACIAD2101

putative 3-oxoacyl-[acyl-carrier-protein] synthase III

2.3.1.41

60

0.715

1

1.000

51

0.644

0

ACIAD2909

pth

peptidyl-tRNA hydrolase

3.1.1.29

41

0.730

284

0.989

52

0.643

0

ACIAD2583

lepB

leader peptidase (signal peptidase I) , serine protease

3.4.21.89

120

0.664

362

0.984

53

0.643

6

ACIAD2938

rpmA

50S ribosomal protein L27

62

0.713

1

1.000

54

0.641

0

ACIAD0660

murA

UDP-N-acetylglucosamine 1-carboxyvinyltransferase (Enoylpyruvate transferase) (UDP-N-acetylglucosamine enolpyruvyl transferase) (EPT)

2.5.1.7

65

0.710

1

1.000

55

0.639

0

ACIAD0432

putative heme chaperone HemW like

33

0.742

567

0.977

56

0.638

0

ACIAD0001

dnaA

Chromosomal replication initiator protein dnaA

34

0.742

567

0.977

57

0.638

0

ACIAD2853

ftsH

cell division protein

3.4.24.-

52

0.722

284

0.989

58

0.635

0

ACIAD0472

infA

protein chain initiation factor IF-1

71

0.705

1

1.000

59

0.635

0

ACIAD3313

rpsP

30S ribosomal protein S16

72

0.704

1

1.000

60

0.633

0

ACIAD0848

ligA

DNA ligase

6.5.1.2

37

0.736

732

0.976

61

0.631

0

ACIAD0188

atpC

membrane-bound ATP synthase , F1 sector, epsilon-subunit

7.1.2.2

48

0.725

362

0.984

62

0.631

0

ACIAD3055

thrS

threonyl-tRNA synthetase

6.1.1.3

75

0.700

1

1.000

63

0.630

0

ACIAD0185

atpA

membrane-bound ATP synthase , F1 sector, alpha-subunit

7.1.2.2

78

0.699

1

1.000

64

0.629

0

ACIAD3235

recG

ATP-dependent DNA helicase

80

0.698

1

1.000

65

0.628

0

ACIAD0883

rpsG

30S ribosomal protein S7

53

0.720

362

0.984

66

0.627

0

ACIAD3199

secY

secretion protein

63

0.712

284

0.989

67

0.627

0

ACIAD3220

rpsJ

30S ribosomal protein S10

43

0.729

567

0.977

68

0.626

0

ACIAD1389

rpsT

30S ribosomal protein S20

84

0.694

1

1.000

69

0.625

0

ACIAD1130

putative methyltransferase

83

0.694

1

1.000

70

0.625

0

ACIAD0557

rlmN

23S rRNA adenosine methyltransferase

2.1.1.-

40

0.732

846

0.974

71

0.625

0

ACIAD0023

ribF

bifunctional protein [Includes: riboflavin kinase (Flavokinase); FMN adenylyltransferase (FAD pyrophosphorylase) (FAD synthetase)]

2.7.1.26, 2.7.7.2

85

0.694

1

1.000

72

0.625

0

ACIAD3502

glmM

phosphoglucosamine mutase

5.4.2.10

55

0.718

362

0.984

73

0.625

0

ACIAD2418

prfA

peptide chain release factor 1

66

0.709

284

0.989

74

0.624

0

ACIAD0021

lspA

prolipoprotein signal peptidase (Signal peptidase II.)

3.4.23.36

58

0.716

362

0.984

75

0.624

0

ACIAD3209

rplN

50S ribosomal protein L14

88

0.692

1

1.000

76

0.623

0

ACIAD3218

rplD

50S ribosomal protein L4, regulates expression of S10 operon

89

0.692

1

1.000

77

0.623

0

ACIAD3516

murC

UDP-N-acetylmuramate--alanine ligase

6.3.2.8

91

0.692

1

1.000

78

0.622

0

ACIAD2939

rplU

50S ribosomal protein L21

49

0.725

732

0.976

79

0.621

0

ACIAD0900

rep

ATP-dependent DNA helicase

3.6.1.-

93

0.690

1

1.000

80

0.621

0

ACIAD0533

tig

trigger factor, molecular chaperone involved in septum formation

64

0.712

362

0.984

81

0.620

0

ACIAD3363

mraY

phospho-N-acetylmuramoyl-pentapeptide transferase

2.7.8.13

50

0.724

732

0.976

82

0.620

0

ACIAD0402

pnp

polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase)

2.7.7.8

95

0.687

1

1.000

83

0.618

0

ACIAD1100

putative methyltransferase

70

0.706

362

0.984

84

0.615

0

ACIAD3210

rpsQ

30S ribosomal protein S17

97

0.683

1

1.000

85

0.615

0

ACIAD2430

rpsF

30S ribosomal protein S6

101

0.681

1

1.000

86

0.613

0

ACIAD0871

fabG

3-oxoacyl-[acyl-carrier-protein] reductase

1.1.1.100

102

0.680

1

1.000

87

0.612

0

ACIAD1258

purA

adenylosuccinate synthetase

6.3.4.4

73

0.701

362

0.984

88

0.611

0

ACIAD3013

rpsI

30S ribosomal protein S9

74

0.701

362

0.984

89

0.610

0

ACIAD0270

murD

UDP-N-acetylmuramoylalanine-D-glutamate ligase

6.3.2.9

105

0.678

1

1.000

90

0.610

0

ACIAD3515

ddlB

D-alanine-D-alanine ligase B

6.3.2.4

87

0.693

284

0.989

91

0.610

0

ACIAD0357

putative tRNA/rRNA methyltransferase

2.1.1.-

107

0.676

1

1.000

92

0.609

0

ACIAD3654

dnaK

chaperone Hsp70 in DNA biosynthesis/cell division

106

0.677

1

1.000

93

0.609

0

ACIAD3037

trxA

thioredoxin

108

0.675

1

1.000

94

0.608

0

ACIAD3030

polA

DNA polymerase I, 3' --> 5' polymerase, 5' --> 3' and 3'--> 5' exonuclease

2.7.7.7

67

0.708

567

0.977

95

0.608

0

ACIAD2634

purM

phosphoribosylaminoimidazole synthetase

6.3.3.1

141

0.641

846

0.974

96

0.608

7

ACIAD3324

gmk

guanylate kinase

2.7.4.8

61

0.713

846

0.974

97

0.608

0

ACIAD0002

dnaN

DNA polymerase III, beta chain

2.7.7.7

69

0.706

567

0.977

98

0.607

0

ACIAD3364

murF

UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (UDP-MurNAc-pentapeptide synthetase) (D-alanyl-D- alanine-adding enzyme)

6.3.2.10

109

0.675

1

1.000

99

0.607

0

ACIAD0648

secA

preprotein translocase, secretion protein of IISP family

82

0.696

362

0.984

100

0.606

0

ACIAD2839

groES

chaperone Hsp10, affects cell division

113

0.673

1

1.000

101

0.605

0

ACIAD2089

dnaE

DNA polymerase III, alpha chain

2.7.7.7

115

0.670

1

1.000

102

0.603

0

ACIAD3193

rplQ

50S ribosomal protein L17

96

0.684

284

0.989

103

0.603

0

ACIAD2348

cmk

cytidylate kinase (cytidine monophosphate (CMP) kinase)

2.7.4.25

116

0.669

1

1.000

104

0.602

0

ACIAD0535

clpX

ATP-dependent Clp protease ATP-binding subunit

90

0.692

362

0.984

105

0.602

0

ACIAD3257

murI

glutamate racemase

5.1.1.3

117

0.667

1

1.000

106

0.601

0

ACIAD2037

metK

methionine adenosyltransferase

2.5.1.6

77

0.699

567

0.977

107

0.600

0

ACIAD0209

putative Rossmann-fold nucleotide-binding protein involved in DNA uptake (Smf)

79

0.698

567

0.977

108

0.600

0

ACIAD0609

aspS

aspartyl-tRNA synthetase

6.1.1.12, 6.1.1.23, 6.1.1.-

81

0.697

567

0.977

109

0.599

0

ACIAD2448

purD

phosphoribosylamine--glycine ligase (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase)

