BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 3f961dc4d446f171afe760f4865d95ee.SwissProt.fasta
22 sequences; 8,191 total letters
Query= ACIAD3637
Length=320
Score E
Sequences producing significant alignments: (Bits) Value
Q6F6P9 Methionyl-tRNA formyltransferase [Acinetobacter baylyi (st... 636 0.0
B2I2H7 Methionyl-tRNA formyltransferase [Acinetobacter baumannii ... 514 0.0
B7GUZ7 Methionyl-tRNA formyltransferase [Acinetobacter baumannii ... 512 0.0
B0VAE0 Methionyl-tRNA formyltransferase [Acinetobacter baumannii ... 512 0.0
A3MAA1 Methionyl-tRNA formyltransferase [Acinetobacter baumannii ... 512 0.0
B7I2C3 Methionyl-tRNA formyltransferase [Acinetobacter baumannii ... 510 0.0
B0VQ12 Methionyl-tRNA formyltransferase [Acinetobacter baumannii ... 509 0.0
A8GKG6 Methionyl-tRNA formyltransferase [Serratia proteamaculans ... 338 2e-119
B5FCW7 Methionyl-tRNA formyltransferase [Aliivibrio fischeri (str... 331 7e-117
A7N122 Methionyl-tRNA formyltransferase [Vibrio campbellii (strai... 330 2e-116
Q0HPA7 Methionyl-tRNA formyltransferase [Shewanella sp. (strain M... 330 2e-116
A8FP74 Methionyl-tRNA formyltransferase [Shewanella sediminis (st... 330 2e-116
P23882 Methionyl-tRNA formyltransferase [Escherichia coli (strain... 313 9e-110
O85732 Methionyl-tRNA formyltransferase [Pseudomonas aeruginosa (... 310 1e-108
O87726 Methionyl-tRNA formyltransferase [Vibrio alginolyticus] 225 3e-76
P94463 Methionyl-tRNA formyltransferase [Bacillus subtilis (strai... 221 8e-74
O05101 Methionyl-tRNA formyltransferase [Clostridium acetobutylic... 217 4e-72
P50932 Methionyl-tRNA formyltransferase [Rickettsia prowazekii (s... 201 7e-66
P43523 Methionyl-tRNA formyltransferase [Thermus thermophilus] 165 4e-52
P77398 UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-gl... 99.8 2e-26
Q3SY69 Mitochondrial 10-formyltetrahydrofolate dehydrogenase [Hom... 94.0 3e-24
Q93PD8 UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-gl... 92.8 5e-24
>Q6F6P9 Methionyl-tRNA formyltransferase [Acinetobacter baylyi
(strain ATCC 33305 / BD413 / ADP1)]
Length=319
Score = 636 bits (1640), Expect = 0.0
Identities = 318/319 (99%), Positives = 319/319 (100%), Gaps = 0/319 (0%)
Query 1 VKIIFAGTPDFAATALDALIKTPHDIVAVYTQPDRKAGRGQKLTPSPVKQLALEHNLPVL 60
+KIIFAGTPDFAATALDALIKTPHDIVAVYTQPDRKAGRGQKLTPSPVKQLALEHNLPVL
Sbjct 1 MKIIFAGTPDFAATALDALIKTPHDIVAVYTQPDRKAGRGQKLTPSPVKQLALEHNLPVL 60
Query 61 QPLHFKSSTEEGLAAQAELAAFNADVMVVAAYGLILPQIVLDTPKYGCLNIHGSLLPRWR 120
QPLHFKSSTEEGLAAQAELAAFNADVMVVAAYGLILPQIVLDTPKYGCLNIHGSLLPRWR
Sbjct 61 QPLHFKSSTEEGLAAQAELAAFNADVMVVAAYGLILPQIVLDTPKYGCLNIHGSLLPRWR 120
Query 121 GAAPIQRAIAAGDAETGVTIMKMAAGLDTGDMMFKTYCPIEASDTSASLYEKLAAQGAEA 180
GAAPIQRAIAAGDAETGVTIMKMAAGLDTGDMMFKTYCPIEASDTSASLYEKLAAQGAEA
Sbjct 121 GAAPIQRAIAAGDAETGVTIMKMAAGLDTGDMMFKTYCPIEASDTSASLYEKLAAQGAEA 180
Query 181 ICTVLECEQQLQKFLAEREVQDENQTVYAHKLVKAEAQIDWTQDAIQIDRNIRAFNPWPV 240
ICTVLECEQQLQKFLAEREVQDENQTVYAHKLVKAEAQIDWTQDAIQIDRNIRAFNPWPV
Sbjct 181 ICTVLECEQQLQKFLAEREVQDENQTVYAHKLVKAEAQIDWTQDAIQIDRNIRAFNPWPV 240
Query 241 AFIPLDDKNNLRVWESTVSKLIAPDAEAGKIIAMDKHGIHVACGTGVVCLTALQWPGGKA 300
AFIPLDDKNNLRVWESTVSKLIAPDAEAGKIIAMDKHGIHVACGTGVVCLTALQWPGGKA
Sbjct 241 AFIPLDDKNNLRVWESTVSKLIAPDAEAGKIIAMDKHGIHVACGTGVVCLTALQWPGGKA 300
Query 301 LNPVQIIQTQKLNIGQVLA 319
LNPVQIIQTQKLNIGQVLA
Sbjct 301 LNPVQIIQTQKLNIGQVLA 319
>B2I2H7 Methionyl-tRNA formyltransferase [Acinetobacter baumannii
(strain ACICU)]
Length=320
Score = 514 bits (1324), Expect = 0.0
Identities = 250/319 (78%), Positives = 285/319 (89%), Gaps = 1/319 (0%)
Query 1 VKIIFAGTPDFAATALDALIKTPHDIVAVYTQPDRKAGRGQKLTPSPVKQLALEHNLPVL 60
+KIIFAGTP+FAATAL AL+KT H+I+AVYTQPDRKAGRGQKLTPSPVKQLALEHN+PV
Sbjct 1 MKIIFAGTPEFAATALAALLKTSHEIIAVYTQPDRKAGRGQKLTPSPVKQLALEHNIPVY 60
Query 61 QPLHFKSSTEEGLAAQAELAAFNADVMVVAAYGLILPQIVLDTPKYGCLNIHGSLLPRWR 120
