BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: a7b1107d9abf7b12648adc15c0002a9f.SwissProt.fasta
13 sequences; 3,304 total letters
Query= ACIAD3484
Length=292
Score E
Sequences producing significant alignments: (Bits) Value
P54535 Arginine-binding extracellular protein ArtP [Bacillus subt... 97.4 2e-27
P30859 Putative ABC transporter arginine-binding protein 2 [Esche... 89.4 1e-24
P0AEN0 L-cystine-binding protein TcyJ [Escherichia coli O6:H1 (st... 87.4 1e-23
P0AEM9 L-cystine-binding protein TcyJ [Escherichia coli (strain K... 87.4 1e-23
G3XD47 L-arginine-binding protein [Pseudomonas aeruginosa (strain... 82.8 4e-22
P30860 ABC transporter arginine-binding protein 1 [Escherichia co... 80.1 3e-21
O84385 Probable ABC transporter arginine-binding protein ArtJ [Ch... 80.1 4e-21
Q06758 Probable histidine-binding protein [Neisseria gonorrhoeae] 73.2 1e-18
P54952 Probable amino-acid-binding protein YxeM [Bacillus subtili... 69.3 3e-17
P0AEQ4 Glutamine-binding periplasmic protein [Escherichia coli O6... 65.5 5e-16
P0AEQ5 Glutamine-binding periplasmic protein [Escherichia coli O1... 65.5 5e-16
P0AEQ3 Glutamine-binding periplasmic protein [Escherichia coli (s... 65.5 5e-16
P45091 ABC transporter arginine-binding protein [Haemophilus infl... 65.1 7e-16
>P54535 Arginine-binding extracellular protein ArtP [Bacillus
subtilis (strain 168)]
Length=255
Score = 97.4 bits (241), Expect = 2e-27
Identities = 75/265 (28%), Positives = 125/265 (47%), Gaps = 24/265 (9%)
Query 14 LIIGACVISSLVACSQSENHKDMTSKGDTSPQASGTTYHIGSDITFPPFEYMENDQPAGF 73
L++ AC+ +L AC S + + K +G+ + PFEY E D GF
Sbjct 7 LLVAACITFALTACGSSNSGSESGKK----------KLIMGTSADYKPFEYKEGDNIVGF 56
Query 74 DIDIAHKIFEKTGDQIKFVDTRFSNLITGLEAKKFDLVFSGLYITPERMKKVDMVPYYMT 133
D+++A + +K G +I+ D F++LIT L++K+ DLV SG+ TPER K+VD Y T
Sbjct 57 DVELAKALAKKAGYEIEVQDMDFNSLITALKSKQVDLVLSGMTPTPERKKQVDFSDVYYT 116
Query 134 REALLSLVGSTYQPKVRDELCGKTISSQKGSIFPQQLHQISDESCVAKGKPPITVREFET 193
++ + ++D L GKT+ Q GSI ++ ++S E +
Sbjct 117 ANHMIVSKKDSGIQSLKD-LKGKTVGVQLGSIQEEKGKELSPEY-------GFKTEDRNR 168
Query 194 SPQAVQALLAKAVDAHYDDLSVAK---STVDKLKGRVAISSTDTFFPVLGGIAVRKGDTP 250
VQ + + DA + VA+ + D L+G V D G + D+
Sbjct 169 ISDLVQEIKSDRFDAAIIEDIVAEGYFKSNDDLQGFVI---PDAKAEEAGSAIAFRKDSE 225
Query 251 MYNKLKQGLEEMKKSGEYAALIEKY 275
+ +K + L+EM+ +GE L +K+
Sbjct 226 LTDKFNKALKEMEDNGELEKLKKKW 250
>P30859 Putative ABC transporter arginine-binding protein 2 [Escherichia
coli (strain K12)]
Length=243
Score = 89.4 bits (220), Expect = 1e-24
Identities = 64/230 (28%), Positives = 108/230 (47%), Gaps = 15/230 (7%)
