BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: d4da9ecdb6e338d1ab9099ae42f6666a.TrEMBL.fasta
22 sequences; 6,629 total letters
Query= ACIAD3651
Length=309
Score E
Sequences producing significant alignments: (Bits) Value
Q6F6N5 Putative transcriptional regulator [Acinetobacter baylyi (... 619 0.0
A0A7G2SG09 LysR family transcriptional regulator [Acinetobacter sp] 599 0.0
N9AJT4 HTH lysR-type domain-containing protein [Acinetobacter sol... 488 3e-179
A0A3R9B825 LysR family transcriptional regulator [Acinetobacter s... 488 3e-179
A0A1P8EL44 LysR family transcriptional regulator [Acinetobacter s... 485 3e-178
A0A0M1I3F6 LysR family transcriptional regulator [Acinetobacter s... 484 1e-177
A0A3A8E8W4 LysR family transcriptional regulator [Acinetobacter g... 451 2e-164
A0A3D2SN82 LysR family transcriptional regulator [Acinetobacter u... 447 5e-163
A0A427PRY8 LysR family transcriptional regulator [Acinetobacter s... 446 1e-162
A0A7T9Z7J7 LysR family transcriptional regulator [Acinetobacter u... 445 3e-162
A0A009ZJY4 Bacterial regulatory helix-turn-helix, lysR family pro... 444 4e-162
B8Y3J9 LysR [Actinobacillus pleuropneumoniae] 161 5e-51
B4XH96 LysR [Actinobacillus pleuropneumoniae] 158 1e-49
D2XDF4 Putative regulator [Pseudomonas sp. NyZ402] 146 6e-45
C6FI39 PnpR [Pseudomonas putida] 146 6e-45
T2D2H8 Putative LysR family transcriptional regulator [mixed cult... 145 9e-45
Q9JPU9 HTH-type transcriptional regulator CrgA [Neisseria meningi... 142 1e-43
B6RAT8 PtrA [Pseudomonas chlororaphis] 142 1e-43
Q9JXW7 HTH-type transcriptional regulator CrgA [Neisseria meningi... 139 3e-42
Q93UN6 LysR family transcriptional regulator [Vibrio vulnificus] 137 8e-42
B1GRM5 LysR family regulatory protein [Pseudomonas fluorescens] 137 1e-41
A0A2S9PBS7 Putative transcriptional regulator [Yersinia pestis] 132 1e-39
>Q6F6N5 Putative transcriptional regulator [Acinetobacter baylyi
(strain ATCC 33305 / BD413 / ADP1)]
Length=308
Score = 619 bits (1596), Expect = 0.0
Identities = 307/308 (99%), Positives = 308/308 (100%), Gaps = 0/308 (0%)
Query 1 LHILQQFQITIMDTLKAIQVFVTIAQQGSLTKAADQLNYSKAMVSRYLDHLEHVYSVRLF 60
+HILQQFQITIMDTLKAIQVFVTIAQQGSLTKAADQLNYSKAMVSRYLDHLEHVYSVRLF
Sbjct 1 MHILQQFQITIMDTLKAIQVFVTIAQQGSLTKAADQLNYSKAMVSRYLDHLEHVYSVRLF 60
Query 61 QRNTRKISLTPYGEKALHYCENILQQHNLLHDLAAHEQQSGVIRLTCGLFLYQLGLNRCL 120
QRNTRKISLTPYGEKALHYCENILQQHNLLHDLAAHEQQSGVIRLTCGLFLYQLGLNRCL
Sbjct 61 QRNTRKISLTPYGEKALHYCENILQQHNLLHDLAAHEQQSGVIRLTCGLFLYQLGLNRCL 120
Query 121 RAFKTEYPEIQFDLSLTENALDLIDGNIDLALRITQKVADGLIARPIFDIASTFCAHPDY 180
RAFKTEYPEIQFDLSLTENALDLIDGNIDLALRITQKVADGLIARPIFDIASTFCAHPDY
Sbjct 121 RAFKTEYPEIQFDLSLTENALDLIDGNIDLALRITQKVADGLIARPIFDIASTFCAHPDY 180
Query 181 LAQYPTLSHPSQLMQHQCITHQSHSQYWTMTDNEQQPQNYPINSSFKSNDVNALYDMCLH 240
LAQYPTLSHPSQLMQHQCITHQSHSQYWTMTDNEQQPQNYPINSSFKSNDVNALYDMCLH
Sbjct 181 LAQYPTLSHPSQLMQHQCITHQSHSQYWTMTDNEQQPQNYPINSSFKSNDVNALYDMCLH 240
Query 241 AQGIAMLPTLMVKDDLAAGRLIRILPDFSAVDLPLSLVYASREHLPQMTQLLIAFLIEHL 300
AQGIAMLPTLMVKDDLAAGRLIRILPDFSAVDLPLSLVYASREHLPQMTQLLIAFLIEHL
Sbjct 241 AQGIAMLPTLMVKDDLAAGRLIRILPDFSAVDLPLSLVYASREHLPQMTQLLIAFLIEHL 300
Query 301 GNDLNPSI 308
GNDLNPSI
Sbjct 301 GNDLNPSI 308
>A0A7G2SG09 LysR family transcriptional regulator [Acinetobacter
sp]
Length=297
Score = 599 bits (1544), Expect = 0.0
Identities = 297/297 (100%), Positives = 297/297 (100%), Gaps = 0/297 (0%)
Query 12 MDTLKAIQVFVTIAQQGSLTKAADQLNYSKAMVSRYLDHLEHVYSVRLFQRNTRKISLTP 71
MDTLKAIQVFVTIAQQGSLTKAADQLNYSKAMVSRYLDHLEHVYSVRLFQRNTRKISLTP
Sbjct 1 MDTLKAIQVFVTIAQQGSLTKAADQLNYSKAMVSRYLDHLEHVYSVRLFQRNTRKISLTP 60