QPLHFK+STEEGLAAQ ELAA ADVMVVAAYGLILPQ VLDTPKYGCLNIHGSLLPRWR
Sbjct 61 QPLHFKASTEEGLAAQQELAALGADVMVVAAYGLILPQAVLDTPKYGCLNIHGSLLPRWR 120
Query 121 GAAPIQRAIAAGDAETGVTIMKMAAGLDTGDMMFKTYCPIEASDTSASLYEKLAAQGAEA 180
GAAPIQRAIA GD ETG+TIM+MAAGLDTGDMM+KTYCPI + DTSA+L++KLAAQGA A
Sbjct 121 GAAPIQRAIATGDDETGITIMQMAAGLDTGDMMYKTYCPITSEDTSATLHDKLAAQGATA 180
Query 181 ICTVLECEQQLQKFLAEREVQDENQTVYAHKLVKAEAQIDWTQDAIQIDRNIRAFNPWPV 240
IC VLE E+ LQK+LAEREVQDE+ TVYAHKLVK+EA+IDW+ +A+Q+DRNIRAFNPWPV
Sbjct 181 ICAVLESEETLQKYLAEREVQDESLTVYAHKLVKSEARIDWSMNAVQVDRNIRAFNPWPV 240
Query 241 AFIPLDDKNNLRVWESTVSKLIAPDAEAGKIIAMDKHGIHVACGTGV-VCLTALQWPGGK 299
AFI LD+ N LRVW ST+S DA+AG+IIA+DK G+HVACG +CLT++QWPGGK
Sbjct 241 AFIQLDENNALRVWNSTISNQNKADAQAGEIIAIDKQGVHVACGENTFICLTSVQWPGGK 300
Query 300 ALNPVQIIQTQKLNIGQVL 318
ALN QI QTQKL++GQ+L
Sbjct 301 ALNAQQIAQTQKLHVGQIL 319
>B7GUZ7 Methionyl-tRNA formyltransferase [Acinetobacter baumannii
(strain AB307-0294)]
Length=320
Score = 512 bits (1319), Expect = 0.0
Identities = 249/319 (78%), Positives = 285/319 (89%), Gaps = 1/319 (0%)
Query 1 VKIIFAGTPDFAATALDALIKTPHDIVAVYTQPDRKAGRGQKLTPSPVKQLALEHNLPVL 60
+KIIFAGTP+FAATAL AL+KT H+I+AVYTQPDRKAGRGQKLTPSPVKQLALEHN+PV
Sbjct 1 MKIIFAGTPEFAATALAALLKTSHEIIAVYTQPDRKAGRGQKLTPSPVKQLALEHNIPVY 60
Query 61 QPLHFKSSTEEGLAAQAELAAFNADVMVVAAYGLILPQIVLDTPKYGCLNIHGSLLPRWR 120
QPLHFK+STEEGLAAQ ELAA ADVMVVAAYGLILPQ VLDTPKYGCLNIHGSLLPRWR
Sbjct 61 QPLHFKASTEEGLAAQQELAALGADVMVVAAYGLILPQAVLDTPKYGCLNIHGSLLPRWR 120
Query 121 GAAPIQRAIAAGDAETGVTIMKMAAGLDTGDMMFKTYCPIEASDTSASLYEKLAAQGAEA 180
GAAPIQRAIA GD ETG+TIM+MAAGLDTGDMM+KTYCPI + DTSA+L++KLAAQGA A
Sbjct 121 GAAPIQRAIATGDDETGITIMQMAAGLDTGDMMYKTYCPITSEDTSATLHDKLAAQGATA 180
Query 181 ICTVLECEQQLQKFLAEREVQDENQTVYAHKLVKAEAQIDWTQDAIQIDRNIRAFNPWPV 240
IC VLE E+ LQK+LAEREVQDE+ TVYAHKLVK+EA+IDW+ +A+Q+DRNIRAFNPWPV
Sbjct 181 ICAVLESEETLQKYLAEREVQDESLTVYAHKLVKSEARIDWSMNAVQVDRNIRAFNPWPV 240
Query 241 AFIPLDDKNNLRVWESTVSKLIAPDAEAGKIIAMDKHGIHVACGTGV-VCLTALQWPGGK 299
AFI LD+ N LRVW ST+S +A+AG+IIA+DK G+HVACG +CLT++QWPGGK
Sbjct 241 AFIQLDENNALRVWNSTISSQSKVNAQAGEIIAIDKQGVHVACGENTFICLTSVQWPGGK 300
Query 300 ALNPVQIIQTQKLNIGQVL 318
ALN QI QTQKL++GQ+L
Sbjct 301 ALNAQQIAQTQKLHVGQIL 319
>B0VAE0 Methionyl-tRNA formyltransferase [Acinetobacter baumannii
(strain AYE)]
Length=320
Score = 512 bits (1319), Expect = 0.0
Identities = 249/319 (78%), Positives = 285/319 (89%), Gaps = 1/319 (0%)
Query 1 VKIIFAGTPDFAATALDALIKTPHDIVAVYTQPDRKAGRGQKLTPSPVKQLALEHNLPVL 60
+KIIFAGTP+FAATAL AL+KT H+I+AVYTQPDRKAGRGQKLTPSPVKQLALEHN+PV
Sbjct 1 MKIIFAGTPEFAATALAALLKTSHEIIAVYTQPDRKAGRGQKLTPSPVKQLALEHNIPVY 60
Query 61 QPLHFKSSTEEGLAAQAELAAFNADVMVVAAYGLILPQIVLDTPKYGCLNIHGSLLPRWR 120
QPLHFK+STEEGLAAQ ELAA ADVMVVAAYGLILPQ VLDTPKYGCLNIHGSLLPRWR
Sbjct 61 QPLHFKASTEEGLAAQQELAALGADVMVVAAYGLILPQAVLDTPKYGCLNIHGSLLPRWR 120
Query 121 GAAPIQRAIAAGDAETGVTIMKMAAGLDTGDMMFKTYCPIEASDTSASLYEKLAAQGAEA 180
GAAPIQRAIA GD ETG+TIM+MAAGLDTGDMM+KTYCPI + DTSA+L++KLAAQGA A
Sbjct 121 GAAPIQRAIATGDDETGITIMQMAAGLDTGDMMYKTYCPITSEDTSATLHDKLAAQGATA 180
Query 181 ICTVLECEQQLQKFLAEREVQDENQTVYAHKLVKAEAQIDWTQDAIQIDRNIRAFNPWPV 240
IC VLE E+ LQK+LAEREVQDE+ TVYAHKLVK+EA+IDW+ +A+Q+DRNIRAFNPWPV
Sbjct 181 ICAVLESEETLQKYLAEREVQDESLTVYAHKLVKSEARIDWSMNAVQVDRNIRAFNPWPV 240
Query 241 AFIPLDDKNNLRVWESTVSKLIAPDAEAGKIIAMDKHGIHVACGTGV-VCLTALQWPGGK 299
AFI LD+ N LRVW ST+S +A+AG+IIA+DK G+HVACG +CLT++QWPGGK
Sbjct 241 AFIQLDENNALRVWNSTISSQSKVNAQAGEIIAIDKQGVHVACGENTFICLTSVQWPGGK 300
Query 300 ALNPVQIIQTQKLNIGQVL 318
ALN QI QTQKL++GQ+L
Sbjct 301 ALNAQQIAQTQKLHVGQIL 319
>A3MAA1 Methionyl-tRNA formyltransferase [Acinetobacter baumannii
(strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 /
5377)]
Length=320
Score = 512 bits (1319), Expect = 0.0
Identities = 249/319 (78%), Positives = 285/319 (89%), Gaps = 1/319 (0%)
Query 1 VKIIFAGTPDFAATALDALIKTPHDIVAVYTQPDRKAGRGQKLTPSPVKQLALEHNLPVL 60
