BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: c4b5080d7915dbf77be08873271e6127.TrEMBL.fasta
22 sequences; 5,914 total letters
Query= ACIAD3526
Length=286
Score E
Sequences producing significant alignments: (Bits) Value
Q6F6Z5 Catabolite repression control protein [Acinetobacter bayly... 598 0.0
A0A7G2SAF0 Exodeoxyribonuclease III [Acinetobacter sp] 577 0.0
A0A1P8EKN2 Exodeoxyribonuclease III [Acinetobacter soli] 561 0.0
N9AK44 Exodeoxyribonuclease III [Acinetobacter soli NIPH 2899] 561 0.0
A0A0M1I7U8 DNA-(Apurinic or apyrimidinic site) lyase [Acinetobact... 558 0.0
A0A3A8EZ83 Exodeoxyribonuclease III [Acinetobacter guerrae] 551 0.0
A0A3R9D8G7 Exodeoxyribonuclease III [Acinetobacter sp. FDAARGOS_515] 549 0.0
A0A009YM57 Exodeoxyribonuclease III [Acinetobacter sp. 479375] 549 0.0
N9BX91 Exodeoxyribonuclease III [Acinetobacter ursingii ANC 3649] 549 0.0
A0A3G9FTH9 Exodeoxyribonuclease III [Acinetobacter ursingii] 549 0.0
A0A3D2SNZ4 Exodeoxyribonuclease III [Acinetobacter ursingii] 548 0.0
A0A7T9Z875 Exodeoxyribonuclease III [Acinetobacter ursingii] 546 0.0
Q7DD47 Exodeoxyribonuclease [Neisseria meningitidis serogroup B (... 246 5e-85
B2BSQ7 Exodeoxyribonuclease III [Legionella pneumophila] 239 3e-82
A0A8B6X760 Exodeoxyribonuclease III [Derxia gummosa DSM 723] 237 3e-81
Q51380 Catabolite repression control protein [Pseudomonas aerugin... 212 1e-71
Q09HU8 Exodeoxyribonuclease [Streptomyces coelicolor (strain ATCC... 205 9e-69
Q9RXF9 Exodeoxyribonuclease III [Deinococcus radiodurans (strain ... 187 2e-61
D7NZI6 AmpN [Stenotrophomonas maltophilia] 180 1e-59
C8CEB5 Catabolite repression control protein [Pseudomonas aerugin... 152 3e-49
Q6IP62 DNA-(apurinic or apyrimidinic site) endonuclease [Xenopus ... 142 1e-43
A0A8M1P554 DNA-(apurinic or apyrimidinic site) endonuclease [Dani... 139 2e-42
>Q6F6Z5 Catabolite repression control protein [Acinetobacter baylyi
(strain ATCC 33305 / BD413 / ADP1)]
Length=285
Score = 598 bits (1543), Expect = 0.0
Identities = 284/285 (99%), Positives = 285/285 (100%), Gaps = 0/285 (0%)
Query 1 VLQIHQLRSNLRMIPKDSYPSDVKILRVVSINVNGLRSSVTKGLLEWLEKSEADVICMQE 60
+LQIHQLRSNLRMIPKDSYPSDVKILRVVSINVNGLRSSVTKGLLEWLEKSEADVICMQE
Sbjct 1 MLQIHQLRSNLRMIPKDSYPSDVKILRVVSINVNGLRSSVTKGLLEWLEKSEADVICMQE 60
Query 61 SRITHAQWTDKFKPEGWYTHLFPAERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIA 120
SRITHAQWTDKFKPEGWYTHLFPAERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIA
Sbjct 61 SRITHAQWTDKFKPEGWYTHLFPAERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIA 120
Query 121 AEFDLGLNQPAYICSLYLPSGSSGDEAQARKDVFLEKYAQILKQWRDENKSIIVCGDYNI 180
AEFDLGLNQPAYICSLYLPSGSSGDEAQARKDVFLEKYAQILKQWRDENKSIIVCGDYNI
Sbjct 121 AEFDLGLNQPAYICSLYLPSGSSGDEAQARKDVFLEKYAQILKQWRDENKSIIVCGDYNI 180
Query 181 VHKRIDIKNWSGNQKSSGCLPHERAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQAR 240
VHKRIDIKNWSGNQKSSGCLPHERAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQAR
Sbjct 181 VHKRIDIKNWSGNQKSSGCLPHERAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQAR 240
Query 241 AKNVGWRIDYHACSPDWKTRTVNAWVYRDEWYSDHAPVIIDYKIS 285
AKNVGWRIDYHACSPDWKTRTVNAWVYRDEWYSDHAPVIIDYKIS
Sbjct 241 AKNVGWRIDYHACSPDWKTRTVNAWVYRDEWYSDHAPVIIDYKIS 285
>A0A7G2SAF0 Exodeoxyribonuclease III [Acinetobacter sp]
Length=273
Score = 577 bits (1488), Expect = 0.0
Identities = 273/273 (100%), Positives = 273/273 (100%), Gaps = 0/273 (0%)
Query 13 MIPKDSYPSDVKILRVVSINVNGLRSSVTKGLLEWLEKSEADVICMQESRITHAQWTDKF 72