6.3.4.13

45

0.727

1368

0.956

110

0.598

0

ACIAD0493

topA

DNA topoisomerase type I, omega protein

5.6.2.1

118

0.665

1

1.000

111

0.598

0

ACIAD2589

conserved hypothetical protein; putative periplasmic solute-binding protein

169

0.616

362

0.984

112

0.596

6

ACIAD0306

rplL

50S ribosomal protein L7/L12

86

0.694

567

0.977

113

0.596

0

ACIAD2350

putative deaminase

122

0.661

1

1.000

114

0.595

0

ACIAD3194

rpoA

RNA polymerase, alpha subunit

2.7.7.6

122

0.661

1

1.000

115

0.595

0

ACIAD3201

rpmD

50S ribosomal protein L30

98

0.682

548

0.982

116

0.593

0

ACIAD3500

recJ

ssDNA exonuclease, 5' --> 3' specific , Mg dependent

3.1.-.-

94

0.690

732

0.976

117

0.592

0

ACIAD2433

dnaB

replicative DNA helicase;chromosome replication, chain elongation

125

0.655

1

1.000

118

0.590

0

ACIAD1377

putative membrane-associated Zn-dependent proteases 1

129

0.654

1

1.000

119

0.589

0

ACIAD2447

purH

bifunctional protein [Includes: phosphoribosylaminoimidazolecarboxamide formyltransferase (AICAR transformylase); IMP cyclohydrolase (Inosinicase) (IMP synthetase) (ATIC)]

2.1.2.3, 3.5.4.10

131

0.653

1

1.000

120

0.588

0

ACIAD1317

gpsA

glycerol-3-phosphate dehydrogenase, biosynthetic

1.1.1.94

110

0.675

362

0.984

121

0.588

0

ACIAD0479

asd

aspartate-semialdehyde dehydrogenase, NAD(P)-binding

1.2.1.11

134

0.652

1

1.000

122

0.587

0

ACIAD0004

gyrB

DNA gyrase, subunit B (type II topoisomerase)

5.6.2.2

133

0.652

1

1.000

123

0.587

0

ACIAD3012

rplM

50S ribosomal protein L13

100

0.682

567

0.977

124

0.586

0

ACIAD3203

rplR

50S ribosomal protein L18

112

0.673

362

0.984

125

0.586

0

ACIAD3207

rplE

50S ribosomal protein L5

111

0.673

362

0.984

126

0.586

0

ACIAD2581

rnc

ribonuclease III, ds RNA

3.1.26.3

185

0.604

362

0.984

127

0.584

6

ACIAD3197

rpsM

30S ribosomal protein S13

114

0.670

362

0.984

128

0.584

0

ACIAD2899

dnaG

DNA primase

2.7.7.-

124

0.660

284

0.989

129

0.581

0

ACIAD0534

clpP

ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp) (Caseinolytic protease) (Protease Ti) (Heat shock protein F21.5)

3.4.21.92

138

0.644

1

1.000

130

0.580

0

ACIAD1248

rnhB

RNAse HII

3.1.26.4

104

0.678

846

0.974

131

0.579

0

ACIAD3236

putative DNA transformation protein (ComF)

103

0.679

846

0.974

132

0.579

0

ACIAD0352

yqgF

holliday junction resolvase yqgF-like

3.1.-.-

119

0.664

362

0.984

133

0.578

0

ACIAD0180

atpB

membrane-bound ATP synthase, F0 sector, subunit a, important for FO assembly

7.1.2.2

121

0.662

362

0.984

134

0.577

0

ACIAD0677

putative glycoprotein endopeptidase metalloprotease

3.4.-.-

130

0.653

284

0.989

135

0.575

0

ACIAD0187

atpD

membrane-bound ATP synthase , F1 sector, beta-subunit

7.1.2.2

144

0.639

1

1.000

136

0.575

0

ACIAD3200

rplO

50S ribosomal protein L15

147

0.636

1

1.000

137

0.572

0

ACIAD2652

gyrA

DNA gyrase, subunit A, type II topoisomerase

5.6.2.2

214

0.571

1

1.000

138

0.571

7

ACIAD3054

infC

protein chain initiation factor IF-3

152

0.633

1

1.000

139

0.570

0

ACIAD3160

putative metalloprotease ybeY-like

3.4.24.-

132

0.653

362

0.984

140

0.568

0

ACIAD2862

greA

transcription elongation factor, cleaves 3' nucleotide of paused mRNA

154

0.631

1

1.000

141

0.568

0

ACIAD2633

putative permease (PerM family)

201

0.585

362

0.984

142

0.566

7

ACIAD1408

hupB

DNA-binding protein HU-beta

142

0.641

284

0.989

143

0.565

0

ACIAD3208

rplX

50S ribosomal protein L24

156

0.628

1

1.000

144

0.565

0

ACIAD3214

rplV

50S ribosomal protein L22

136

0.649

362

0.984

145

0.565

0

ACIAD1332

tsaD

tRNA N6-adenosine threonylcarbamoyltransferase

3.4.24.57

137

0.647

362

0.984

146

0.564

0

ACIAD2639

comA

competence factor involved in DNA uptake

206

0.582

362

0.984

147

0.563

5

ACIAD0870

fabD

malonyl-CoA-[acyl-carrier-protein] transacylase

2.3.1.39

143

0.640

284

0.989

148

0.563

0

ACIAD3215

rpsS

30S ribosomal protein S19

157

0.625

1

1.000

149

0.563

0

ACIAD3062

folK

2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase) (HPPK) (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase) (PPPK)

2.7.6.3

99

0.682

1368

0.956

150

0.561

0

ACIAD2368

gidB

glucose-inhibited division protein B (methyltransferase)

2.1.-.-

160

0.624

1

1.000

151

0.561

0

ACIAD3219

rplC

50S ribosomal protein L3

146

0.638

284

0.989

152

0.561

0

ACIAD2365

msbA

lipid transport protein, flippase (ABC superfamily, membrane (N-terminal), atp_bind (C-terminal))

150

0.635

284

0.989

153

0.559

0

ACIAD2313

putative nucleoid-associated protein (YbaB like)

127

0.655

846

0.974

154

0.559

0

ACIAD0342

pgsA

CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase)

2.7.8.5

126

0.655

846

0.974

155

0.559

0

ACIAD3216

rplB

50S ribosomal protein L2

139

0.642

362

0.984

156

0.559

0

ACIAD0186

atpG

membrane-bound ATP synthase , F1 sector, gamma-subunit

7.1.2.2

151

0.633

284

0.989

157

0.558

0

ACIAD2071

putative GTP-binding protein

135

0.650

732

0.976

158

0.557

0

ACIAD2431

rpsR

30S ribosomal protein S18

167

0.616

1

1.000

159

0.555

0

ACIAD3368

mraW

Ribosomal RNA small subunit methyltransferase H

2.1.1.-

155

0.631

284

0.989

160

0.555

0

ACIAD2897

rluD

ribosomal large subunit pseudouridine synthase D (Pseudouridylate synthase) (Uracil hydrolyase)

4.2.1.70

172

0.614

1

1.000

161

0.553

0

ACIAD3310

rplS

50S ribosomal protein L19

148

0.636

362

0.984

162

0.553

0

ACIAD3449

ssb

ssDNA-binding protein controls activity of RecBCD nuclease

140

0.642

732

0.976

163

0.550

0

ACIAD0369

infB

protein chain initiation factor IF-2

179

0.610

1

1.000

164

0.549

0

ACIAD0474

truA

tRNA-pseudouridine synthase I

4.2.1.70

180

0.608

1

1.000

165

0.547

0

ACIAD3038

rho

transcription termination factor

184

0.605

1

1.000

166

0.545

0

ACIAD3034

tilS

tRNA(Ile)-lysidine synthetase

166

0.617

284

0.989

167

0.543

0

ACIAD2052

putative transcriptional regulator (YebC like)

159

0.624

362

0.984

168

0.543

0

ACIAD0151

guaA

GMP synthetase (glutamine aminotransferase)