+KIIFAGTP+FAATAL AL+KT H+I+AVYTQPDRKAGRGQKLTPSPVKQLALEHN+PV
Sbjct 1 MKIIFAGTPEFAATALAALLKTSHEIIAVYTQPDRKAGRGQKLTPSPVKQLALEHNIPVY 60
Query 61 QPLHFKSSTEEGLAAQAELAAFNADVMVVAAYGLILPQIVLDTPKYGCLNIHGSLLPRWR 120
QPLHFK+STEEGLAAQ ELAA ADVMVVAAYGLILPQ VLDTPKYGCLNIHGSLLPRWR
Sbjct 61 QPLHFKASTEEGLAAQQELAALGADVMVVAAYGLILPQAVLDTPKYGCLNIHGSLLPRWR 120
Query 121 GAAPIQRAIAAGDAETGVTIMKMAAGLDTGDMMFKTYCPIEASDTSASLYEKLAAQGAEA 180
GAAPIQRAIA GD ETG+TIM+MAAGLDTGDMM+KTYCPI + DTSA+L++KLAAQGA A
Sbjct 121 GAAPIQRAIATGDDETGITIMQMAAGLDTGDMMYKTYCPITSEDTSATLHDKLAAQGATA 180
Query 181 ICTVLECEQQLQKFLAEREVQDENQTVYAHKLVKAEAQIDWTQDAIQIDRNIRAFNPWPV 240
IC VLE E+ LQK+LAEREVQDE+ TVYAHKLVK+EA+IDW+ +A+Q+DRNIRAFNPWPV
Sbjct 181 ICAVLESEETLQKYLAEREVQDESLTVYAHKLVKSEARIDWSMNAVQVDRNIRAFNPWPV 240
Query 241 AFIPLDDKNNLRVWESTVSKLIAPDAEAGKIIAMDKHGIHVACGTGV-VCLTALQWPGGK 299
AFI LD+ N LRVW ST+S +A+AG+IIA+DK G+HVACG +CLT++QWPGGK
Sbjct 241 AFIQLDENNALRVWNSTISSQSKVNAQAGEIIAIDKQGVHVACGENTFICLTSVQWPGGK 300
Query 300 ALNPVQIIQTQKLNIGQVL 318
ALN QI QTQKL++GQ+L
Sbjct 301 ALNAQQIAQTQKLHVGQIL 319
>B7I2C3 Methionyl-tRNA formyltransferase [Acinetobacter baumannii
(strain AB0057)]
Length=320
Score = 510 bits (1313), Expect = 0.0
Identities = 248/319 (78%), Positives = 284/319 (89%), Gaps = 1/319 (0%)
Query 1 VKIIFAGTPDFAATALDALIKTPHDIVAVYTQPDRKAGRGQKLTPSPVKQLALEHNLPVL 60
+KIIFAGTP+FAATAL AL+KT H+I+AVYTQPDRKAGRGQKLTPSPVKQLALEHN+PV
Sbjct 1 MKIIFAGTPEFAATALAALLKTSHEIIAVYTQPDRKAGRGQKLTPSPVKQLALEHNIPVY 60
Query 61 QPLHFKSSTEEGLAAQAELAAFNADVMVVAAYGLILPQIVLDTPKYGCLNIHGSLLPRWR 120
QPLHFK+STEEGLAAQ ELAA ADVMVVAAYGLILPQ VLDTPKYGCLNIHGSLLPRWR
Sbjct 61 QPLHFKASTEEGLAAQQELAALGADVMVVAAYGLILPQAVLDTPKYGCLNIHGSLLPRWR 120
Query 121 GAAPIQRAIAAGDAETGVTIMKMAAGLDTGDMMFKTYCPIEASDTSASLYEKLAAQGAEA 180
GAAPIQRAIA GD ETG+TIM+MAAGLDTGDMM+KTYCPI + DTSA+L++KLAAQGA A
Sbjct 121 GAAPIQRAIATGDDETGITIMQMAAGLDTGDMMYKTYCPIASEDTSATLHDKLAAQGATA 180
Query 181 ICTVLECEQQLQKFLAEREVQDENQTVYAHKLVKAEAQIDWTQDAIQIDRNIRAFNPWPV 240
IC VLE E+ LQK+LAEREVQDE+ TVYAHKLVK+EA+IDW+ +A+Q+DRNIRAFNPWPV
Sbjct 181 ICAVLESEETLQKYLAEREVQDESLTVYAHKLVKSEARIDWSMNAVQVDRNIRAFNPWPV 240
Query 241 AFIPLDDKNNLRVWESTVSKLIAPDAEAGKIIAMDKHGIHVACGTGV-VCLTALQWPGGK 299
AFI LD+ N LRVW S +S +A+AG+IIA+DK G+HVACG +CLT++QWPGGK
Sbjct 241 AFIQLDENNALRVWNSIISSQSKVNAQAGEIIAIDKQGVHVACGENTFICLTSVQWPGGK 300
Query 300 ALNPVQIIQTQKLNIGQVL 318
ALN QI QTQKL++GQ+L
Sbjct 301 ALNAQQIAQTQKLHVGQIL 319
>B0VQ12 Methionyl-tRNA formyltransferase [Acinetobacter baumannii
(strain SDF)]
Length=320
Score = 509 bits (1311), Expect = 0.0
Identities = 248/319 (78%), Positives = 284/319 (89%), Gaps = 1/319 (0%)
Query 1 VKIIFAGTPDFAATALDALIKTPHDIVAVYTQPDRKAGRGQKLTPSPVKQLALEHNLPVL 60
+KIIFAGTP+FAATAL AL+KT H+I+AVYTQPDRKAGRGQKLTPSPVKQL LE+N+PV
Sbjct 1 MKIIFAGTPEFAATALAALLKTSHEIIAVYTQPDRKAGRGQKLTPSPVKQLVLEYNIPVY 60
Query 61 QPLHFKSSTEEGLAAQAELAAFNADVMVVAAYGLILPQIVLDTPKYGCLNIHGSLLPRWR 120
QPLHFK+STEEGLAAQ ELAA ADVMVVAAYGLILPQ VLDTPKYGCLNIHGSLLPRWR
Sbjct 61 QPLHFKASTEEGLAAQQELAALGADVMVVAAYGLILPQAVLDTPKYGCLNIHGSLLPRWR 120
Query 121 GAAPIQRAIAAGDAETGVTIMKMAAGLDTGDMMFKTYCPIEASDTSASLYEKLAAQGAEA 180
GAAPIQRAIA GD ETG+TIM+MAAGLDTGDMM+KTYCPI + DTSA+L++KLAAQGA A
Sbjct 121 GAAPIQRAIATGDDETGITIMQMAAGLDTGDMMYKTYCPITSEDTSATLHDKLAAQGATA 180
Query 181 ICTVLECEQQLQKFLAEREVQDENQTVYAHKLVKAEAQIDWTQDAIQIDRNIRAFNPWPV 240
IC VLE E+ LQK+LAEREVQDE+ TVYAHKLVK+EA+IDW+ +A+Q+DRNIRAFNPWPV
Sbjct 181 ICAVLESEETLQKYLAEREVQDESLTVYAHKLVKSEARIDWSMNAVQVDRNIRAFNPWPV 240
Query 241 AFIPLDDKNNLRVWESTVSKLIAPDAEAGKIIAMDKHGIHVACGTGV-VCLTALQWPGGK 299
AFI LD+ N LRVW ST+S DA+AG+IIA+DK G+HVACG +CLT++QWPGGK
Sbjct 241 AFIQLDENNALRVWYSTISNQNKADAKAGEIIAIDKQGVHVACGENTFICLTSVQWPGGK 300
Query 300 ALNPVQIIQTQKLNIGQVL 318
ALN QI QTQKL++GQ+L
Sbjct 301 ALNAQQIAQTQKLHVGQIL 319
>A8GKG6 Methionyl-tRNA formyltransferase [Serratia proteamaculans
(strain 568)]
Length=314
Score = 338 bits (866), Expect = 2e-119
