BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 140e4db2d37815dca67c94c1b2d08547.TrEMBL.fasta
22 sequences; 9,373 total letters
Query= ACIAD3596
Length=424
Score E
Sequences producing significant alignments: (Bits) Value
Q6F6T3 Replication-associated recombination protein A [Acinetobac... 837 0.0
A0A7G2SEU9 Replication-associated recombination protein A [Acinet... 836 0.0
A0A3R8ZND4 Replication-associated recombination protein A [Acinet... 810 0.0
N9BZP3 Replication-associated recombination protein A [Acinetobac... 810 0.0
A0A1P8EKW3 Replication-associated recombination protein A [Acinet... 810 0.0
A0A0M1I7Q3 Replication-associated recombination protein A [Acinet... 808 0.0
N8RI61 Replication-associated recombination protein A [Acinetobac... 789 0.0
N8RIE5 Replication-associated recombination protein A [Acinetobac... 788 0.0
N8VTY7 Replication-associated recombination protein A [Acinetobac... 788 0.0
N8V7C3 Replication-associated recombination protein A [Acinetobac... 788 0.0
A0A3R9DS83 Replication-associated recombination protein A [Acinet... 787 0.0
A0A009YDS3 Replication-associated recombination protein A [Acinet... 787 0.0
N8UGM5 Replication-associated recombination protein A [Acinetobac... 785 0.0
Q7WYJ7 Putative GTP-binding protein [Bifidobacterium longum subsp... 343 7e-118
Q50JE6 Werner helicase interacting protein 1 [Xenopus laevis] 318 1e-106
Q6QN33 AAA type ATPase [Aster yellows witches'-broom phytoplasma] 219 2e-70
H9CDQ8 RarA [Listeria rocourtiae] 191 4e-61
Q9VKW3 Replication factor C subunit 3 [Drosophila melanogaster] 69.3 4e-16
Q76LD2 RFC2 protein [Xenopus laevis] 62.0 1e-13
Q6DRF4 Replication factor C subunit 4 [Danio rerio] 60.5 4e-13
O31001 DNA polymerase III subunit gamma/tau [Thermus thermophilus] 58.9 2e-12
A0A0M9ACL9 DNA polymerase III subunit gamma/tau [Thermus aquaticus] 57.0 8e-12
>Q6F6T3 Replication-associated recombination protein A [Acinetobacter
baylyi (strain ATCC 33305 / BD413 / ADP1)]
Length=423
Score = 837 bits (2161), Expect = 0.0
Identities = 423/423 (100%), Positives = 423/423 (100%), Gaps = 0/423 (0%)
Query 1 MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL 60
MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL
Sbjct 1 MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL 60
Query 61 LLAQAVDRPFVSLSALNTGVKELREIIAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEK 120
LLAQAVDRPFVSLSALNTGVKELREIIAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEK
Sbjct 61 LLAQAVDRPFVSLSALNTGVKELREIIAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEK 120
Query 121 GKITLIGATTENPSFEVNSALLSRCQVYTLNVLDSAAIQNLIDRAIDSDSFLKQRHIHIE 180
GKITLIGATTENPSFEVNSALLSRCQVYTLNVLDSAAIQNLIDRAIDSDSFLKQRHIHIE
Sbjct 121 GKITLIGATTENPSFEVNSALLSRCQVYTLNVLDSAAIQNLIDRAIDSDSFLKQRHIHIE 180
Query 181 EYEALIQFAAGDARKALNLIDLIASTFEPDQENIVTNAVTVKVAQQNIARYDKSGEQHYD 240
EYEALIQFAAGDARKALNLIDLIASTFEPDQENIVTNAVTVKVAQQNIARYDKSGEQHYD
Sbjct 181 EYEALIQFAAGDARKALNLIDLIASTFEPDQENIVTNAVTVKVAQQNIARYDKSGEQHYD 240
Query 241 IISAFIKSIRGSDPDAALYWMARMIKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC 300
IISAFIKSIRGSDPDAALYWMARMIKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC
Sbjct 241 IISAFIKSIRGSDPDAALYWMARMIKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC 300
Query 301 FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAIDRALALAEKTANLPVPLHLRNAPT 360
FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAIDRALALAEKTANLPVPLHLRNAPT
Sbjct 301 FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAIDRALALAEKTANLPVPLHLRNAPT 360
Query 361 KLMKQQGYGADYLYPHHYPEHFVLQEYLPPELKGTKLYEFSRNKREVEGERLQQRRWQQD 420
KLMKQQGYGADYLYPHHYPEHFVLQEYLPPELKGTKLYEFSRNKREVEGERLQQRRWQQD
Sbjct 361 KLMKQQGYGADYLYPHHYPEHFVLQEYLPPELKGTKLYEFSRNKREVEGERLQQRRWQQD 420
Query 421 QQQ 423
QQQ
Sbjct 421 QQQ 423
>A0A7G2SEU9 Replication-associated recombination protein A [Acinetobacter
sp]
Length=423
Score = 836 bits (2159), Expect = 0.0
Identities = 422/423 (99%), Positives = 423/423 (100%), Gaps = 0/423 (0%)
Query 1 MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL 60
MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL
Sbjct 1 MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL 60
Query 61 LLAQAVDRPFVSLSALNTGVKELREIIAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEK 120
LLAQAVDRPFVSLSALNTGVKELREIIAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEK
Sbjct 61 LLAQAVDRPFVSLSALNTGVKELREIIAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEK 120
Query 121 GKITLIGATTENPSFEVNSALLSRCQVYTLNVLDSAAIQNLIDRAIDSDSFLKQRHIHIE 180
GKITLIGATTENPSFEVNSALLSRCQVYTLNVLDSAAIQNLIDRAIDSDSFLKQRHIHIE
Sbjct 121 GKITLIGATTENPSFEVNSALLSRCQVYTLNVLDSAAIQNLIDRAIDSDSFLKQRHIHIE 180
Query 181 EYEALIQFAAGDARKALNLIDLIASTFEPDQENIVTNAVTVKVAQQNIARYDKSGEQHYD 240
EYEALIQFAAGDARKALNLIDLIASTFEPDQENIVTNAVTVKVAQQNIARYDKSGEQHYD
Sbjct 181 EYEALIQFAAGDARKALNLIDLIASTFEPDQENIVTNAVTVKVAQQNIARYDKSGEQHYD 240
Query 241 IISAFIKSIRGSDPDAALYWMARMIKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC 300
IISAFIKSIRGSDPDAALYWMARMIKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC
Sbjct 241 IISAFIKSIRGSDPDAALYWMARMIKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC 300
Query 301 FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAIDRALALAEKTANLPVPLHLRNAPT 360
FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAIDRALALAEKTANLPVPLHLRNAPT