6.3.5.2, 6.3.5.2

186

0.603

1

1.000

169

0.543

0

ACIAD3681

oxaA

Inner membrane protein (IMP) integration factor; binds TM regions of nascent IMPs; required for Sec-independent IMP integration; associated with the Sec translocase

161

0.623

362

0.984

170

0.543

0

ACIAD3205

rpsH

30S ribosomal protein S8

170

0.616

284

0.989

171

0.542

0

ACIAD0013

tyrS

tyrosyl-tRNA synthetase

6.1.1.1

189

0.601

1

1.000

172

0.541

0

ACIAD0367

Putative ribosome maturation factor RimP

145

0.638

1079

0.967

173

0.537

0

ACIAD0246

nrdR

Transcriptional repressor nrdR

165

0.617

362

0.984

174

0.537

0

ACIAD0305

rplJ

50S ribosomal protein L10

171

0.616

362

0.984

175

0.536

0

ACIAD1927

pgk

phosphoglycerate kinase

2.7.2.3

173

0.614

362

0.984

176

0.535

0

ACIAD3354

aroK

shikimate-kinase

2.7.1.71

174

0.614

362

0.984

177

0.535

0

ACIAD2560

proB

gamma-glutamyl kinase

2.7.2.11

225

0.564

846

0.974

178

0.534

6

ACIAD1405

iscR

repressor of the iscRSUA operon, involved in assembly of Fe-S clusters

158

0.624

846

0.974

179

0.533

0

ACIAD0302

rplK

50S ribosomal protein L11

162

0.622

732

0.976

180

0.533

0

ACIAD3106

leuS

leucyl-tRNA synthetase

6.1.1.4

178

0.611

362

0.984

181

0.532

0

ACIAD2925

rpoD

sigma D (sigma 70) factor of RNA polymerase , major sigma factor during exponential growth

197

0.589

1

1.000

182

0.530

0

ACIAD0364

secG

preprotein translocase IISP family, auxillary membrane component

181

0.607

362

0.984

183

0.529

0

ACIAD3508

putative peptidase

182

0.606

362

0.984

184

0.528

0

ACIAD2255

glyA

serine hydroxymethyltransferase

2.1.2.1

164

0.618

846

0.974

185

0.527

0

ACIAD1404

iscS

cysteine desulfurase used in synthesis of Fe-S cluster (tRNA 4-thiouridine sulfurtransferase )

4.4.1.-

190

0.598

284

0.989

186

0.527

0

ACIAD0363

tpiA

triosephosphate isomerase

5.3.1.1

177

0.612

567

0.977

187

0.526

0

ACIAD3047

rpmI

50S ribosomal protein L35

203

0.583

1

1.000

188

0.525

0

ACIAD0249

ribC

riboflavin synthase alpha chain

2.5.1.9

204

0.583

1

1.000

189

0.525

0

ACIAD0003

recF

DNA replication, recombinaison and repair protein

187

0.603

362

0.984

190

0.525

0

ACIAD3125

dfp

bifunctional protein [Includes: 4'-phosphopantothenoylcysteine decarboxylase; phosphopantothenoylcysteine synthetase, FMN-binding]

4.1.1.36, 6.3.2.5

149

0.635

1368

0.956

191

0.523

0

ACIAD2852

folP

7,8-dihydropteroate synthase

2.5.1.15

205

0.582

1

1.000

192

0.523

0

ACIAD3455

uvrA

excinuclease ABC subunit A

188

0.602

548

0.982

193

0.523

0

ACIAD3069

rumA

23S rRNA (Uracil-5-)-methyltransferase(23S rRNA(M- 5-U1939)-methyltransferase)

2.1.1.-

176

0.613

995

0.969

194

0.519

0

ACIAD3005

hflX

GTP-binding protein

168

0.616

1079

0.967

195

0.519

0

ACIAD2907

prs

ribose-phosphate pyrophosphokinase (Phosphoribosyl pyrophosphate synthetase)

2.7.6.1

183

0.606

732

0.976

196

0.519

0

ACIAD2359

conserved hypothetical protein; putative deoxyribonuclease

217

0.569

1

1.000

197

0.512

0

ACIAD3558

phoR

two-component sensor

2.7.3.-

153

0.632

1688

0.947

198

0.511

0

ACIAD2347

rpsA

30S ribosomal protein S1

219

0.567

1

1.000

199

0.510

0

ACIAD0401

rpsO

30S ribosomal protein S15

221

0.567

1

1.000

200

0.510

0

ACIAD3572

nusB

transcription termination, L factor (N utilization substance protein B)

193

0.594

567

0.977

201

0.510

0

ACIAD3196

rpsK

30S ribosomal protein S11

224

0.564

1

1.000

202

0.508

0

ACIAD0409

priA

primosomal protein N' (= factor Y) directs replication fork assembly at D-loops, ATP-dependent.

196

0.589

567

0.977

203

0.506

0

ACIAD3621

dnaJ

heat shock protein (Hsp40), co-chaperone with DnaK

229

0.562

1

1.000

204

0.506

0

ACIAD3158

putative tRNA-i(6)A37 modification enzyme (MiaB)

233

0.561

1

1.000

205

0.505

0

ACIAD3312

rimM

16S rRNA processing protein

208

0.580

362

0.984

206

0.505

0

ACIAD3575

glmU

bifunctional protein [Includes: UDP-N-acetylglucosamine pyrophosphorylase (N-acetylglucosamine-1-phosphate uridyltransferase); Glucosamine-1-phosphate N-acetyltransferase ]

2.7.7.23, 2.3.1.57

175

0.614

1368

0.956

207

0.505

0

ACIAD3195

rpsD

30S ribosomal protein S4

235

0.560

1

1.000

208

0.504

0

ACIAD2041

ruvC

holliday junction nuclease

200

0.585

567

0.977

209

0.503

0

ACIAD0910

fur

negative regulator of ferric iron uptake

162

0.622

1688

0.947

210

0.503

0

ACIAD2376

putative ATPase with strong ADP affinity

210

0.577

362

0.984

211

0.502

0

ACIAD0591

queA

S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine biosynthesis protein )

5.-.-.-

215

0.570

284

0.989

212

0.502

0

ACIAD2366

spoOJ

chromosome partitioning protein

212

0.575

362

0.984

213

0.501

0

ACIAD0590

tgt

queuine tRNA-ribosyltransferase (tRNA-guanine transglycosylase) (Guanine insertion enzyme)

2.4.2.29

202

0.583

732

0.976

214

0.500

0

ACIAD0340

uvrC

excinuclease ABC subunit C; UvrC with UvrAB is a DNA excision repair enzyme

213

0.574

362

0.984

215

0.500

0

ACIAD0518

lgt

prolipoprotein diacylglyceryl transferase

2.4.99.-

220

0.567

284

0.989

216

0.499

0

ACIAD2896

conserved hypothetical protein

194

0.591

1079

0.967

217

0.498

0

ACIAD1381

fabZ

(3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase

4.2.1.-

246

0.554

1

1.000

218

0.498

0

ACIAD0872

acpP

acyl carrier protein (ACP)

249

0.551

1

1.000

219

0.496

0

ACIAD3606

mutY

A/G specific adenine glycosylase

3.2.2.-

250

0.551

1

1.000

220

0.496

0

ACIAD3659

purE

phosphoribosylaminoimidazole carboxylase, mutase subunit

4.1.1.21

207

0.581

846

0.974

221

0.496

0

ACIAD2284

putative ribosomal RNA small subunit methyltransferase E (rsmE)

2.1.1.-

211

0.577

567

0.977

222

0.495

0

ACIAD2234

mrcB

bifunctional protein [Includes penicillin-insensitive transglycosylase; penicillin-sensitive transpeptidase] (penicillin-binding protein 1B)

2.4.1.129, 3.4.-.-

218

0.568

362

0.984

223

0.495

0

ACIAD3599

putative transcriptional regulator; putative detoxification transcriptional regulator

192

0.596

1255

0.957

224

0.492

0

ACIAD0526

putative protein controls HAP (6-N-hydroxylaminopurine) mutagenesis (Ham1)