Query 72 YGEKALHYCENILQQHNLLHDLAAHEQQSGVIRLTCGLFLYQLGLNRCLRAFKTEYPEIQ 131
YGEKALHYCENILQQHNLLHDLAAHEQQSGVIRLTCGLFLYQLGLNRCLRAFKTEYPEIQ
Sbjct 61 YGEKALHYCENILQQHNLLHDLAAHEQQSGVIRLTCGLFLYQLGLNRCLRAFKTEYPEIQ 120
Query 132 FDLSLTENALDLIDGNIDLALRITQKVADGLIARPIFDIASTFCAHPDYLAQYPTLSHPS 191
FDLSLTENALDLIDGNIDLALRITQKVADGLIARPIFDIASTFCAHPDYLAQYPTLSHPS
Sbjct 121 FDLSLTENALDLIDGNIDLALRITQKVADGLIARPIFDIASTFCAHPDYLAQYPTLSHPS 180
Query 192 QLMQHQCITHQSHSQYWTMTDNEQQPQNYPINSSFKSNDVNALYDMCLHAQGIAMLPTLM 251
QLMQHQCITHQSHSQYWTMTDNEQQPQNYPINSSFKSNDVNALYDMCLHAQGIAMLPTLM
Sbjct 181 QLMQHQCITHQSHSQYWTMTDNEQQPQNYPINSSFKSNDVNALYDMCLHAQGIAMLPTLM 240
Query 252 VKDDLAAGRLIRILPDFSAVDLPLSLVYASREHLPQMTQLLIAFLIEHLGNDLNPSI 308
VKDDLAAGRLIRILPDFSAVDLPLSLVYASREHLPQMTQLLIAFLIEHLGNDLNPSI
Sbjct 241 VKDDLAAGRLIRILPDFSAVDLPLSLVYASREHLPQMTQLLIAFLIEHLGNDLNPSI 297
>N9AJT4 HTH lysR-type domain-containing protein [Acinetobacter
soli NIPH 2899]
Length=301
Score = 488 bits (1256), Expect = 3e-179
Identities = 235/295 (80%), Positives = 267/295 (91%), Gaps = 0/295 (0%)
Query 11 IMDTLKAIQVFVTIAQQGSLTKAADQLNYSKAMVSRYLDHLEHVYSVRLFQRNTRKISLT 70
+MDTLKA++VFV IA GSL +AADQL+YS+AMVSRYL HLEH +S+RLFQRNTRKISLT
Sbjct 4 MMDTLKAMRVFVAIAHHGSLARAADQLDYSRAMVSRYLHHLEHTFSIRLFQRNTRKISLT 63
Query 71 PYGEKALHYCENILQQHNLLHDLAAHEQQSGVIRLTCGLFLYQLGLNRCLRAFKTEYPEI 130
P GEKAL YCENILQQ LLHDLAAHEQQSG IRLTCGLFLYQLGLNRCLRAF+ YP+I
Sbjct 64 PSGEKALRYCENILQQQLLLHDLAAHEQQSGSIRLTCGLFLYQLGLNRCLRAFQAAYPQI 123
Query 131 QFDLSLTENALDLIDGNIDLALRITQKVADGLIARPIFDIASTFCAHPDYLAQYPTLSHP 190
QFDL+LTENALDLIDGNIDLALRITQK+ADGLIARPI+ IASTFCAHPDYLAQ P L+HP
Sbjct 124 QFDLTLTENALDLIDGNIDLALRITQKIADGLIARPIYTIASTFCAHPDYLAQAPELNHP 183
Query 191 SQLMQHQCITHQSHSQYWTMTDNEQQPQNYPINSSFKSNDVNALYDMCLHAQGIAMLPTL 250
SQL+QH CI+HQ +SQYWT+ D EQ PQNYPI SSFKSNDVNALYDMC++ QGIAMLP+L
Sbjct 184 SQLLQHACISHQHYSQYWTLIDAEQHPQNYPIQSSFKSNDVNALYDMCINGQGIAMLPSL 243
Query 251 MVKDDLAAGRLIRILPDFSAVDLPLSLVYASREHLPQMTQLLIAFLIEHLGNDLN 305
+V+ DLA GRL+R+LP+++A+DL LSLVYASR+HLP MTQ+LIAFL+EHLGN LN
Sbjct 244 LVQQDLAMGRLVRVLPEYTAIDLSLSLVYASRQHLPHMTQILIAFLMEHLGNYLN 298
>A0A3R9B825 LysR family transcriptional regulator [Acinetobacter
soli]
Length=301
Score = 488 bits (1256), Expect = 3e-179
Identities = 235/295 (80%), Positives = 267/295 (91%), Gaps = 0/295 (0%)
Query 11 IMDTLKAIQVFVTIAQQGSLTKAADQLNYSKAMVSRYLDHLEHVYSVRLFQRNTRKISLT 70
+MDTLKA++VFV IA GSL +AADQL+YS+AMVSRYL HLEH +S RLFQRNTRKISLT
Sbjct 4 MMDTLKAMRVFVAIAHHGSLARAADQLDYSRAMVSRYLHHLEHTFSTRLFQRNTRKISLT 63
Query 71 PYGEKALHYCENILQQHNLLHDLAAHEQQSGVIRLTCGLFLYQLGLNRCLRAFKTEYPEI 130
P GEKAL YCENILQQ LLHDLAAHEQQSG IRLTCGLFLYQLGLNRCLRAF+ +YP+I
Sbjct 64 PSGEKALRYCENILQQQLLLHDLAAHEQQSGSIRLTCGLFLYQLGLNRCLRAFQADYPQI 123
Query 131 QFDLSLTENALDLIDGNIDLALRITQKVADGLIARPIFDIASTFCAHPDYLAQYPTLSHP 190
QFDL+LTENALDLIDGNIDLALRITQK+ADGLIARPI+ IASTFCAHPDYLAQ P L+HP
Sbjct 124 QFDLTLTENALDLIDGNIDLALRITQKIADGLIARPIYTIASTFCAHPDYLAQAPELNHP 183
Query 191 SQLMQHQCITHQSHSQYWTMTDNEQQPQNYPINSSFKSNDVNALYDMCLHAQGIAMLPTL 250
SQL+QH CI+HQ +SQYWT+ D EQ PQNYPI SSFKSNDVNALYDMC++ QGIAMLP+L
Sbjct 184 SQLLQHACISHQHYSQYWTLIDAEQHPQNYPIQSSFKSNDVNALYDMCINGQGIAMLPSL 243
Query 251 MVKDDLAAGRLIRILPDFSAVDLPLSLVYASREHLPQMTQLLIAFLIEHLGNDLN 305
+V+ DLA GRL+R+LP+++A+DL LSLVYASR+HLP MTQ+LIAFL+EHLGN LN
Sbjct 244 LVQQDLAMGRLVRVLPEYTAIDLSLSLVYASRQHLPHMTQILIAFLMEHLGNYLN 298
>A0A1P8EL44 LysR family transcriptional regulator [Acinetobacter
soli]
Length=297
Score = 485 bits (1249), Expect = 3e-178
Identities = 234/294 (80%), Positives = 265/294 (90%), Gaps = 0/294 (0%)
Query 12 MDTLKAIQVFVTIAQQGSLTKAADQLNYSKAMVSRYLDHLEHVYSVRLFQRNTRKISLTP 71
