BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 0a71950bd75ae54dab4d4824c20eca30.SwissProt.fasta
12 sequences; 8,639 total letters
Query= ACIAD3675
Length=438
Score E
Sequences producing significant alignments: (Bits) Value
Q8G0Y6 Outer membrane efflux protein BepC [Brucella suis biovar 1... 135 2e-38
Q9K2Y1 Outer membrane protein TolC [Vibrio cholerae serotype O1 (... 105 1e-27
Q54001 Outer membrane protein TolC [Salmonella enteritidis] 91.3 6e-23
Q44584 Nickel-cobalt-cadmium resistance protein NccC [Alcaligenes... 67.8 2e-15
P37974 Nickel and cobalt resistance protein CnrC [Cupriavidus met... 67.4 3e-15
Q9ZHD2 Probable outer membrane lipoprotein SilC [Salmonella typhi... 57.8 4e-12
Q753W9 Probable kinetochore protein SPC24 [Eremothecium gossypii ... 41.6 2e-07
Q8BL66 Early endosome antigen 1 [Mus musculus] 42.0 5e-07
Q6NRG0 E3 ubiquitin-protein ligase rnf8-B [Xenopus laevis] 38.5 5e-06
Q15075 Early endosome antigen 1 [Homo sapiens] 38.1 8e-06
P0DPR6 Colistin resistance protein EmrA [Acinetobacter baumannii ... 36.6 2e-05
O14578 Citron Rho-interacting kinase [Homo sapiens] 37.0 2e-05
>Q8G0Y6 Outer membrane efflux protein BepC [Brucella suis biovar
1 (strain 1330)]
Length=456
Score = 135 bits (340), Expect = 2e-38
Identities = 108/419 (26%), Positives = 188/419 (45%), Gaps = 22/419 (5%)
Query 16 LLVAPALWGMT-LDEAVQHALT--YEPQLKINDLQVGRAEAELQQAQHRYGLNVSVEGQL 72
LL L G L E + AL Y+ +N + G + A + + G
Sbjct 18 LLSGTVLTGQAALSETLTGALVKAYKNNAPLNSSRAGVRIQDENVAIAKSAYRPQITGSY 77
Query 73 GVGQINNPPTYSPLFSIDERFRNTRSLMLKFDYPLYTAGRERIGIEMAHMQVAAQSQAFA 132
+ + P T +R T ++ ++ + L+ + R + A QV AQ +
Sbjct 78 NISRGKTPAT---------DYRTTGTVGIQLNQMLFDGFQTRNNVAAAETQVFAQRENLR 128
Query 133 NQQSATVLQTVQAYTDVLRQQAVLKLKNKVQANLQQSLSDAQKRLNAGVITRADLAQIQA 192
N + T+ Q V AY DV + + + L+ K A + + + A+ RL+ G TR D+AQ +A
Sbjct 129 NDEQNTLYQAVAAYMDVYQLRQIAALREKNLAAMNEQVRAARARLDVGEGTRTDVAQAEA 188
Query 193 QLAQSQADSVRAESQLSISQTRFYQLTGLTAQVLDTP----QDLPAIPGNVDDVIYAIEQ 248
+ + A A + + ++ + Q+ G L TP + LP P A+
Sbjct 189 SRSTAIAALNAARADVKTAEATYMQVVGSLPDKL-TPASAARHLPQSPSQA--YASALAS 245
Query 249 HPSLQQARFEQQVAEKQYRLSKLELRPSIGLTGRVGTQHEIKD---GESKGYLVGLKVDV 305
HP + ++ A + + L P+IGLT I G+ +G+ V++
Sbjct 246 HPGILATKYAVNAAGYNVKAKEGALLPTIGLTASASQLDTIAGTDMGDGNTASIGVGVNI 305
Query 306 PIYDNGLNKANRQKANVELELATQKINALQQALTQQAQATYFQIQAVRQNKRALEQAINA 365
PIY G A +++ +L A +++ +Q + Q + + Q++A R + A I A
Sbjct 306 PIYTGGRTSAQIRQSKEQLGQARIEVDVVQDKVRQAISSAWSQLEAARASVAANRDGIAA 365
Query 366 ASIALQFMKREQEFGTKTTTDVLNAEQSLLDVQTQKISNQQDEVVLTYQLLDQMGRLSA 424
A +AL + E++ G +TT DVLNA+ L+ VQ + + D VV +Y LL+ GR++A
Sbjct 366 AQLALDGVIEERKVGQRTTLDVLNAQNDLVAVQIALVQAEHDVVVASYALLNATGRMTA 424
>Q9K2Y1 Outer membrane protein TolC [Vibrio cholerae serotype
O1 (strain ATCC 39315 / El Tor Inaba N16961)]
Length=438
Score = 105 bits (261), Expect = 1e-27
Identities = 100/418 (24%), Positives = 172/418 (41%), Gaps = 23/418 (6%)
Query 18 VAPALWGMTLDEAVQHALTYEPQLKINDLQVGRAEAELQQAQHRYGLNVSVEGQLGVGQI 77
++ A+W L E A +PQL Q A + ++ +++ + +
Sbjct 16 LSSAVWAENLAEIYNQAKENDPQLLSVAAQRDAAFEAVTSSRSALLPQINLTAGYNINRS 75
Query 78 NNPPTYSPLFSIDERFRNTRSLMLKFDYPLYTAGRERIGIEMAHMQVAAQSQAFANQQSA 137
+ P S L S + F LY + ++ A + +A Q
Sbjct 76 DQAPRESDLLSAG----------INFSQELYQRS-SWVSLDTAEKKARQADSQYAATQQG 124
Query 138 TVLQTVQAYTDVLRQQAVLKLKNKVQANLQQSLSDAQKRLNAGVITRADLAQIQAQLAQS 197
+L+ +AY +VLR Q L+ +A + + L ++R G+ D+ QAQ