227

0.563

362

0.984

225

0.490

0

ACIAD0007

putative transport protein (ABC superfamily, atp_bind)

209

0.580

995

0.969

226

0.490

0

ACIAD1221

trmU

tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase

2.1.1.61

232

0.561

362

0.984

227

0.489

0

ACIAD3325

rpoZ

RNA polymerase, omega subunit

2.7.7.6

231

0.561

362

0.984

228

0.489

0

ACIAD0501

rpmG

50S ribosomal protein L33

257

0.542

1

1.000

229

0.488

0

ACIAD0183

atpF

membrane-bound ATP synthase, F0 sector, subunit b

7.1.2.2

256

0.542

1

1.000

230

0.488

0

ACIAD0271

ftsW

cell division protein, stabililzes FtsZ ring

236

0.559

362

0.984

231

0.487

0

ACIAD0022

ileS

isoleucyl-tRNA synthetase

6.1.1.5

258

0.542

1

1.000

232

0.487

0

ACIAD2408

folB

dihydroneopterin aldolase

4.1.2.25

259

0.540

1

1.000

233

0.486

0

ACIAD1132

conserved hypothetical protein

237

0.559

362

0.984

234

0.486

0

ACIAD0901

dut

deoxyuridine 5'-triphosphate nucleotidohydrolase

3.6.1.23

248

0.552

284

0.989

235

0.486

0

ACIAD3512

ftsA

cell division protein

261

0.540

1

1.000

236

0.486

0

ACIAD1996

ispF

2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

4.6.1.12

223

0.565

567

0.977

237

0.485

0

ACIAD2035

tkt

transketolase

2.2.1.1

242

0.556

362

0.984

238

0.484

0

ACIAD3228

putative GTPase, involved in coordination of cell cycle (EngB)

262

0.538

1

1.000

239

0.484

0

ACIAD3059

conserved hypothetical protein

191

0.598

1688

0.947

240

0.483

0

ACIAD2861

carB

carbamoyl-phosphate synthase, large subunit

6.3.5.5

243

0.555

362

0.984

241

0.483

0

ACIAD2206

efp

elongation factor P

263

0.536

1

1.000

242

0.483

0

ACIAD2001

eno

enolase

4.2.1.11

244

0.554

362

0.984

243

0.483

0

ACIAD1945

murB

UDP-N-acetylenolpyruvoylglucosamine reductase, FAD-binding

1.3.1.98

264

0.535

1

1.000

244

0.482

0

ACIAD3680

trmE

GTPase involved in tRNA modification and in thiophene and furan oxidation

228

0.562

732

0.976

245

0.482

0

ACIAD2871

trpS

tryptophanyl-tRNA synthetase

6.1.1.2

265

0.534

1

1.000

246

0.481

0

ACIAD2860

carA

carbamoyl-phosphate synthase, small chain

6.3.5.5

238

0.558

732

0.976

247

0.479

0

ACIAD2375

mutL

enzyme in methyl-directed mismatch repair, stimulates binding of Vsr and MutS to heteroduplex DNA

270

0.532

1

1.000

248

0.479

0

ACIAD0247

ribD

bifunctional protein [Includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase (Riboflavin-specific deaminase); 5-amino-6-(5- phosphoribosylamino)uracil reductase (HTP reductase) ]

3.5.4.26, 1.1.1.193

222

0.566

995

0.969

249

0.478

0

ACIAD3060

panC

pantoate--beta-alanine ligase (Pantothenate synthetase) (Pantoate activating enzyme)

6.3.2.1

199

0.587

1612

0.950

250

0.476

0

ACIAD2417

hemK

methyl transferase

2.1.1.-

254

0.547

362

0.984

251

0.476

0

ACIAD0370

rbfA

ribosome-binding factor A

253

0.547

362

0.984

252

0.476

0

ACIAD0242

magnesium chelatase, competence related protein (ComM)

239

0.558

846

0.974

253

0.476

0

ACIAD3032

proC

pyrroline-5-carboxylate reductase

1.5.1.2

198

0.589

1688

0.947

254

0.475

0

ACIAD2440

mnmG

tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG

271

0.528

1

1.000

255

0.475

0

ACIAD2268

tsf

protein chain elongation factor EF-Ts

245

0.554

732

0.976

256

0.475

0

ACIAD0589

putative SecYEG protein translocase auxillary subunit (YajC)

260

0.540

284

0.989

257

0.475

0

ACIAD0514

folA

dihydrofolate reductase

1.5.1.3

273

0.527

1

1.000

258

0.474

0

ACIAD3035

accA

acetyl-coenzyme A carboxylase carboxyl transferase (alpha subunit)

6.4.1.2

276

0.526

1

1.000

259

0.473

0

ACIAD0839

ffh

4.5S-RNP protein, GTP binding export factor, part of signal recognition particle with 4.5 RNA

277

0.525

1

1.000

260

0.473

0

ACIAD0266

xerD

site-specific tyrosine recombinase

247

0.553

846

0.974

261

0.472

0

ACIAD2950

valS

valyl-tRNA synthetase

6.1.1.9

251

0.548

567

0.977

262

0.471

0

ACIAD0283

argH

argininosuccinate lyase (Arginosuccinase) (ASAL)

4.3.2.1

278

0.523

1

1.000

263

0.471

0

ACIAD3511

ftsZ

cell division protein,tubulin-like GTP-binding protein and GTPase, forms circumferential ring in cell division and participates in the septum formation

268

0.533

284

0.989

264

0.469

0

ACIAD0881

rpsL

30S ribosomal protein S12

281

0.519

1

1.000

265

0.467

0

ACIAD0502

rpmB

50S ribosomal protein L28

286

0.516

1

1.000

266

0.465

0

ACIAD0182

atpE

membrane-bound ATP synthase, F0 sector, subunit c

7.1.2.2

285

0.516

1

1.000

267

0.465

0

ACIAD3576

glmS

glucosamine--fructose-6-phosphate aminotransferase

2.6.1.16

284

0.517

1

1.000

268

0.465

0

ACIAD3684

rpmH

50S ribosomal protein L34

283

0.517

1

1.000

269

0.465

0

ACIAD2474

hemE

uroporphyrinogen decarboxylase

4.1.1.37

267

0.533

362

0.984

270

0.464

0

ACIAD1255

epd

D-erythrose 4-phosphate dehydrogenase

1.2.1.72

287

0.514

1

1.000

271

0.462

0

ACIAD2908

rplY

50S ribosomal protein L25

279

0.523

284

0.989

272

0.460

0

ACIAD0260

gacA

response regulator (Global antibiotic and cyanide control protein, LuxR/UhpA family)

226

0.563

1439

0.953

273

0.460

0

ACIAD2612

purL

phosphoribosylformylglycinamidine synthase (FGAM synthase) (FGAMS) (Formylglycinamide ribotide amidotransferase) (FGARAT) (Formylglycinamide ribotide synthetase)

6.3.5.3

343

0.459

1

1.000

274

0.459

7

ACIAD3064

putative DNA uptake protein and/or related DNA-binding protein

274

0.526

362

0.984

275

0.458

0

ACIAD0861

putative ribosomal large subunit pseudouridine synthase B (Pseudouridylate synthase) (Uracil hydrolyase)

4.2.1.70

290

0.508

1

1.000

276

0.457

0

ACIAD3571

ribH

6,7-dimethyl-8-ribityllumazine synthase (Lumazine synthase)(riboflavin synthase beta chain)

2.5.1.9

280

0.520

284

0.989

277

0.457

0

ACIAD3009

ksgA

S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase, kasugamycin resistance

2.1.1.-

291

0.507

1

1.000

278

0.456

0

ACIAD2463

trpC

indole-3-glycerol phosphate synthase (IGPS)

4.1.1.48

282

0.518

284

0.989

279

0.456

0

ACIAD1386

hslR

heat shock protein 15

195

0.589

2157

0.927

280

0.456

0

ACIAD0547

proA

gamma-glutamyl phosphate reductase (GPR) (Glutamate-5- semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase)