Sbjct 301 FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAIDRALALAEKTANLPVPLHLRNAPT 360
Query 361 KLMKQQGYGADYLYPHHYPEHFVLQEYLPPELKGTKLYEFSRNKREVEGERLQQRRWQQD 420
K+MKQQGYGADYLYPHHYPEHFVLQEYLPPELKGTKLYEFSRNKREVEGERLQQRRWQQD
Sbjct 361 KMMKQQGYGADYLYPHHYPEHFVLQEYLPPELKGTKLYEFSRNKREVEGERLQQRRWQQD 420
Query 421 QQQ 423
QQQ
Sbjct 421 QQQ 423
>A0A3R8ZND4 Replication-associated recombination protein A [Acinetobacter
soli]
Length=425
Score = 810 bits (2093), Expect = 0.0
Identities = 403/423 (95%), Positives = 416/423 (98%), Gaps = 0/423 (0%)
Query 1 MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL 60
MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL
Sbjct 2 MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL 61
Query 61 LLAQAVDRPFVSLSALNTGVKELREIIAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEK 120
LLAQAVDRPF+SLSALNTGVKELRE+IAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEK
Sbjct 62 LLAQAVDRPFISLSALNTGVKELREVIAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEK 121
Query 121 GKITLIGATTENPSFEVNSALLSRCQVYTLNVLDSAAIQNLIDRAIDSDSFLKQRHIHIE 180
GKITLIGATTENPSFEVN ALLSRCQVYTLNVLD+ AIQ LIDRA+DSD+FLK RHIHIE
Sbjct 122 GKITLIGATTENPSFEVNGALLSRCQVYTLNVLDANAIQRLIDRALDSDAFLKARHIHIE 181
Query 181 EYEALIQFAAGDARKALNLIDLIASTFEPDQENIVTNAVTVKVAQQNIARYDKSGEQHYD 240
EY+AL+QFAAGDARKALNLIDLIASTFEPDQEN+VTNAVTVKVAQQNIARYDKSGEQHYD
Sbjct 182 EYDALLQFAAGDARKALNLIDLIASTFEPDQENLVTNAVTVKVAQQNIARYDKSGEQHYD 241
Query 241 IISAFIKSIRGSDPDAALYWMARMIKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC 300
I+SAFIKSIRGSDPDAALYWMARM+KGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC
Sbjct 242 IVSAFIKSIRGSDPDAALYWMARMLKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC 301
Query 301 FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAIDRALALAEKTANLPVPLHLRNAPT 360
FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAIDRALALAEKTANLPVPLHLRNAPT
Sbjct 302 FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAIDRALALAEKTANLPVPLHLRNAPT 361
Query 361 KLMKQQGYGADYLYPHHYPEHFVLQEYLPPELKGTKLYEFSRNKREVEGERLQQRRWQQD 420
KLMKQQGYG DYLYPHHYPEHFV QEYLPPELKGTKLYE++RNKREVEGERLQQRRWQ +
Sbjct 362 KLMKQQGYGVDYLYPHHYPEHFVEQEYLPPELKGTKLYEYARNKREVEGERLQQRRWQHE 421
Query 421 QQQ 423
QQQ
Sbjct 422 QQQ 424
>N9BZP3 Replication-associated recombination protein A [Acinetobacter
soli NIPH 2899]
Length=425
Score = 810 bits (2093), Expect = 0.0
Identities = 403/423 (95%), Positives = 416/423 (98%), Gaps = 0/423 (0%)
Query 1 MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL 60
MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL
Sbjct 2 MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL 61
Query 61 LLAQAVDRPFVSLSALNTGVKELREIIAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEK 120
LLAQAVDRPF+SLSALNTGVKELRE+IAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEK
Sbjct 62 LLAQAVDRPFISLSALNTGVKELREVIAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEK 121
Query 121 GKITLIGATTENPSFEVNSALLSRCQVYTLNVLDSAAIQNLIDRAIDSDSFLKQRHIHIE 180
GKITLIGATTENPSFEVN ALLSRCQVYTLNVLD+ AIQ LIDRA+DSD+FLK RHIHIE
Sbjct 122 GKITLIGATTENPSFEVNGALLSRCQVYTLNVLDANAIQRLIDRALDSDAFLKARHIHIE 181
Query 181 EYEALIQFAAGDARKALNLIDLIASTFEPDQENIVTNAVTVKVAQQNIARYDKSGEQHYD 240
EY+AL+QFAAGDARKALNLIDLIASTFEPDQEN+VTNAVTVKVAQQNIARYDKSGEQHYD
Sbjct 182 EYDALLQFAAGDARKALNLIDLIASTFEPDQENLVTNAVTVKVAQQNIARYDKSGEQHYD 241
Query 241 IISAFIKSIRGSDPDAALYWMARMIKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC 300
I+SAFIKSIRGSDPDAALYWMARM+KGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC
Sbjct 242 IVSAFIKSIRGSDPDAALYWMARMLKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC 301
Query 301 FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAIDRALALAEKTANLPVPLHLRNAPT 360
FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAIDRALALAEKTANLPVPLHLRNAPT
Sbjct 302 FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAIDRALALAEKTANLPVPLHLRNAPT 361
Query 361 KLMKQQGYGADYLYPHHYPEHFVLQEYLPPELKGTKLYEFSRNKREVEGERLQQRRWQQD 420
KLMKQQGYG DYLYPHHYPEHFV QEYLPPELKGTKLYE++RNKREVEGERLQQRRWQ +
Sbjct 362 KLMKQQGYGVDYLYPHHYPEHFVEQEYLPPELKGTKLYEYARNKREVEGERLQQRRWQHE 421
Query 421 QQQ 423
QQQ
Sbjct 422 QQQ 424
>A0A1P8EKW3 Replication-associated recombination protein A [Acinetobacter
soli]
Length=425
Score = 810 bits (2092), Expect = 0.0
Identities = 403/423 (95%), Positives = 415/423 (98%), Gaps = 0/423 (0%)
Query 1 MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL 60
MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL
Sbjct 2 MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL 61
Query 61 LLAQAVDRPFVSLSALNTGVKELREIIAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEK 120
LLAQAVDRPF+SLSALNTGVKELRE+IAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEK
Sbjct 62 LLAQAVDRPFISLSALNTGVKELREVIAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEK 121
Query 121 GKITLIGATTENPSFEVNSALLSRCQVYTLNVLDSAAIQNLIDRAIDSDSFLKQRHIHIE 180
GKITLIGATTENPSFEVN ALLSRCQVYTLNVLD AIQ LIDRA+DSD+FLK RHIHIE
Sbjct 122 GKITLIGATTENPSFEVNGALLSRCQVYTLNVLDENAIQRLIDRALDSDAFLKARHIHIE 181
Query 181 EYEALIQFAAGDARKALNLIDLIASTFEPDQENIVTNAVTVKVAQQNIARYDKSGEQHYD 240
EY+AL+QFAAGDARKALNLIDLIASTFEPDQEN+VTNAVTVKVAQQNIARYDKSGEQHYD
Sbjct 182 EYDALLQFAAGDARKALNLIDLIASTFEPDQENLVTNAVTVKVAQQNIARYDKSGEQHYD 241
Query 241 IISAFIKSIRGSDPDAALYWMARMIKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC 300