MDTLKA++VFV IA GSL +AADQL+YS+AMVSRYL HLEH +S+RLFQRNTRKISLTP
Sbjct 1 MDTLKAMRVFVAIAHHGSLARAADQLDYSRAMVSRYLHHLEHTFSIRLFQRNTRKISLTP 60
Query 72 YGEKALHYCENILQQHNLLHDLAAHEQQSGVIRLTCGLFLYQLGLNRCLRAFKTEYPEIQ 131
GEKAL YCENILQQ LLHDLAAHEQQSG IRLTCGLFLYQLGLNRCLRAF+ YP+IQ
Sbjct 61 SGEKALRYCENILQQQLLLHDLAAHEQQSGSIRLTCGLFLYQLGLNRCLRAFQAAYPQIQ 120
Query 132 FDLSLTENALDLIDGNIDLALRITQKVADGLIARPIFDIASTFCAHPDYLAQYPTLSHPS 191
FDL+LTENALDLIDGNIDLALRITQK+ADGLIARPI+ IASTFCAHPDYLAQ P L+HPS
Sbjct 121 FDLTLTENALDLIDGNIDLALRITQKIADGLIARPIYTIASTFCAHPDYLAQAPELNHPS 180
Query 192 QLMQHQCITHQSHSQYWTMTDNEQQPQNYPINSSFKSNDVNALYDMCLHAQGIAMLPTLM 251
QL+QH CI+HQ +SQYWT+ D EQ PQNYPI SSFKSNDVNALYDMC++ QGIAMLP+L+
Sbjct 181 QLLQHACISHQHYSQYWTLIDAEQHPQNYPIQSSFKSNDVNALYDMCINGQGIAMLPSLL 240
Query 252 VKDDLAAGRLIRILPDFSAVDLPLSLVYASREHLPQMTQLLIAFLIEHLGNDLN 305
V+ DLA RL+R+LP+++A+DL LSLVYASR+HLP MTQ+LIAFL+EHLGN LN
Sbjct 241 VQQDLAMSRLVRVLPEYTAIDLSLSLVYASRQHLPHMTQILIAFLMEHLGNYLN 294
>A0A0M1I3F6 LysR family transcriptional regulator [Acinetobacter
sp. C15]
Length=297
Score = 484 bits (1245), Expect = 1e-177
Identities = 234/294 (80%), Positives = 265/294 (90%), Gaps = 0/294 (0%)
Query 12 MDTLKAIQVFVTIAQQGSLTKAADQLNYSKAMVSRYLDHLEHVYSVRLFQRNTRKISLTP 71
MDTLKA++VFV IA GSL +AADQL+YS+AMVSRYL HLEH +S+RLFQRNTRKISLT
Sbjct 1 MDTLKAMRVFVAIAHHGSLARAADQLDYSRAMVSRYLHHLEHTFSIRLFQRNTRKISLTL 60
Query 72 YGEKALHYCENILQQHNLLHDLAAHEQQSGVIRLTCGLFLYQLGLNRCLRAFKTEYPEIQ 131
GEKAL YCENILQQ LLHDLAAHEQQSG IRLTCGLFLYQLGLNRCLRAF+ YP+IQ
Sbjct 61 SGEKALRYCENILQQQLLLHDLAAHEQQSGSIRLTCGLFLYQLGLNRCLRAFQAAYPQIQ 120
Query 132 FDLSLTENALDLIDGNIDLALRITQKVADGLIARPIFDIASTFCAHPDYLAQYPTLSHPS 191
FDL+LTENALDLIDGNIDLALRITQK+ADGLIARPI+ IASTFCAHPDYLAQ P L+HPS
Sbjct 121 FDLTLTENALDLIDGNIDLALRITQKIADGLIARPIYTIASTFCAHPDYLAQAPELNHPS 180
Query 192 QLMQHQCITHQSHSQYWTMTDNEQQPQNYPINSSFKSNDVNALYDMCLHAQGIAMLPTLM 251
QL+QH CI+HQ +SQYWT+ D EQ PQNYPI SSFKSNDVNALYDMC++ QGIAMLP+L+
Sbjct 181 QLLQHACISHQHYSQYWTLIDAEQHPQNYPIQSSFKSNDVNALYDMCINGQGIAMLPSLL 240
Query 252 VKDDLAAGRLIRILPDFSAVDLPLSLVYASREHLPQMTQLLIAFLIEHLGNDLN 305
V+ DLA GRL+R+LP+++A+DL LSLVYASR+HLP MTQ+LIAFL+EHLGN LN
Sbjct 241 VQQDLAMGRLVRVLPEYTAIDLSLSLVYASRQHLPHMTQILIAFLMEHLGNYLN 294
>A0A3A8E8W4 LysR family transcriptional regulator [Acinetobacter
guerrae]
Length=297
Score = 451 bits (1159), Expect = 2e-164
Identities = 218/294 (74%), Positives = 256/294 (87%), Gaps = 0/294 (0%)
Query 12 MDTLKAIQVFVTIAQQGSLTKAADQLNYSKAMVSRYLDHLEHVYSVRLFQRNTRKISLTP 71
MDT+KAIQVFV+IA+QGSL++AA+QLNYS+AMVSRYLDHLE +SVRLFQRNTRKISLTP
Sbjct 1 MDTIKAIQVFVSIAEQGSLSRAAEQLNYSRAMVSRYLDHLEQTFSVRLFQRNTRKISLTP 60
Query 72 YGEKALHYCENILQQHNLLHDLAAHEQQSGVIRLTCGLFLYQLGLNRCLRAFKTEYPEIQ 131
GEKAL YCENILQQ +LL DLAAHEQQ+G IRLTCGLFLYQ+GLN CLRAFK ++P++Q
Sbjct 61 AGEKALRYCENILQQQSLLFDLAAHEQQTGTIRLTCGLFLYQMGLNECLRAFKQQHPQVQ 120
Query 132 FDLSLTENALDLIDGNIDLALRITQKVADGLIARPIFDIASTFCAHPDYLAQYPTLSHPS 191
F++ LTEN +DLID +DLALRITQKVADGLIARP+++I S FCAHPDYLAQ+P L HPS
Sbjct 121 FEIILTENTVDLIDSQVDLALRITQKVADGLIARPVYNIESIFCAHPDYLAQHPPLLHPS 180
Query 192 QLMQHQCITHQSHSQYWTMTDNEQQPQNYPINSSFKSNDVNALYDMCLHAQGIAMLPTLM 251
QL+Q+ CITH SQYWT+ + QQPQNYP+NS FKSNDVNALYDMC++AQGIAMLPT +
Sbjct 181 QLLQYDCITHHHASQYWTLFNAAQQPQNYPLNSIFKSNDVNALYDMCINAQGIAMLPTRL 240
Query 252 VKDDLAAGRLIRILPDFSAVDLPLSLVYASREHLPQMTQLLIAFLIEHLGNDLN 305
V++DL G+LI++L DFSA DL LSLVY SR+HLP+M Q IAFLIEHL LN
Sbjct 241 VQNDLIRGQLIQVLADFSASDLTLSLVYVSRQHLPRMIQQFIAFLIEHLDFYLN 294
>A0A3D2SN82 LysR family transcriptional regulator [Acinetobacter
ursingii]
Length=304
Score = 447 bits (1150), Expect = 5e-163