1.2.1.41

269

0.533

846

0.974

281

0.455

0

ACIAD3563

dtd

D-tyrosyl tRNA(tyr) deacylase

3.1.-.-

234

0.560

1612

0.950

282

0.455

0

ACIAD2263

rodA

rod shape-determining protein

294

0.504

1

1.000

283

0.454

0

ACIAD0707

mutM

formamidopyrimidine-DNA glycosylase

3.2.2.23

272

0.527

732

0.976

284

0.452

0

ACIAD3206

rpsN

30S ribosomal protein S14

297

0.502

1

1.000

285

0.452

0

ACIAD0050

rph

ribonuclease PH (RNase PH), tRNA nucleotidyltransferase

2.7.7.56

240

0.558

1688

0.947

286

0.451

0

ACIAD0211

def

peptide deformylase 1 (N-formylmethionylaminoacyl-tRNA deformylase, binds Zn(II))

3.5.1.88

299

0.500

1

1.000

287

0.450

0

ACIAD3126

radC

DNA repair protein, associated with replication forks

275

0.526

846

0.974

288

0.449

0

ACIAD2470

folE

GTP cyclohydrolase I

3.5.4.16

292

0.507

284

0.989

289

0.446

0

ACIAD1500

mutS

methyl-directed mismatch repair, recognize exocyclic adducts of guanosine

306

0.494

1

1.000

290

0.445

0

ACIAD1376

dxr

1-deoxy-d-xylulose 5-phosphate reductoisomerase

1.1.1.267

289

0.510

362

0.984

291

0.444

0

ACIAD0643

accD

acetylCoA carboxylase, beta subunit

6.4.1.2

307

0.494

1

1.000

292

0.444

0

ACIAD3353

aroB

3-dehydroquinate synthase

4.2.3.4

252

0.547

1688

0.947

293

0.442

0

ACIAD0692

ogt

methylated-DNA--protein-cysteine methyltransferase (6-O- methylguanine-DNA methyltransferase) (O-6-methylguanine-DNA- alkyltransferase)

2.1.1.63

288

0.513

567

0.977

294

0.441

0

ACIAD1737

accB

biotin carboxyl carrier protein of acetyl-CoA carboxylase (BCCP)

301

0.500

284

0.989

295

0.440

0

ACIAD2876

sucA

2-oxoglutarate decarboxylase E1 component of the 2-oxoglutarate dehydrogenase complex

1.2.4.2

312

0.488

1

1.000

296

0.439

0

ACIAD3311

trmD

tRNA (guanine-1-)-methyltransferase.

2.1.1.-

295

0.504

362

0.984

297

0.439

0

ACIAD3638

sun

16S rRNA m5C967 SAM-dependent methyltransferase

216

0.569

2226

0.926

298

0.439

0

ACIAD0135

putative transcriptional repressor (GalR/LacI family)

255

0.543

1688

0.947

299

0.438

0

ACIAD3570

ribB/A

bifunctional protein [Includes: 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II]

3.5.4.25

313

0.485

1

1.000

300

0.437

0

ACIAD0879

fabB

beta-ketoacyl-ACP synthase I (3-oxoacyl-[acyl-carrier-protein] synthase I)

2.3.1.41

315

0.485

1

1.000

301

0.436

0

ACIAD3682

putative membrane protein insertion efficiency factor

314

0.485

1

1.000

302

0.436

0

ACIAD2599

dapD

2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase

2.3.1.117

370

0.445

284

0.989

303

0.435

6

ACIAD3159

phoL

phosphate starvation-inducible protein (PhoH-like)

230

0.561

2157

0.927

304

0.434

0

ACIAD1481

cysS

cysteinyl-tRNA synthetase

6.1.1.16

317

0.482

1

1.000

305

0.434

0

ACIAD3652

grpE

Hsp 24 nucleotide exchange factor

318

0.482

1

1.000

306

0.434

0

ACIAD0561

ispG

1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase

305

0.495

362

0.984

307

0.431

0

ACIAD0384

ubiE

S-adenosylmethionine : 2-DMK methyltransferase and 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase

2.1.1.-

303

0.496

362

0.984

308

0.431

0

ACIAD2443

prmA

methylation of 50S ribosomal subunit protein L11 (ribosomal protein L11 methyltransferase)

2.1.1.-

241

0.557

2226

0.926

309

0.430

0

ACIAD3217

rplW

50S ribosomal protein L23

308

0.493

362

0.984

310

0.429

0

ACIAD0722

nrdB

ribonucleoside-diphosphate reductase, beta subunit

1.17.4.1

321

0.475

1

1.000

311

0.428

0

ACIAD2660

lysA

diaminopimelate decarboxylase

4.1.1.20

412

0.427

1

1.000

312

0.427

7

ACIAD0802

putative bicyclomycin/multidrug transport protein (MFS superfamily)

300

0.500

846

0.974

313

0.427

0

ACIAD1262

vfr

cyclic AMP receptor protein

309

0.493

567

0.977

314

0.423

0

ACIAD3380

putative transport protein (ABC superfamily, atp_bind)

298

0.500

1079

0.967

315

0.421

0

ACIAD0588

secD

preprotein translocase, IISP family, part of the channel

330

0.466

1

1.000

316

0.420

0

ACIAD2422

conserved hypothetical protein

310

0.489

846

0.974

317

0.418

0

ACIAD0487

uup

transport protein Uup (ABC superfamily, atp_bind)

304

0.495

1079

0.967

318

0.417

0

ACIAD0429

norM

multidrug resistance protein (Na(+)/drug antiporter) (Multidrug- efflux transporter)

335

0.464

1

1.000

319

0.417

0

ACIAD3168

putative ribonuclease (Rbn)

311

0.489

967

0.973

320

0.416

0

ACIAD1738

aroQ

3-dehydroquinate dehydratase, type II

4.2.1.10

339

0.462

1

1.000

321

0.416

0

ACIAD0416

corC

magnesium and cobalt efflux protein

340

0.461

1

1.000

322

0.415

0

ACIAD0704

mscL

mechanosensitive channel

319

0.481

732

0.976

323

0.413

0

ACIAD0829

putative Maf-like protein

316

0.483

846

0.974

324

0.412

0

ACIAD3269

glyS

glycyl-tRNA synthetase, beta chain

6.1.1.14

320

0.481

732

0.976

325

0.412

0

ACIAD2844

glpD

glycerol-3-phosphate dehydrogenase

1.1.5.3

352

0.454

1

1.000

326

0.409

0

ACIAD2028

aroC

chorismate synthase

4.2.3.5

302

0.496

1255

0.957

327

0.409

0

ACIAD3587

purC

phosphoribosylaminoimidazole-succinocarboxamide synthase

6.3.2.6

353

0.454

1

1.000

328

0.409

0

ACIAD2367

soj

chromosome partitioning protein

327

0.469

362

0.984

329

0.408

0

ACIAD0658

putative sigma(54) modulation protein RpoX

293

0.504

1688

0.947

330

0.407

0

ACIAD0184

atpH

membrane-bound ATP synthase , F1 sector, delta-subunit

7.1.2.2

337

0.462

284

0.989

331

0.407

0

ACIAD2729

umuD

component of DNA polymerase V

3.4.21.-

296

0.503

1688

0.947

332

0.406

0

ACIAD0841

putative biotin--[acetyl-CoA-carboxylase] synthetase

6.3.4.15

361

0.451

1

1.000

333

0.406

0

ACIAD1252

lysC

aspartate kinase

2.7.2.4

333

0.466

362

0.984

334

0.405

0

ACIAD2927

lipB

lipoate-protein ligase B (Lipoate biosynthesis protein B)

6.-.-.-

373

0.443

1

1.000

335

0.399

0

ACIAD1375

cdsA

phosphatidate cytidylyltransferase

2.7.7.41

346

0.457

362

0.984

336

0.398

0

ACIAD0597

ilvE

branched-chain amino acid transferase

2.6.1.42

348

0.457

362

0.984

337

0.398

0

ACIAD1302

trmB

tRNA(guanine-7)methyltransferase

2.1.1.33

338

0.462

567

0.977

338

0.397

0

ACIAD0300

secE

preprotein translocase IISP family, membrane subunit

347

0.457

548

0.982

339

0.397

0

ACIAD3386

putative transcriptional accessory protein

266

0.534

2446

0.909

340

0.397

0

ACIAD1409

ppiD

peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase)