I+SAFIKSIRGSDPDAALYWMARM+KGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC
Sbjct 242 IVSAFIKSIRGSDPDAALYWMARMLKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC 301
Query 301 FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAIDRALALAEKTANLPVPLHLRNAPT 360
FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAIDRALALAEKTANLPVPLHLRNAPT
Sbjct 302 FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAIDRALALAEKTANLPVPLHLRNAPT 361
Query 361 KLMKQQGYGADYLYPHHYPEHFVLQEYLPPELKGTKLYEFSRNKREVEGERLQQRRWQQD 420
KLMKQQGYG DYLYPHHYPEHFV QEYLPPELKGTKLYE++RNKREVEGERLQQRRWQ +
Sbjct 362 KLMKQQGYGVDYLYPHHYPEHFVEQEYLPPELKGTKLYEYARNKREVEGERLQQRRWQHE 421
Query 421 QQQ 423
QQQ
Sbjct 422 QQQ 424
>A0A0M1I7Q3 Replication-associated recombination protein A [Acinetobacter
sp. C15]
Length=425
Score = 808 bits (2088), Expect = 0.0
Identities = 402/423 (95%), Positives = 415/423 (98%), Gaps = 0/423 (0%)
Query 1 MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL 60
MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL
Sbjct 2 MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL 61
Query 61 LLAQAVDRPFVSLSALNTGVKELREIIAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEK 120
LLAQAVDRPF+SLSALNTGVKELRE+IAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEK
Sbjct 62 LLAQAVDRPFISLSALNTGVKELREVIAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEK 121
Query 121 GKITLIGATTENPSFEVNSALLSRCQVYTLNVLDSAAIQNLIDRAIDSDSFLKQRHIHIE 180
GKITLIGATTENPSFEVN ALLSRCQVYTLNVLD+ AIQ LIDRA+DSD+FLK RHIHIE
Sbjct 122 GKITLIGATTENPSFEVNGALLSRCQVYTLNVLDANAIQRLIDRALDSDAFLKARHIHIE 181
Query 181 EYEALIQFAAGDARKALNLIDLIASTFEPDQENIVTNAVTVKVAQQNIARYDKSGEQHYD 240
EY+AL+QFAAGDARKALNLIDLIASTFEPDQEN+V NAVTVKVAQQNIARYDKSGEQHYD
Sbjct 182 EYDALLQFAAGDARKALNLIDLIASTFEPDQENLVNNAVTVKVAQQNIARYDKSGEQHYD 241
Query 241 IISAFIKSIRGSDPDAALYWMARMIKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC 300
I+SAFIKSIRGSDPDAALYWMARM+KGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC
Sbjct 242 IVSAFIKSIRGSDPDAALYWMARMLKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC 301
Query 301 FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAIDRALALAEKTANLPVPLHLRNAPT 360
FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAIDRALALAEKTANLPVPLHLRNAPT
Sbjct 302 FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAIDRALALAEKTANLPVPLHLRNAPT 361
Query 361 KLMKQQGYGADYLYPHHYPEHFVLQEYLPPELKGTKLYEFSRNKREVEGERLQQRRWQQD 420
KLMKQQGYG DYLYPHHYPEHFV QEYLPPELKGTKLYE++RNKREVEGERLQQRRWQ +
Sbjct 362 KLMKQQGYGVDYLYPHHYPEHFVEQEYLPPELKGTKLYEYARNKREVEGERLQQRRWQHE 421
Query 421 QQQ 423
QQQ
Sbjct 422 QQQ 424
>N8RI61 Replication-associated recombination protein A [Acinetobacter
parvus NIPH 1103]
Length=425
Score = 789 bits (2038), Expect = 0.0
Identities = 394/423 (93%), Positives = 411/423 (97%), Gaps = 0/423 (0%)
Query 1 MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL 60
MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL
Sbjct 2 MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL 61
Query 61 LLAQAVDRPFVSLSALNTGVKELREIIAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEK 120
LLAQAVDRPF+SLSALNTGVKELRE+IAESGDLLTPVVFIDEIHRFNKSQQDALL AVEK
Sbjct 62 LLAQAVDRPFISLSALNTGVKELREVIAESGDLLTPVVFIDEIHRFNKSQQDALLGAVEK 121
Query 121 GKITLIGATTENPSFEVNSALLSRCQVYTLNVLDSAAIQNLIDRAIDSDSFLKQRHIHIE 180
GKITLIGATTENPSFEVNSALLSRCQVYTLN LD+ AIQ LI+RAI +DSFLK+RHI IE
Sbjct 122 GKITLIGATTENPSFEVNSALLSRCQVYTLNSLDAEAIQTLINRAIQTDSFLKKRHIQIE 181
Query 181 EYEALIQFAAGDARKALNLIDLIASTFEPDQENIVTNAVTVKVAQQNIARYDKSGEQHYD 240
EY+AL+QFAAGDARKALNLIDLIASTFEPD ENIVTNA+ VKVAQQNIARYDKSGEQHYD
Sbjct 182 EYDALVQFAAGDARKALNLIDLIASTFEPDIENIVTNAIVVKVAQQNIARYDKSGEQHYD 241
Query 241 IISAFIKSIRGSDPDAALYWMARMIKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC 300
IISAFIKSIRGSDPDA LYWMARM+KGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC
Sbjct 242 IISAFIKSIRGSDPDATLYWMARMLKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC 301
Query 301 FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAIDRALALAEKTANLPVPLHLRNAPT 360
FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAI+RAL LA+KTANLPVPLHLRNAPT
Sbjct 302 FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAINRALELADKTANLPVPLHLRNAPT 361
Query 361 KLMKQQGYGADYLYPHHYPEHFVLQEYLPPELKGTKLYEFSRNKREVEGERLQQRRWQQD 420
KLMKQQGYG DYLYPH++PEHFV+QEYLPPELKGTKLYE +RNKREVEGERLQQRRWQQ+
Sbjct 362 KLMKQQGYGVDYLYPHNFPEHFVMQEYLPPELKGTKLYESARNKREVEGERLQQRRWQQE 421
Query 421 QQQ 423
QQQ
Sbjct 422 QQQ 424
>N8RIE5 Replication-associated recombination protein A [Acinetobacter
parvus DSM 16617 = CIP 108168]
Length=424
Score = 788 bits (2034), Expect = 0.0
Identities = 392/423 (93%), Positives = 411/423 (97%), Gaps = 0/423 (0%)
Query 1 MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL 60
MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL
Sbjct 2 MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL 61
Query 61 LLAQAVDRPFVSLSALNTGVKELREIIAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEK 120
LLAQAVDRPF+SLSALNTGVKELRE+IAESGDLLTP+VFIDEIHRFNKSQQDALL AVEK
Sbjct 62 LLAQAVDRPFISLSALNTGVKELREVIAESGDLLTPIVFIDEIHRFNKSQQDALLGAVEK 121
Query 121 GKITLIGATTENPSFEVNSALLSRCQVYTLNVLDSAAIQNLIDRAIDSDSFLKQRHIHIE 180
GKITLIGATTENPSFEVNSALLSRCQVYTLN LD+ AIQ LI+RAI +DSFL+QRHI IE