Identities = 177/311 (57%), Positives = 222/311 (71%), Gaps = 10/311 (3%)
Query 1 VKIIFAGTPDFAATALDALIKTPHDIVAVYTQPDRKAGRGQKLTPSPVKQLALEHNLPVL 60
++IIFAGTPDFAA LDAL+ + H IV V+TQPDR AGRG KLTPSPVK LA +H+LPV
Sbjct 5 LRIIFAGTPDFAARHLDALLSSGHQIVGVFTQPDRPAGRGNKLTPSPVKVLAEQHHLPVF 64
Query 61 QPLHFKSSTEEGLAAQAELAAFNADVMVVAAYGLILPQIVLDTPKYGCLNIHGSLLPRWR 120
QP + + L A NADVMVV AYGLILP+ VLD P+ GC+N+HGSLLPRWR
Sbjct 65 QPKSLRPEENQHLVAD-----LNADVMVVVAYGLILPKAVLDMPRLGCINVHGSLLPRWR 119
Query 121 GAAPIQRAIAAGDAETGVTIMKMAAGLDTGDMMFKTYCPIEASDTSASLYEKLAAQGAEA 180
GAAPIQR++ AGD ETGVTIM+M GLDTGDMM K CPIEA DTSASLY+KLA G +
Sbjct 120 GAAPIQRSLWAGDHETGVTIMQMDVGLDTGDMMHKIACPIEADDTSASLYDKLAQLGPQG 179
Query 181 ICTVLECEQQLQKFLAEREVQDENQTVYAHKLVKAEAQIDWTQDAIQIDRNIRAFNPWPV 240
+ T L QQ+ A+REVQDE+ YA KL K EA++DW A+Q++R +RAFNPWPV
Sbjct 180 MLTTL---QQMAAGTAKREVQDESLVTYAEKLSKEEARLDWNLPAVQLERCVRAFNPWPV 236
Query 241 AFIPLDDKNNLRVWESTVSKLIAPDAEAGKIIAMDKHGIHVACGTGVVCLTALQWPGGKA 300
++ +DD+ ++VW++TV A DAE G II DKHGI VA G++ LT LQ G K
Sbjct 237 SYFTIDDQ-PVKVWQATVLAQNA-DAEPGTIIHADKHGIQVATAEGILNLTQLQPAGKKP 294
Query 301 LNPVQIIQTQK 311
++ ++ +++
Sbjct 295 MSAQDLLNSRR 305
>B5FCW7 Methionyl-tRNA formyltransferase [Aliivibrio fischeri
(strain MJ11)]
Length=315
Score = 331 bits (849), Expect = 7e-117
Identities = 176/311 (57%), Positives = 221/311 (71%), Gaps = 10/311 (3%)
Query 1 VKIIFAGTPDFAATALDALIKTPHDIVAVYTQPDRKAGRGQKLTPSPVKQLALEHNLPVL 60
++IIFAGTPDFAA L ALI + H+++ VYTQPDR AGRG+KLT SPVK+LALEHN+PV
Sbjct 5 LRIIFAGTPDFAARHLSALIDSHHEVIGVYTQPDRPAGRGKKLTASPVKELALEHNIPVF 64
Query 61 QPLHFKSSTEEGLAAQAELAAFNADVMVVAAYGLILPQIVLDTPKYGCLNIHGSLLPRWR 120
QP +FKS A+ ELA NAD+MVV AYGL+LPQ VLDTPK GC+N+HGS+LPRWR
Sbjct 65 QPENFKSDE-----AKQELADQNADLMVVVAYGLLLPQAVLDTPKLGCINVHGSILPRWR 119
Query 121 GAAPIQRAIAAGDAETGVTIMKMAAGLDTGDMMFKTYCPIEASDTSASLYEKLAAQGAEA 180
GAAPIQR+I AGDAETGVTIM+M GLDTGDM+ PIEA+DTSAS+Y+KLA G A
Sbjct 120 GAAPIQRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEATDTSASMYDKLAELGPVA 179
Query 181 ICTVLECEQQLQKFLAEREVQDENQTVYAHKLVKAEAQIDWTQDAIQIDRNIRAFNPWPV 240
+ ++C + A + QD+ YA KL K EA+IDWT DAI I+R +RAFNPWP+
Sbjct 180 L---VDCLSDIADGSAIAQKQDDELANYAKKLSKEEAKIDWTMDAIAIERCVRAFNPWPM 236
Query 241 AFIPLDDKNNLRVWESTVSKLIAPDAEAGKIIAMDKHGIHVACGTGVVCLTALQWPGGKA 300
+ ++DK ++VW+S V DA G II DK GI+VA G+ + LQ PG KA
Sbjct 237 SHFSVEDK-AIKVWQSRVESYTG-DATPGTIIQADKTGIYVATGSDAIVFEQLQVPGKKA 294
Query 301 LNPVQIIQTQK 311
+ I+ ++K
Sbjct 295 MGVQDILNSRK 305
>A7N122 Methionyl-tRNA formyltransferase [Vibrio campbellii (strain
ATCC BAA-1116)]
Length=315
Score = 330 bits (846), Expect = 2e-116
Identities = 172/310 (55%), Positives = 223/310 (72%), Gaps = 10/310 (3%)
Query 1 VKIIFAGTPDFAATALDALIKTPHDIVAVYTQPDRKAGRGQKLTPSPVKQLALEHNLPVL 60
++I+FAGTPDFAA L AL+ + H+++AVYTQPDR AGRG+KLT SPVK +ALEH++PV
Sbjct 5 LRIVFAGTPDFAARHLAALLSSEHEVIAVYTQPDRPAGRGKKLTASPVKTIALEHDIPVY 64
Query 61 QPLHFKSSTEEGLAAQAELAAFNADVMVVAAYGLILPQIVLDTPKYGCLNIHGSLLPRWR 120
QP +FKS A+ ELA NAD+MVV AYGL+LPQ+VLDTPK GC+N+HGS+LPRWR
Sbjct 65 QPENFKSDE-----AKQELADLNADIMVVVAYGLLLPQVVLDTPKLGCINVHGSILPRWR 119
Query 121 GAAPIQRAIAAGDAETGVTIMKMAAGLDTGDMMFKTYCPIEASDTSASLYEKLAAQGAEA 180
GAAPIQR+I AGDAETGVTIM+M GLDTGDM+ PIEASDTSAS+YEKLA G +A
Sbjct 120 GAAPIQRSIWAGDAETGVTIMQMDIGLDTGDMLKIATLPIEASDTSASMYEKLAGLGPDA 179
Query 181 ICTVLECEQQLQKFLAEREVQDENQTVYAHKLVKAEAQIDWTQDAIQIDRNIRAFNPWPV 240
+ ++C + A+ QD+ YA KL K EA+IDW DA I+R +RAFNPWP+
Sbjct 180 L---IDCLADIAAGKAKPVKQDDELANYAKKLSKEEARIDWNDDAAHIERCVRAFNPWPM 236
Query 241 AFIPLDDKNNLRVWESTVSKLIAPDAEAGKIIAMDKHGIHVACGTGVVCLTALQWPGGKA 300
+ + N+++VW+S V + + D AG I+ DK GI+V G GV+ L LQ PG KA
Sbjct 237 SHFEAAE-NSIKVWQSRVEEQTS-DKPAGTILQADKTGIYVVTGNGVLVLEQLQVPGKKA 294
Query 301 LNPVQIIQTQ 310
++ I+ ++
Sbjct 295 MSVQDILNSR 304
>Q0HPA7 Methionyl-tRNA formyltransferase [Shewanella sp. (strain
MR-4)]
Length=318