Identities = 220/302 (73%), Positives = 260/302 (86%), Gaps = 1/302 (0%)
Query 4 LQQFQITIMDTLKAIQVFVTIAQQGSLTKAADQLNYSKAMVSRYLDHLEHVYSVRLFQRN 63
+QQ + +MDT+KA+QVFV IA+QGSL++AA+QLNYS+AMVSRYLDHLE +SVRLFQRN
Sbjct 1 MQQSDV-MMDTIKAMQVFVRIAEQGSLSRAAEQLNYSRAMVSRYLDHLEQTFSVRLFQRN 59
Query 64 TRKISLTPYGEKALHYCENILQQHNLLHDLAAHEQQSGVIRLTCGLFLYQLGLNRCLRAF 123
TRKISLTP GEKAL YCENILQQ LL +LAAHEQQ+G IRLTCGLFLYQ+GLN CLRAF
Sbjct 60 TRKISLTPAGEKALLYCENILQQQALLFELAAHEQQTGTIRLTCGLFLYQMGLNECLRAF 119
Query 124 KTEYPEIQFDLSLTENALDLIDGNIDLALRITQKVADGLIARPIFDIASTFCAHPDYLAQ 183
K ++P IQF++ LTEN +DLID +DLALRITQKVADGLIARP+ +I S FCAHPDYLAQ
Sbjct 120 KRQHPHIQFEVILTENTVDLIDHQMDLALRITQKVADGLIARPVHEIKSIFCAHPDYLAQ 179
Query 184 YPTLSHPSQLMQHQCITHQSHSQYWTMTDNEQQPQNYPINSSFKSNDVNALYDMCLHAQG 243
+P LSHPSQL+Q+ CITHQ SQYWT+ + EQQPQNYP+NS+FKSNDVNALYDMC++AQG
Sbjct 180 HPQLSHPSQLLQYDCITHQHASQYWTLFNVEQQPQNYPLNSTFKSNDVNALYDMCINAQG 239
Query 244 IAMLPTLMVKDDLAAGRLIRILPDFSAVDLPLSLVYASREHLPQMTQLLIAFLIEHLGND 303
+AMLP +V++DL GRLI++L DFSA DL LSLVY SR+HLP++ Q IAFLIEHL
Sbjct 240 VAMLPARLVQNDLIRGRLIQVLADFSAPDLTLSLVYVSRQHLPRIIQQFIAFLIEHLDFY 299
Query 304 LN 305
LN
Sbjct 300 LN 301
>A0A427PRY8 LysR family transcriptional regulator [Acinetobacter
sp. FDAARGOS_515]
Length=304
Score = 446 bits (1147), Expect = 1e-162
Identities = 221/302 (73%), Positives = 260/302 (86%), Gaps = 1/302 (0%)
Query 4 LQQFQITIMDTLKAIQVFVTIAQQGSLTKAADQLNYSKAMVSRYLDHLEHVYSVRLFQRN 63
+QQ + +MDT+KA+QVFV IA+QGSL++AA+QLNYS+AMVSRYLDHLE +SVRLFQRN
Sbjct 1 MQQSDV-MMDTIKAMQVFVRIAEQGSLSRAAEQLNYSRAMVSRYLDHLEQTFSVRLFQRN 59
Query 64 TRKISLTPYGEKALHYCENILQQHNLLHDLAAHEQQSGVIRLTCGLFLYQLGLNRCLRAF 123
TRKISLTP GEKAL YCENILQQ LL +LAAHEQQ+G IRLTCGLFLYQ+GLN CLRAF
Sbjct 60 TRKISLTPAGEKALLYCENILQQQALLFELAAHEQQTGTIRLTCGLFLYQMGLNACLRAF 119
Query 124 KTEYPEIQFDLSLTENALDLIDGNIDLALRITQKVADGLIARPIFDIASTFCAHPDYLAQ 183
K ++P IQF++ LTEN +DLID +DLALRITQKVADGLIARP+ +I S FCAHPDYLAQ
Sbjct 120 KRQHPHIQFEVILTENTVDLIDHQMDLALRITQKVADGLIARPVHEIKSIFCAHPDYLAQ 179
Query 184 YPTLSHPSQLMQHQCITHQSHSQYWTMTDNEQQPQNYPINSSFKSNDVNALYDMCLHAQG 243
+ LSHPSQL+Q+ CITHQ SQYWT+ + EQQPQNYP+NS+FKSNDVNALYDMC++AQG
Sbjct 180 HSQLSHPSQLLQYDCITHQHASQYWTLFNVEQQPQNYPLNSTFKSNDVNALYDMCINAQG 239
Query 244 IAMLPTLMVKDDLAAGRLIRILPDFSAVDLPLSLVYASREHLPQMTQLLIAFLIEHLGND 303
IAMLPT +V++DL GRLI++L DFSA DL LSLVY SR+HLP++ Q IAFLIEHL
Sbjct 240 IAMLPTRLVQNDLIRGRLIQVLADFSAPDLTLSLVYVSRQHLPRIIQQFIAFLIEHLDFY 299
Query 304 LN 305
LN
Sbjct 300 LN 301
>A0A7T9Z7J7 LysR family transcriptional regulator [Acinetobacter
ursingii]
Length=304
Score = 445 bits (1145), Expect = 3e-162
Identities = 220/302 (73%), Positives = 259/302 (86%), Gaps = 1/302 (0%)
Query 4 LQQFQITIMDTLKAIQVFVTIAQQGSLTKAADQLNYSKAMVSRYLDHLEHVYSVRLFQRN 63
+QQ + +MDT+KA+QVFV IA+QGSL++AA+QLNYS+AMVSRYLDHLE +SVRLFQRN
Sbjct 1 MQQSDV-MMDTIKAMQVFVRIAEQGSLSRAAEQLNYSRAMVSRYLDHLEQTFSVRLFQRN 59
Query 64 TRKISLTPYGEKALHYCENILQQHNLLHDLAAHEQQSGVIRLTCGLFLYQLGLNRCLRAF 123
TRKISLTP GEKAL YCENILQQ LL +LAAHEQQ+G IRLTCGLFLYQ+GLN CLRAF
Sbjct 60 TRKISLTPAGEKALLYCENILQQQALLFELAAHEQQTGTIRLTCGLFLYQMGLNECLRAF 119
Query 124 KTEYPEIQFDLSLTENALDLIDGNIDLALRITQKVADGLIARPIFDIASTFCAHPDYLAQ 183
K ++P IQF++ LTEN +DLID +DLALRITQKVADGLIARP+ +I S FCAHPDYLAQ
Sbjct 120 KRQHPHIQFEVILTENTVDLIDHQMDLALRITQKVADGLIARPVHEIKSIFCAHPDYLAQ 179
Query 184 YPTLSHPSQLMQHQCITHQSHSQYWTMTDNEQQPQNYPINSSFKSNDVNALYDMCLHAQG 243
+P L HPSQL+Q+ CITHQ SQYWT+ + EQQPQNYP+NS+FKSNDVNALYDMC++AQG
Sbjct 180 HPPLLHPSQLLQYDCITHQHASQYWTLFNVEQQPQNYPLNSTFKSNDVNALYDMCINAQG 239
Query 244 IAMLPTLMVKDDLAAGRLIRILPDFSAVDLPLSLVYASREHLPQMTQLLIAFLIEHLGND 303
IAMLP +V++DL GRLI++L DFSA DL LSLVY SR+HLP++ Q IAFLIEHL