Sbjct 125 LILRVAKAYFEVLRAQDNLEFVRAEKAAVGRQLEQTKQRFEVGLSAITDVHDAQAQFDGV 184
Query 198 QADSVRAESQLSISQTRFYQLTGLTAQ---VLDTPQDLPAIPGNVDDVIY--AIEQHPSL 252
AD V AE+ L+ S ++TG VLDT + + + + A +Q+ SL
Sbjct 185 LADEVLAENSLTNSYEALREITGQEYSKLAVLDTKRFAASRTTESSEALIEKAQQQNLSL 244
Query 253 QQARFEQQVAEKQYRLSKLELRPSIGLTGRVGTQHEIKDG-------ESKGYLVGLKVDV 305
AR Q VA L+ PS+ L G + D E + +G+ + V
Sbjct 245 LAARISQDVARDNISLASSGHLPSLTLDGGYNYGNNSNDNAKNTSGEEYNDFKIGVNLKV 304
Query 306 PIYDNGLNKANRQKANVELELATQKINALQQALTQQAQATYFQIQAVRQNKRALEQAINA 365
P+Y G + ++A A+Q + A +++ + +A I A RA EQA+ +
Sbjct 305 PLYTGGNTTSLTKQAEFAYVAASQDLEAAYRSVVKDVRAYNNNINASIGALRAYEQAVIS 364
Query 366 ASIALQFMKREQEFGTKTTTDVLNAEQSLLDVQTQKISNQQDEVVLTYQLLDQMGRLS 423
A AL+ + + GT+T DVL+A + L D + + D ++ QL +G LS
Sbjct 365 AKSALEATEAGFDVGTRTIVDVLDATRRLYDANKNLSNARYDYILSVLQLRQAIGTLS 422
>Q54001 Outer membrane protein TolC [Salmonella enteritidis]
Length=491
Score = 91.3 bits (225), Expect = 6e-23
Identities = 100/443 (23%), Positives = 189/443 (43%), Gaps = 39/443 (9%)
Query 13 LVGLLVAPALWGMTLDEAVQHALTYEPQLKINDLQVGRAEAELQQAQHRYGLNVS-VEGQ 71
L+ +L+ +L G + ++ + Q ++++ ++ ++ A+ A + S + Q
Sbjct 6 LLPILIGLSLSGFSTLSQAENLMQVYQQARLSNPELRKSAADRDAAFEKINEARSPLLPQ 65
Query 72 LGVGQINNPPTYSPLFSIDERFR-NTRSLMLKFDYPLYTAGRERIGIEMAHMQVAAQSQA 130
LG+G TYS + N S L+ L+ + R G+ + Q
Sbjct 66 LGLGA---DYTYSNGYRDANGINSNETSASLQLTQTLFDMSKWR-GLTLQEKAAGIQDVT 121
Query 131 FANQQSATVLQTVQAYTDVLRQQAVLKLKNKVQANLQQSLSDAQKRLNAGVITRADLAQI 190
+ Q +L T AY VL VL + + + L +R N G++ D+
Sbjct 122 YQTDQQTLILNTANAYFKVLNAIDVLSYTQAQKEAIYRQLDQTTQRFNVGLVAITDVQNA 181
Query 191 QAQLAQSQADSVRAESQLSISQTRFYQLTGLTAQVL----------DTPQDLPAIPGNVD 240
+AQ A+ V + L + Q+TG L D P+ + A+ +
Sbjct 182 RAQYDTVLANEVTVRNNLDNAVEELRQVTGNYYPELASLNVEHFKTDKPKAVNALLKEAE 241
Query 241 DVIYAIEQHPSLQQARFEQQVAEKQYR------LSKLELRPSIGLT-----GRVGTQHEI 289
+ ++ SL QAR Q +A +Q R L L L PS G++ G +
Sbjct 242 N------RNLSLLQARLSQDLAREQIRQAQDGHLPTLNLTPSTGISDTSYSGSKTNAAQY 295
Query 290 KDGESKGYLVGLKVDVPIYDNGLNKANRQKANVELELATQKINALQQALTQQAQATYFQI 349
D +GL +P+Y G+ + ++A A++++ + +++ Q ++++ I
Sbjct 296 DDSNMGQNKIGLNFSLPLYQGGMVNSQVKQAQYNFVGASEQLESAHRSVVQTVRSSFNNI 355
Query 350 QAVRQNKRALEQAINAASIALQFMKREQEFGTKTTTDVLNAEQSLLDVQTQKISNQQDEV 409
A + A +QA+ +A +L M+ GT+T DVL+A +L D + Q+++N +
Sbjct 356 NASISSINAYKQAVVSAQSSLDAMEAGYSVGTRTIVDVLDATTTLYDAK-QQLANAR--- 411
Query 410 VLTYQLLDQMGRLSALFPINTHD 432
TY L++Q+ AL +N D
Sbjct 412 -YTY-LINQLNIKYALGTLNEQD 432
>Q44584 Nickel-cobalt-cadmium resistance protein NccC [Alcaligenes
xylosoxydans xylosoxydans]
Length=437
Score = 67.8 bits (164), Expect = 2e-15
Identities = 76/338 (22%), Positives = 135/338 (40%), Gaps = 25/338 (7%)
Query 94 RNTRSLMLKFDYPLYTAGRERIGIEMAHMQVAAQSQAFANQQSATVLQTVQAYTDVLRQQ 153
+NT S+ F+ R +G A + Q N A L A + +
Sbjct 112 QNTYSITQPFEIGGKRGARIEVGERNYEAAQARERQLRVNY--AAELAVAYATAEAAFGR 169
Query 154 AVLKLKNKVQANLQQSLSDAQKRLNAGVITRADLAQIQAQLAQSQADSVRAESQLSISQT 213
L +N AN + L+ A+ + G AQ QA ++ +QA A S ++ +
Sbjct 170 QALAEENLALAN--EELTVARALVETGKEATLRTAQAQASVSAAQAIEAAASSDVTSTLA 227
Query 214 RFYQLTGLTAQVLDTPQDLPAIPGNVDDVIYAIEQHPSLQQARFEQQVAEKQYRLSKLEL 273
R L+G T L + + + P+++ A E+ + Q + +
Sbjct 228 RLSALSGATEAYTGISSSLLSAQPAMTPGGTTTDDSPAVRTAEAERNAFDAQVNVERKRW 287
Query 274 RPSIGLTG---RVGTQHEIKDGESKGYLVGLKVDVPIYD---NGLNKANRQKANVELELA 327
P +G+T R G +E GY+VGL +P++D NG++ A ++ A + L
Sbjct 288 IPEVGITAGVRRYGWSNE------SGYIVGLTASIPLFDRNRNGIDAAVQRVAAAQARLD 341