Score = 330 bits (846), Expect = 2e-116
Identities = 173/310 (56%), Positives = 218/310 (70%), Gaps = 10/310 (3%)
Query 1 VKIIFAGTPDFAATALDALIKTPHDIVAVYTQPDRKAGRGQKLTPSPVKQLALEHNLPVL 60
+ IIFAGTPDFAA L ALI + H+++AVYTQPDR AGRG+KLT SPVK+LA+ HN+PV
Sbjct 4 LNIIFAGTPDFAARHLQALINSHHNVIAVYTQPDRPAGRGKKLTASPVKELAVSHNIPVY 63
Query 61 QPLHFKSSTEEGLAAQAELAAFNADVMVVAAYGLILPQIVLDTPKYGCLNIHGSLLPRWR 120
QP + AQ ELAA NAD+MVV AYGLILP++VLDTP+ GC+N+HGS+LPRWR
Sbjct 64 QPGSLRKEP-----AQQELAALNADIMVVVAYGLILPKVVLDTPRLGCINVHGSILPRWR 118
Query 121 GAAPIQRAIAAGDAETGVTIMKMAAGLDTGDMMFKTYCPIEASDTSASLYEKLAAQGAEA 180
GAAPIQRA+ AGD ETGVTIM+M GLDTGDM+ KTY PIE DTSA+LYEKLA QG +A
Sbjct 119 GAAPIQRALWAGDKETGVTIMQMDVGLDTGDMLLKTYLPIEDDDTSATLYEKLALQGPDA 178
Query 181 ICTVLECEQQLQKFLAEREVQDENQTVYAHKLVKAEAQIDWTQDAIQIDRNIRAFNPWPV 240
+ LE L E QDE YA KL K EA++DW++ A Q+ + +RAFNPWPV
Sbjct 179 LLQALE---GLANGTLTAEKQDEALANYAEKLSKEEARLDWSKSATQLWQEVRAFNPWPV 235
Query 241 AFIPLDDKNNLRVWESTVSKLIAPDAEAGKIIAMDKHGIHVACGTGVVCLTALQWPGGKA 300
++ N ++VW++ VS + +A G II+ K GI VA G GV+ L ++Q PG K
Sbjct 236 SYFE-HQGNTIKVWQTQVS-TTSSNAAPGTIISASKKGIEVATGDGVLTLLSMQLPGKKP 293
Query 301 LNPVQIIQTQ 310
L+ I+ +
Sbjct 294 LSVADILNAR 303
>A8FP74 Methionyl-tRNA formyltransferase [Shewanella sediminis
(strain HAW-EB3)]
Length=329
Score = 330 bits (847), Expect = 2e-116
Identities = 180/310 (58%), Positives = 223/310 (72%), Gaps = 10/310 (3%)
Query 1 VKIIFAGTPDFAATALDALIKTPHDIVAVYTQPDRKAGRGQKLTPSPVKQLALEHNLPVL 60
+ IIFAGTPDFAA L ALI + H+I+ VY+QPDR AGRG+KL SPVK LA+EHNLPV
Sbjct 4 LNIIFAGTPDFAARHLQALIDSEHNIIGVYSQPDRPAGRGKKLQASPVKSLAIEHNLPVF 63
Query 61 QPLHFKSSTEEGLAAQAELAAFNADVMVVAAYGLILPQIVLDTPKYGCLNIHGSLLPRWR 120
QP KS +E AQAELA NAD+MVV AYGLILP++VLDTPK GC+N+HGS+LPRWR
Sbjct 64 QP---KSLRDE--QAQAELANLNADIMVVVAYGLILPKVVLDTPKLGCINVHGSILPRWR 118
Query 121 GAAPIQRAIAAGDAETGVTIMKMAAGLDTGDMMFKTYCPIEASDTSASLYEKLAAQGAEA 180
GAAPIQRA+ AGD ETGVTIM+M GLDTGDM+ KT PIE +DTSASLYEKLA QG +A
Sbjct 119 GAAPIQRALWAGDTETGVTIMQMDIGLDTGDMLLKTRLPIEDNDTSASLYEKLALQGPDA 178
Query 181 ICTVLECEQQLQKFLAEREVQDENQTVYAHKLVKAEAQIDWTQDAIQIDRNIRAFNPWPV 240
+ +E L K E QDE+ YA KL K EA++DW++ A+++ R IRAFNPWP+
Sbjct 179 L---IEALTGLAKGELTAEKQDESLANYAEKLSKEEAELDWSKSALELWREIRAFNPWPI 235
Query 241 AFIPLDDKNNLRVWESTVSKLIAPDAEAGKIIAMDKHGIHVACGTGVVCLTALQWPGGKA 300
+ D +++V ES VS L + DA AG II+ K GI +A G GV+ L +Q PG K
Sbjct 236 SHFTHQDA-SIKVRESAVSNL-SSDAPAGTIISAGKQGIDIATGDGVLTLLNMQLPGKKP 293
Query 301 LNPVQIIQTQ 310
L+ I+ ++
Sbjct 294 LSVGDILNSR 303
>P23882 Methionyl-tRNA formyltransferase [Escherichia coli (strain
K12)]
Length=315
Score = 313 bits (802), Expect = 9e-110
Identities = 163/311 (52%), Positives = 221/311 (71%), Gaps = 10/311 (3%)
Query 1 VKIIFAGTPDFAATALDALIKTPHDIVAVYTQPDRKAGRGQKLTPSPVKQLALEHNLPVL 60
++IIFAGTPDFAA LDAL+ + H++V V+TQPDR AGRG+KL PSPVK LA E LPV
Sbjct 5 LRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVF 64
Query 61 QPLHFKSSTEEGLAAQAELAAFNADVMVVAAYGLILPQIVLDTPKYGCLNIHGSLLPRWR 120
QP+ + + L A+ + ADVMVV AYGLILP+ VL+ P+ GC+N+HGSLLPRWR
Sbjct 65 QPVSLRPQENQQLVAELQ-----ADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWR 119
Query 121 GAAPIQRAIAAGDAETGVTIMKMAAGLDTGDMMFKTYCPIEASDTSASLYEKLAAQGAEA 180
GAAPIQR++ AGDAETGVTIM+M GLDTGDM++K CPI A DTS +LY+KLA G +
Sbjct 120 GAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPITAEDTSGTLYDKLAELGPQG 179
Query 181 ICTVLECEQQLQKFLAEREVQDENQTVYAHKLVKAEAQIDWTQDAIQIDRNIRAFNPWPV 240
+ T L +QL A+ EVQDE YA KL K EA+IDW+ A Q++R IRAFNPWP+
Sbjct 180 LITTL---KQLADGTAKPEVQDETLVTYAEKLSKEEARIDWSLSAAQLERCIRAFNPWPM 236
Query 241 AFIPLDDKNNLRVWESTVSKLIAPDAEAGKIIAMDKHGIHVACGTGVVCLTALQWPGGKA 300
+++ ++ + ++VW+++V A +A G I+ +K GI VA G G++ L +LQ G KA
Sbjct 237 SWLEIEGQ-PVKVWKASVID-TATNAAPGTILEANKQGIQVATGDGILNLLSLQPAGKKA 294
Query 301 LNPVQIIQTQK 311
++ ++ +++
Sbjct 295 MSAQDLLNSRR 305
>O85732 Methionyl-tRNA formyltransferase [Pseudomonas aeruginosa
(strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 /
LMG 12228 / 1C / PRS 101 / PAO1)]
Length=314
Score = 310 bits (794), Expect = 1e-108
Identities = 169/320 (53%), Positives = 216/320 (68%), Gaps = 14/320 (4%)
Query 1 VKIIFAGTPDFAATALDALIKTPHDIVAVYTQPDRKAGRGQKLTPSPVKQLALEHNLPVL 60
++I+FAGTP+FAA L AL+ TPH IVAVYTQPDR AGRGQKL PS VK LALEH LPV+
Sbjct 5 LRIVFAGTPEFAAEHLKALLDTPHRIVAVYTQPDRPAGRGQKLMPSAVKSLALEHGLPVM 64
Query 61 QPLHFKSSTEEGLAAQAELAAFNADVMVVAAYGLILPQIVLDTPKYGCLNIHGSLLPRWR 120
QP +++ AQAELAA AD+MVV AYGLILPQ VLD P+ GC+N H SLLPRWR
Sbjct 65 QPQSLRNAE-----AQAELAALRADLMVVVAYGLILPQAVLDIPRLGCINSHASLLPRWR 119
Query 121 GAAPIQRAIAAGDAETGVTIMKMAAGLDTGDMMFKTYCPIEASDTSASLYEKLAAQGAEA 180
GAAPIQRA+ AGDAE+GVT+M+M AGLDTG M+ K PI A+DT SL+++LAA G +A
Sbjct 120 GAAPIQRAVEAGDAESGVTVMQMEAGLDTGPMLLKVSTPISAADTGGSLHDRLAALGPKA 179
Query 181 ICTVLECEQQLQKFLAEREVQDENQTVYAHKLVKAEAQIDWTQDAIQIDRNIRAFNPWPV 240
V+E L E+QD+ YAHKL K EA++DW++ A++++R +RAF PWPV
Sbjct 180 ---VIEAIAGLAAGTLHGEIQDDALATYAHKLNKDEARLDWSRPAVELERQVRAFTPWPV 236
Query 241 AFIPLDDKNNLRVWESTVSKLIAPDAEAGKIIAMDKHGIHVACGTGVVCLTALQWPGGKA 300
L D L+V +++ + G I+ + G+ VACG G + LT LQ PGGK
Sbjct 237 CHTSLADA-PLKVLGASLGQ---GSGAPGTILEASRDGLLVACGEGALRLTRLQLPGGKP 292
Query 301 LNPVQIIQT--QKLNIGQVL 318
L + + ++ GQVL
Sbjct 293 LAFADLYNSRREQFAAGQVL 312
>O87726 Methionyl-tRNA formyltransferase [Vibrio alginolyticus]
Length=247
Score = 225 bits (574), Expect = 3e-76
Identities = 120/236 (51%), Positives = 158/236 (67%), Gaps = 6/236 (3%)
Query 75 AQAELAAFNADVMVVAAYGLILPQIVLDTPKYGCLNIHGSLLPRWRGAAPIQRAIAAGDA 134
A+ ELA NAD+MV AYG++LPQ VLDTPK GC+N+HGS+LPRWR AAPIQR+I AGDA
Sbjct 7 AKQELADLNADLMVFVAYGMLLPQAVLDTPKLGCINVHGSILPRWRCAAPIQRSIWAGDA 66
Query 135 ETGVTIMKMAAGLDTGDMMFKTYCPIEASDTSASLYEKLAAQGAEAICTVLECEQQLQKF 194
ETGVTIM+M GLDTGDM+ PIE +DTSAS+YEKLA G EA+ ++C +
Sbjct 67 ETGVTIMQMDIGLDTGDMLKIATLPIETTDTSASMYEKLAELGPEAL---IDCLADIAAG 123
Query 195 LAEREVQDENQTVYAHKLVKAEAQIDWTQDAIQIDRNIRAFNPWPVAFIPLDDKNNLRVW 254
A QD+ YA KL K EA+I+W DA I+R +RAFNPWP++ + N+++VW
Sbjct 124 KAVPVKQDDELANYAKKLSKEEARINWNDDAAHIERCVRAFNPWPMSHFEAAE-NSIKVW 182
Query 255 ESTVSKLIAPDAEAGKIIAMDKHGIHVACGTGVVCLTALQWPGGKALNPVQIIQTQ 310
++ P +G I+ DK GI+V G GV+ L LQ PG KA++ I+ ++
Sbjct 183 KAVWQS--KPVTTSGTIVQADKTGIYVVTGNGVLVLEQLQVPGKKAMSVQDILNSR 236
>P94463 Methionyl-tRNA formyltransferase [Bacillus subtilis (strain
168)]
Length=317
Score = 221 bits (564), Expect = 8e-74
Identities = 127/319 (40%), Positives = 185/319 (58%), Gaps = 13/319 (4%)
Query 2 KIIFAGTPDFAATALDALIKTPHDIVAVYTQPDRKAGRGQKLTPSPVKQLALEHNLPVLQ 61
+I+F GTPDF+ L LI+ +++V V TQPDR GR + LTP PVK+ AL H +PVLQ
Sbjct 3 RIVFMGTPDFSVPVLRTLIEDGYEVVGVVTQPDRPKGRKKVLTPPPVKEEALRHGIPVLQ 62
Query 62 PLHFKSSTEEGLAAQAELAAFNADVMVVAAYGLILPQIVLDTPKYGCLNIHGSLLPRWRG 121
P + + E ++ A D++V AA+G ILP+ +LD+PKYGC+N+H SLLP RG
Sbjct 63 PEKVRLTEEI-----EKVLALKPDLIVTAAFGQILPKELLDSPKYGCINVHASLLPELRG 117
Query 122 AAPIQRAIAAGDAETGVTIMKMAAGLDTGDMMFKTYCPIEASDTSASLYEKLAAQGAEAI 181
API +I G +TG+TIM M LD GDM+ K IE +D +L++KL+ GA+ +
Sbjct 118 GAPIHYSILQGKKKTGITIMYMVEKLDAGDMISKVEVDIEETDNVGTLHDKLSVAGAKLL 177
Query 182 CTVLECEQQLQKFLAEREVQDENQTVYAHKLVKAEAQIDWTQDAIQIDRNIRAFNPWPVA 241
E + E QDE + YA + + + +DW++ ++ IR NPWPVA
Sbjct 178 S---ETVPNVIAGSISPEKQDEEKATYAPNIKREQELLDWSRTGEELYNQIRGLNPWPVA 234
Query 242 FIPLDDKNNLRVWESTVSKLIAP-DAEAGKIIAMDKHGIHVACGT-GVVCLTALQWPGGK 299
+ L+ + NL++W S K+ AP AE G ++A++K GI VA G + LT LQ G K
Sbjct 235 YTTLNGQ-NLKIWAS--KKIAAPTTAEPGTVVAVEKEGIIVATGNETALLLTELQPAGKK 291
Query 300 ALNPVQIIQTQKLNIGQVL 318
+ ++ + G VL
Sbjct 292 RMKGEDFVRGAHVEAGDVL 310
>O05101 Methionyl-tRNA formyltransferase [Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787)]
Length=310
Score = 217 bits (552), Expect = 4e-72
Identities = 124/318 (39%), Positives = 191/318 (60%), Gaps = 10/318 (3%)