MIPKDSYPSDVKILRVVSINVNGLRSSVTKGLLEWLEKSEADVICMQESRITHAQWTDKF
Sbjct 1 MIPKDSYPSDVKILRVVSINVNGLRSSVTKGLLEWLEKSEADVICMQESRITHAQWTDKF 60
Query 73 KPEGWYTHLFPAERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGLNQPAY 132
KPEGWYTHLFPAERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGLNQPAY
Sbjct 61 KPEGWYTHLFPAERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGLNQPAY 120
Query 133 ICSLYLPSGSSGDEAQARKDVFLEKYAQILKQWRDENKSIIVCGDYNIVHKRIDIKNWSG 192
ICSLYLPSGSSGDEAQARKDVFLEKYAQILKQWRDENKSIIVCGDYNIVHKRIDIKNWSG
Sbjct 121 ICSLYLPSGSSGDEAQARKDVFLEKYAQILKQWRDENKSIIVCGDYNIVHKRIDIKNWSG 180
Query 193 NQKSSGCLPHERAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHA 252
NQKSSGCLPHERAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHA
Sbjct 181 NQKSSGCLPHERAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHA 240
Query 253 CSPDWKTRTVNAWVYRDEWYSDHAPVIIDYKIS 285
CSPDWKTRTVNAWVYRDEWYSDHAPVIIDYKIS
Sbjct 241 CSPDWKTRTVNAWVYRDEWYSDHAPVIIDYKIS 273
>A0A1P8EKN2 Exodeoxyribonuclease III [Acinetobacter soli]
Length=273
Score = 561 bits (1447), Expect = 0.0
Identities = 260/273 (95%), Positives = 271/273 (99%), Gaps = 0/273 (0%)
Query 13 MIPKDSYPSDVKILRVVSINVNGLRSSVTKGLLEWLEKSEADVICMQESRITHAQWTDKF 72
MIPKD YPSDVKILRVVSINVNGLR+SVTKGLLEWLEKSEADV+CMQESRITHAQWTDKF
Sbjct 1 MIPKDQYPSDVKILRVVSINVNGLRASVTKGLLEWLEKSEADVVCMQESRITHAQWTDKF 60
Query 73 KPEGWYTHLFPAERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGLNQPAY 132
KPEGWYTHLFPAERAGYAGTAIYSRIPF++VQDGLGFELADSQGRFIAAEFDLGL QPAY
Sbjct 61 KPEGWYTHLFPAERAGYAGTAIYSRIPFRAVQDGLGFELADSQGRFIAAEFDLGLEQPAY 120
Query 133 ICSLYLPSGSSGDEAQARKDVFLEKYAQILKQWRDENKSIIVCGDYNIVHKRIDIKNWSG 192
+CSLYLPSGSSGDEAQARKDVFLE+YAQILKQWRDENKSIIVCGDYNIVHKRIDIKNWSG
Sbjct 121 VCSLYLPSGSSGDEAQARKDVFLEQYAQILKQWRDENKSIIVCGDYNIVHKRIDIKNWSG 180
Query 193 NQKSSGCLPHERAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHA 252
NQKSSGCLPHERAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHA
Sbjct 181 NQKSSGCLPHERAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHA 240
Query 253 CSPDWKTRTVNAWVYRDEWYSDHAPVIIDYKIS 285
CSPDWK+RTVNAWVY+DEW+SDHAPVI+DY+IS
Sbjct 241 CSPDWKSRTVNAWVYKDEWFSDHAPVIVDYQIS 273
>N9AK44 Exodeoxyribonuclease III [Acinetobacter soli NIPH 2899]
Length=273
Score = 561 bits (1446), Expect = 0.0
Identities = 259/273 (95%), Positives = 271/273 (99%), Gaps = 0/273 (0%)
Query 13 MIPKDSYPSDVKILRVVSINVNGLRSSVTKGLLEWLEKSEADVICMQESRITHAQWTDKF 72
MIPKD YPSDVKILRVVSINVNGLR+SVTKGLLEWLEKSEADV+CMQESRITHAQWTDKF
Sbjct 1 MIPKDQYPSDVKILRVVSINVNGLRASVTKGLLEWLEKSEADVVCMQESRITHAQWTDKF 60
Query 73 KPEGWYTHLFPAERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGLNQPAY 132
KPEGWYTHLFPAERAGYAGTAIYSRIPF++VQDGLGFELADSQGRFIAAEFDLGL QPAY
Sbjct 61 KPEGWYTHLFPAERAGYAGTAIYSRIPFRAVQDGLGFELADSQGRFIAAEFDLGLEQPAY 120
Query 133 ICSLYLPSGSSGDEAQARKDVFLEKYAQILKQWRDENKSIIVCGDYNIVHKRIDIKNWSG 192
+CSLYLPSGSSGDEAQARKDVFLE+YAQILKQWRDENKSIIVCGDYNIVHKRIDIKNWSG
Sbjct 121 VCSLYLPSGSSGDEAQARKDVFLEQYAQILKQWRDENKSIIVCGDYNIVHKRIDIKNWSG 180
Query 193 NQKSSGCLPHERAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHA 252
NQKSSGCLPHERAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHA
Sbjct 181 NQKSSGCLPHERAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHA 240
Query 253 CSPDWKTRTVNAWVYRDEWYSDHAPVIIDYKIS 285
CSPDWK+RTVNAWVY+DEW+SDHAP+I+DY+IS
Sbjct 241 CSPDWKSRTVNAWVYKDEWFSDHAPIIVDYQIS 273
>A0A0M1I7U8 DNA-(Apurinic or apyrimidinic site) lyase [Acinetobacter