Sbjct 122 GKITLIGATTENPSFEVNSALLSRCQVYTLNSLDADAIQTLINRAIQTDSFLRQRHIQIE 181
Query 181 EYEALIQFAAGDARKALNLIDLIASTFEPDQENIVTNAVTVKVAQQNIARYDKSGEQHYD 240
EY+AL+QFAAGDARKALNLIDLIASTFEPD ENIVTNA+ V+VAQQNIARYDKSGEQHYD
Sbjct 182 EYDALVQFAAGDARKALNLIDLIASTFEPDIENIVTNAIVVRVAQQNIARYDKSGEQHYD 241
Query 241 IISAFIKSIRGSDPDAALYWMARMIKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC 300
IISAFIKSIRGSDPDA LYWMARM+KGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC
Sbjct 242 IISAFIKSIRGSDPDATLYWMARMLKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC 301
Query 301 FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAIDRALALAEKTANLPVPLHLRNAPT 360
FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAI+RAL LA+KTANLPVPLHLRNAPT
Sbjct 302 FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAINRALELADKTANLPVPLHLRNAPT 361
Query 361 KLMKQQGYGADYLYPHHYPEHFVLQEYLPPELKGTKLYEFSRNKREVEGERLQQRRWQQD 420
KLMKQQGYG DYLYPH++PEHFV+QEYLPPELKGTKLYE +RNKREVEGERLQQRRWQQ+
Sbjct 362 KLMKQQGYGVDYLYPHNFPEHFVMQEYLPPELKGTKLYESARNKREVEGERLQQRRWQQE 421
Query 421 QQQ 423
QQQ
Sbjct 422 QQQ 424
>N8VTY7 Replication-associated recombination protein A [Acinetobacter
sp. CIP 102529]
Length=424
Score = 788 bits (2034), Expect = 0.0
Identities = 392/423 (93%), Positives = 411/423 (97%), Gaps = 0/423 (0%)
Query 1 MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL 60
MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL
Sbjct 2 MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL 61
Query 61 LLAQAVDRPFVSLSALNTGVKELREIIAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEK 120
LLAQAVDRPF+SLSALNTGVKELRE+IAESGDLLTP+VFIDEIHRFNKSQQDALL AVEK
Sbjct 62 LLAQAVDRPFISLSALNTGVKELREVIAESGDLLTPIVFIDEIHRFNKSQQDALLGAVEK 121
Query 121 GKITLIGATTENPSFEVNSALLSRCQVYTLNVLDSAAIQNLIDRAIDSDSFLKQRHIHIE 180
GKITLIGATTENPSFEVNSALLSRCQVYTLN LD+ AIQ LI+RAI +DSFL+QRHI IE
Sbjct 122 GKITLIGATTENPSFEVNSALLSRCQVYTLNSLDADAIQTLINRAIQTDSFLRQRHIQIE 181
Query 181 EYEALIQFAAGDARKALNLIDLIASTFEPDQENIVTNAVTVKVAQQNIARYDKSGEQHYD 240
EY+AL+QFAAGDARKALNLIDLIASTFEPD ENIVTNA+ V+VAQQNIARYDKSGEQHYD
Sbjct 182 EYDALVQFAAGDARKALNLIDLIASTFEPDIENIVTNAIVVRVAQQNIARYDKSGEQHYD 241
Query 241 IISAFIKSIRGSDPDAALYWMARMIKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC 300
IISAFIKSIRGSDPDA LYWMARM+KGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC
Sbjct 242 IISAFIKSIRGSDPDATLYWMARMLKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC 301
Query 301 FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAIDRALALAEKTANLPVPLHLRNAPT 360
FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAI+RAL LA+KTANLPVPLHLRNAPT
Sbjct 302 FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAINRALELADKTANLPVPLHLRNAPT 361
Query 361 KLMKQQGYGADYLYPHHYPEHFVLQEYLPPELKGTKLYEFSRNKREVEGERLQQRRWQQD 420
KLMKQQGYG DYLYPH++PEHFV+QEYLPPELKGTKLYE +RNKREVEGERLQQRRWQQ+
Sbjct 362 KLMKQQGYGVDYLYPHNFPEHFVMQEYLPPELKGTKLYESARNKREVEGERLQQRRWQQE 421
Query 421 QQQ 423
QQQ
Sbjct 422 QQQ 424
>N8V7C3 Replication-associated recombination protein A [Acinetobacter
sp. CIP 102082]
Length=424
Score = 788 bits (2034), Expect = 0.0
Identities = 392/423 (93%), Positives = 411/423 (97%), Gaps = 0/423 (0%)
Query 1 MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL 60
MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL
Sbjct 2 MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL 61
Query 61 LLAQAVDRPFVSLSALNTGVKELREIIAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEK 120
LLAQAVDRPF+SLSALNTGVKELRE+IAESGDLLTP+VFIDEIHRFNKSQQDALL AVEK
Sbjct 62 LLAQAVDRPFISLSALNTGVKELREVIAESGDLLTPIVFIDEIHRFNKSQQDALLGAVEK 121
Query 121 GKITLIGATTENPSFEVNSALLSRCQVYTLNVLDSAAIQNLIDRAIDSDSFLKQRHIHIE 180
GKITLIGATTENPSFEVNSALLSRCQVYTLN LD+ AIQ LI+RAI +DSFL+QRHI IE
Sbjct 122 GKITLIGATTENPSFEVNSALLSRCQVYTLNSLDADAIQTLINRAIQTDSFLRQRHIQIE 181
Query 181 EYEALIQFAAGDARKALNLIDLIASTFEPDQENIVTNAVTVKVAQQNIARYDKSGEQHYD 240
EY+AL+QFAAGDARKALNLIDLIASTFEPD ENIVTNA+ V+VAQQNIARYDKSGEQHYD
Sbjct 182 EYDALVQFAAGDARKALNLIDLIASTFEPDIENIVTNAIVVRVAQQNIARYDKSGEQHYD 241
Query 241 IISAFIKSIRGSDPDAALYWMARMIKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC 300
IISAFIKSIRGSDPDA LYWMARM+KGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC
Sbjct 242 IISAFIKSIRGSDPDATLYWMARMLKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC 301
Query 301 FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAIDRALALAEKTANLPVPLHLRNAPT 360
FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAI+RAL LA+KTANLPVPLHLRNAPT
Sbjct 302 FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAINRALELADKTANLPVPLHLRNAPT 361
Query 361 KLMKQQGYGADYLYPHHYPEHFVLQEYLPPELKGTKLYEFSRNKREVEGERLQQRRWQQD 420
KLMKQQGYG DYLYPH++PEHFV+QEYLPPELKGTKLYE +RNKREVEGERLQQRRWQQ+
Sbjct 362 KLMKQQGYGVDYLYPHNFPEHFVMQEYLPPELKGTKLYESARNKREVEGERLQQRRWQQE 421
Query 421 QQQ 423
QQQ
Sbjct 422 QQQ 424
>A0A3R9DS83 Replication-associated recombination protein A [Acinetobacter
sp. FDAARGOS_515]
Length=425
Score = 787 bits (2032), Expect = 0.0
Identities = 396/423 (94%), Positives = 409/423 (97%), Gaps = 0/423 (0%)
Query 1 MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL 60
MSDTHIPLPERLRPRDLSEIIGQ+HLLG+HAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL
Sbjct 2 MSDTHIPLPERLRPRDLSEIIGQNHLLGQHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL 61
Query 61 LLAQAVDRPFVSLSALNTGVKELREIIAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEK 120