Query 328 TQKI--NALQQALTQQAQATYFQIQAVRQNKRALEQAINAASIALQFMKREQEFGTKTTT 385
T ++ NA +++ Q AT Q+ A Q ++A +A + E G
Sbjct 342 TVRLEANAARRSAVSQVAATDKQLAAASQGEQAASEAYRVGRLG-------YEAGKTPLV 394
Query 386 DVLNAEQSLLDVQTQKISNQQDEVVLTYQLLDQMGRLS 423
++L ++L+D + I + V L GRL+
Sbjct 395 ELLAVRRALVDARQLTIDARLARVRALAALAQADGRLA 432
>P37974 Nickel and cobalt resistance protein CnrC [Cupriavidus
metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 /
CH34)]
Length=418
Score = 67.4 bits (163), Expect = 3e-15
Identities = 74/332 (22%), Positives = 136/332 (41%), Gaps = 33/332 (10%)
Query 106 PLYTAGRERIGIEMAHMQVAAQSQAFANQQSATVLQTVQAYT--DVLRQQAVLKLKNKVQ 163
P G+ IE+ AA Q A + AY + + +L +N +
Sbjct 101 PFELGGKRGARIEVGERNFAAAQARERQAQVAYAAELAVAYATAEAALGRKILATENLAR 160
Query 164 ANLQQSLSDAQKRLNAGVITRADLAQIQAQLAQSQA-------DSVRAESQLSISQTRFY 216
AN + L+ A+ +++G AQ +A +A +QA D+ +A ++LS
Sbjct 161 AN--EELAAARALVDSGKEASLRSAQAKASVAAAQAAEAAATNDATQALARLSAMSGASE 218
Query 217 QLTGLTAQVLDTPQDLPAIPGNVDDVIYAIEQHPSLQQARFEQQVAEKQYRLSKLELRPS 276
T +T+ +L T +P P A+ + PS++ A E+ + Q + + P
Sbjct 219 PYTAVTSSLLTTQAVVPNAPA-------ALAESPSVRAAEAERNALDAQVDVERKRWIPD 271
Query 277 IGLTGRVGTQHEIKDGESKGYLVGLKVDVPIYD---NGLNKANRQKANVELELATQKI-- 331
+G++ V S GY+VG+ +P++D NG+N A + A + L + ++
Sbjct 272 VGVSAGV---RRYGWTNSSGYVVGVTASIPLFDQNRNGINAAVERVAAAQARLDSVRLEA 328
Query 332 NALQQALTQQAQATYFQIQAVRQNKRALEQAINAASIALQFMKREQEFGTKTTTDVLNAE 391
N +Q+ Q Q+ A + ++A +A I E G ++L
Sbjct 329 NVARQSAISQVATADKQLAAASEGEQAAAEAYRMGRIG-------YESGKTPLMELLAVR 381
Query 392 QSLLDVQTQKISNQQDEVVLTYQLLDQMGRLS 423
++L+D + I + V L GRL+
Sbjct 382 RALVDARQLTIDARLARVRALAALAQADGRLA 413
>Q9ZHD2 Probable outer membrane lipoprotein SilC [Salmonella typhimurium]
Length=461
Score = 57.8 bits (138), Expect = 4e-12
Identities = 63/315 (20%), Positives = 137/315 (43%), Gaps = 31/315 (10%)
Query 118 EMAHMQVAAQSQAFANQQSATVLQTV------QAYTDVLRQQAVLKLKNKVQANLQQSLS 171
++ +M A + FA++++ + + Q+Y L++ + N +QS +
Sbjct 140 KLKNMSEADRQNYFASEEARRAVHILLVSNVSQSYFSQQLAYEQLRIARETLKNYEQSYA 199
Query 172 DAQKRLNAGVITRADLAQIQAQLAQSQADSVRAESQLSISQTRFYQLTGLTAQVLDTPQD 231
+++L G L Q + Q+ ++A+ + E L+ + + G T + + + +
Sbjct 200 FVEQQLVTGSTNVLALEQARGQIESTRAEIAKREGDLAQANNALQLVLG-TYRAVPSEKG 258
Query 232 LPA-------IPGNVDDVIYAIEQHPSLQQARFEQQVAEKQYRLSKLELRPSIGLT-GRV 283
+ +P N+ I + Q P + +A ++ + A+ ++ PSI LT G
Sbjct 259 IKGGEIAPVKLPPNLSSQI--LLQRPDIMEAEYQLKAADANIGAARAAFFPSITLTSGLS 316
Query 284 GTQHEIKDGESKGYLVGL-----KVDVPIYDNGLNKANRQKANVELELATQKINALQQAL 338
+ E+ + G G+ K+++PI++ G NKAN + A + + + Q+
Sbjct 317 SSSTELSSLFTSGS--GMWNFIPKIEIPIFNAGRNKANLKLAEIRQQQSVVNYEQKIQSA 374
Query 339 TQQAQATYFQIQAVRQNKRALEQAINAASIALQFMKREQEFGTKTTTDVLNAEQSLLDVQ 398
+ T ++ Q + ++ +++ I LQ + G + +VL+AE+SL
Sbjct 375 FKDVSDTLALRDSLSQQLESQQRYLDSLQITLQRARGLYASGAVSYIEVLDAERSLF--- 431
Query 399 TQKISNQQDEVVLTY 413
+ QQ + LTY
Sbjct 432 ----ATQQTILDLTY 442
Score = 32.7 bits (73), Expect = 3e-04
Identities = 42/186 (23%), Positives = 80/186 (43%), Gaps = 23/186 (12%)
Query 35 LTYEPQLKINDLQVGRAEAELQQAQHRYGLNVSVEGQLGVGQINNPPTYSPLFSIDERFR 94
L P + + Q+ A+A + A+ + ++++ L ++ S LF+
Sbjct 278 LLQRPDIMEAEYQLKAADANIGAARAAFFPSITLTSGLS----SSSTELSSLFTSGSGMW 333
Query 95 NTRSLMLKFDYPLYTAGRERIGIEMAHMQVAAQSQAFANQQSATVLQTVQ-AYTDVLRQQ 153
N + K + P++ AGR + +++A ++ Q Q+ N + Q +Q A+ DV
Sbjct 334 N---FIPKIEIPIFNAGRNKANLKLAEIR---QQQSVVNYE-----QKIQSAFKDVSDTL 382
Query 154 AVLKLKNKVQANLQQSLSDAQKRLNAGVITRADLAQIQAQLAQSQADSVRAESQLSISQT 213
A ++ +L Q L Q+ L++ IT + A A S + + AE L +Q