sp. C15]
Length=273
Score = 558 bits (1437), Expect = 0.0
Identities = 259/273 (95%), Positives = 270/273 (99%), Gaps = 0/273 (0%)
Query 13 MIPKDSYPSDVKILRVVSINVNGLRSSVTKGLLEWLEKSEADVICMQESRITHAQWTDKF 72
MIPKD YPSDVKILRVVSINVNGLR+SVTKGLLEWLEKSEADV+CMQESRITHAQWTDKF
Sbjct 1 MIPKDQYPSDVKILRVVSINVNGLRASVTKGLLEWLEKSEADVVCMQESRITHAQWTDKF 60
Query 73 KPEGWYTHLFPAERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGLNQPAY 132
KPEGWYTHLFPAERAGYAGTAIYSRIPF++VQDGLGFELADSQGRFIAAEFDLGL QPAY
Sbjct 61 KPEGWYTHLFPAERAGYAGTAIYSRIPFRAVQDGLGFELADSQGRFIAAEFDLGLEQPAY 120
Query 133 ICSLYLPSGSSGDEAQARKDVFLEKYAQILKQWRDENKSIIVCGDYNIVHKRIDIKNWSG 192
+CSLYLPSGSSGDEAQARKDVFLE+YAQILKQWRDENKSIIVCGDYNIVHKRIDIKNWSG
Sbjct 121 VCSLYLPSGSSGDEAQARKDVFLEQYAQILKQWRDENKSIIVCGDYNIVHKRIDIKNWSG 180
Query 193 NQKSSGCLPHERAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHA 252
NQKSSGCL HERAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHA
Sbjct 181 NQKSSGCLLHERAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHA 240
Query 253 CSPDWKTRTVNAWVYRDEWYSDHAPVIIDYKIS 285
CSPDWK+RTVNAWVY+DEW+SDHAPVI+DY+IS
Sbjct 241 CSPDWKSRTVNAWVYKDEWFSDHAPVIVDYQIS 273
>A0A3A8EZ83 Exodeoxyribonuclease III [Acinetobacter guerrae]
Length=273
Score = 551 bits (1419), Expect = 0.0
Identities = 258/272 (95%), Positives = 266/272 (98%), Gaps = 0/272 (0%)
Query 13 MIPKDSYPSDVKILRVVSINVNGLRSSVTKGLLEWLEKSEADVICMQESRITHAQWTDKF 72
MIPKD YPSDVKILRVVSINVNGLRSSVTKGLLEWLEKSEADV+CMQESRITHAQWTDKF
Sbjct 1 MIPKDRYPSDVKILRVVSINVNGLRSSVTKGLLEWLEKSEADVVCMQESRITHAQWTDKF 60
Query 73 KPEGWYTHLFPAERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGLNQPAY 132
KPEGWYTHLFPAERAGYAGTAIYSR+PFKSVQDGLGFELADSQGRFIAAEFDLGL+Q AY
Sbjct 61 KPEGWYTHLFPAERAGYAGTAIYSRVPFKSVQDGLGFELADSQGRFIAAEFDLGLDQSAY 120
Query 133 ICSLYLPSGSSGDEAQARKDVFLEKYAQILKQWRDENKSIIVCGDYNIVHKRIDIKNWSG 192
ICSLYLPSGSSGDEAQARKDVFLE+YA ILKQWR ENKSIIVCGDYNIVHKRIDIKNWSG
Sbjct 121 ICSLYLPSGSSGDEAQARKDVFLEQYANILKQWRAENKSIIVCGDYNIVHKRIDIKNWSG 180
Query 193 NQKSSGCLPHERAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHA 252
NQKSSGCLPHERAWLDHIYD+LGYVDTFREVR EAELYSWWSNRGQARAKNVGWRIDYHA
Sbjct 181 NQKSSGCLPHERAWLDHIYDDLGYVDTFREVRQEAELYSWWSNRGQARAKNVGWRIDYHA 240
Query 253 CSPDWKTRTVNAWVYRDEWYSDHAPVIIDYKI 284
CSPDWK RTVNAWVY++EW+SDHAPVIIDYKI
Sbjct 241 CSPDWKDRTVNAWVYKEEWFSDHAPVIIDYKI 272
>A0A3R9D8G7 Exodeoxyribonuclease III [Acinetobacter sp. FDAARGOS_515]
Length=273
Score = 549 bits (1414), Expect = 0.0
Identities = 257/272 (94%), Positives = 266/272 (98%), Gaps = 0/272 (0%)
Query 13 MIPKDSYPSDVKILRVVSINVNGLRSSVTKGLLEWLEKSEADVICMQESRITHAQWTDKF 72
MIPKD YPSDVKILRVVSINVNGLRSSVTKGLLEWLE+SEADV+CMQESRITHAQWTDKF
Sbjct 1 MIPKDRYPSDVKILRVVSINVNGLRSSVTKGLLEWLEQSEADVVCMQESRITHAQWTDKF 60
Query 73 KPEGWYTHLFPAERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGLNQPAY 132
KPEGWYTHLFPAERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGL+Q AY
Sbjct 61 KPEGWYTHLFPAERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGLDQSAY 120
Query 133 ICSLYLPSGSSGDEAQARKDVFLEKYAQILKQWRDENKSIIVCGDYNIVHKRIDIKNWSG 192
ICSLYLPSGSSGDEAQARKDVFLE+YA ILKQWR ENKSIIVCGDYNIVHKRIDIKNWSG
Sbjct 121 ICSLYLPSGSSGDEAQARKDVFLEQYAHILKQWRTENKSIIVCGDYNIVHKRIDIKNWSG 180
Query 193 NQKSSGCLPHERAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHA 252
NQKSSGCLPHERAWLDHIYD+LGYVDTFREVR EAELYSWWSNRGQARAKNVGWRIDYHA
Sbjct 181 NQKSSGCLPHERAWLDHIYDDLGYVDTFREVRQEAELYSWWSNRGQARAKNVGWRIDYHA 240