LLAQAVDRPFVSLSALNTGVKELREIIAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEK
Sbjct 62 LLAQAVDRPFVSLSALNTGVKELREIIAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEK 121
Query 121 GKITLIGATTENPSFEVNSALLSRCQVYTLNVLDSAAIQNLIDRAIDSDSFLKQRHIHIE 180
GKITLIGATTENPSFEVNSALLSRCQVYTLN LD AIQ L+++AI +DSFLK+RHI IE
Sbjct 122 GKITLIGATTENPSFEVNSALLSRCQVYTLNSLDQDAIQTLLNKAIQTDSFLKERHIQIE 181
Query 181 EYEALIQFAAGDARKALNLIDLIASTFEPDQENIVTNAVTVKVAQQNIARYDKSGEQHYD 240
EY+AL QFAAGDARKALNLIDLIASTFE D ENIVTNAVTVKVAQQNIARYDKSGEQHYD
Sbjct 182 EYDALFQFAAGDARKALNLIDLIASTFEADVENIVTNAVTVKVAQQNIARYDKSGEQHYD 241
Query 241 IISAFIKSIRGSDPDAALYWMARMIKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC 300
IISAFIKSIRGSDPDA LYWMARM+KGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC
Sbjct 242 IISAFIKSIRGSDPDATLYWMARMLKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC 301
Query 301 FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAIDRALALAEKTANLPVPLHLRNAPT 360
FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAI+RAL LAEKTANLPVPLHLRNAPT
Sbjct 302 FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAINRALELAEKTANLPVPLHLRNAPT 361
Query 361 KLMKQQGYGADYLYPHHYPEHFVLQEYLPPELKGTKLYEFSRNKREVEGERLQQRRWQQD 420
KLMKQQGYG DYLYPH+YPEHFVLQEYLPPELKG KLYE +RNKREVEGERLQQRRWQQ+
Sbjct 362 KLMKQQGYGVDYLYPHNYPEHFVLQEYLPPELKGVKLYESARNKREVEGERLQQRRWQQE 421
Query 421 QQQ 423
QQQ
Sbjct 422 QQQ 424
>A0A009YDS3 Replication-associated recombination protein A [Acinetobacter
sp. 479375]
Length=424
Score = 787 bits (2032), Expect = 0.0
Identities = 396/423 (94%), Positives = 409/423 (97%), Gaps = 0/423 (0%)
Query 1 MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL 60
MSDTHIPLPERLRPRDLSEIIGQ+HLLG+HAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL
Sbjct 1 MSDTHIPLPERLRPRDLSEIIGQNHLLGQHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL 60
Query 61 LLAQAVDRPFVSLSALNTGVKELREIIAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEK 120
LLAQAVDRPFVSLSALNTGVKELREIIAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEK
Sbjct 61 LLAQAVDRPFVSLSALNTGVKELREIIAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEK 120
Query 121 GKITLIGATTENPSFEVNSALLSRCQVYTLNVLDSAAIQNLIDRAIDSDSFLKQRHIHIE 180
GKITLIGATTENPSFEVNSALLSRCQVYTLN LD AIQ L+++AI +DSFLK+RHI IE
Sbjct 121 GKITLIGATTENPSFEVNSALLSRCQVYTLNSLDQDAIQTLLNKAIQTDSFLKERHIQIE 180
Query 181 EYEALIQFAAGDARKALNLIDLIASTFEPDQENIVTNAVTVKVAQQNIARYDKSGEQHYD 240
EY+AL QFAAGDARKALNLIDLIASTFE D ENIVTNAVTVKVAQQNIARYDKSGEQHYD
Sbjct 181 EYDALFQFAAGDARKALNLIDLIASTFEADVENIVTNAVTVKVAQQNIARYDKSGEQHYD 240
Query 241 IISAFIKSIRGSDPDAALYWMARMIKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC 300
IISAFIKSIRGSDPDA LYWMARM+KGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC
Sbjct 241 IISAFIKSIRGSDPDATLYWMARMLKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC 300
Query 301 FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAIDRALALAEKTANLPVPLHLRNAPT 360
FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAI+RAL LAEKTANLPVPLHLRNAPT
Sbjct 301 FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAINRALELAEKTANLPVPLHLRNAPT 360
Query 361 KLMKQQGYGADYLYPHHYPEHFVLQEYLPPELKGTKLYEFSRNKREVEGERLQQRRWQQD 420
KLMKQQGYG DYLYPH+YPEHFVLQEYLPPELKG KLYE +RNKREVEGERLQQRRWQQ+
Sbjct 361 KLMKQQGYGVDYLYPHNYPEHFVLQEYLPPELKGVKLYESARNKREVEGERLQQRRWQQE 420
Query 421 QQQ 423
QQQ
Sbjct 421 QQQ 423
>N8UGM5 Replication-associated recombination protein A [Acinetobacter
sp. CIP 102129]
Length=425
Score = 785 bits (2028), Expect = 0.0
Identities = 391/423 (92%), Positives = 410/423 (97%), Gaps = 0/423 (0%)
Query 1 MSDTHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL 60
MS THIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL
Sbjct 2 MSATHIPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIAL 61
Query 61 LLAQAVDRPFVSLSALNTGVKELREIIAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEK 120
LLAQAVDRPF+SLSALNTGVKELRE+IAESGDLLTPVVFIDEIHRFNKSQQDALL AVEK
Sbjct 62 LLAQAVDRPFISLSALNTGVKELREVIAESGDLLTPVVFIDEIHRFNKSQQDALLGAVEK 121
Query 121 GKITLIGATTENPSFEVNSALLSRCQVYTLNVLDSAAIQNLIDRAIDSDSFLKQRHIHIE 180
GKITLIGATTENPSFEVNSALLSRCQVYTLN LD+ AIQ LI+RAI +DSFL+QRHI IE
Sbjct 122 GKITLIGATTENPSFEVNSALLSRCQVYTLNSLDAEAIQTLINRAIQTDSFLRQRHIQIE 181
Query 181 EYEALIQFAAGDARKALNLIDLIASTFEPDQENIVTNAVTVKVAQQNIARYDKSGEQHYD 240
EY+AL+QFAAGDARKALNLIDLIASTFEPD ENIVTNA+ VKVAQQNIARYDKSGEQHYD
Sbjct 182 EYDALVQFAAGDARKALNLIDLIASTFEPDIENIVTNAIVVKVAQQNIARYDKSGEQHYD 241
Query 241 IISAFIKSIRGSDPDAALYWMARMIKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC 300
++SAFIKSIRGSDPDA LYWMARM+KGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC
Sbjct 242 LVSAFIKSIRGSDPDATLYWMARMLKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGEC 301
Query 301 FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAIDRALALAEKTANLPVPLHLRNAPT 360
FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAI+RAL LA+KTANLPVPLHLRNAPT
Sbjct 302 FRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAINRALELADKTANLPVPLHLRNAPT 361
Query 361 KLMKQQGYGADYLYPHHYPEHFVLQEYLPPELKGTKLYEFSRNKREVEGERLQQRRWQQD 420
KLMKQQGYG DYLYPH++PEHFV+QEYLPPELKGTKLYE +RNKREVEGERLQQRRWQQ+
Sbjct 362 KLMKQQGYGVDYLYPHNFPEHFVMQEYLPPELKGTKLYESARNKREVEGERLQQRRWQQE 421
Query 421 QQQ 423
QQQ
Sbjct 422 QQQ 424
>Q7WYJ7 Putative GTP-binding protein [Bifidobacterium longum subsp.