Sbjct 383 A-------LRDSLSQQLESQQRYLDSLQITLQRARGLYASGAVSYIEVLDAERSLFATQQ 435
Query 214 RFYQLT 219
LT
Sbjct 436 TILDLT 441
>Q753W9 Probable kinetochore protein SPC24 [Eremothecium gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)]
Length=204
Score = 41.6 bits (96), Expect = 2e-07
Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 16/162 (10%)
Query 156 LKLKNKVQANLQQSLSDAQKRLNAGVITRADLAQIQAQLAQSQADSVRAESQLSISQ--- 212
L+L N + NL++ + Q+ G ++L Q + AQ+ A+++RAE +
Sbjct 31 LQLLNATEENLRRLMQRTQQLEAKGAQELSELQAQQTERAQA-AEAMRAEKETQAQHLQA 89
Query 213 -TRFYQLTGLTAQVLDTPQDLPAIPGNVDD----VIYAIEQHPSLQ-QARFEQQVAEKQY 266
T L L ++ + Q L ++ +D+ ++ E + Q A EQQ E Q
Sbjct 90 LTHSQDLVRLANELEELEQQLVSLRAELDEGMTQLLQTSEPTAAFQGDAEHEQQSPEVQT 149
Query 267 RLSKLELRPSIGLTGRVGTQHE---IKDGESKGY-LVGLKVD 304
L KL+L S+G+T + T+H I+ G++ G L+ L+ D
Sbjct 150 NLLKLQLYSSLGVT--LDTEHNQALIERGDAAGIDLIALEDD 189
>Q8BL66 Early endosome antigen 1 [Mus musculus]
Length=1411
Score = 42.0 bits (97), Expect = 5e-07
Identities = 69/308 (22%), Positives = 129/308 (42%), Gaps = 38/308 (12%)
Query 133 NQQSAT--VLQTVQAYTDVLRQQAVLKLKNKVQANLQQSLSDAQKRLNAGVITRADLAQI 190
N++SA+ LQ D+ QQ +L +++LQ++ + ++ A R +L ++
Sbjct 326 NEESASRKTLQASLHQRDLDCQQLQARLTAS-ESSLQRAQGELSEKAEAAQKLREELREV 384
Query 191 QAQLAQSQADSVRAESQLSISQTRFYQLTGLTAQV----LDTPQDLPAIPGNVDDVIYAI 246
++ + + + + Q + QL G +Q+ L+T + L G + +
Sbjct 385 ESTRQHLKVEVKQLQQQREEKEQHGLQLQGEVSQLHCKLLETERQLGEAHGRLKEQ---- 440
Query 247 EQHPSLQQARFEQQVAEKQYRLSKLELRPSIGLTGRVGTQHEIKDG-----ESKGYLVGL 301
Q S + EQQVA+ Q +LS+LE + +T QH+++ E +
Sbjct 441 RQLSSEKLMEKEQQVADLQLKLSRLEEQLKEKVTNSTELQHQLEKSKQQHQEQQALQQSA 500
Query 302 KVDVPIYDNGLNKANRQKANVELELATQKINALQQALTQQAQATYFQIQAVRQNKRALEQ 361
+ N L + RQ + + QKI L +AL Q+ + + ++ R++ A Q
Sbjct 501 TAKLREAQNDLEQVLRQIGDKD-----QKIQNL-EALLQKGKESVSLLEKEREDLYAKIQ 554
Query 362 AINAASIALQFMKREQEFGTKTTTDVLNAEQSLLDVQTQKISNQ-----QDEVVLTYQLL 416
A + L ++ + +A Q L T+K+ NQ Q E L Q+
Sbjct 555 AGEGETAVLNQLQEKN-----------HALQQQLTQLTEKLKNQSESHKQAEENLHDQVQ 603
Query 417 DQMGRLSA 424
+Q L A
Sbjct 604 EQKAHLRA 611
Score = 32.3 bits (72), Expect = 5e-04
Identities = 58/295 (20%), Positives = 114/295 (39%), Gaps = 32/295 (11%)
Query 158 LKNKVQANLQQSLSDAQKRLNAGVITRADLAQIQAQLAQSQADSVRAESQ---------- 207
L+NK+Q Q+ + +++ + QA L Q Q+D ES+
Sbjct 992 LENKLQQQSSQAAQELAAEKGKLSALQSNYEKCQADLKQLQSDLYGKESELLATRQDLKS 1051
Query 208 ----LSISQTRFYQLTGLTAQVLDTPQDLPAIPGNVDD-----VIYAIEQHPSLQQARFE 258
L+++Q + Q+L A +++ EQ +L+ A+ E
Sbjct 1052 VEEKLTLAQEDLISNRNQIGNQNKSIQELQAAKASLEQDSAKKEALLKEQSKALEDAQRE 1111
Query 259 QQVAEKQYRLSKLELRPSIGLTGRVGTQHEIKDGESKGYLVGLKVDVPIYDNGLNKANRQ 318
+ V EK+ K +L + R + + E K + K + L A +
Sbjct 1112 KSVKEKELVAEKSKLAEMEEIKCRQEKEITKLNEELKSH----KQESIKEITNLKDAKQL 1167
Query 319 KANVELELATQKINALQQALTQQAQATYFQIQAVRQNKRALEQAINAASIALQF------ 372
+LEL ++++L+ AL Q+ ++ + V++ + ++ + L
Sbjct 1168 LIQQKLEL-QGRVDSLKAALEQEKESQQLMREQVKKEEEKRKEEFSEKEAKLHSEIKEKE 1226
Query 373 --MKREQEFGTKTTTDVLNAEQSLLDVQTQKISNQQDEVVLTYQLLDQMGRLSAL 425
MK+ +E K T V ++L V+ + S+Q+ L Q D G ++ L
Sbjct 1227 AGMKKHEENEAKLTMQVTTLNENLGTVKKEWQSSQRRVSELEKQTDDLRGEIAVL 1281
Score = 28.5 bits (62), Expect = 0.007
Identities = 92/467 (20%), Positives = 177/467 (38%), Gaps = 100/467 (21%)
Query 27 LDEAVQHALTYEPQLKINDLQVGRAEAELQQAQHRYGLNVSVEGQLGVGQINNPPTYSPL 86
L+E ++ +T +L+ + E QQ Q + L S +L Q + +
Sbjct 465 LEEQLKEKVTNSTELQ------HQLEKSKQQHQEQQALQQSATAKLREAQNDLEQVLRQI 518