Query 1 VKIIFAGTPDFAATALDALIKTPHDIVAVYTQPDRKAGRGQKLTPSPVKQLALEHNLPVL 60
+KI+F GTP+F+ +L+ LI+ +D+ AV TQPD+ GRG+KL S VK++A+++N+PV
Sbjct 2 LKIVFMGTPEFSVPSLEKLIEN-YDVRAVLTQPDKPKGRGKKLAMSEVKEVAVKNNIPVF 60
Query 61 QPLHFKSSTEEGLAAQAELAAFNADVMVVAAYGLILPQIVLDTPKYGCLNIHGSLLPRWR 120
QP+ K+ E +L D +VV A+G IL + VLD PKY C+N+H SLLP +R
Sbjct 61 QPVKLKNDIE----VINKLKEIAPDFIVVVAFGQILSKEVLDIPKYACINLHASLLPNYR 116
Query 121 GAAPIQRAIAAGDAETGVTIMKMAAGLDTGDMMFKTYCPIEASDTSASLYEKLAAQGAEA 180
GAAPI AI G+ +TG T M MA GLDTGDM+ K I+ T+ L++ L +GA+
Sbjct 117 GAAPINWAIINGETKTGNTTMIMAEGLDTGDMLLKDEVDIKRDMTAGELHDILMNRGADL 176
Query 181 ICTVLECEQQLQKFLAEREVQDENQTVYAHKLVKAEAQIDWTQDAIQIDRNIRAFNPWPV 240
+ ++ + K + E Q E +T YA L K +I+W + +I IR NPWP+
Sbjct 177 LVKTID---EFSKGNIKPEKQGEPETDYAAMLSKDTGKINWNDKSERIYNLIRGLNPWPL 233
Query 241 AFIPLDDKNNLRVWESTVSKLIAPDAEAGKIIAMDKHGIHVACGTGVVCLTALQWPGGKA 300
A+ +DK +++ E+ + AP+ E G I +D +GI V G + +T +Q+PG K+
Sbjct 234 AYSSYNDK-VMKIHEAKILD-AAPEGEPGLITNVDNNGIEVNSSDGKILITKIQFPGKKS 291
Query 301 LNPVQIIQTQKLNIGQVL 318
+N + I+ ++ G +L
Sbjct 292 MNVGEYIRGNNIDKGVIL 309
>P50932 Methionyl-tRNA formyltransferase [Rickettsia prowazekii
(strain Madrid E)]
Length=303
Score = 201 bits (510), Expect = 7e-66
Identities = 122/304 (40%), Positives = 165/304 (54%), Gaps = 20/304 (7%)
Query 1 VKIIFAGTPDFAATALDALIKTPHDIVAVYTQPDRKAGRGQKLTPSPVKQLALEHNLPVL 60
+K+IF GTP+FA L LI H++ AV+TQ + GRG L SP+ QLA EH +PV
Sbjct 1 MKVIFMGTPEFAVPTLKKLI-IHHEVKAVFTQQPKAKGRGLHLAKSPIHQLAFEHQIPVY 59
Query 61 QPLHFKSSTEEGLAAQAELAAFNADVMVVAAYGLILPQIVLDTPKYGCLNIHGSLLPRWR 120
P ++ L + +AD++VV AYG I+P+ +L+ KYGCLNIH S LPR R
Sbjct 60 SPSTLRNDETINL-----IKKIDADIIVVIAYGFIVPKAILEAKKYGCLNIHPSDLPRHR 114
Query 121 GAAPIQRAIAAGDAETGVTIMKMAAGLDTGDMMFKTYCPIEASDTSASLYEKLAAQGAEA 180
GAAP+QR I GD ++ V IM+M +GLDTGD++ K +E T L K A GAE
Sbjct 115 GAAPLQRTIIEGDRKSSVCIMRMDSGLDTGDILLKEDLNLERRITLDELSNKCAHLGAEL 174
Query 181 ICTVLECEQQLQKFLAEREVQDENQTVYAHKLVKAEAQIDWTQDAIQIDRNIRAFNPWPV 240
+ L + Q N YAHKL KAE +I+W + A ID IR NPWP
Sbjct 175 LIKTLANIDNIVPI-----KQSSNGITYAHKLTKAEGKINWYESAYSIDCKIRGMNPWPG 229
Query 241 AFIPLDDK--NNLRVWESTVSKLIAPDAEAGKIIAMDKHGIHVACGTGVVCLTALQWPGG 298
A+ +DK LR + P G +I + + +ACG+G++ + LQ
Sbjct 230 AYFSYNDKIIKILRAEYFNYNHHFIP----GTVI---NNKLEIACGSGILRVKKLQQESK 282
Query 299 KALN 302
KALN
Sbjct 283 KALN 286
>P43523 Methionyl-tRNA formyltransferase [Thermus thermophilus]
Length=305
Score = 165 bits (418), Expect = 4e-52
Identities = 108/301 (36%), Positives = 163/301 (54%), Gaps = 16/301 (5%)
Query 1 VKIIFAGTPDFAATALDALIKTPHDIVAVYTQPDRKAGRGQKLTPSPVKQLALEHNLPVL 60
+++ F GTP +A LDAL K H +V V +QPD+ GRG + PSPV + A LP+L
Sbjct 1 MRVAFFGTPLWAVPVLDALRKR-HQVVLVVSQPDKPQGRGLRPAPSPVARYAEAEGLPLL 59
Query 61 QPLHFKSSTEEGLAAQAELAAFNADVMVVAAYGLILPQIVLDTPKYGCLNIHGSLLPRWR 120
+P + EE AA +V VVAAYG ++P+ LD P +G LN+H SLLP++R
Sbjct 60 RPARLR---EEAFLEALRQAA--PEVAVVAAYGKLIPKEALDIPPHGFLNLHPSLLPKYR 114
Query 121 GAAPIQRAIAAGDAETGVTIMKMAAGLDTGDMMFKTYCPIEASDTSASLYEKLAAQGAEA 180
GAAP+QRA+ AG+ ETGV+IM++ GLDTG + PI + + +L +L +G E
Sbjct 115 GAAPVQRALLAGERETGVSIMRLDEGLDTGPLYAVWRTPILPDEDAVALGNRLRDKGVEL 174
Query 181 ICTVLECEQQLQKFLAEREVQDENQTVYAHKLVKAEAQIDWTQDAIQIDRNIRAFNPWPV 240
+ VLE +L E EV YA L K E ++D+ + A + R RA PWP
Sbjct 175 LLEVLERLPELTPRPQEGEVS------YAPPLSKEEGRLDFGESAEALYRRHRAVQPWPG 228
Query 241 AFIPLDDKNNLRVWESTVSKLIAPDAEAGKIIAMDKHGIHVACGTGVVCLTALQWPGGKA 300
++ + R ++ + + E G + + G+ V +G++ L +Q G +A
Sbjct 229 SYF----FHRGRRVKALRLRPEPGEGEPGVVARVGPEGVAVGTASGLLLLLEVQPEGRRA 284
Query 301 L 301
+
Sbjct 285 M 285
>P77398 UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic
acid oxidase, UDP-4-keto-hexauronic acid decarboxylating
[Escherichia coli (strain K12)]
Length=660
Score = 99.8 bits (247), Expect = 2e-26
Identities = 86/322 (27%), Positives = 148/322 (46%), Gaps = 22/322 (7%)
Query 1 VKIIFAGTPDFAATALDALIKTPHDIVAVYTQPDRKAGRGQKLTPSPVKQLALEHNLPVL 60