infantis]
Length=459
Score = 343 bits (880), Expect = 7e-118
Identities = 196/427 (46%), Positives = 272/427 (64%), Gaps = 21/427 (5%)
Query 7 PLPERLRPRDLSEIIGQDHLLGEHAPLRQMID---QGHLP---SIIFWGPPGVGKTTIAL 60
PL R+RPR L E+IGQ +LG+ +PLR++ + +G L S+I +GPPGVGKTT+A
Sbjct 19 PLAVRMRPRTLDEVIGQTQVLGQGSPLRRLANPASKGSLTAPSSVILFGPPGVGKTTLAT 78
Query 61 LLAQAVDRPFVSLSALNTGVKELREIIAESGDLLTP-----VVFIDEIHRFNKSQQDALL 115
++A R F LSA+ +GVK++R+++ + + L V+FIDE+HRF+KSQQDALL
Sbjct 79 IVAGQSGRVFEELSAVTSGVKDVRDVLTRAHERLVSRGQETVLFIDEVHRFSKSQQDALL 138
Query 116 NAVEKGKITLIGATTENPSFEVNSALLSRCQVYTLNVLDSAAIQNLIDRAIDSDSFLKQR 175
AVE +T IGATTENPSF + LLSR V L L+ + L+ RA+ D L+
Sbjct 139 PAVENRDVTFIGATTENPSFSIIKPLLSRSVVVKLESLEPDQLIELVQRALTDDRGLRGE 198
Query 176 HIHIEEYEA-LIQFAAGDARKALNLIDLIASTFEPDQEN-------IVTNAVTVKVAQQN 227
+E A +++ A GDARK+L +++ A D+ I+T + V
Sbjct 199 VKATDEAIADIVRMAGGDARKSLTILEAAAGAVTGDEARKKGARRPIITPEIVATVMDTA 258
Query 228 IARYDKSGEQHYDIISAFIKSIRGSDPDAALYWMARMIKGGEDPVFIARRMLIAASEDIG 287
RYDK G+ HYD+ISAFIKS+RGSDPDAA++++ARM+K GEDP FIARR++IAASE++G
Sbjct 259 TVRYDKDGDDHYDVISAFIKSMRGSDPDAAIHYLARMLKAGEDPRFIARRIMIAASEEVG 318
Query 288 NSNPNALLLAGECFRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLAIDRALALAEKTA 347
+ P L + ++V VGMPEARIIL + + +AT+PKSN++Y AI++ALA +
Sbjct 319 MAAPQILQVTVAAAQAVALVGMPEARIILAEATIAVATAPKSNASYNAINQALADVDAGK 378
Query 348 NLPVPLHLRNAPTKLMKQQGYGADYLYPHHYPEHFVLQEYLPPELKGTKLYEFSRNKREV 407
VPL+LRNAPTKLMK+ G Y Y H +P QEY+P EL+GT+ Y N R
Sbjct 379 IGAVPLYLRNAPTKLMKEWGNHEGYKYAHDWPGAVAPQEYMPEELRGTEYYH--PNDRGY 436
Query 408 EGERLQQ 414
E E Q+
Sbjct 437 EHEVSQR 443
>Q50JE6 Werner helicase interacting protein 1 [Xenopus laevis]
Length=572
Score = 318 bits (815), Expect = 1e-106
Identities = 180/421 (43%), Positives = 262/421 (62%), Gaps = 34/421 (8%)
Query 7 PLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIALLLAQAV 66
PL +++RP L+ +GQ+ +LGE+ LR ++ +PSII WGPPG GKTT+A ++A+
Sbjct 149 PLADKMRPTTLNNYMGQNKVLGENTMLRNLLQANDIPSIILWGPPGCGKTTLAHIIAKNA 208
Query 67 DRP---FVSLSALNTGVKELREIIAESGD-----LLTPVVFIDEIHRFNKSQQDALLNAV 118
+ FV+LSA + ++RE I ++ + ++F+DEIHRFNK QQD L V
Sbjct 209 QKSSSRFVTLSATSASTSDVREFIKQAQNEQRLFKRKTILFVDEIHRFNKMQQDTFLPHV 268
Query 119 EKGKITLIGATTENPSFEVNSALLSRCQVYTLNVLDSAAIQNLIDRAIDS---------- 168
E G ITLIGATTENPSF+VN+ALLSRC+V L L A++ ++ RA+DS
Sbjct 269 ECGTITLIGATTENPSFQVNTALLSRCRVIVLEKLSVEAMETILMRAVDSLGLKVLKDGE 328
Query 169 -----DSFLKQRHIHIEE--YEALIQFAAGDARKALNLIDL-----IASTFEPDQENIVT 216
S + + +++EE L GDAR LN + L +A+ +P ++ IV
Sbjct 329 QLVGSSSDVSETSVYVEEKALTTLAHLCDGDARTGLNGLQLSVQASLAAEKDPIKQGIVI 388
Query 217 NAVTVKVA-QQNIARYDKSGEQHYDIISAFIKSIRGSDPDAALYWMARMIKGGEDPVFIA 275
+K Q++ YD++GE+HY+ ISA KS+RGSD +A+LYW+ RM++GGEDP+++A
Sbjct 389 KEEHIKEGLQRSHILYDRAGEEHYNCISALHKSMRGSDKNASLYWLGRMLEGGEDPLYVA 448
Query 276 RRMLIAASEDIGNSNPNALLLAGECFRSVQAVGMPEARIILGQCAVYLATSPKSNSTYLA 335
RR++ ASEDIG ++P AL A +++ +GMPE +IL QC +Y+A +PKS + Y A
Sbjct 449 RRLVRFASEDIGLADPQALTQAVSTYQACHFIGMPECDVILAQCVMYMACAPKSVTVYSA 508
Query 336 IDRALALAE--KTANLPVPLHLRNAPTKLMKQQGYGADYLYPHHYPEHFVLQEYLPPELK 393
++ + K PVPLHLRNAPTKLMK GYG Y Y ++ E V Q+Y+P E+K
Sbjct 509 YNKVKNCLKNHKGPLPPVPLHLRNAPTKLMKGLGYGKGYKYNPNFSEP-VEQDYMPEEMK 567
Query 394 G 394
G
Sbjct 568 G 568
>Q6QN33 AAA type ATPase [Aster yellows witches'-broom phytoplasma]
Length=414
Score = 219 bits (559), Expect = 2e-70
Identities = 130/390 (33%), Positives = 222/390 (57%), Gaps = 11/390 (3%)
Query 7 PLPERLRPRDLSEIIGQDHLLGE-HAPLRQMIDQGHLPSIIFWGPPGVGKTTIALLLAQA 65
PL LRP +++IIGQ HL+ + + + +M+ + S+IF+G PG+GK+++A +LA
Sbjct 5 PLAFALRPSTITDIIGQSHLINDQNGIISRMLKNNYASSLIFYGVPGIGKSSLAQVLAND 64
Query 66 VDRPFVSLSALNTGVKELREIIAESGDLLTPVVFIDEIHRFNKSQQDALLNAVEKGKITL 125
+ + +A +L +II ++ + ++ I+EIHR NK +QD LL +E G + +