Query 87 FSIDERFRNTRSLMLKFDYPLYTAGRERIGI-EMAHMQVAAQSQAFANQQSATVLQTVQA 145
D++ +N +L+ K G+E + + E + A+ QA + VL +Q
Sbjct 519 GDKDQKIQNLEALLQK--------GKESVSLLEKEREDLYAKIQA--GEGETAVLNQLQE 568
Query 146 YTDVLRQQAVL---KLKNKVQA------NLQQSLSDAQKRLNAG----VITRADLAQIQA 192
L+QQ KLKN+ ++ NL + + + L A + ++++ +
Sbjct 569 KNHALQQQLTQLTEKLKNQSESHKQAEENLHDQVQEQKAHLRAAQDRVLSLETSVSELSS 628
Query 193 QLAQSQAD--------SVRAESQLSISQTRFYQLTGL-----TAQ--VLDTPQDLPAIPG 237
QL +S+ + E LS + Q L TAQ + D Q+L +
Sbjct 629 QLNESKEKVSQLDIQIKAKTELLLSAEAAKAAQRADLQNHLDTAQHALQDKQQELNKVSV 688
Query 238 NVDDVIYAI------------------EQHPSLQQARFEQQVAEKQYRLSKLELR----- 274
+D + E+H SL+Q + + K+ LE++
Sbjct 689 QLDQLTAKFQEKQEHCIQLESHLKDHKEKHLSLEQKVEDLEGHIKKLEADALEVKASKEQ 748
Query 275 --PSIGLTGRVGTQHEIKDGESKGYL-----------VGLKVDVPIYDN-GLNKANRQKA 320
S+ ++ T E+++ E L + L+ I +N +++
Sbjct 749 ALQSLQQQRQLSTDLELRNAELSRELQEQEEVVSCTKLDLQNKSEILENIKQTLTKKEEE 808
Query 321 NV----ELELATQKINALQQALTQQAQATYFQIQAVRQNKRAL-------EQAINAASIA 369
NV E E +Q + L + QA ++ AV+ K AL ++ ++ S +
Sbjct 809 NVVLKQEFEKLSQDSKTQHKELGDRMQAAVTELTAVKAQKDALLAELSTTKEKLSKVSDS 868
Query 370 LQFMK----REQEFGTKTTTDVLNAEQSL---LDVQTQKISNQQDEV 409
L+ K +E + G D+ A + L L VQ + +Q+++
Sbjct 869 LKNSKSEFEKENQKGKAAVLDLEKACKELKHQLQVQAESALKEQEDL 915
>Q6NRG0 E3 ubiquitin-protein ligase rnf8-B [Xenopus laevis]
Length=532
Score = 38.5 bits (88), Expect = 5e-06
Identities = 42/156 (27%), Positives = 63/156 (40%), Gaps = 17/156 (11%)
Query 256 RFEQQVAEKQYRLSKLELRPS---IGLTGRVGTQHEIK------DGESKGYLVGLKVDVP 306
R Q+ EKQ ++ + P +G + Q E++ E + +L +K
Sbjct 231 RLNVQIQEKQIKMQEKLNHPQESQLGSNSYLVVQKELQALRNQLSNEQEQHLQSVKELKE 290
Query 307 IYDNGLNKANRQKANVELELATQKINALQQALTQQAQATYFQIQAVRQNKRALEQAINAA 366
I+ QK E L Q L QAL + Q +Q + +NK EQ I A
Sbjct 291 IFQEEQQSMGSQKQAEEEHLKEQ----LAQALQEHTQL----MQELNRNKNDFEQIIQAK 342
Query 367 SIALQFMKREQEFGTKTTTDVLNAEQSLLDVQTQKI 402
+ LQ K E+E +VLN +LD + Q I
Sbjct 343 NKELQETKEEKEKVCAQKEEVLNHMNDVLDNELQCI 378
>Q15075 Early endosome antigen 1 [Homo sapiens]
Length=1411
Score = 38.1 bits (87), Expect = 8e-06
Identities = 57/271 (21%), Positives = 113/271 (42%), Gaps = 32/271 (12%)
Query 147 TDVLRQQAVLKLKNKVQANLQQSLSDAQKRLNAGVITRADLAQIQAQLAQSQADSVRAES 206
T + R L K + L++ LS+ + + +A+ Q+Q Q + + ++ +S
Sbjct 358 TSLHRIHVELSEKGEATQKLKEELSEVETKYQH---LKAEFKQLQQQREEKEQHGLQLQS 414
Query 207 QLSISQTRFYQLTGLTAQVLDTPQDLPAIPGNVDDVIYAIEQHPSLQQARFEQQVAEKQY 266
+++ L +++L+T + L G + + Q S + EQQVA+ Q
Sbjct 415 EIN----------QLHSKLLETERQLGEAHGRLKEQ----RQLSSEKLMDKEQQVADLQL 460
Query 267 RLSKLELRPSIGLTGRVGTQHEI-----KDGESKGYLVGLKVDVPIYDNGLNKANRQKAN 321
+LS+LE + +T QH++ + E + + N L + RQ +
Sbjct 461 KLSRLEEQLKEKVTNSTELQHQLDKTKQQHQEQQALQQSTTAKLREAQNDLEQVLRQIGD 520
Query 322 VELELATQKINALQQALTQQAQATYFQIQAVRQNKRALEQAINAASIALQFMKRE----Q 377
+ QKI L +AL Q+++ ++ R++ A QA + L ++ + Q
Sbjct 521 KD-----QKIQNL-EALLQKSKENISLLEKEREDLYAKIQAGEGETAVLNQLQEKNHTLQ 574
Query 378 EFGTKTTTDVLNAEQSLLDVQTQKISNQQDE 408
E T+ T + N +S Q Q++
Sbjct 575 EQVTQLTEKLKNQSESHKQAQENLHDQVQEQ 605
Score = 33.1 bits (74), Expect = 3e-04
Identities = 53/275 (19%), Positives = 113/275 (41%), Gaps = 44/275 (16%)
Query 140 LQTVQAYTDVLRQQAVLKLKNKVQANLQQSLSDAQKRLNAGVITRADLAQIQAQLAQSQA 199
LQ +++ + L Q+ +N ++ +Q + +++ N +++ + IQA L Q
Sbjct 290 LQKLKSSVNELTQKNQTLTENLLKK--EQDYTKLEEKHNEESVSKKN---IQATLHQKDL 344
Query 200 DSVRAESQLSISQTRFYQLTGLTAQVLDTPQDLPAIPGNVDDVIYAIEQHPSLQQARFEQ 259
D + +S+LS S+T +++ ++ + Q L V+ QH + + +Q