Sbjct 240 IAMLPARLVQNDLIRGRLIQVLADFSAPDLTLSLVYVSRQHLPRIIQQFIAFLIEHLDFY 299
Query 304 LN 305
LN
Sbjct 300 LN 301
>A0A009ZJY4 Bacterial regulatory helix-turn-helix, lysR family
protein [Acinetobacter sp. 479375]
Length=297
Score = 444 bits (1143), Expect = 4e-162
Identities = 218/294 (74%), Positives = 254/294 (86%), Gaps = 0/294 (0%)
Query 12 MDTLKAIQVFVTIAQQGSLTKAADQLNYSKAMVSRYLDHLEHVYSVRLFQRNTRKISLTP 71
MDT+KA+QVFV IA+QGSL++AA+QLNYS+AMVSRYLDHLE +SVRLFQRNTRKISLTP
Sbjct 1 MDTIKAMQVFVRIAEQGSLSRAAEQLNYSRAMVSRYLDHLEQTFSVRLFQRNTRKISLTP 60
Query 72 YGEKALHYCENILQQHNLLHDLAAHEQQSGVIRLTCGLFLYQLGLNRCLRAFKTEYPEIQ 131
GEKAL YCENILQQ LL +LAAHEQQ+G IRLTCGLFLYQ+GLN CLRAFK ++P IQ
Sbjct 61 AGEKALLYCENILQQQALLFELAAHEQQTGTIRLTCGLFLYQMGLNECLRAFKRQHPHIQ 120
Query 132 FDLSLTENALDLIDGNIDLALRITQKVADGLIARPIFDIASTFCAHPDYLAQYPTLSHPS 191
F++ LTEN +DLID +DLALRITQKVADGLIARP+ +I S FCAHPDYLAQ+P L HPS
Sbjct 121 FEVILTENTVDLIDHQMDLALRITQKVADGLIARPVHEIKSIFCAHPDYLAQHPPLLHPS 180
Query 192 QLMQHQCITHQSHSQYWTMTDNEQQPQNYPINSSFKSNDVNALYDMCLHAQGIAMLPTLM 251
QL+Q+ CITHQ SQYWT+ + EQQPQNYP+NS+FKSNDVNALYDMC++AQGIAMLP +
Sbjct 181 QLLQYDCITHQHASQYWTLFNVEQQPQNYPLNSTFKSNDVNALYDMCINAQGIAMLPARL 240
Query 252 VKDDLAAGRLIRILPDFSAVDLPLSLVYASREHLPQMTQLLIAFLIEHLGNDLN 305
V++DL GRLI++L DFSA DL LSLVY SR+HLP++ Q IAFLIEHL LN
Sbjct 241 VQNDLIRGRLIQVLADFSAPDLTLSLVYVSRQHLPRIIQQFIAFLIEHLDFYLN 294
>B8Y3J9 LysR [Actinobacillus pleuropneumoniae]
Length=297
Score = 161 bits (408), Expect = 5e-51
Identities = 93/290 (32%), Positives = 153/290 (53%), Gaps = 4/290 (1%)
Query 12 MDTLKAIQVFVTIAQQGSLTKAADQLNYSKAMVSRYLDHLEHVYSVRLFQRNTRKISLTP 71
MD + AIQVF+ +A+ GS T A++L+ S+ V+R + +E ++ RL QR TR +SLT
Sbjct 1 MDRITAIQVFLMVAETGSFTATAERLDLSRPKVTRAVALMEEWFNARLLQRTTRHVSLTD 60
Query 72 YGEKALHYCENILQQHNLLHD--LAAHEQQSGVIRLTCGLFLYQLGLNRCLRAFKTEYPE 129
GE+A+ YC+ + + + + L + G +++ L +R F ++P+
Sbjct 61 AGEQAVEYCKKMTELTSAIEQDFLTKRGELRGSLKIASNAAFGGTHLLNAIRTFLAKHPK 120
Query 130 IQFDLSLTENALDLIDGNIDLALRITQKVADGLIARPIFDIASTFCAHPDYLAQYPTLSH 189
+ L L +N ++L++ IDLA+R T ++ARP+F S A P YLAQ+ T+
Sbjct 121 LNIQLILADNTVNLVEEGIDLAVRFTNNPDPNVVARPLFTCHSLLVATPAYLAQHGTIHS 180
Query 190 PSQLMQHQCITHQS-HSQYWTMTDNEQQPQNYPINSSFKSNDVNALYDMCLHAQGIAMLP 248
P +L H+ + H + + + WT + Q+ + S ND AL + L GIAMLP
Sbjct 181 PQELANHRYLAHANVNRKEWTFIKDGQETV-LELTSQLTINDTGALLNFTLADGGIAMLP 239
Query 249 TLMVKDDLAAGRLIRILPDFSAVDLPLSLVYASREHLPQMTQLLIAFLIE 298
++ L +L +LPD+ + VY SR LPQ + + FL+E
Sbjct 240 KYFIEQQLKNNQLQIVLPDWQMPTYQVYAVYPSRRKLPQTVRSFVDFLVE 289
>B4XH96 LysR [Actinobacillus pleuropneumoniae]
Length=297
Score = 158 bits (399), Expect = 1e-49
Identities = 92/290 (32%), Positives = 149/290 (51%), Gaps = 4/290 (1%)
Query 12 MDTLKAIQVFVTIAQQGSLTKAADQLNYSKAMVSRYLDHLEHVYSVRLFQRNTRKISLTP 71
MD + AIQVF+ +A+ GS T A++L+ S+ V+R + +E ++ RL QR TR +SLT
Sbjct 1 MDRITAIQVFLMVAETGSFTATAERLDLSRPKVTRAVALMEEWFNARLLQRTTRHVSLTD 60
Query 72 YGEKALHYCENILQQHNLLHD--LAAHEQQSGVIRLTCGLFLYQLGLNRCLRAFKTEYPE 129
GE+A+ YC+ + + + + L + G +R+ L +R F ++P+
Sbjct 61 AGEQAVEYCKKMTELTSAIEQDFLTQRGELRGSLRIASNAAFGSTHLLNAIRTFLAKHPK 120
Query 130 IQFDLSLTENALDLIDGNIDLALRITQKVADGLIARPIFDIASTFCAHPDYLAQYPTLSH 189
+ L L +N ++L++ IDLA+R T +ARP+F S A P YL Q+ T+
Sbjct 121 LNIQLILADNTVNLVEEGIDLAVRFTNNPDPNAVARPLFTCHSLLVATPAYLTQHGTIHS 180
Query 190 PSQLMQHQCITHQS-HSQYWTMTDNEQQPQNYPINSSFKSNDVNALYDMCLHAQGIAMLP 248
P +L H+ + H + + + WT Q+ + S ND AL + L GIAMLP
Sbjct 181 PQELANHRYLAHANVNRKEWTFIKGGQETV-LELTSQLTINDTGALLNFTLADGGIAMLP 239
Query 249 TLMVKDDLAAGRLIRILPDFSAVDLPLSLVYASREHLPQMTQLLIAFLIE 298
++ L +L +LPD+ + VY SR L Q + + FL+E
Sbjct 240 KYFIEQQLKNNQLQIVLPDWQMPTYQVYAVYPSRRQLSQAVRSFVDFLVE 289