Sbjct 65 LQIKYDIFNAAIDKKSKLEKIIQQALNFKKFILIIEEIHRMNKDRQDILLQYLENGHLIM 124
Query 126 IGATTENPSFEVNSALLSRCQVYTLNVLDSAAIQNLIDRAIDSDSFLKQRHIHIEEYEAL 185
TTENP F +N ++ SR + L + + + +++ I + K+ ++I + L
Sbjct 125 FACTTENPYFVINPSIRSRVNIIKLERITTEEMLTGLNKLIVN----KKLPLNILQDALL 180
Query 186 I--QFAAGDARKALNLIDLIASTFEPDQENIVTNAVTVKVAQQNIARYDKSGEQHYDIIS 243
+ Q ++GD R A+N+++L + P +E +T + K++ K ++H+++ S
Sbjct 181 LICQLSSGDLRIAINMLELCLHLY-PGEE--ITKKIIKKISSSANLINFKDNDEHHNLKS 237
Query 244 AFIKSIRGSDPDAALYWMARMIKGGEDPVFIARRMLIAASEDIGNSNPNALLLAGECFRS 303
A KSIRGSD DAAL++ AR++ G+ I RRMLI A EDIG +NP ++ +
Sbjct 238 ALQKSIRGSDVDAALHYFARLLASGDHEALI-RRMLITAYEDIGLANPMIIIHVKTAIDA 296
Query 304 VQAVGMPEARIILGQCAVYLATSPKSNSTYLAIDRALALAEKTANLPVPLHLRNAPTKLM 363
+ +G+PE RI LG + + S KSNS YLA ++A + +P HL++
Sbjct 297 FRQIGLPEGRIPLGLAIIEMCLSEKSNSAYLASNKAYEDVLQGNVFNIPKHLQDTSYNSA 356
Query 364 KQQGYGADYLYPHHYPEHFVLQEYLPPELK 393
+ G G DY YPH++P ++V Q+YLP E+K
Sbjct 357 SKLGIGFDYKYPHNFPNNYVNQQYLPQEIK 386
>H9CDQ8 RarA [Listeria rocourtiae]
Length=289
Score = 191 bits (486), Expect = 4e-61
Identities = 115/287 (40%), Positives = 174/287 (61%), Gaps = 10/287 (3%)
Query 35 QMIDQGHLPSIIFWGPPGVGKTTIALLLAQAVDRPFVSLSALNTGVKELREIIAESGDLL 94
+M+ L S+I +GPPG+GKT+IA +A + F L+A+ K+L + AE+
Sbjct 5 RMVKAKQLSSMILYGPPGIGKTSIASAIAGSTKYAFRMLNAVTNNKKDLEIVAAEAKMSG 64
Query 95 TPVVFIDEIHRFNKSQQDALLNAVEKGKITLIGATTENPSFEVNSALLSRCQVYTLNVLD 154
T ++ +DE+HR +K +QD LL +E G+I LIGATT NP +N A+ SR Q++ L L
Sbjct 65 TVILLLDEVHRLDKPKQDFLLPHLESGQIILIGATTSNPYIAINPAIRSRTQIFELKPLS 124
Query 155 SAAIQNLIDRA-IDSDSFLKQRHIHI--EEYEALIQFAAGDARKALNLIDLIASTFEPDQ 211
A I+ +DRA +D + L + + + L + GD R ALN ++L + EPD
Sbjct 125 VADIEVTMDRALVDLERGLGAYEVVLDGDAKTHLATASNGDVRSALNALELAVISSEPDD 184
Query 212 ENIVTNAVTVKVAQQNIAR----YDKSGEQHYDIISAFIKSIRGSDPDAALYWMARMIKG 267
V VT++VA++ + R +DK G+ HYD++SAF KS+RGSD +AAL++M R+I+
Sbjct 185 VGQV--HVTLEVAEECLQRKSLAHDKDGDAHYDVLSAFQKSVRGSDVNAALHYMGRLIEA 242
Query 268 GEDPVFIARRMLIAASEDIGNSNPNALLLAGECFRSVQAVGMPEARI 314
G D V I+RR+L+ A EDIG +NP A ++ + +G PEARI
Sbjct 243 G-DLVSISRRLLVMAYEDIGLANPQAATHTLSAIQTAEKIGFPEARI 288
>Q9VKW3 Replication factor C subunit 3 [Drosophila melanogaster]
Length=332
Score = 69.3 bits (168), Expect = 4e-16
Identities = 59/234 (25%), Positives = 103/234 (44%), Gaps = 22/234 (9%)
Query 6 IPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIALLLAQA 65
+P E+ RP L ++I + ++ + + + I + LP ++F+GPPG GKT+ L A+
Sbjct 11 MPWVEKYRPSGLDDLISHEEII---STITRFISRKQLPHLLFYGPPGTGKTSTILACARQ 67
Query 66 VDRP--FVSLSALNTGVKELREIIAESGDLL----TPVVFIDEIHRFNKSQQDALLNAVE 119
+ P F S+ L + R I G +L T +F D + DA+ N +
Sbjct 68 LYSPQQFKSM-VLELNASDDRGIGIVRGQILNFASTRTIFCDTFKLIILDEADAMTNDAQ 126
Query 120 KGKITLIGATTENPSF--------EVNSALLSRCQVYTLNVLDSAAIQNLIDRAIDSDSF 171
+I T+N F ++ AL SRC + L + +++ I++++
Sbjct 127 NALRRIIEKYTDNVRFCVICNYLSKIIPALQSRCTRFRFAPLSQDQMMPRLEKIIEAEAV 186
Query 172 LKQRHIHIEEYEALIQFAAGDARKALNLIDLIASTFEPDQENIVTNAVTVKVAQ 225
I + AL+ A GD RK LN++ F+ E+ V V + Q
Sbjct 187 ----QITEDGKRALLTLAKGDMRKVLNVLQSTVMAFDTVNEDNVYMCVGYPLRQ 236
>Q76LD2 RFC2 protein [Xenopus laevis]
Length=363
Score = 62.0 bits (149), Expect = 1e-13
Identities = 65/271 (24%), Positives = 115/271 (42%), Gaps = 39/271 (14%)
Query 6 IPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIALLLAQA 65
IP E+ RP+ + E+ QD ++ A L++ + LP+++F+GPPG GKT+ L ++
Sbjct 37 IPWVEKYRPKCVDEVAFQDEVV---AVLKKSLQGADLPNLLFYGPPGTGKTSTILAASRE 93
Query 66 VDRP------FVSLSALN-TGVKELREIIAESGDLLT-------------PVVFIDEIHR 105
+ P + L+A + G++ +RE + L ++ +DE
Sbjct 94 LYGPELFRQRVLELNASDERGIQVVREKVKNFAQLTVGGTRSDGKPCPPFKIIILDEADS 153
Query 106 FNKSQQDALLNAVEKGKITLIGATTENPSFEVNSALLSRCQVYTLNVL-DSAAIQNLIDR 164
+ Q AL +EK T N + L SRC + L D Q L+
Sbjct 154 MTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLADKIQTQRLL-- 211