Query 253 CSPDWKTRTVNAWVYRDEWYSDHAPVIIDYKI 284
CSPDWK RTVNAWVY+++W+SDHAPVIIDYKI
Sbjct 241 CSPDWKERTVNAWVYKEQWFSDHAPVIIDYKI 272
>A0A009YM57 Exodeoxyribonuclease III [Acinetobacter sp. 479375]
Length=273
Score = 549 bits (1414), Expect = 0.0
Identities = 257/272 (94%), Positives = 266/272 (98%), Gaps = 0/272 (0%)
Query 13 MIPKDSYPSDVKILRVVSINVNGLRSSVTKGLLEWLEKSEADVICMQESRITHAQWTDKF 72
MIPKD YPSDVKILRVVSINVNGLRSSVTKGLLEWLE+SEADV+CMQESRITHAQWTDKF
Sbjct 1 MIPKDRYPSDVKILRVVSINVNGLRSSVTKGLLEWLEQSEADVVCMQESRITHAQWTDKF 60
Query 73 KPEGWYTHLFPAERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGLNQPAY 132
KPEGWYTHLFPAERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGL+Q AY
Sbjct 61 KPEGWYTHLFPAERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGLDQSAY 120
Query 133 ICSLYLPSGSSGDEAQARKDVFLEKYAQILKQWRDENKSIIVCGDYNIVHKRIDIKNWSG 192
ICSLYLPSGSSGDEAQARKDVFLE+YA ILKQWR ENKSIIVCGDYNIVHKRIDIKNWSG
Sbjct 121 ICSLYLPSGSSGDEAQARKDVFLEQYAHILKQWRTENKSIIVCGDYNIVHKRIDIKNWSG 180
Query 193 NQKSSGCLPHERAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHA 252
NQKSSGCLPHERAWLDHIYD+LGYVDTFREVR EAELYSWWSNRGQARAKNVGWRIDYHA
Sbjct 181 NQKSSGCLPHERAWLDHIYDDLGYVDTFREVRQEAELYSWWSNRGQARAKNVGWRIDYHA 240
Query 253 CSPDWKTRTVNAWVYRDEWYSDHAPVIIDYKI 284
CSPDWK RTVNAWVY+++W+SDHAPVIIDYKI
Sbjct 241 CSPDWKERTVNAWVYKEQWFSDHAPVIIDYKI 272
>N9BX91 Exodeoxyribonuclease III [Acinetobacter ursingii ANC 3649]
Length=273
Score = 549 bits (1414), Expect = 0.0
Identities = 257/272 (94%), Positives = 266/272 (98%), Gaps = 0/272 (0%)
Query 13 MIPKDSYPSDVKILRVVSINVNGLRSSVTKGLLEWLEKSEADVICMQESRITHAQWTDKF 72
MIPKD YPSDVKILRVVSINVNGLRSSVTKGLLEWLE+SEADV+CMQESRITHAQWTDKF
Sbjct 1 MIPKDRYPSDVKILRVVSINVNGLRSSVTKGLLEWLEQSEADVVCMQESRITHAQWTDKF 60
Query 73 KPEGWYTHLFPAERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGLNQPAY 132
KPEGWYTHLFPAERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGL+Q AY
Sbjct 61 KPEGWYTHLFPAERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGLDQSAY 120
Query 133 ICSLYLPSGSSGDEAQARKDVFLEKYAQILKQWRDENKSIIVCGDYNIVHKRIDIKNWSG 192
ICSLYLPSGSSGDEAQARKDVFLE+YA ILKQWR ENKSIIVCGDYNIVHKRIDIKNWSG
Sbjct 121 ICSLYLPSGSSGDEAQARKDVFLEQYAHILKQWRTENKSIIVCGDYNIVHKRIDIKNWSG 180
Query 193 NQKSSGCLPHERAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHA 252
NQKSSGCLPHERAWLDHIYD+LGYVDTFREVR EAELYSWWSNRGQARAKNVGWRIDYHA
Sbjct 181 NQKSSGCLPHERAWLDHIYDDLGYVDTFREVRQEAELYSWWSNRGQARAKNVGWRIDYHA 240
Query 253 CSPDWKTRTVNAWVYRDEWYSDHAPVIIDYKI 284
CSPDWK RTVNAWVY+++W+SDHAPVIIDYKI
Sbjct 241 CSPDWKERTVNAWVYKEQWFSDHAPVIIDYKI 272
>A0A3G9FTH9 Exodeoxyribonuclease III [Acinetobacter ursingii]
Length=273
Score = 549 bits (1414), Expect = 0.0
Identities = 257/272 (94%), Positives = 266/272 (98%), Gaps = 0/272 (0%)
Query 13 MIPKDSYPSDVKILRVVSINVNGLRSSVTKGLLEWLEKSEADVICMQESRITHAQWTDKF 72
MIPKD YPSDVKILRVVSINVNGLRSSVTKGLLEWLE+SEADV+CMQESRITHAQWTDKF
Sbjct 1 MIPKDRYPSDVKILRVVSINVNGLRSSVTKGLLEWLEQSEADVVCMQESRITHAQWTDKF 60
Query 73 KPEGWYTHLFPAERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGLNQPAY 132
KPEGWYTHLFPAERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGL+Q AY
Sbjct 61 KPEGWYTHLFPAERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGLDQSAY 120
Query 133 ICSLYLPSGSSGDEAQARKDVFLEKYAQILKQWRDENKSIIVCGDYNIVHKRIDIKNWSG 192
ICSLYLPSGSSGDEAQARKDVFLE+YA ILKQWR ENKSIIVCGDYNIVHKRIDIKNWSG
Sbjct 121 ICSLYLPSGSSGDEAQARKDVFLEQYAHILKQWRTENKSIIVCGDYNIVHKRIDIKNWSG 180