>D2XDF4 Putative regulator [Pseudomonas sp. NyZ402]
Length=309
Score = 146 bits (368), Expect = 6e-45
Identities = 87/298 (29%), Positives = 149/298 (50%), Gaps = 9/298 (3%)
Query 12 MDTLKAIQVFVTIAQQGSLTKAADQLNYSKAMVSRYLDHLEHVYSVRLFQRNTRKISLTP 71
MD L +++ FV +A+ G+ KAA QL +++++S + LE + LF R+TR + L+
Sbjct 1 MDRLLSVEAFVRVAETGNFAKAALQLGVTRSVISHRIQQLEQFINAPLFHRSTRHVRLSD 60
Query 72 YGEKALHYCENILQQHNLL--HDLAAHEQQSGVIRLTC--GLFLYQLGLNRCLRAFKTEY 127
GE C +++ N L H + +G +R+ G + G R + F Y
Sbjct 61 VGETYYKECSDMVANFNSLTEHMRELRAKPTGKLRIQMLPGFAIGHFG--RMMAEFNHLY 118
Query 128 PEIQFDLSLTENALDLIDGNIDLALRITQKVADGLIARPIFDIASTFCAHPDYLAQYPTL 187
P+I+ D+ + + +D I+ D+A ++ +++ LI R +F + FC P Y A++
Sbjct 119 PDIEIDVVVNDRVVDPIEEGFDVAFQMFPPLSETLIERKLFSVRRLFCMSPQYAAKFGVP 178
Query 188 SHPSQLMQHQCITHQSHSQY--WTMTDNEQQPQNYPINSSFKSNDVNALYDMCLHAQGIA 245
HP+ L+ H+ + + W T +E + N + +SN V+ L D I
Sbjct 179 QHPNDLLNHKIAMYAGYPSRNRWVFT-HEGEQLNLSLPGQMRSNSVHLLRDYAETGVCIV 237
Query 246 MLPTLMVKDDLAAGRLIRILPDFSAVDLPLSLVYASREHLPQMTQLLIAFLIEHLGND 303
LPTL+ DDL AGRLI +LP ++ S V+ + + + LI FL+E GN+
Sbjct 238 CLPTLVASDDLLAGRLIPVLPKYTLSSFNFSAVFPATQRRALKVRTLIEFLVERFGNE 295
>C6FI39 PnpR [Pseudomonas putida]
Length=309
Score = 146 bits (368), Expect = 6e-45
Identities = 87/298 (29%), Positives = 147/298 (49%), Gaps = 9/298 (3%)
Query 12 MDTLKAIQVFVTIAQQGSLTKAADQLNYSKAMVSRYLDHLEHVYSVRLFQRNTRKISLTP 71
MD L +++ FV +A+ G+ KAA QL +++++S + LE + LF R+TR + L+
Sbjct 1 MDRLLSVEAFVRVAETGNFAKAALQLGVTRSVISHRIQQLEQFINAPLFHRSTRHVRLSD 60
Query 72 YGEKALHYCENILQQHNLL--HDLAAHEQQSGVIRLTC--GLFLYQLGLNRCLRAFKTEY 127
GE C +++ N L H + +G +R+ G + G R + F Y
Sbjct 61 VGETYYKECSDMVANFNSLTEHMRELRSKPTGKLRIQMLPGFAIGHFG--RMMAEFNRLY 118
Query 128 PEIQFDLSLTENALDLIDGNIDLALRITQKVADGLIARPIFDIASTFCAHPDYLAQYPTL 187
P+I+ D+ + + +D I+ D+A ++ +++ LI R +F + FC P Y A++
Sbjct 119 PDIEIDVVVNDRVVDPIEEGFDVAFQMFPPLSETLIERKLFSVRRLFCMSPQYAAEFGVP 178
Query 188 SHPSQLMQHQCITHQSH--SQYWTMTDNEQQPQNYPINSSFKSNDVNALYDMCLHAQGIA 245
HP L+ H+ + + W T +Q N + +SN V+ L D I
Sbjct 179 QHPDDLLNHKIAMYAGYPSRNRWVFTHGGEQ-LNLSLPGHMRSNSVHLLRDYAETGVCIV 237
Query 246 MLPTLMVKDDLAAGRLIRILPDFSAVDLPLSLVYASREHLPQMTQLLIAFLIEHLGND 303
LPTL+ DDL AGRLI +LP++S S V+ + + + LI FL+E G +
Sbjct 238 CLPTLVASDDLLAGRLIPVLPEYSLSSFNFSAVFPATQRRALKVRALIEFLVERFGEE 295
>T2D2H8 Putative LysR family transcriptional regulator [mixed
culture bacterium NP30]
Length=298
Score = 145 bits (366), Expect = 9e-45
Identities = 96/301 (32%), Positives = 153/301 (51%), Gaps = 21/301 (7%)
Query 12 MDTLKAIQVFVTIAQQGSLTKAADQLNYSKAMVSRYLDHLEHVYSVRLFQRNTRKISLTP 71
MD + +Q F + GS KAAD L+ SK VSRY+ LE VRL R TR++SLT
Sbjct 1 MDRFQEMQTFCAVVDAGSFVKAADALHMSKPAVSRYVADLEARLGVRLLHRTTRRLSLTE 60
Query 72 YGEKALHYCENILQQHNLLHDLAAHEQQSGVIRLTCGLFLYQLGLNRCLR-------AFK 124
G C +L L A +SG R GL + ++ ++ AF
Sbjct 61 EGAVFNTRCRELLS--GLEEAEAEVSSRSGAAR---GLLRVNVPVSFGIQTLAPLWDAFH 115
Query 125 TEYPEIQFDLSLTENALDLIDGNIDLALRITQKVADGLIARPIFDIASTFCAHPDYLAQY 184
+P+++ ++ L++ +D+++ DLA+RI + LI++ + CA P+YL +Y
Sbjct 116 ELHPQVRLNVELSDRVVDVVEEGYDLAIRIATLSSSSLISKRLARTRIVLCASPEYLNKY 175
Query 185 PTLSHPSQLMQHQCITHQSHSQYWTMTD-----NEQQPQNYPINSSFKSNDVNALYDMCL 239
S+P+ L +H+ I + YW D + P N I+ +N+ + + L
Sbjct 176 GEPSNPANLAEHKVIGYS----YWLDADAWEFEGPEGPVNVKIHPWMFTNNGDTCRAVAL 231
Query 240 HAQGIAMLPTLMVKDDLAAGRLIRILPDFSAVDLPLSLVYASREHLPQMTQLLIAFLIEH 299
QGI + PT +V DDLAAGRL+ ILP + +++L + VY +R+H+ + L+ FL E
Sbjct 232 AHQGIILQPTFLVGDDLAAGRLVEILPQYRSIELGIYAVYPTRKHVAPKVRALVNFLEEK 291
Query 300 L 300
L
Sbjct 292 L 292
>Q9JPU9 HTH-type transcriptional regulator CrgA [Neisseria meningitidis