5.2.1.8

381

0.440

1

1.000

341

0.396

0

ACIAD1137

rnhA-dnaQ

bifunctional protein [Includes: ribonuclease HI; DNA polymerase III ,epsilon subunit, 3-5 exonucleolytic proofreading function]

3.1.26.4, 2.7.7.7

379

0.440

1

1.000

342

0.396

0

ACIAD3247

dxs

1-deoxyxylulose-5-phosphate synthase

2.2.1.7

354

0.453

362

0.984

343

0.395

0

ACIAD3498

prfB

peptide chain release factor 2

354

0.453

362

0.984

344

0.395

0

ACIAD1271

pyrX

aspartate carbamoyltransferase, non-catalytic chain (Dihydroorotase-like protein)

359

0.452

362

0.984

345

0.393

0

ACIAD2933

putative tRNA/rRNA methyltransferase

2.1.1.34

336

0.462

995

0.969

346

0.391

0

ACIAD1921

ppiB

peptidyl-prolyl cis-trans isomerase precursor (PPIase) (Rotamase)

5.2.1.8

350

0.456

846

0.974

347

0.390

0

ACIAD3526

crc

catabolite repression control protein

396

0.433

1

1.000

348

0.390

0

ACIAD0890

trxB

thioredoxin reductase 1

1.8.1.9

356

0.452

567

0.977

349

0.389

0

ACIAD3658

purK

phosphoribosylaminoimidazole carboxylase ATPase subunit

4.1.1.21

365

0.447

362

0.984

350

0.389

0

ACIAD2875

sucB

dihydrolipoamide succinyltransferase, E2 component of 2-oxoglutarate dehydrogenase complex

2.3.1.61

324

0.470

1255

0.957

351

0.388

0

ACIAD2874

lpd

dihydrolipoamide dehydrogenase E3 subunit of 2-oxoglutarate dehydrogenase complex (Glycine oxidation system L-factor)

1.8.1.4, 1.2.1.25

402

0.431

1

1.000

352

0.388

0

ACIAD1105

adk

adenylate kinase

2.7.4.3

360

0.452

567

0.977

353

0.388

0

ACIAD0286

hemC

porphobilinogen deaminase (PBG) (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase)

2.5.1.61

357

0.452

732

0.976

354

0.388

0

ACIAD3090

acnA

aconitate hydratase 1

4.2.1.3

323

0.471

1368

0.956

355

0.387

0

ACIAD3036

ppx

exopolyphosphatase (ExopolyPase) (Metaphosphatase)

3.6.1.11

325

0.469

1255

0.957

356

0.387

0

ACIAD2903

ispE

4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase)

2.7.1.148

384

0.438

284

0.989

357

0.386

0

ACIAD0657

rpoN

RNA polymerase sigma-54 factor

406

0.429

1

1.000

358

0.386

0

ACIAD0636

trpB

tryptophan synthase beta chain

4.2.1.20

407

0.429

1

1.000

359

0.386

0

ACIAD3611

tag

3-methyl-adenine DNA glycosylase I, constitutive

3.2.2.20

328

0.468

1255

0.957

360

0.386

0

ACIAD2996

putative hemolysin III (HLY-III)

363

0.448

567

0.977

361

0.385

0

ACIAD2968

ispA

geranyltranstransferase (farnesyldiphosphate synthase) (FPP synthase)

2.5.1.10

331

0.466

1255

0.957

362

0.384

0

ACIAD2886

gltA

citrate synthase

2.3.3.1

329

0.467

1368

0.956

363

0.384

0

ACIAD2045

bioB

biotin synthetase

2.8.1.6

362

0.450

846

0.974

364

0.384

0

ACIAD1876

gcvH

glycine cleavage complex protein H, carrier of aminomethyl moiety via covalently bound lipoyl cofactor

410

0.427

1

1.000

365

0.384

0

ACIAD1205

dps

stress response DNA-binding protein, starvation induced resistance to H2O2, ferritin-like

378

0.440

362

0.984

366

0.384

0

ACIAD3501

pdxH

pyridoxamine 5'-phosphate oxidase (acts also on pyridoxine phosphate and pyridoxine)

1.4.3.5

413

0.426

1

1.000

367

0.384

0

ACIAD2318

putative histidine triad family protein

415

0.425

1

1.000

368

0.383

0

ACIAD2091

cysE

serine acetyltransferase

2.3.1.30

368

0.447

732

0.976

369

0.383

0

ACIAD3061

panB

3-methyl-2-oxobutanoate hydroxymethyltransferase (Ketopantoate hydroxymethyltransferase)

2.1.2.11

383

0.439

362

0.984

370

0.382

0

ACIAD0099

galU

UTP-glucose-1-phosphate uridylyltransferase

2.7.7.9

322

0.475

1815

0.945

371

0.382

0

ACIAD3307

truB

tRNA pseudouridine 55 synthase

4.2.1.70

417

0.425

1

1.000

372

0.382

0

ACIAD2879

sdhB

succinate dehydrogenase, iron-sulfur subunit

1.-.-.-

422

0.423

1

1.000

373

0.381

0

ACIAD2659

dapF

diaminopimelate epimerase

5.1.1.7

560

0.381

1

1.000

374

0.381

7

ACIAD0360

pilD

type 4 prepilin-like proteins leader peptide processing enzyme (Protein secretion protein XCPA)[Includes: Leader peptidase (Prepilin peptidase); N-methyltransferase ]

3.4.23.43, 2.1.1.-

387

0.437

362

0.984

375

0.381

0

ACIAD3063

pcnB

poly(A) polymerase I (PAP)

2.7.7.19

388

0.436

362

0.984

376

0.379

0

ACIAD1308

thiG

thiamine biosynthesis protein, thiazole moiety

389

0.436

362

0.984

377

0.379

0

ACIAD0736

nuoG

NADH dehydrogenase I chain G

7.1.1.2

377

0.442

732

0.976

378

0.379

0

ACIAD1266

ilvD

dihydroxy-acid dehydratase

4.2.1.9

326

0.469

1815

0.945

379

0.377

0

ACIAD0064

putative virulence factor MviN family (multidrug/oligosaccharidyl-lipid/polysaccharide exporter superfamily)

397

0.433

362

0.984

380

0.377

0

ACIAD2003

pyrG

CTP synthase

6.3.4.2

431

0.418

1

1.000

381

0.376

0

ACIAD2002

kdsA

2-dehydro-3-deoxyphosphooctonate aldolase

2.5.1.55

430

0.418

1

1.000

382

0.376

0

ACIAD0010

putative chaperone involved in Fe-S cluster assembly and activation (HesB-like)

382

0.439

732

0.976

383

0.376

0

ACIAD1225

dacC

D-ala-D-ala-carboxypeptidase; penicillin-binding protein 5 (precursor)

3.4.16.4

351

0.456

1368

0.956

384

0.375

0

ACIAD1063

estR

esterase operon transcriptional regulator (LysR family)

334

0.464

1688

0.947

385

0.375

0

ACIAD0826

mreC

rod shape-determining protein

434

0.417

1

1.000

386

0.375

0

ACIAD0455

nudH

(di)nucleoside polyphosphate hydrolase (Ap5A pyrophosphatase)

3.6.1.-

385

0.438

732

0.976

387

0.375

0

ACIAD2371

ostA

organic solvent tolerance protein precursor or increased membrane permeability protein

437

0.416

1

1.000

388

0.374

0

ACIAD0869

rpmF

50S ribosomal protein L32

439

0.415

1

1.000

389

0.374

0

ACIAD0102

galE

UDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase)

5.1.3.2

341

0.460

1612

0.950

390

0.374

0

ACIAD0515

thyA

thymidylate synthase (TS) (TSase)

2.1.1.45

442

0.414

1

1.000

391

0.373

0

ACIAD3122

secB

molecular chaperone in protein export

391

0.435

846

0.974

392

0.372

0

ACIAD2641

lolC

transport protein of outer membrane lipoproteins (ABC superfamily, membrane)

512

0.392

846

0.974

393

0.372

7

ACIAD1115

lon

DNA-binding ATP-dependent protease La

3.4.21.53

446

0.413

1

1.000

394

0.372

0

ACIAD2373

hfq

host factor I for bacteriophage Q beta replication, a growth-related protein

398

0.433

732

0.976

395

0.371

0

ACIAD0101

pgi

glucose-6-phosphate isomerase

5.3.1.9

400

0.432

567

0.977

396

0.371

0

ACIAD2623

pal

peptidoglycan-associated lipoprotein precursor

507

0.394

995

0.969

397

0.370

170

ACIAD0463

leuC

3-isopropylmalate dehydratase (isomerase), subunit with LeuD

4.2.1.33

341

0.460

1815

0.945

398

0.370

0

ACIAD3322

ispH

4-hydroxy-3-methylbut-2-enyl diphosphate reductase (also involved in penicillin tolerance and control of the stringent response. Seems to directly or indirectly interact with relA to maintain it in an inactive form during normal growth.)