+K + D ++AL+ ++I A++T D G+K V +LA E +PV
Sbjct 1 MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNP---GEKAFYGSVARLAAERGIPVY 57
Query 61 QPLHFKSSTEEGLAAQAELAAFNADVMVVAAYGLILPQIVLDTPKYGCLNIHGSLLPRWR 120
P + L + +A + DV+ Y ++ +L G N+HGSLLP++R
Sbjct 58 AP----DNVNHPLWVE-RIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYR 112
Query 121 GAAPIQRAIAAGDAETGVTIMKMAAGLDTGDMMFKTYCPIEASDTSASLYEKL---AAQG 177
G AP+ + G+ ETGVT+ +M D G ++ + I D + +L+ KL A Q
Sbjct 113 GRAPLNWVLVNGETETGVTLHRMVKRADAGAIVAQLRIAIAPDDIAITLHHKLCHAARQL 172
Query 178 AEAICTVLECEQQLQKFLAEREVQDENQTVYAHKLVKAEAQIDWTQDAIQIDRNIRAF-N 236
E ++ L+ +A+R EN+ + ++ ++W + A + +RA +
Sbjct 173 LEQTLPAIKHGNILE--IAQR----ENEATCFGRRTPDDSFLEWHKPASVLHNMVRAVAD 226
Query 237 PWPVAFIPLDDKNNLRVWESTVSKLIAPDAEAGKIIAMDKHGIHVACGTGVVCLTALQWP 296
PWP AF + ++ VW S V A A+ G +I++ + +ACG G + + Q
Sbjct 227 PWPGAFSYVGNQ-KFTVWSSRVHP-HASKAQPGSVISVAP--LLIACGDGALEIVTGQAG 282
Query 297 GGKALNPVQIIQTQKLNIGQVL 318
G + Q+ QT L G L
Sbjct 283 DGITMQGSQLAQTLGLVQGSRL 304
>Q3SY69 Mitochondrial 10-formyltetrahydrofolate dehydrogenase
[Homo sapiens]
Length=923
Score = 94.0 bits (232), Expect = 3e-24
Identities = 87/326 (27%), Positives = 141/326 (43%), Gaps = 16/326 (5%)
Query 1 VKIIFAGTPDFAATALDALIKTPHDIVAVYTQPDRKAGRGQKLTPSPVKQLALEHNLPVL 60
+K+ G F L K H +V V+T PD K G+ L + K LP
Sbjct 23 LKLALIGQSLFGQEVYSHLRKEGHRVVGVFTVPD-KDGKADPLALAAEKDGTPVFKLPKW 81
Query 61 QPLHFKSSTEEGLAAQAELAAFNADVMVVAAYGLILPQIVLDTPKYGCLNIHGSLLPRWR 120
+ K T + +A + A++ V+ +P ++D+PK+G + H S+LPR R
Sbjct 82 R---VKGKTIKEVAEAYR--SVGAELNVLPFCTQFIPMDIIDSPKHGSIIYHPSILPRHR 136
Query 121 GAAPIQRAIAAGDAETGVTIMKMAAGLDTGDMMFKTYCPIEASDTSASLYEKLAAQGAEA 180
GA+ I + GD + G ++ GLDTG ++ + C +E +DT +LY + E
Sbjct 137 GASAINWTLIMGDKKAGFSVFWADDGLDTGPILLQRSCDVEPNDTVDALYNRFLF--PEG 194
Query 181 ICTVLECEQQLQKFLAEREVQDENQTVYAHKLVKAEAQIDWTQDAIQIDRNIRAFNPWPV 240
I ++E Q + A R Q E Y K A+I W Q A + IR + P
Sbjct 195 IKAMVEAVQLIADGKAPRIPQPEEGATYEGIQKKENAEISWDQSAEVLHNWIRGHDKVPG 254
Query 241 AFIPLDDKNNLRVWESTVSKLIAPDAEAGKIIAMDKHGI-----HVACGTGVVCLTA--L 293
A+ ++ + + + ST+ P E +I K G+ V G LT L
Sbjct 255 AWTEINGQ-MVTFYGSTLLNSSVPPGEPLEIKGAKKPGLVTKNGLVLFGNDGKALTVRNL 313
Query 294 QWPGGKALNPVQIIQTQKLNIGQVLA 319
Q+ GK + Q T + ++ ++ A
Sbjct 314 QFEDGKMIPASQYFSTGETSVVELTA 339
>Q93PD8 UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic
acid oxidase, UDP-4-keto-hexauronic acid decarboxylating
[Yersinia pseudotuberculosis serotype I (strain IP32953)]
Length=667
Score = 92.8 bits (229), Expect = 5e-24
Identities = 81/299 (27%), Positives = 132/299 (44%), Gaps = 16/299 (5%)
Query 1 VKIIFAGTPDFAATALDALIKTPHDIVAVYTQPDRKAGRGQKLTPSPVKQLALEHNLPVL 60
+K I D L+AL + +DI AV+T D G+ S V ++A + LPV
Sbjct 1 MKAIVFAYHDIGCVGLNALAEAGYDIQAVFTHTDNP---GENRFFSSVARVAADLALPVF 57
Query 61 QPLHFKSSTEEGLAAQAELAAFNADVMVVAAYGLILPQIVLDTPKYGCLNIHGSLLPRWR 120
P L + + D++ Y +L +L G N+HGSLLP++R
Sbjct 58 AP----EDVNHPLWVE-RIRELQPDIIFSFYYRNMLSDEILSLAPQGGFNLHGSLLPQYR 112
Query 121 GAAPIQRAIAAGDAETGVTIMKMAAGLDTGDMMFKTYCPIEASDTSASLYEKLAAQGAEA 180
G API + G+ ETGVT+ +M D G + + I DT+ +L+ K+ E
Sbjct 113 GRAPINWVLVNGETETGVTLHQMVKKADAGPIAGQYKVAISDVDTALTLHAKMRDAAQEL 172
Query 181 ICTVLECEQQLQKFLAEREVQDENQTVYAHKLVKAEAQIDWTQDAIQIDRNIRAF-NPWP 239
+ +L ++++ Q E Y + A+ +I W + A I+ +RA P+P
Sbjct 173 LRNLL---PRMKEGPLPLTPQKEADASYFGRRTAADGEIHWQKSAFTINNLVRAVTEPYP 229
Query 240 VAFIPLDDKNNLRVWESTVSKLIAPDAEAGKIIAMDKHGIHVACGTGVVCLTALQWPGG 298
AF L + L +W S L+ + G +++ + VACG G + + Q G
Sbjct 230 GAFSYLGQR-KLTIWRSRPLDLV-HNKLPGTVLSTAP--LTVACGEGALEIITGQGEAG 284
Lambda K H a alpha
0.321 0.135 0.404 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1914570
Database: 3f961dc4d446f171afe760f4865d95ee.SwissProt.fasta
Posted date: May 13, 2024 7:37 PM
Number of letters in database: 8,191
Number of sequences in database: 22
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