serogroup C (strain 8013)]
Length=299
Score = 142 bits (359), Expect = 1e-43
Identities = 95/292 (33%), Positives = 147/292 (50%), Gaps = 7/292 (2%)
Query 18 IQVFVTIAQQGSLTKAADQLNYSKAMVSRYLDHLEHVYSVRLFQRNTRKISLTPYGEKAL 77
+ VFV + + GS ++AA+QL + + VSR + LE V L R TR++SLT G +
Sbjct 8 LTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEKLGVNLLNRTTRQLSLTEEGAQYF 67
Query 78 HYCENILQQHNLLHD--LAAHEQQSGVIRLTCGLFLYQLGLNRCLRAFKTEYPEIQFDLS 135
+ ILQ+ LA HE GV+R+ + + L F YP I+ L
Sbjct 68 RRAQRILQEMAAAETEMLAVHEIPQGVLRVDSAMPMVLHLLAPLATKFNERYPHIRLSLV 127
Query 136 LTENALDLIDGNIDLALRITQKVADGLIARPIFDIASTFCAHPDYLAQYPTLSHPSQLMQ 195
+E ++LI+ +D+ALR + GL AR +FD A P+YLA++ T +L
Sbjct 128 SSEGYINLIERKVDIALRAGELDDSGLRARHLFDSRFRVIASPEYLAKHGTPQSAEELAG 187
Query 196 HQCI--THQSHSQYWTMTDNEQQPQNYPINSSFKSNDVNALYDMCLHAQGIAMLPTLMVK 253
HQC+ T W + D + P Y I+ F ++ L +CL GIA L +V
Sbjct 188 HQCLGFTEPGSLNTWAVLDAQGNP--YKISPHFTASSGEILRSLCLSGCGIACLSDFLVD 245
Query 254 DDLAAGRLIRILPD-FSAVDLPLSLVYASREHLPQMTQLLIAFLIEHLGNDL 304
+D+A G+LI +L + S P + VY S + + ++ + FL+E LGN+L
Sbjct 246 NDIAEGKLIPLLAEQTSDKTHPFNAVYYSDKAVNLRLRVFLDFLVEELGNNL 297
>B6RAT8 PtrA [Pseudomonas chlororaphis]
Length=301
Score = 142 bits (358), Expect = 1e-43
Identities = 99/292 (34%), Positives = 143/292 (49%), Gaps = 10/292 (3%)
Query 12 MDTLKAIQVFVTIAQQGSLTKAADQLNYSKAMVSRYLDHLEHVYSVRLFQRNTRKISLTP 71
MD L A F + + GS T AA QL SK +S+ + LE +SV L QR TR++SLT
Sbjct 1 MDDLAA---FAVLIEAGSFTLAAQQLGCSKGQLSKRISALEAQFSVVLLQRTTRRLSLTA 57
Query 72 YGEKALHYCENILQQHNLLHDLAAH--EQQSGVIRLTCGLFLYQLGLNRCLRAFKTEYPE 129
G L + +L Q A + +G +RLT + L + L F +YPE
Sbjct 58 AGAALLPQAQALLVQVERARQALARLKDDMAGPVRLTVPVSLGETFFEGLLLEFSRQYPE 117
Query 130 IQFDLSLTENALDLIDGNIDLALRITQKVADGLIARPIFDIASTFCAHPDYLAQYPTLSH 189
+Q +L L N DL DLA+R L+ARP+ CA P YL QY
Sbjct 118 VQIELELNNNYRDLTRDGFDLAIRSEVANDQRLVARPLLAWHEMTCASPAYLEQYGEPQT 177
Query 190 PSQLMQHQCI--THQSHSQYWTMTDNEQQPQNYPINSSFKSNDVNALYDMCLHAQGIAML 247
P L +H+C+ +H S + W + + + ++ F SN N L L GIA L
Sbjct 178 PRDLAEHRCLLNSHYSGREEW-LYHQQHELLRVRVSGPFASNHYNLLKKAALVGAGIARL 236
Query 248 PTLMVKDDLAAGRLIRILPDFSAVDLPLSLV--YASREHLPQMTQLLIAFLI 297
P+ +++ +LA GRL +L D+ +P+ LV Y + LP+ TQ+L +LI
Sbjct 237 PSYLLQAELADGRLRGLLRDYQTRSMPMYLVHPYQYQGGLPRRTQVLADYLI 288
>Q9JXW7 HTH-type transcriptional regulator CrgA [Neisseria meningitidis
serogroup B (strain MC58)]
Length=299
Score = 139 bits (349), Expect = 3e-42
Identities = 93/292 (32%), Positives = 145/292 (50%), Gaps = 7/292 (2%)
Query 18 IQVFVTIAQQGSLTKAADQLNYSKAMVSRYLDHLEHVYSVRLFQRNTRKISLTPYGEKAL 77
+ VFV + + GS ++AA+QL + + VSR + LE V L R TR++SLT G +
Sbjct 8 LTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEKLGVNLLNRTTRQLSLTEEGAQYF 67
Query 78 HYCENILQQHNLLHD--LAAHEQQSGVIRLTCGLFLYQLGLNRCLRAFKTEYPEIQFDLS 135
+ ILQ+ LA HE GV+ + + + L F YP I+ L
Sbjct 68 RRAQRILQEMAAAETEMLAVHEIPQGVLSVDSAMPMVLHLLAPLAAKFNERYPHIRLSLV 127
Query 136 LTENALDLIDGNIDLALRITQKVADGLIARPIFDIASTFCAHPDYLAQYPTLSHPSQLMQ 195
+E ++LI+ +D+ALR + GL AR +FD A P+YLA++ T +L
Sbjct 128 SSEGYINLIERKVDIALRAGELDDSGLRARHLFDSRFRVIASPEYLAKHGTPQSTEELAG 187
Query 196 HQCI--THQSHSQYWTMTDNEQQPQNYPINSSFKSNDVNALYDMCLHAQGIAMLPTLMVK 253
HQC+ T W + D + P Y I+ F ++ L +CL GI L +V
Sbjct 188 HQCLGFTEPGSLNTWAVLDAQGNP--YKISPHFTASSGEILRSLCLSGCGIVCLSDFLVD 245
Query 254 DDLAAGRLIRILPD-FSAVDLPLSLVYASREHLPQMTQLLIAFLIEHLGNDL 304
+D+A G+LI +L + S P + VY S + + ++ + FL+E LGN+L
Sbjct 246 NDIAEGKLIPLLAEQTSDKTHPFNAVYYSDKAVNLRLRVFLDFLVEELGNNL 297
>Q93UN6 LysR family transcriptional regulator [Vibrio vulnificus]
Length=300
Score = 137 bits (346), Expect = 8e-42