Query 50 TYHIGSDITFPPFEYME-NDQPAGFDIDIAHKIFEKTGDQIKFVDTRFSNLITGLEAKKF 108
T ++ ++PPFE ++ N+Q GFD+D+A + ++ F + F +LI L+ ++
Sbjct 22 TIRFATEASYPPFESIDANNQIVGFDVDLAQALCKEIDATCTFSNQAFDSLIPSLKFRRV 81
Query 109 DLVFSGLYITPERMKKVDMVPYYMTREALLSLVGSTYQPKVRDELCGKTISSQKGSIFPQ 168
+ V +G+ ITPER K+V Y AL VG + D+L GK + Q G+
Sbjct 82 EAVMAGMDITPEREKQVLFTTPYYDNSAL--FVGQQGKYTSVDQLKGKKVGVQNGT---- 135
Query 169 QLHQISDESCVAKGKPPITVREFETSPQAVQALLAKAVDAHYDDLSVAKSTVDKLKGRVA 228
+ + + P IT +++ A L +D + D +V + A
Sbjct 136 -----THQKFIMDKHPEITTVPYDSYQNAKLDLQNGRIDGVFGDTAVVTEWLKDNPKLAA 190
Query 229 ISSTDT---FFPVLGGIAVRKGDTPMYNKLKQGLEEMKKSGEYAALIEKY 275
+ T +F GIAVR+G+T + KL LE++KK G Y + K+
Sbjct 191 VGDKVTDKDYFGTGLGIAVRQGNTELQQKLNTALEKVKKDGTYETIYNKW 240
>P0AEN0 L-cystine-binding protein TcyJ [Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC)]
Length=266
Score = 87.4 bits (215), Expect = 1e-23
Identities = 60/228 (26%), Positives = 108/228 (47%), Gaps = 12/228 (5%)
Query 50 TYHIGSDITFPPFEYMEND-QPAGFDIDIAHKIFEKTGDQIKFVDTRFSNLITGLEAKKF 108
T +G + T+PPF + +D + GF+++ A ++ + G + T++ ++ L++K+
Sbjct 42 TLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQLAKHLGVEASLKPTKWDGMLASLDSKRI 101
Query 109 DLVFSGLYITPERMKKVDM-VPYYMTREALLSLVGSTYQPKVRDELCGKTISSQKGSIFP 167
D+V + + I+ ER KK D PY ++ L G+ K D+L GK + G+ +
Sbjct 102 DVVINQVTISDERKKKYDFSTPYTISGIQALVKKGNEGTIKTADDLKGKKVGVGLGTNYE 161
Query 168 QQLHQISDESCVAKGKPPITVREFETSPQAVQALLAKAVDAHYDDLSVAKSTVDKLKGRV 227
+ L Q + VR ++ P Q L +DA D A V K +
Sbjct 162 EWLRQ---------NVQGVDVRTYDDDPTKYQDLRVGRIDAILVDRLAALDLVKKTNDTL 212
Query 228 AISSTDTFFPVLGGIAVRKGDTPMYNKLKQGLEEMKKSGEYAALIEKY 275
A++ + F G+A+RKG+ + + + EM+K G AL EK+
Sbjct 213 AVTG-EAFSRQESGVALRKGNEDLLKAVNDAIAEMQKDGTLQALSEKW 259
>P0AEM9 L-cystine-binding protein TcyJ [Escherichia coli (strain
K12)]
Length=266
Score = 87.4 bits (215), Expect = 1e-23
Identities = 60/228 (26%), Positives = 108/228 (47%), Gaps = 12/228 (5%)
Query 50 TYHIGSDITFPPFEYMEND-QPAGFDIDIAHKIFEKTGDQIKFVDTRFSNLITGLEAKKF 108
T +G + T+PPF + +D + GF+++ A ++ + G + T++ ++ L++K+
Sbjct 42 TLLVGLEGTYPPFSFQGDDGKLTGFEVEFAQQLAKHLGVEASLKPTKWDGMLASLDSKRI 101
Query 109 DLVFSGLYITPERMKKVDM-VPYYMTREALLSLVGSTYQPKVRDELCGKTISSQKGSIFP 167
D+V + + I+ ER KK D PY ++ L G+ K D+L GK + G+ +
Sbjct 102 DVVINQVTISDERKKKYDFSTPYTISGIQALVKKGNEGTIKTADDLKGKKVGVGLGTNYE 161
Query 168 QQLHQISDESCVAKGKPPITVREFETSPQAVQALLAKAVDAHYDDLSVAKSTVDKLKGRV 227
+ L Q + VR ++ P Q L +DA D A V K +
Sbjct 162 EWLRQ---------NVQGVDVRTYDDDPTKYQDLRVGRIDAILVDRLAALDLVKKTNDTL 212
Query 228 AISSTDTFFPVLGGIAVRKGDTPMYNKLKQGLEEMKKSGEYAALIEKY 275
A++ + F G+A+RKG+ + + + EM+K G AL EK+