Sbjct 345 DCQQLQSRLSASETSLHRIHVELSEKGEATQKLKEELSEVETKY----QHLKAEFKQLQQ 400
Query 260 QVAEKQYRLSKLELRPSIGLTGRVGTQHEIKDGESKGYLVGLKVDVPIYDNGLNKANRQK 319
Q EK+ +L Q EI SK L + RQ
Sbjct 401 QREEKEQHGLQL--------------QSEINQLHSK----------------LLETERQL 430
Query 320 ANVELELATQKINALQQALTQQAQATYFQIQAVRQNKRALEQAINAASIALQFMK----- 374
L Q+ + ++ + ++ Q Q++ R ++ E+ N+ + Q K
Sbjct 431 GEAHGRLKEQRQLSSEKLMDKEQQVADLQLKLSRLEEQLKEKVTNSTELQHQLDKTKQQH 490
Query 375 REQEFGTKTTTDVLNAEQSLLDVQTQKISNQQDEV 409
+EQ+ ++TT L Q+ L+ ++I ++ ++
Sbjct 491 QEQQALQQSTTAKLREAQNDLEQVLRQIGDKDQKI 525
Score = 30.8 bits (68), Expect = 0.001
Identities = 69/372 (19%), Positives = 144/372 (39%), Gaps = 28/372 (8%)
Query 40 QLKINDLQVGRAEAELQQAQHRYGLNVSVEGQ-LGVGQINNPPTYSPLFSIDERFRNTRS 98
+LKI LQ E +LQQ + ++ E + + V Q N + + F S
Sbjct 981 ELKIAVLQKTELENKLQQQLTQAAQELAAEKEKISVLQNNYEKSQETFKQLQSDFYGRES 1040
Query 99 LMLKFDYPLYTAGRERIGIEMAHMQVAAQSQAFANQQS-ATVLQTVQA--YTDVLRQQAV 155
+L L + + + +A + + NQ L+T +A D +++
Sbjct 1041 ELLATRQDLKSVEEK---LSLAQEDLISNRNQIGNQNKLIQELKTAKATLEQDSAKKEQQ 1097
Query 156 LKLKNKVQANLQQSLSDAQKRLNAGVITRADLAQIQAQLAQSQADSVRAESQL-SISQTR 214
L+ + K ++Q+ S +K L V ++ LA+I+ + + + + +L S
Sbjct 1098 LQERCKALQDIQKEKSLKEKEL---VNEKSKLAEIEEIKCRQEKEITKLNEELKSHKLES 1154
Query 215 FYQLTGLTAQVLDTPQDLPAIPGNVDDVIYAIEQHPSLQ-----QARFEQQVAEKQYRLS 269
++T L Q + G D + A+EQ Q Q + E++ +K++
Sbjct 1155 IKEITNLKDAKQLLIQQKLELQGKADSLKAAVEQEKRNQQILKDQVKKEEEELKKEFIEK 1214
Query 270 KLELRPSIGLTGRVGTQHEIKDGESKGYLVGLKVDVPIYDNGLNKANRQKANVE------ 323
+ +L I +HE + + + L ++ + R+ + +E
Sbjct 1215 EAKLHSEIKEKEVGMKKHEENEAKLTMQITALNENLGTVKKEWQSSQRRVSELEKQTDDL 1274
Query 324 ------LELATQKINALQQALTQQAQATYFQIQAVRQNKRALEQAINAASIALQFMKREQ 377
LE Q ++AL ++ +I+ ++ L++ ++ + A+Q + RE
Sbjct 1275 RGEIAVLEATVQNNQDERRALLERCLKGEGEIEKLQTKVLELQRKLDNTTAAVQELGREN 1334
Query 378 EFGTKTTTDVLN 389
+ T LN
Sbjct 1335 QSLQIKHTQALN 1346
Score = 29.6 bits (65), Expect = 0.003
Identities = 38/167 (23%), Positives = 72/167 (43%), Gaps = 15/167 (9%)
Query 246 IEQHPSLQQARFEQQVAEKQYRLSKLELRPSIGLTGRVGTQHEIKDGESKGYLVGLKVDV 305
+++ L+++ +++ A Q +L ++ + Q+E ++ + +G + LK
Sbjct 909 LKEQKELKKSLEKEKEASHQLKLELNSMQEQLIQAQNTLKQNEKEEQQLQGNINELK--- 965
Query 306 PIYDNGLNKANRQKANVELELA----TQKINALQQALTQQAQ---ATYFQIQAVRQNKRA 358
+ K + EL++A T+ N LQQ LTQ AQ A +I ++ N
Sbjct 966 --QSSEQKKKQIEALQGELKIAVLQKTELENKLQQQLTQAAQELAAEKEKISVLQNNYEK 1023
Query 359 LEQAINAASIALQFMKREQEFGTKTTTDVLNAEQSLLDVQTQKISNQ 405
++ + F RE E T D+ + E+ L Q ISN+
Sbjct 1024 SQETFK--QLQSDFYGRESEL-LATRQDLKSVEEKLSLAQEDLISNR 1067
Score = 28.1 bits (61), Expect = 0.010
Identities = 57/272 (21%), Positives = 112/272 (41%), Gaps = 32/272 (12%)
Query 157 KLKNKVQANLQQSLSDAQKRLNAGVITRADLAQIQAQLAQSQADSVRAESQLSISQTRFY 216
+L+NK+Q L Q+ + + + + + Q Q Q+D ES+L ++
Sbjct 991 ELENKLQQQLTQAAQELAAEKEKISVLQNNYEKSQETFKQLQSDFYGRESELLATR---Q 1047
Query 217 QLTGLTAQVLDTPQDLPAIP---GNVDDVIYAIE-QHPSLQQ--ARFEQQVAEKQYRLSK 270
L + ++ +DL + GN + +I ++ +L+Q A+ EQQ+ E+ L
Sbjct 1048 DLKSVEEKLSLAQEDLISNRNQIGNQNKLIQELKTAKATLEQDSAKKEQQLQERCKALQD 1107
Query 271 LELRPSIGLTGRVGTQHEIKDGESKGYLVGLKVDVPIYDNGLNKANRQKANVELE----- 325
++ S+ + E+ + +SK L ++ + + K N + + +LE
Sbjct 1108 IQKEKSL-------KEKELVNEKSK--LAEIEEIKCRQEKEITKLNEELKSHKLESIKEI 1158
Query 326 --LATQKINALQQALTQQAQATYFQIQAVRQNKRALEQAINAASIALQFMKREQEFGTKT 383
L K +QQ L Q +A + AV Q KR N + Q K E+E +
Sbjct 1159 TNLKDAKQLLIQQKLELQGKADSLK-AAVEQEKR------NQQILKDQVKKEEEELKKEF 1211