Query 193 NQKSSGCLPHERAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHA 252
NQKSSGCLPHERAWLDHIYD+LGYVDTFREVR EAELYSWWSNRGQARAKNVGWRIDYHA
Sbjct 181 NQKSSGCLPHERAWLDHIYDDLGYVDTFREVRQEAELYSWWSNRGQARAKNVGWRIDYHA 240
Query 253 CSPDWKTRTVNAWVYRDEWYSDHAPVIIDYKI 284
CSPDWK RTVNAWVY+++W+SDHAPVIIDYKI
Sbjct 241 CSPDWKERTVNAWVYKEQWFSDHAPVIIDYKI 272
>A0A3D2SNZ4 Exodeoxyribonuclease III [Acinetobacter ursingii]
Length=273
Score = 548 bits (1413), Expect = 0.0
Identities = 256/272 (94%), Positives = 266/272 (98%), Gaps = 0/272 (0%)
Query 13 MIPKDSYPSDVKILRVVSINVNGLRSSVTKGLLEWLEKSEADVICMQESRITHAQWTDKF 72
MIPKD YPSDVKILRVVSINVNGLRSSVTKGLLEWLE+SEADV+CMQESRITHAQWTDKF
Sbjct 1 MIPKDRYPSDVKILRVVSINVNGLRSSVTKGLLEWLEQSEADVVCMQESRITHAQWTDKF 60
Query 73 KPEGWYTHLFPAERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGLNQPAY 132
KPEGWYTHLFPAERAGYAGTAIYSR+PFKSVQDGLGFELADSQGRFIAAEFDLGL+Q AY
Sbjct 61 KPEGWYTHLFPAERAGYAGTAIYSRVPFKSVQDGLGFELADSQGRFIAAEFDLGLDQSAY 120
Query 133 ICSLYLPSGSSGDEAQARKDVFLEKYAQILKQWRDENKSIIVCGDYNIVHKRIDIKNWSG 192
ICSLYLPSGSSGDEAQARKDVFLE+YA ILKQWR ENKSIIVCGDYNIVHKRIDIKNWSG
Sbjct 121 ICSLYLPSGSSGDEAQARKDVFLEQYAHILKQWRTENKSIIVCGDYNIVHKRIDIKNWSG 180
Query 193 NQKSSGCLPHERAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHA 252
NQKSSGCLPHERAWLDHIYD+LGYVDTFREVR EAELYSWWSNRGQARAKNVGWRIDYHA
Sbjct 181 NQKSSGCLPHERAWLDHIYDDLGYVDTFREVRQEAELYSWWSNRGQARAKNVGWRIDYHA 240
Query 253 CSPDWKTRTVNAWVYRDEWYSDHAPVIIDYKI 284
CSPDWK RTVNAWVY+++W+SDHAPVIIDYKI
Sbjct 241 CSPDWKERTVNAWVYKEQWFSDHAPVIIDYKI 272
>A0A7T9Z875 Exodeoxyribonuclease III [Acinetobacter ursingii]
Length=273
Score = 546 bits (1407), Expect = 0.0
Identities = 254/272 (93%), Positives = 266/272 (98%), Gaps = 0/272 (0%)
Query 13 MIPKDSYPSDVKILRVVSINVNGLRSSVTKGLLEWLEKSEADVICMQESRITHAQWTDKF 72
MIPKD YPSDVKILRVVSINVNGLRSSVTKGLLEWLE+SEADV+CMQESRITHAQWTDKF
Sbjct 1 MIPKDRYPSDVKILRVVSINVNGLRSSVTKGLLEWLEQSEADVVCMQESRITHAQWTDKF 60
Query 73 KPEGWYTHLFPAERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGLNQPAY 132
KPEGWYTHLFPAERAGYAGTAIYSR+PFKSV+DGLGFELADSQGRFIAAEFDLGL+Q AY
Sbjct 61 KPEGWYTHLFPAERAGYAGTAIYSRVPFKSVEDGLGFELADSQGRFIAAEFDLGLDQSAY 120
Query 133 ICSLYLPSGSSGDEAQARKDVFLEKYAQILKQWRDENKSIIVCGDYNIVHKRIDIKNWSG 192
ICSLYLPSGSSGDEAQARKDVFLE+YA ILKQWR +NKSIIVCGDYNIVHKRIDIKNWSG
Sbjct 121 ICSLYLPSGSSGDEAQARKDVFLEQYAHILKQWRTDNKSIIVCGDYNIVHKRIDIKNWSG 180
Query 193 NQKSSGCLPHERAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHA 252
NQKSSGCLPHERAWLDHIYD+LGYVDTFREVR EAELYSWWSNRGQARAKNVGWRIDYHA
Sbjct 181 NQKSSGCLPHERAWLDHIYDDLGYVDTFREVRQEAELYSWWSNRGQARAKNVGWRIDYHA 240
Query 253 CSPDWKTRTVNAWVYRDEWYSDHAPVIIDYKI 284
CSPDWK RTVNAWVY+++W+SDHAPVIIDYKI
Sbjct 241 CSPDWKERTVNAWVYKEQWFSDHAPVIIDYKI 272
>Q7DD47 Exodeoxyribonuclease [Neisseria meningitidis serogroup
B (strain MC58)]
Length=259
Score = 246 bits (629), Expect = 5e-85
Identities = 116/259 (45%), Positives = 172/259 (66%), Gaps = 6/259 (2%)
Query 25 ILRVVSINVNGLRSSVTKGLLEWLEKSEADVICMQESRITHAQWTDKFK-PEGWYTHLFP 83
+L+++S NVNG+RS+ KG E++ S AD++C+QE + A + K P G + H
Sbjct 1 MLKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHC 60
Query 84 AERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGLNQPAYICSLYLPSGSS 143
AE+ GY+G A+YS+ +VQ G+G E D +GRF+ +F + SLYLPSGSS
Sbjct 61 AEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFGR-----LSVISLYLPSGSS 115
Query 144 GDEAQARKDVFLEKYAQILKQWRDENKSIIVCGDYNIVHKRIDIKNWSGNQKSSGCLPHE 203