Sbjct 213 AVTG-EAFSRQESGVALRKGNEDLLKAVNDAIAEMQKDGTLQALSEKW 259
>G3XD47 L-arginine-binding protein [Pseudomonas aeruginosa (strain
ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228
/ 1C / PRS 101 / PAO1)]
Length=259
Score = 82.8 bits (203), Expect = 4e-22
Identities = 72/240 (30%), Positives = 109/240 (45%), Gaps = 20/240 (8%)
Query 46 ASGTTYHIGSDITFPPFEYMEND-QPAGFDIDIAHKIFEKTGDQIKFVDTRFSNLITGLE 104
A+ IG + +PPF D Q AGFD+DI + + E+ Q K+V+ F LI L+
Sbjct 21 AADKPVRIGIEAAYPPFSLKTPDGQLAGFDVDIGNALCEEMKVQCKWVEQEFDGLIPALK 80
Query 105 AKKFDLVFSGLYITPERMKKVDMV-PYYMTREALLSLVG-STYQPKVRDELCGKTISSQK 162
+K D + S + IT ER + VD YY T + G S PK +L GK +
Sbjct 81 VRKIDAILSSMTITDERKRSVDFTNKYYNTPARFVMKEGASLNDPKA--DLKGKKAGVLR 138
Query 163 GSIFPQQLHQISDESCVAKGKPP-ITVREFETSPQAVQALLAKAVDAHYDDL-----SVA 216
GS +D A+ P + V + + +A L+A +DA D
Sbjct 139 GS--------TADRYASAELTPAGVEVVRYNSQQEANMDLVAGRLDAVVADSVNLEDGFL 190
Query 217 KSTVDKLKGRVAISSTDT-FFPVLGGIAVRKGDTPMYNKLKQGLEEMKKSGEYAALIEKY 275
K+ K V TD +F GIAVRKGD+ + K ++ ++ +G+Y + +KY
Sbjct 191 KTDAGKGYAFVGPQLTDAKYFGEGVGIAVRKGDSELAGKFNAAIDALRANGKYKQIQDKY 250
>P30860 ABC transporter arginine-binding protein 1 [Escherichia
coli (strain K12)]
Length=243
Score = 80.1 bits (196), Expect = 3e-21
Identities = 61/229 (27%), Positives = 107/229 (47%), Gaps = 17/229 (7%)
Query 52 HIGSDITFPPFEYM-ENDQPAGFDIDIAHKIFEKTGDQIKFVDTRFSNLITGLEAKKFDL 110
+ G T+PPFE + N++ GFDID+A + ++ + F + F +LI L+ +K+D
Sbjct 24 NFGVSATYPPFESIGANNEIVGFDIDLAKALCKQMQAECTFTNHAFDSLIPSLKFRKYDA 83
Query 111 VFSGLYITPERMKKVDMVPYYMTREALLSLVGSTYQPKVRDELCGKTISSQKGSIFPQQL 170
V SG+ ITPER K+V Y A++ TY K +L GK I + G+
Sbjct 84 VISGMDITPERSKQVSFTTPYYENSAVVIAKKDTY--KTFADLKGKRIGMENGT------ 135
Query 171 HQISDESCVAKGKPPITVREFETSPQAVQALLAKAVDAHYDDLSVAKSTVDKLKGRVAIS 230
+ + + P + +++ A L +D + D +V + K ++ ++
Sbjct 136 ---THQKYIQDQHPEVKTVSYDSYQNAFIDLKNGRIDGVFGDTAVVNEWL-KTNPQLGVA 191
Query 231 S---TD-TFFPVLGGIAVRKGDTPMYNKLKQGLEEMKKSGEYAALIEKY 275
+ TD +F GIAVR + + KL L +K G Y + +++
Sbjct 192 TEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGTYQKISDQW 240
>O84385 Probable ABC transporter arginine-binding protein ArtJ
[Chlamydia trachomatis (strain D/UW-3/Cx)]
Length=257
Score = 80.1 bits (196), Expect = 4e-21
Identities = 61/233 (26%), Positives = 114/233 (49%), Gaps = 23/233 (10%)
Query 53 IGSDITFPPFEYMEN-DQPAGFDIDIAHKIFEKTGDQIKFVDTRFSNLITGLEAKKFDLV 111
+G++ T+PPFE+++ + GFDID+A +I K G + + F LI L+ + D V
Sbjct 38 VGTNATYPPFEFVDKRGEVVGFDIDLAREISNKLGKTLDVREFSFDALILNLKQHRIDAV 97
Query 112 FSGLYITPERMKKVDMVPYY--MTREALLSLVGSTYQPKVRDELCGKTISSQKGSIFPQQ 169
+G+ ITP R+K++ M+PYY + +L G P + ++++ Q G+