1.17.7.4

416

0.425

362

0.984

399

0.370

0

ACIAD3361

mrcA

penicillin binding protein

2.4.1.129, 3.4.-.-

426

0.420

284

0.989

400

0.370

0

ACIAD3255

hemH

ferrochelatase

4.99.1.1

399

0.432

846

0.974

401

0.369

0

ACIAD2935

serS

seryl-tRNA synthetase ; also charges selenocystein tRNA with serine

6.1.1.11

423

0.423

362

0.984

402

0.368

0

ACIAD1646

putA

bifunctional protein [Includes: proline dehydrogenase (Proline oxidase); delta-1-pyrroline-5-carboxylate dehydrogenase (P5C dehydrogenase)]

1.5.5.2, 1.2.1.88

369

0.447

1368

0.956

403

0.368

0

ACIAD3374

czcD

cation efflux system protein

459

0.409

1

1.000

404

0.368

0

ACIAD3080

pntA-1

pyridine nucleotide transhydrogenase (proton pump), alpha subunit (part1)

1.6.1.2

349

0.457

1815

0.945

405

0.367

0

ACIAD1890

fumC

fumarase C (fumarate hydratase Class II)

4.2.1.2

466

0.407

1

1.000

406

0.367

0

ACIAD3268

glyQ

glycyl-tRNA synthetase, alpha chain

6.1.1.14

409

0.428

732

0.976

407

0.366

0

ACIAD0225

dinP

DNA polymerase IV, devoid of proofreading, damage-inducible protein P

2.7.7.7

358

0.452

1688

0.947

408

0.365

0

ACIAD3065

putative nucleoside triphosphate pyrophosphohydrolase (MazG)

421

0.423

567

0.977

409

0.364

0

ACIAD0830

cafA

ribonuclease G, endoribonuclease G (cytoplasmic axial filament protein )

3.1.4.-

444

0.414

284

0.989

410

0.364

0

ACIAD1323

purF

amidophosphoribosyltransferase

2.4.2.14

477

0.404

1

1.000

411

0.363

0

ACIAD1116

folN

5-formyltetrahydrofolate cyclo-ligase

6.3.3.2

479

0.404

1

1.000

412

0.363

0

ACIAD0744

upp

uracil phosphoribosyltransferase

2.4.2.9

364

0.448

1688

0.947

413

0.362

0

ACIAD3243

ttg2B

toluene tolerance efflux transporter (ABC superfamily, membrane)

418

0.424

967

0.973

414

0.361

0

ACIAD2647

serC

3-phosphoserine aminotransferase

2.6.1.52

629

0.360

1

1.000

415

0.360

7

ACIAD1378

putative outer membrane protein

427

0.420

732

0.976

416

0.360

0

ACIAD3389

envZ

sensory histidine kinase in two-component regulatory system with OmpR

443

0.414

362

0.984

417

0.360

0

ACIAD3528

conserved hypothetical protein; putative arsenate reductase and related

332

0.466

2157

0.927

418

0.360

0

ACIAD2298

putative zinc protease

3.4.24.-

496

0.398

1

1.000

419

0.359

0

ACIAD3244

ttg2A

toluene tolerance efflux transporter (ABC superfamily, atp_bind)

419

0.424

995

0.969

420

0.359

0

ACIAD3557

phoB

positive response regulator for the pho regulon, autophosphorylates and phosphorylates sensor PhoR

450

0.412

362

0.984

421

0.359

0

ACIAD3102

ilvC

acetohydroxy acid isomeroreductase and 2-dehydropantoate 2-reductase

1.1.1.86, 1.1.1.169

451

0.412

362

0.984

422

0.358

0

ACIAD2426

cyoB

cytochrome o ubiquinol oxidase subunit I

1.10.3.-

428

0.420

846

0.974

423

0.358

0

ACIAD0068

ptk

tyrosine-protein kinase, autophosphorylates

2.7.10.2

376

0.443

1688

0.947

424

0.358

0

ACIAD2380

rsuA

16S rRNA pseudouridylate 516 synthase

4.2.1.70

468

0.406

284

0.989

425

0.357

0

ACIAD1101

pbpA

penicillin-binding protein 2

501

0.396

1

1.000

426

0.357

0

ACIAD3245

putative ATP-dependent RNA helicase

433

0.417

732

0.976

427

0.357

0

ACIAD2553

folD

bifunctional protein [Includes: 5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolase]

1.5.1.5, 3.5.4.9

441

0.414

567

0.977

428

0.356

0

ACIAD2341

pyrF

orotidine-5'-phosphate decarboxylase (OMP decarboxylase) (OMPDCase) (OMPdecase)

4.1.1.23

432

0.418

846

0.974

429

0.356

0

ACIAD1901

modA

molybdate transport protein (ABC superfamily, peri_bind)

375

0.443

1815

0.945

430

0.356

0

ACIAD1331

rpsU

30S ribosomal protein S21

472

0.405

284

0.989

431

0.356

0

ACIAD2837

dgkA

diacylglycerol kinase

2.7.1.107

367

0.447

1986

0.939

432

0.355

0

ACIAD2352

ung

uracil-DNA glycosylase

504

0.394

1

1.000

433

0.355

0

ACIAD3532

dsbD

thiol:disulfide interchange protein precursor

1.8.1.8

448

0.413

567

0.977

434

0.355

0

ACIAD3121

grx

glutaredoxin

440

0.414

846

0.974

435

0.354

0

ACIAD2657

xerC

site-specific tyrosine recombinase

606

0.366

362

0.984

436

0.354

7

ACIAD2586

putative serine protease MucD precursor

652

0.354

1

1.000

437

0.354

6

ACIAD0407

hslO

heat shock protein Hsp33

345

0.459

2226

0.926

438

0.354

0

ACIAD0875

thiD

bifunctional protein [Includes: hydroxy-methylpyrimidine kinase (HMP kinase); hydroxy-phosphomethylpyrimidine kinase (HMP-P kinase)]

2.7.4.7

445

0.413

846

0.974

439

0.353

0

ACIAD3562

pncB

nicotinate phosphoribosyltransferase

6.3.4.21

510

0.393

1

1.000

440

0.353

0

ACIAD1736

accC

biotin carboxylase (A subunit of acetyl-CoA carboxylase)

6.3.4.14

518

0.391

1

1.000

441

0.352

0

ACIAD0275

aspP

adenosine diphosphate sugar pyrophosphatase (ADP-ribose pyrophosphatase)

3.6.1.13

473

0.405

362

0.984

442

0.352

0

ACIAD3254

putative metal-binding hydrolase

452

0.411

732

0.976

443

0.352

0

ACIAD2613

dgt

deoxyguanosinetriphosphate triphosphohydrolase (dGTPase) (dGTP triphosphohydrolase)

3.1.5.1

617

0.363

362

0.984

444

0.351

9

ACIAD2362

kdsB

3-deoxy-manno-octulosonate cytidylyltransferase

2.7.7.38

435

0.417

1079

0.967

445

0.351

0

ACIAD2287

maeB

NAD(P)-dependent malic enzyme ; bifunctional: NADP-dependent malic oxidoreductase (N-terminal); phosphotransacetylase (C-terminal)]