+E Q K FL+ + +L+ ++E + I+VCGD+NI H+ ID+KNW GNQK+SG LP E
Sbjct 116 AEERQQVKYRFLDAFYPMLEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEE 175
Query 204 RAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHACSPDWKTRTVN 263
R W+ + +LG+ D +R + P+ Y+WWSNRGQA AK+VGWRIDY +P+ + V+
Sbjct 176 REWIGKVIHKLGWTDMWRTLYPDVPGYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVS 235
Query 264 AWVYRDEWYSDHAPVIIDY 282
A VY+DE +SDHAP++++Y
Sbjct 236 AHVYKDEKFSDHAPLVVEY 254
>B2BSQ7 Exodeoxyribonuclease III [Legionella pneumophila]
Length=260
Score = 239 bits (611), Expect = 3e-82
Identities = 111/260 (43%), Positives = 166/260 (64%), Gaps = 7/260 (3%)
Query 26 LRVVSINVNGLRSSVTKGLLEWLEKSEADVICMQESRITHAQWTDK--FKPEGWYTHLFP 83
++V+S N NG+RSS G +WL + D +C+QE++ Q + + P ++ F
Sbjct 1 MKVISFNANGIRSSARNGFYDWLVGQDVDFVCIQETKSQVEQLIPEELYFPRDYFCDYFD 60
Query 84 AERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGLNQPAYICSLYLPSGSS 143
AE+ GY+G AIYS+ + GLGF+ D +GR+I ++ + SLYLPSG+S
Sbjct 61 AEKKGYSGVAIYSKYKPVRIVKGLGFDYCDKEGRYIQFDYP-----KLSVISLYLPSGTS 115
Query 144 GDEAQARKDVFLEKYAQILKQWRDENKSIIVCGDYNIVHKRIDIKNWSGNQKSSGCLPHE 203
G++ Q K FLE++A+ L ++E + +I+CGDYNI HK+ID+KNW GNQK+SG LP E
Sbjct 116 GEDRQEVKYAFLEQFARHLMNLKNEGRELIICGDYNIAHKKIDLKNWRGNQKNSGFLPEE 175
Query 204 RAWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHACSPDWKTRTVN 263
RAW+D ++ +G+VD FR E E Y+WWS R +A KNVGWRIDY +P +
Sbjct 176 RAWMDELFGSMGFVDAFRVHNQEEEQYTWWSYRARAWEKNVGWRIDYQVITPGLTEYVAD 235
Query 264 AWVYRDEWYSDHAPVIIDYK 283
+ ++R+ +SDHAP++I+YK
Sbjct 236 SRIFREARFSDHAPLMIEYK 255
>A0A8B6X760 Exodeoxyribonuclease III [Derxia gummosa DSM 723]
Length=273
Score = 237 bits (605), Expect = 3e-81
Identities = 122/270 (45%), Positives = 167/270 (62%), Gaps = 15/270 (6%)
Query 26 LRVVSINVNGLRSSVTKGLLEWLEKSEADVICMQESRITHAQW-TDKFKPEGW-----YT 79
LR+++ N+NG+RS+ TKG +WL A +C+QE + A + P G +
Sbjct 5 LRIITANLNGIRSAATKGFFDWLALQHAHGVCVQELKAQAADMKSGMIAPPGTPLAGEFA 64
Query 80 HLFPAERAGYAGTAIY---SRIPFKSVQDGLGFELADSQGRFIAAEFDLGLNQPAYICSL 136
H A + GY+G +Y IP V+ G G D +GR I A F+L + A I SL
Sbjct 65 H---AVKKGYSGVGVYLDRGCIPAVEVEHGFGVSEFDDEGRMIEARFELAGMKLALI-SL 120
Query 137 YLPSGSSGDEAQARKDVFLEKYAQILKQWRDENKSIIVCGDYNIVHKRIDIKNWSGNQKS 196
YLPSGSSGD QA K FL+ + L++ R + I++CGD+NI H+ D+KNW NQK+
Sbjct 121 YLPSGSSGDHRQASKFRFLDAFIPHLQKLRACGREILLCGDWNIAHRETDLKNWRSNQKN 180
Query 197 SGCLPHERAWLDHIYDELGYVDTFREVRPEA--ELYSWWSNRGQARAKNVGWRIDYHACS 254
SG LP ERAWL +++ELGYVD +R + P+A E Y+WWSNRGQARA NVGWRIDY +
Sbjct 181 SGFLPEERAWLTRVFEELGYVDVYRRLHPDATDECYTWWSNRGQARANNVGWRIDYQIAT 240
Query 255 PDWKTRTVNAWVYRDEWYSDHAPVIIDYKI 284
P V A +Y++ W+SDHAP+ IDY++
Sbjct 241 PALAACAVRAGIYKESWFSDHAPLTIDYEL 270
>Q51380 Catabolite repression control protein [Pseudomonas aeruginosa]
Length=259
Score = 212 bits (540), Expect = 1e-71
Identities = 103/258 (40%), Positives = 155/258 (60%), Gaps = 6/258 (2%)
Query 26 LRVVSINVNGLRSSVTKGLLEWLEKSEADVICMQESRITHAQWTD-KFKPEGWYTHLFPA 84
+R++S+NVNG++++ +GLL WL+ ADVIC+Q++R + D F+ +G++ + A
Sbjct 1 MRIISVNVNGIQAAAERGLLSWLQAQNADVICLQDTRASAFDLDDPSFQLDGYFLYACDA 60
Query 85 ERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGLNQPAYICSLYLPSGSSG 144
E G A+YSR+ K+V GLGFE AD GR++ A+FD I +L LPSG SG
Sbjct 61 ELPEQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFD-----KVSIATLLLPSGQSG 115
Query 145 DEAQARKDVFLEKYAQILKQWRDENKSIIVCGDYNIVHKRIDIKNWSGNQKSSGCLPHER 204
DE+ +K F++ + L + R + + I CG + H+++D+KNW Q+ G L ER
Sbjct 116 DESLNQKFKFMDDFTHYLSKQRRKRREYIYCGSLYVAHQKMDVKNWRECQQMPGFLAPER 175