Query 384 TTDVLNAEQSLLDVQTQKISNQQDEVVLTYQL 415
+ + + ++++E LT Q+
Sbjct 1212 IEKEAKLHSEIKEKEVGMKKHEENEAKLTMQI 1243
Score = 27.3 bits (59), Expect = 0.017
Identities = 58/270 (21%), Positives = 109/270 (40%), Gaps = 35/270 (13%)
Query 165 NLQQSLSDAQKRLNAGVITRADL-AQIQAQLAQSQAD-SVRAESQLSISQTRFYQLTGLT 222
+L+Q L +AQ N + DL Q AQLA AD + + + S+ + ++T LT
Sbjct 139 SLEQQLEEAQTE-NFNIKQMKDLFEQKAAQLATEIADIKSKYDEERSLREAAEQKVTRLT 197
Query 223 AQVLDTPQDLPAIPGNVDDVIYAIEQHPSLQQ-ARFEQQVAEKQYRLSKLELRPSIGLTG 281
++L + D+ + Q P ++ A ++++ + Q + + L
Sbjct 198 -------EELNKEATVIQDLKTELLQRPGIEDVAVLKKELVQVQTLMDNMTLE------- 243
Query 282 RVGTQHEIKDGESK--GYLVGLKVDVPIYDNGLNKANRQKANVELELATQKINALQQALT 339
R ++KD K + + + L K ++ A EL QK+ + LT
Sbjct 244 RERESEKLKDECKKLQSQYASSEATISQLRSELAKGPQEVAVYVQEL--QKLKSSVNELT 301
Query 340 QQAQATYFQIQAVRQNKRALEQAINAASIA---LQFMKREQEF----------GTKTTTD 386
Q+ Q + Q+ LE+ N S++ +Q +++ ++T+
Sbjct 302 QKNQTLTENLLKKEQDYTKLEEKHNEESVSKKNIQATLHQKDLDCQQLQSRLSASETSLH 361
Query 387 VLNAEQSLLDVQTQKISNQQDEVVLTYQLL 416
++ E S TQK+ + EV YQ L
Sbjct 362 RIHVELSEKGEATQKLKEELSEVETKYQHL 391
Score = 22.7 bits (47), Expect = 0.45
Identities = 59/295 (20%), Positives = 119/295 (40%), Gaps = 27/295 (9%)
Query 127 QSQAFANQQSATVLQTVQAYTDVLRQQAVLKLKNKVQANLQQSLSDAQKRLNAGVITRAD 186
+ QA +A + + VLRQ + K++ NL+ L +++ ++ R D
Sbjct 492 EQQALQQSTTAKLREAQNDLEQVLRQ---IGDKDQKIQNLEALLQKSKENISLLEKERED 548
Query 187 L-AQIQAQLAQSQADSVRAESQLSISQTRFYQLTGLTAQVLDTPQDLPAIPGNVDDVIYA 245
L A+IQA ++ + E ++ + Q+T LT ++ + + N+ D +
Sbjct 549 LYAKIQAGEGETAVLNQLQEKNHTLQE----QVTQLTEKLKNQSESHKQAQENLHDQVQE 604
Query 246 IEQHPSLQQAR---FEQQVAEKQYRLSKLELRPSIGLTGRVGTQHEI---KDGESKGYLV 299
+ H Q R E V E +L++ + + S L ++ + E+ +
Sbjct 605 QKAHLRAAQDRVLSLETSVNELNSQLNESKEKVS-QLDIQIKAKTELLLSAEAAKTAQRA 663
Query 300 GLKVDVPIYDNGLNKANRQ--KANVELELATQKINALQQALTQQAQATYFQIQAVRQNKR 357
L+ + N L ++ K +L+ T K+ Q+ +Q ++ ++
Sbjct 664 DLQNHLDTAQNALQDKQQELNKITTQLDQVTAKLQDKQEHCSQLES----HLKEYKEKYL 719
Query 358 ALEQAINAASIALQFMKREQEFGTKTTTDVLNAEQSLLDVQTQKISNQQDEVVLT 412
+LEQ + Q K E + + + EQ+L D+Q Q+ N E+ T
Sbjct 720 SLEQ--KTEELEGQIKKLEAD----SLEVKASKEQALQDLQQQRQLNTDLELRAT 768
>P0DPR6 Colistin resistance protein EmrA [Acinetobacter baumannii
(strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 /
5377)]
Length=353
Score = 36.6 bits (83), Expect = 2e-05
Identities = 48/211 (23%), Positives = 85/211 (40%), Gaps = 48/211 (23%)
Query 108 YTAGRERIGIEMAHMQVAAQSQAFANQQSATVLQTVQAYTDVLRQQAVLKLKNKVQANLQ 167
Y R + ++ A + V Q++ A ++A + V+ QA L A L+
Sbjct 97 YDQARSVVSLKEAALGVQQQNEKSARSS------IIEANSGVVAAQADL-------ARLK 143
Query 168 QSLSDAQKRLNAGVITRADLAQIQAQLAQSQADSVRAESQLSISQTRFYQLTGLTAQVLD 227
+ Q L GVITR + IQ+Q +QA +A++ ++ ++ + L AQ+L
Sbjct 144 KEFERYQDLLKDGVITRQNFEGIQSQYLTAQAQLSKAQAAVNAAEAQLGSLQASRAQLLA 203
Query 228 TPQDLPA-----------------IPGNVDDV-------------IYAIEQHPSLQ-QAR 256
Q A + G + + + AI SL QA
Sbjct 204 DIQSSHANLNLYQVDLASSKVVSPVSGKIGSLAIQKGSRVSPQTRLMAIIPENSLYVQAN 263
Query 257 FEQQVAEKQYRLSKLELR----PSIGLTGRV 283
F++ EK + K++L+ PS+ TG++
Sbjct 264 FKETQIEKMHIGQKVKLKLDAYPSLNFTGKI 294
>O14578 Citron Rho-interacting kinase [Homo sapiens]
Length=2027
Score = 37.0 bits (84), Expect = 2e-05
Identities = 48/248 (19%), Positives = 103/248 (42%), Gaps = 36/248 (15%)
Query 161 KVQANLQQSLSDAQKRLNAGVITRADLAQIQAQLAQSQADSVRAESQLSISQTRFYQLTG 220
K+ A Q + + Q++L V + ++ + Q++ RAE +L Q R G
Sbjct 629 KINAEQQLKIQELQEKLEKAVKASTEATELLQNIRQAKE---RAERELEKLQNREDSSEG 685