1.1.1.40, 2.3.1.8

521

0.390

1

1.000

446

0.351

0

ACIAD1925

fda

fructose-1,6-bisphosphate aldolase, class II

4.1.2.13

460

0.409

567

0.977

447

0.351

0

ACIAD1670

putative prolyl-tRNA synthetases

393

0.434

1688

0.947

448

0.351

0

ACIAD1321

pyrD

dihydroorotate oxydase

1.3.98.1, 1.3.5.2

520

0.390

1

1.000

449

0.351

0

ACIAD2898

putative competence protein (ComL)

464

0.408

732

0.976

450

0.350

0

ACIAD1642

uppP

undecaprenylpyrophosphate phosphatase

3.6.1.27

463

0.408

732

0.976

451

0.350

0

ACIAD0735

nuoF

NADH dehydrogenase I chain F

7.1.1.2

458

0.409

732

0.976

452

0.350

0

ACIAD0596

glnE

glutamine synthetase adenylyltransferase

2.7.7.42

395

0.434

1688

0.947

453

0.350

0

ACIAD0541

ack

acetate kinase (propionate kinase)

2.7.2.1

467

0.407

567

0.977

454

0.350

0

ACIAD0308

rpoC

DNA-directed RNA polymerase beta' chain (Transcriptase beta' chain) (RNA polymerase beta' subunit)

2.7.7.6

528

0.389

1

1.000

455

0.350

0

ACIAD3585

dapA

4-hydroxy-tetrahydrodipicolinate synthase

4.3.3.7

527

0.389

1

1.000

456

0.350

0

ACIAD2880

sdhA

succinate dehydrogenase, flavoprotein subunit

1.-.-.-

457

0.409

846

0.974

457

0.349

0

ACIAD2619

tolQ

tolerance to group A colicins, single-stranded DNA filamentous phage, required for OM integrity

471

0.405

2134

0.928

458

0.349

172

ACIAD2400

copA

Copper-exporting P-type ATPase A

489

0.400

362

0.984

459

0.349

0

ACIAD2102

hrpA

ATP-dependent helicase

3.6.1.15

401

0.431

1688

0.947

460

0.349

0

ACIAD1113

rlmH

Ribosomal RNA large subunit methyltransferase H

2.1.1.-

394

0.434

1815

0.945

461

0.349

0

ACIAD0863

scpA

chromosome condensation and partitioning factor

469

0.406

567

0.977

462

0.349

0

ACIAD2566

rarD

chloramphenicol-sensitive protein

462

0.408

2277

0.923

463

0.348

5

ACIAD2070

metI

D- and L-methionine transport protein (ABC superfamily, membrane)

474

0.405

567

0.977

464

0.348

0

ACIAD3669

hpt

hypoxanthine phosphoribosyltransferase

2.4.2.8

491

0.400

362

0.984

465

0.348

0

ACIAD2450

D- and L-methionine transport protein (ABC superfamily, atp_bind) (metN-like)

404

0.430

1688

0.947

466

0.347

0

ACIAD1322

putative membrane protein required for colicin V production (CvpA)

498

0.398

362

0.984

467

0.347

0

ACIAD3619

dapB

4-hydroxy-tetrahydrodipicolinate reductase

1.17.1.8

475

0.405

732

0.976

468

0.347

0

ACIAD2265

putative rare lipoprotein A family (RlpA-like)

481

0.403

567

0.977

469

0.346

0

ACIAD3031

conserved hypothetical protein; putative integral membrane resistance protein

486

0.402

567

0.977

470

0.345

0

ACIAD2655

etfB

electron transfer flavoprotein beta-subunit

555

0.382

1612

0.950

471

0.345

7

ACIAD2372

surA

peptidyl-prolyl cis-trans isomerase

5.2.1.8

480

0.403

732

0.976

472

0.345

0

ACIAD0752

putative oxidoreductase with FAD/NAD(P)-binding domain

405

0.429

1815

0.945

473

0.345

0

ACIAD0726

bfmR

response regulator in two-component regulatory system (bfmR/bfmS)

366

0.447

2226

0.926

474

0.345

0

ACIAD0415

lnt

apolipoprotein N-acyltransferase, copper homeostasis protein

2.3.1.-

549

0.383

1

1.000

475

0.345

0

ACIAD0044

ubiG

3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase

2.1.1.64

487

0.402

567

0.977

476

0.345

0

ACIAD3306

conserved hypothetical protein; putative membrane protein

516

0.391

284

0.989

477

0.345

0

ACIAD0466

leuD

3-isopropylmalate isomerase (dehydratase), subunit with LeuC

4.2.1.33

556

0.382

1

1.000

478

0.344

0

ACIAD3242

ttg2C

toluene tolerance efflux transporter (ABC superfamily, peri-bind)

482

0.403

846

0.974

479

0.344

0

ACIAD1999

ispD

2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase

2.7.7.60

483

0.402

846

0.974

480

0.343

0

ACIAD1384

recX

regulatory protein

371

0.444

2157

0.927

481

0.343

0

ACIAD1369

glnL

sensory kinase (soluble) in two-component regulatory system

470

0.406

1079

0.967

482

0.342

0

ACIAD0063

ampD

N-acetyl-anhydromuramyl-L-alanine amidase (Regulates ampC)

447

0.413

1222

0.960

483

0.342

0

ACIAD3211

rpmC

50S ribosomal protein L29

509

0.393

362

0.984

484

0.342

0

ACIAD0551

nagZ

beta-N-acetyl-D-glucosaminidase

3.2.1.52

380

0.440

2134

0.928

485

0.341

0

ACIAD2288

cca

Multifunctional protein [Includes: CCA-adding enzyme ; 2'-nucleotidase ; 2',3'-cyclic phosphodiesterase ; Phosphatase]

2.7.7.72, 3.1.3.-, 3.1.4.-

568

0.378

1

1.000

486

0.340

0

ACIAD2283

metF

5,10-methylenetetrahydrofolate reductase

1.5.1.20

571

0.377

1

1.000

487

0.340

0

ACIAD1081

putative hemolysin-related protein

493

0.399

846

0.974

488

0.340

0

ACIAD0935

putative RNA polymerase sigma factor

344

0.459

2482

0.907

489

0.340

0

ACIAD1672

mtlD

mannitol-1-phosphate 5-dehydrogenase

1.1.1.17

476

0.404

1190

0.966

490

0.339

0

ACIAD2973

kdpE

regulator of kdp operon (transcriptional effector)

386

0.438

2157

0.927

491

0.338

0

ACIAD0724

nrdA

ribonucleoside diphosphate reductase, alpha subunit

1.17.4.1

574

0.376

1

1.000

492

0.338

0

ACIAD0444

putative transcriptional regulator

455

0.410

1255

0.957

493

0.338

0

ACIAD2644

conserved hypothetical protein

657

0.353

567

0.977

494

0.337

7

ACIAD1903

moaCB

bifunctional protein [Includes: molybdenum cofactor biosynthesis protein C; molybdenum cofactor biosynthesis protein B]

449

0.412

1439

0.953

495

0.337

0

ACIAD2620

tolR

tolerance to group A colicins, single-stranded DNA filamentous phage, required for OM integrity

583

0.372

1612

0.950

496

0.336

155

ACIAD0930

glpK

glycerol kinase

2.7.1.30

580

0.373

1

1.000

497

0.336

0

ACIAD0284

algZ

alginate biosynthesis protein

390

0.435

2226

0.926

498

0.336

0

ACIAD3095

prfC

peptide chain release factor 3

392

0.435

2226

0.926

499

0.335

0

ACIAD3399

putative peptide synthetase

456

0.409

1439

0.953

500

0.335

0

ACIAD2363

lpxK

tetraacyldisaccharide 4'-kinase (Lipid A 4'-kinase)

2.7.1.130

523

0.389

732

0.976

501

0.334

0

PhyloProfile Search: ACIAD2614