Query 205 AWLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHACSPDWKTRTVNA 264
AWLD ++ LGY D REV E + +SWW + QA N+GWR DY +P + NA
Sbjct 176 AWLDEVFGNLGYADALREVSREGDQFSWWPDSEQAEMLNLGWRFDYQVLTPGLRRFVRNA 235
Query 265 WVYRDEWYSDHAPVIIDY 282
+ R +S HAP+I+DY
Sbjct 236 KLPRQPRFSQHAPLIVDY 253
>Q09HU8 Exodeoxyribonuclease [Streptomyces coelicolor (strain
ATCC BAA-471 / A3(2) / M145)]
Length=267
Score = 205 bits (522), Expect = 9e-69
Identities = 112/270 (41%), Positives = 155/270 (57%), Gaps = 17/270 (6%)
Query 25 ILRVVSINVNGLRSSVTKGLLEWLEKSEADVICMQESRITHAQWTDKF-KPEGWYTHLFP 83
+L V S+NVNGL ++ KG +EWL + ADV+C+QE R Q D PEGW+ P
Sbjct 1 MLTVTSVNVNGLLAAAKKGFVEWLAGTSADVLCLQEVRAEPHQLPDHAGAPEGWHVTHAP 60
Query 84 AERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGLNQPAYICSLYLPSGSS 143
A G AG ++Y+R +V+ G G D+ GR++ A+ + SLYLPSG
Sbjct 61 AAAKGRAGVSLYTRREPDAVRVGFGSTEFDTSGRYVEADLP-----GVTVASLYLPSGEV 115
Query 144 GDEAQARKDVFLEKYAQILKQWRD----ENKSIIVCGDYNIVHKRIDIKNWSGNQKSSGC 199
G E Q K F+ ++ LK+ R+ + + ++VCGD+NI H+ D+KNW N+K+SG
Sbjct 116 GTERQDEKVRFMGEFLAYLKELRERAAAQGREVVVCGDWNIAHREADLKNWRANKKNSGF 175
Query 200 LPHERAWLDHIYD--ELGYVDTFREVRPEAE-LYSWWSNRGQARAKNVGWRIDYHACSPD 256
LP ER WL + D E GYVD R + P+ E YSWWS RG+A + GWRIDYH +P
Sbjct 176 LPEEREWLGRVLDPAEGGYVDVVRALHPDVEGPYSWWSYRGRAFGNDAGWRIDYHVSTPG 235
Query 257 WKTRTVNAWVYR----DEWYSDHAPVIIDY 282
+ V +V R E +SDHAPV + Y
Sbjct 236 LAAKAVKGYVERAATHAERWSDHAPVTVVY 265
>Q9RXF9 Exodeoxyribonuclease III [Deinococcus radiodurans (strain
ATCC 13939 / DSM 20539 / JCM 16871 / CCUG 27074 / LMG 4051
/ NBRC 15346 / NCIMB 9279 / VKM B-1422 / R1)]
Length=283
Score = 187 bits (475), Expect = 2e-61
Identities = 105/253 (42%), Positives = 148/253 (58%), Gaps = 13/253 (5%)
Query 26 LRVVSINVNGLRSSVTKGLLEWLEKSEADVICMQESRITHAQWTDKFKPEGWYTHLFPAE 85
L+V + NVNGLRS++ KGL +W+E ++ DV+ +QE R A+ P G+++ FPA+
Sbjct 35 LKVTTFNVNGLRSALRKGLADWVESNQPDVLLLQEVR---AEPMPDALP-GYHSAWFPAQ 90
Query 86 RAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGLNQPAYICSLYLPSGSSGD 145
+AGY+G AI SR+P K V+ G+ + D++GR ++A + S+YLPSGSSG+
Sbjct 91 KAGYSGVAILSRLPLKDVRLGMPHDEMDAEGRVVSA-----VVAGVRFVSVYLPSGSSGE 145
Query 146 EAQARKDVFLEKYAQILKQWRDENKSIIVCGDYNIVHKRIDIKNWSGNQKSSGCLPHERA 205
Q KD L Y + + + +++ GDYNI H+ ID+KNW NQK+SG LPHER
Sbjct 146 ARQGFKDRVLADYQAWVSELLAAGEPVVIGGDYNIAHREIDLKNWRSNQKNSGFLPHERT 205
Query 206 WLDHIYDELGYVDTFREVRPEAELYSWWSNRGQARAKNVGWRIDYHACSPDWKTRTVNAW 265
W+ + G VD R+ E Y+WWSNR A A NVGWRIDY + R
Sbjct 206 WMT-AHLAAGLVDCHRDCLGEEAEYTWWSNRANAYANNVGWRIDYLLSA---GVRVSGVR 261
Query 266 VYRDEWYSDHAPV 278
R SDHAP+
Sbjct 262 SDRSVRLSDHAPL 274
>D7NZI6 AmpN [Stenotrophomonas maltophilia]
Length=220
Score = 180 bits (457), Expect = 1e-59
Identities = 95/224 (42%), Positives = 128/224 (57%), Gaps = 16/224 (7%)
Query 72 FKPEGWYTHLFPA-ERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGLNQP 130
F+P+G + A + GY+G AIYS+ V LG+ D +GR+I A +
Sbjct 2 FRPDGHHCFYRDAITKKGYSGVAIYSKREPDQVITSLGWAPFDDEGRYIEARYG-----N 56
Query 131 AYICSLYLPSGSSGDEAQARKDVFLEKYAQILKQWRDENKSIIVCGDYNIVHKRIDIKNW 190
+ S Y+PSGSSGD Q K +E IL++W + ++CGD+NIV +DIKNW
Sbjct 57 LSVVSFYIPSGSSGDLRQGFKFEVMEWLRPILEEWARSGRDYVLCGDWNIVRSALDIKNW 116
Query 191 SGNQKSSGCLPHERAWL-----DH-----IYDELGYVDTFREVRPEAELYSWWSNRGQAR 240
NQK+SGCLP ER WL DH + G+ D +R + P E Y+WWSNRG AR
Sbjct 117 KSNQKNSGCLPEERDWLNALCADHGQATDVAAGRGWADAYRLLNPTGEDYTWWSNRGAAR 176