Identities = 87/289 (30%), Positives = 144/289 (50%), Gaps = 4/289 (1%)
Query 12 MDTLKAIQVFVTIAQQGSLTKAADQLNYSKAMVSRYLDHLEHVYSVRLFQRNTRKISLTP 71
MD L AI+ F+ +A S T+AA+ L+ S+ V+R++ +E RL R TRK+SLT
Sbjct 1 MDRLDAIKSFIEVANCRSFTQAAETLSLSRLQVTRHVQEVESWLQQRLLHRTTRKVSLTH 60
Query 72 YGEKALHYCENILQQHNLLHDLAAHEQQS--GVIRLTCGLFLYQLGLNRCLRAFKTEYPE 129
GE+A C+ IL + L A + S G IR++ + Q L + AF +P
Sbjct 61 AGEQAYIRCQRILDEAAALELDAVQSRDSLTGSIRISAPIGFSQHHLIDAVSAFTELHPL 120
Query 130 IQFDLSLTENALDLIDGNIDLALRITQKVADGLIARPIFDIASTFCAHPDYLAQYPTLSH 189
+ D+ ++ L+D +D+ALR T + + LIAR + DI + CA YL ++ +
Sbjct 121 VMVDILASDRFSQLVDERVDVALRYTDQPDETLIARKLMDIDAVVCATQGYLDEHEPIVV 180
Query 190 PSQLMQHQCITHQSHSQYWTMTDNEQQPQNYPINSSFKSNDVNALYDMCLHAQGIAMLPT 249
P L H C+ H S + + DN Q + + ++ND++ L L +G+ LP
Sbjct 181 PEDLANHNCLVHLSTHLWRFVADN--QISEVSVKGNIRANDLSTLLGAALAGKGVIRLPC 238
Query 250 LMVKDDLAAGRLIRILPDFSAVDLPLSLVYASREHLPQMTQLLIAFLIE 298
+ L G+L+ +L ++ L VY SR + + + I F+ +
Sbjct 239 DLANPLLQQGKLVALLTPYTLPSSSLWAVYLSRSYQTPVVRQFIDFIAQ 287
>B1GRM5 LysR family regulatory protein [Pseudomonas fluorescens]
Length=310
Score = 137 bits (346), Expect = 1e-41
Identities = 85/296 (29%), Positives = 145/296 (49%), Gaps = 9/296 (3%)
Query 12 MDTLKAIQVFVTIAQQGSLTKAADQLNYSKAMVSRYLDHLEHVYSVRLFQRNTRKISLTP 71
MD L + FV +AQ GS KAA+QL ++++++ + LE + LF R+TR + L+
Sbjct 1 MDRLLITEAFVRVAQTGSFAKAAEQLGVTRSVITHRVQQLETFINSPLFHRSTRHVRLSD 60
Query 72 YGEKALHYCENILQQHNLLHDLAAHEQQS--GVIRLTC--GLFLYQLGLNRCLRAFKTEY 127
GE C +++ + L + H++ + G +R+ G + LG L F +
Sbjct 61 IGEAYFQECADMVAGFHGLTEKMRHQRSNLTGQLRVQVLQGFAVDHLG--PMLAKFTALH 118
Query 128 PEIQFDLSLTENALDLIDGNIDLALRITQKVADGLIARPIFDIASTFCAHPDYLAQYPTL 187
PEI+FD+ + + +D I+ D+A ++ +A+ L+ R +F + FCA P YL +
Sbjct 119 PEIEFDVVVNDRVVDPIEEGFDIAFQMFPPLAERLVVRKLFSVHRVFCASPQYLEERGAP 178
Query 188 SHPSQLMQHQCITHQSH--SQYWTMTDNEQQPQNYPINSSFKSNDVNALYDMCLHAQGIA 245
HP L H + W E + + ++ +S+ ++ L D L GI
Sbjct 179 EHPQHLKDHHMALFGGYPSRNRWQFVRGE-ECIDLTLHGQVRSSSIHLLRDYALSGAGIT 237
Query 246 MLPTLMVKDDLAAGRLIRILPDFSAVDLPLSLVYASREHLPQMTQLLIAFLIEHLG 301
LPTL+ ++L GRL+ IL D+ + VY + + LI FLI+H+G
Sbjct 238 CLPTLVASNELITGRLVPILTDYRLSSFDFAAVYPETQRRALRVRTLIDFLIDHIG 293
>A0A2S9PBS7 Putative transcriptional regulator [Yersinia pestis]
Length=303
Score = 132 bits (332), Expect = 1e-39
Identities = 92/284 (32%), Positives = 150/284 (53%), Gaps = 10/284 (4%)
Query 13 DTLKAIQVFVTIAQQGSLTKAADQLNYSKAMVSRYLDHLEHVYSVRLFQRNTRKISLTPY 72
D L I FVT AQQGS T AA++L +K+ V + + LE ++LFQR+TR++SLTP
Sbjct 5 DHLGGITAFVTTAQQGSFTAAAEKLGLTKSAVGKSVSRLEDRLGLKLFQRSTRRLSLTPD 64
Query 73 GEKALHYCE---NILQQHNLLHDLAAHE-QQSGVIRLTCGLFLYQLGLNRCLRAFKTEYP 128
GE+ L C+ +IL+Q +L +H Q SG +R+ + + L YP
Sbjct 65 GERFLASCQSAIDILEQAEA--ELMSHICQPSGRLRVDLPAAFGRQRILPILLDIIRLYP 122
Query 129 EIQFDLSLTENALDLIDGNIDLALRITQKV-ADGLIARPIFDIASTFCAHPDYLAQYPTL 187
E+ ++ +E +DLI+ IDL +RI + + GL+AR + CA PDYL +
Sbjct 123 ELALTVTFSERFVDLIEEGIDLVIRIGELADSSGLVARRLTTQKLVICASPDYLLYHGEP 182
Query 188 SHPSQLMQHQCITHQSHSQ--YWTMTDNEQQPQNYPINSSFKSNDVNALYDMCLHAQGIA 245
+L QHQC+ SQ W + +++ Q + + + D +A+ L G++
Sbjct 183 VSTDELSQHQCVVGFRRSQPISWLLKESDGQISRFAPPPTHEFGDGDAMLAATLAGGGLS 242
Query 246 MLPTLMVKDDLAAGRLIRILPDFSAVDLPLSLVY-ASREHLPQM 288
LP +V L +G L +LP S ++P+S ++ +R+ LP++
Sbjct 243 QLPLWLVGKYLESGELREVLPGHSGGEMPISALWPKNRQLLPKI 286
Lambda K H a alpha
0.326 0.138 0.410 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1454553
Database: d4da9ecdb6e338d1ab9099ae42f6666a.TrEMBL.fasta
Posted date: May 20, 2024 10:30 PM
Number of letters in database: 6,629
Number of sequences in database: 22
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