Query 165 AIDSDSFLKQRHIHI--EEYEALIQFAAGDARKALNLIDLIASTFEPDQ--ENIVTN--A 218
S ++ ++ I E L++ + GD RKA+ + A + E IVT
Sbjct 212 -----SICEKENVQITNEAISCLVEVSEGDLRKAITFLQSAARLTRGKEITEEIVTEIAG 266
Query 219 VTVKVAQQNIARYDKSGEQHYDIISAFIKSI 249
V K ++ +SG ++ + F+K +
Sbjct 267 VVPKETLDSVLVVCQSGS--FEKLENFVKDL 295
>Q6DRF4 Replication factor C subunit 4 [Danio rerio]
Length=358
Score = 60.5 bits (145), Expect = 4e-13
Identities = 56/239 (23%), Positives = 102/239 (43%), Gaps = 30/239 (13%)
Query 6 IPLPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLPSIIFWGPPGVGKTTIALLLAQA 65
+P E+ RP+ + E+ Q+ ++ A L++ ++ LP+++F+GPPG GKT+ L A+
Sbjct 33 VPWVEKYRPKCVDEVAFQEEVV---AVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARE 89
Query 66 VDRP------FVSLSALN-TGVKELREIIAESGDLLT-------------PVVFIDEIHR 105
+ P + L+A + G++ +RE + L ++ +DE
Sbjct 90 LYGPDLYRQRVLELNASDERGIQVVREKVKRFAQLTVAGTRPDGKTCPPFKIIILDEADS 149
Query 106 FNKSQQDALLNAVEKGKITLIGATTENPSFEVNSALLSRCQVYTLNVLDSAAIQNLIDRA 165
+ Q AL +EK T N + L SRC + L + Q I
Sbjct 150 MTSAAQAALRRTMEKESRTTRFCLICNYVSRIIEPLTSRCSKFRFKPLANDVQQERILEI 209
Query 166 IDSDSFLKQRHIHIEEYEALIQFAAGDARKALNLIDLIASTFEPDQENIVTNAVTVKVA 224
++ E +AL++ + GD RKA I + S + E +T +++A
Sbjct 210 CRKENL----KYTTEGVDALVRVSEGDLRKA---ITFLQSGARLNSEREITEQTIIEIA 261
Score = 24.6 bits (52), Expect = 0.10
Identities = 24/92 (26%), Positives = 41/92 (45%), Gaps = 11/92 (12%)
Query 91 GDLLTPVVFIDEIHRFNKSQQDALLNAVEKGKITLIGATTENPSFEVNSALLSRCQVYTL 150
GDL + F+ R N ++ E+ I + G +V +LL C T
Sbjct 231 GDLRKAITFLQSGARLNSERE-----ITEQTIIEIAGVVPP----KVIQSLLHICYKGTF 281
Query 151 NVLDSAAIQNLIDRAIDSDSFLKQRH-IHIEE 181
L+ A++++ID+ + + L Q H + IEE
Sbjct 282 EKLE-VAVKDMIDQGYAATNLLNQLHDVIIEE 312
>O31001 DNA polymerase III subunit gamma/tau [Thermus thermophilus]
Length=529
Score = 58.9 bits (141), Expect = 2e-12
Identities = 69/225 (31%), Positives = 98/225 (44%), Gaps = 41/225 (18%)
Query 8 LPERLRPRDLSEIIGQDHLLGEHAPLRQMIDQGHLP-SIIFWGPPGVGKTTIALLLAQAV 66
L R RP E++GQ+H+ PL + I +G L + +F GP GVGKTT A LLA AV
Sbjct 4 LYRRFRPLTFQEVVGQEHV---KEPLLKAIREGRLAQAYLFSGPRGVGKTTTARLLAMAV 60
Query 67 -----DRP-----------------FVSLSALNTG----VKELREIIAESGDLLTP--VV 98
D P V + A + V+ELRE I L P V
Sbjct 61 GCQGEDPPCGVCPHCQAVQRGAHPDVVEIDAASNNSVEDVRELRERI-HLAPLSAPRKVF 119
Query 99 FIDEIHRFNKSQQDALLNAVEK--GKITLIGATTENPSFEVNSALLSRCQVYTLNVLDSA 156
+DE H +KS +ALL +E+ + + ATTE + +LSR Q + L
Sbjct 120 ILDEAHMLSKSAFNALLKTLEEPPPHVLFVFATTEPE--RMPPTILSRTQHFRFRRLTEE 177
Query 157 AIQNLIDRAIDSDSFLKQRHIHIEEYEALIQFAAGDARKALNLID 201
I + R +++ R E L + A G R A +L++
Sbjct 178 EIAFKLRRILEAVG----REAEEEALLLLARLADGALRDAESLLE 218
>A0A0M9ACL9 DNA polymerase III subunit gamma/tau [Thermus aquaticus]
Length=540
Score = 57.0 bits (136), Expect = 8e-12
Identities = 59/187 (32%), Positives = 86/187 (46%), Gaps = 39/187 (21%)
Query 13 RPRDLSEIIGQDHLLGEHAPLRQMIDQGHLP-SIIFWGPPGVGKTTIALLLAQAV----- 66
RP E++GQ+H+ PL + I +G L + +F GP GVGKTT A LLA AV
Sbjct 9 RPLTFQEVVGQEHV---KEPLLRAIREGRLAQAYLFSGPRGVGKTTTARLLAMAVGCQGP 65
Query 67 DRP-----------------FVSL-SALNTGVKELREIIAESGDLLTP------VVFIDE 102
+RP V + +A N V+++RE+ LL P V +DE
Sbjct 66 ERPCGVCPHCQAVQKGAHPDVVEIDAASNNSVEDVREL--RERILLAPLTAPKKVFILDE 123
Query 103 IHRFNKSQQDALLNAVEK--GKITLIGATTENPSFEVNSALLSRCQVYTLNVLDSAAIQN 160
H +KS +ALL +E+ + + ATTE + +LSR Q Y L I
Sbjct 124 AHMLSKSAFNALLKTLEEPPPHVLFVFATTEPE--RMPPTILSRVQHYRFRRLREEEIAL 181
Query 161 LIDRAID 167
+ R ++
Sbjct 182 KLRRILE 188
Lambda K H a alpha
0.320 0.136 0.394 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3044797
Database: 140e4db2d37815dca67c94c1b2d08547.TrEMBL.fasta
Posted date: Jun 1, 2024 12:02 PM
Number of letters in database: 9,373
Number of sequences in database: 22
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