Query 241 AKNVGWRIDYHACSPDWKTRTVNAWVYRDEWYSDHAPVIIDYKI 284
A NVGWRIDY +P + R + +YRDE +SDHAP +DY +
Sbjct 177 ANNVGWRIDYQFITPGLRDRLRSCSIYRDERFSDHAPFTVDYDL 220
>C8CEB5 Catabolite repression control protein [Pseudomonas aeruginosa]
Length=180
Score = 152 bits (384), Expect = 3e-49
Identities = 73/177 (41%), Positives = 103/177 (58%), Gaps = 5/177 (3%)
Query 106 GLGFELADSQGRFIAAEFDLGLNQPAYICSLYLPSGSSGDEAQARKDVFLEKYAQILKQW 165
GLGFE AD GR++ A+FD I +L LPSG SGDE+ +K F++ + L +
Sbjct 3 GLGFETADRYGRYLQADFD-----KVSIATLLLPSGQSGDESLNQKFKFMDDFTHYLSKQ 57
Query 166 RDENKSIIVCGDYNIVHKRIDIKNWSGNQKSSGCLPHERAWLDHIYDELGYVDTFREVRP 225
R + + I CG + H+++D+KNW Q+ G L ERAWLD ++ LGY D REV
Sbjct 58 RRKRREYIYCGSLYVAHQKMDVKNWRECQQMPGFLAPERAWLDEVFGNLGYADALREVSR 117
Query 226 EAELYSWWSNRGQARAKNVGWRIDYHACSPDWKTRTVNAWVYRDEWYSDHAPVIIDY 282
E + +SWW + QA N+GWR DY +P + NA + R +S HAP+I+DY
Sbjct 118 EGDQFSWWPDSEQAEMLNLGWRFDYQVLTPGLRRFVRNAKLPRQPRFSQHAPLIVDY 174
>Q6IP62 DNA-(apurinic or apyrimidinic site) endonuclease [Xenopus
laevis]
Length=316
Score = 142 bits (357), Expect = 1e-43
Identities = 86/262 (33%), Positives = 136/262 (52%), Gaps = 17/262 (6%)
Query 26 LRVVSINVNGLRSSVTKGLLEWLEKSEADVICMQESRITHAQWTDKFKPEGWYTHLF--- 82
L++ S NV+G+R+ + K L W+ + + ++C+QE + K Y H +
Sbjct 61 LKISSWNVDGIRAWIKKQGLNWVREEDPHIMCLQEIKCAEKLLPPDVKDMPEYPHKYWAC 120
Query 83 PAERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGLNQPAYICSLYLPSGS 142
P E+ GY+G A+ + +V G+G E D +GR I AEFD ++ + Y+P+ S
Sbjct 121 PDEKEGYSGVAMLCKDKPLNVTYGIGIEEHDKEGRVITAEFD-----SFFVIAAYIPNSS 175
Query 143 SGD---EAQARKDVFLEKYAQILKQWRDENKSIIVCGDYNIVHKRIDIKNWSGNQKSSGC 199
G + + R DV Y + L D K +I+CGD N+ H+ ID+KN N+K+ G
Sbjct 176 RGLVRLDYRQRWDVDFRAYLKGL----DSKKPLILCGDLNVAHQEIDLKNPKTNKKTPGF 231
Query 200 LPHERAWLDHIYDELGYVDTFREVRPE-AELYSWWSNRGQARAKNVGWRIDYHACSPDWK 258
P ER + E GY+D+FRE+ P+ Y++W+ ARAKNVGWR+DY S +
Sbjct 232 TPQERQGFGELLAE-GYLDSFRELYPDKPSAYTFWTYMMNARAKNVGWRLDYFVLSKALR 290
Query 259 TRTVNAWVYRDEWYSDHAPVII 280
+ + SDH P+ +
Sbjct 291 PALCDCKIRSKVMGSDHCPITL 312
>A0A8M1P554 DNA-(apurinic or apyrimidinic site) endonuclease [Danio
rerio]
Length=309
Score = 139 bits (349), Expect = 2e-42
Identities = 90/276 (33%), Positives = 143/276 (52%), Gaps = 20/276 (7%)
Query 12 RMIPKDSYPSDVKILRVVSINVNGLRSSVTKGLLEWLEKSEADVICMQESRITHAQWTDK 71
++ KD +++KI S NV+GLR+ V K L+W+ K + D++C+QE++
Sbjct 43 KLTSKDGRAANMKI---TSWNVDGLRAWVKKNGLDWVRKEDPDILCLQETKCAEKALPAD 99
Query 72 FKPEGWYTHLFPA---ERAGYAGTAIYSRIPFKSVQDGLGFELADSQGRFIAAEFDLGLN 128
Y H + A ++ GY+G A+ + +V G+G E D +GR I AEF
Sbjct 100 ITGMPEYPHKYWAGSEDKEGYSGVAMLCKTEPLNVTYGIGKEEHDKEGRVITAEFP---- 155
Query 129 QPAYICSLYLPSGSSG-DEAQARK--DVFLEKYAQILKQWRDENKSIIVCGDYNIVHKRI 185
++ + Y+P+ S G RK DV Y L D K +++CGD N+ H+ I
Sbjct 156 -DFFLVTAYVPNASRGLVRLDYRKTWDVDFRAYLCGL----DARKPLVLCGDLNVAHQEI 210
Query 186 DIKNWSGNQKSSGCLPHERAWLDHIYDELGYVDTFREVRP-EAELYSWWSNRGQARAKNV 244
D+KN GN+K++G P ER + E G+ D+FRE+ P +A Y++W+ AR+KNV
Sbjct 211 DLKNPKGNRKNAGFTPEEREGFTQLL-EAGFTDSFRELYPDQAYAYTFWTYMMNARSKNV 269
Query 245 GWRIDYHACSPDWKTRTVNAWVYRDEWYSDHAPVII 280
GWR+DY S ++ + SDH P+ +
Sbjct 270 GWRLDYFVLSSALLPGLCDSKIRNTAMGSDHCPITL 305
Lambda K H a alpha
0.321 0.137 0.444 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1176480
Database: c4b5080d7915dbf77be08873271e6127.TrEMBL.fasta
Posted date: May 10, 2024 1:45 AM
Number of letters in database: 5,914
Number of sequences in database: 22
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