Query 221 LTAQVLDTPQDLPAIPGNVDDVIYAIEQHPSLQQARFEQQVAEKQYRLSKLELRPSIGLT 280
+ ++++ ++L +E H ++ +E+++ ++ K +L L
Sbjct 686 IRKKLVEA-EELEEKHREAQVSAQHLEVHLKQKEQHYEEKIKVLDNQIKK-DLADKETLE 743
Query 281 GRVGTQHEIKDGESKGYLVGLKVDVPIYDNGLNKANRQKANVELELATQKINALQQALTQ 340
+ Q ++ KG ++ + QKA + KI +L+Q + +
Sbjct 744 NMM--QRHEEEAHEKGKIL----------------SEQKAMINA--MDSKIRSLEQRIVE 783
Query 341 QAQATYFQIQA---VRQNKRALEQAINAASIALQFMKREQEFGTKTTTDVLNAEQSLLDV 397
++A + ++N +A E+ I+ R+Q+F +T L A+ L+
Sbjct 784 LSEANKLAANSSLFTQRNMKAQEEMISEL--------RQQKFYLETQAGKLEAQNRKLEE 835
Query 398 QTQKISNQ 405
Q +KIS+Q
Sbjct 836 QLEKISHQ 843
Score = 27.3 bits (59), Expect = 0.017
Identities = 50/240 (21%), Positives = 95/240 (40%), Gaps = 29/240 (12%)
Query 145 AYTDVLRQQAVLKLKNKVQANLQQSLSDAQKRLNAGVITRADLAQIQAQLAQSQADSVRA 204
A T + ++ ++K K LQ S K +++++A L+Q + + +
Sbjct 442 AKTSSMEKKLLIKSKE-----LQDSQDKCHKMEQEMTRLHRRVSEVEAVLSQKEVELKAS 496
Query 205 ESQLSI-SQTRFYQLTGLTAQVLDTPQDLPAIPGNVDDVIYAIEQHPSLQQARFEQQVAE 263
E+Q S+ Q +T ++ Q + D + + H +Q+R Q++ E
Sbjct 497 ETQRSLLEQDLATYITECSSLKRSLEQARMEVSQEDDKALQLL--HDIREQSRKLQEIKE 554
Query 264 KQY-------RLSKLELRPSIGLTGRVGTQHEIKDGESKGYLVGLKVDVPIYDNGLNKAN 316
++Y RL +L + R +E + ES+ K + L KA
Sbjct 555 QEYQAQVEEMRLMMNQLEEDLVSARRRSDLYESELRESRLAAEEFKRKATECQHKLLKAK 614
Query 317 RQ------------KANVELELATQKI-NALQQALTQQAQATYFQIQAVRQNKRALEQAI 363
Q K N E +L Q++ L++A+ +AT +Q +RQ K E+ +
Sbjct 615 DQGKPEVGEYAKLEKINAEQQLKIQELQEKLEKAVKASTEATEL-LQNIRQAKERAEREL 673
Score = 22.7 bits (47), Expect = 0.46
Identities = 56/320 (18%), Positives = 132/320 (41%), Gaps = 22/320 (7%)
Query 97 RSLMLKFDYPLYTAGRERIGIEMAHMQVAAQSQAFANQQSATVLQTVQAYTDVLRQQAVL 156
R + L+ + R+ ++++ + +Q A ++A Q QA T++ ++
Sbjct 859 REVSLEHEEQKLELKRQLTELQLSLQERESQLTALQAARAALESQLRQAKTEL--EETTA 916
Query 157 KLKNKVQANLQQSLSDAQKRLNAGVITRADLAQIQAQLAQSQADSVRAESQLSISQTRFY 216
+ + ++QA L + Q++ +A + + ++ QL Q D+ +Q +
Sbjct 917 EAEEEIQA-LTAHRDEIQRKFDALRNSCTVITDLEEQLNQLTEDNAELNNQNFYLSKQLD 975
Query 217 QLTGLTAQVLDTPQDLPAIPGNVDDVIYAIEQHPSLQQA------RFEQQVAEKQYRLSK 270
+ +G +++ ++ + + + + +A E+QV + + +
Sbjct 976 EASGANDEIVQLRSEVDHLRREITEREMQLTSQKQTMEALKTTCTMLEEQVMDLEALNDE 1035
Query 271 L-----ELRPSIGLTGRVGTQHEIKDGESKGYLVGLKVDVPIYDNGLNKANRQKANVELE 325
L + + G +Q E + E + L K D + ++ RQ + ++
Sbjct 1036 LLEKERQWEAWRSVLGDEKSQFECRVRELQRMLDTEKQSRARADQRITES-RQVVELAVK 1094
Query 326 LATQKINALQQALTQQ---AQATYFQIQAVRQNKRALEQAINAASIALQFMKREQEFGTK 382
+I ALQQAL +Q A++ ++ + + LE +NA S+ Q ++ E+E +
Sbjct 1095 EHKAEILALQQALKEQKLKAESLSDKLNDLEKKHAMLE--MNARSLQ-QKLETERELKQR 1151
Query 383 TTTDVLNAEQSLLDVQTQKI 402
+ +Q +D+Q I
Sbjct 1152 LLEEQAKLQQQ-MDLQKNHI 1170
Score = 20.4 bits (41), Expect = 2.4
Identities = 22/101 (22%), Positives = 41/101 (41%), Gaps = 3/101 (3%)
Query 314 KANRQKANVELELATQKINALQQALTQQAQATYFQIQAVRQNKRALEQAINAASIALQFM 373
K ++ EL+L+ Q+ + AL A Q+ RQ K LE+ A +Q +
Sbjct 869 KLELKRQLTELQLSLQERESQLTALQAARAALESQL---RQAKTELEETTAEAEEEIQAL 925
Query 374 KREQEFGTKTTTDVLNAEQSLLDVQTQKISNQQDEVVLTYQ 414
++ + + N+ + D++ Q +D L Q
Sbjct 926 TAHRDEIQRKFDALRNSCTVITDLEEQLNQLTEDNAELNNQ 966
Lambda K H a alpha
0.317 0.130 0.353 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3081155
Database: 0a71950bd75ae54dab4d4824c20eca30.SwissProt.fasta
Posted date: May 20, 2024 6:01 AM
Number of letters in database: 8,639
Number of sequences in database: 12
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