Sbjct 98 ITGMSITPSRLKEILMIPYYGEEIKHLVLVFKGENKHPLPLTQY--RSVAVQTGTYQEAY 155
Query 170 LHQISDESCVAKGKPPITVREFETSPQAVQALLAKAVDAHYDDLSVAKSTVDKLKGRVAI 229
L +S+ + +R F+++ + + ++ + S+A+ LK A+
Sbjct 156 LQSLSE----------VHIRSFDSTLEVLMEVMHGKSPVAVLEPSIAQVV---LKDFPAL 202
Query 230 SSTDTFFP----VLG-GIAVRKGDTPMYNKLKQGLEEMKKSGEYAALIEKYNL 277
S+ P VLG GI V + K++ ++E++K G A L +K+ L
Sbjct 203 STATIDLPEDQWVLGYGIGVASDRPALALKIEAAVQEIRKEGVLAELEQKWGL 255
>Q06758 Probable histidine-binding protein [Neisseria gonorrhoeae]
Length=268
Score = 73.2 bits (178), Expect = 1e-18
Identities = 73/270 (27%), Positives = 115/270 (43%), Gaps = 35/270 (13%)
Query 18 ACVISSLVACSQSENHKDMTSKGDTSPQAS-GTTYHIGSDITFPPFEYMEND-QPAGFDI 75
AC +L AC K +P A+ G Y + S+ F PFE +++ GFD+
Sbjct 12 ACSALALSACGGQ-------GKDAAAPAANPGKVYRVASNAEFAPFESLDSKGNVEGFDV 64
Query 76 DIAHKIFEKTGDQIKFVDTRFSNLITGLEAKKFDLVFSGLYITPERMKKVDMV-PYYMTR 134
D+ + + + +I+F + +L L D+V SG+ IT +R + +D PY+
Sbjct 65 DLMNAMAKAGNFKIEFKHQPWDSLFPALNNGDADIVMSGVTITDDRKQSMDFSDPYFEIT 124
Query 135 EALLSLVGSTYQPKVRDELCGKTISSQ-------KGSIFPQQLHQISDESCVAKGKPPIT 187
+ +L PK GK +SS K + S + P I
Sbjct 125 QVVLV-------PK------GKKVSSSDDLKKMNKVGVVTGHTGDFSVSKLLGNDNPKIA 171
Query 188 VREFETSPQAVQALLAKAVDAHYDDLSVAKSTV--DKLKGRVAISSTDTFFPVLGGIAVR 245
FE P ++ L +D+ D +V + V + KG ++ D F GIAVR
Sbjct 172 --RFENVPLIIKELENGGLDSVVSDSAVIANYVKNNPAKGMDFVTLPD-FTTEHYGIAVR 228
Query 246 KGDTPMYNKLKQGLEEMKKSGEYAALIEKY 275
KGD L LE++++SGEY + KY
Sbjct 229 KGDEATVKMLNDALEKVRESGEYDKIYAKY 258
>P54952 Probable amino-acid-binding protein YxeM [Bacillus subtilis
(strain 168)]
Length=264
Score = 69.3 bits (168), Expect = 3e-17
Identities = 56/269 (21%), Positives = 115/269 (43%), Gaps = 18/269 (7%)
Query 14 LIIGACVISSLVACSQSENHKDMTSKGDTSPQASGTTYHIGSDITFPPFEYMENDQPAGF 73
+++ A +++ L AC G++S + H+G+ PF Y EN + GF
Sbjct 8 VLVVAALLAVLSACGN----------GNSSSKEDDNVLHVGATGQSYPFAYKENGKLTGF 57
Query 74 DIDIAHKIFEKTGDQIKFVDTRFSNLITGLEAKKFDLVFSGLYITPERMKKVDMVPYYMT 133
D+++ + +K ++ + FS L+ L+ K D + + + +T ER + + Y
Sbjct 58 DVEVMEAVAKKIDMKLDWKLLEFSGLMGELQTGKLDTISNQVAVTDERKETYNFTKPYAY 117
Query 134 REALLSLVGSTYQPKVRDELCGKTISSQKGSIFPQQLHQISDESCVAKGKPPITVREFET 193
+ + K D+L GKT+++ GS + L + I ++ +ET
Sbjct 118 AGTQIVVKKDNTDIKSVDDLKGKTVAAVLGSNHAKNLESKDPDK-------KINIKTYET 170
Query 194 SPQAVQALLAKAVDAHYDDLSVAKSTVDKLKGRVAISSTDTFF-PVLGGIAVRKGDTPMY 252
++ + VDA+ + +V + + K + ++ + V A +
Sbjct 171 QEGTLKDVAYGRVDAYVNSRTVLIAQIKKTGLPLKLAGDPIVYEQVAFPFAKDDAHDKLR 230
Query 253 NKLKQGLEEMKKSGEYAALIEKYNLQPLT 281
K+ + L+E++K G L EKY + +T
Sbjct 231 KKVNKALDELRKDGTLKKLSEKYFNEDIT 259
>P0AEQ4 Glutamine-binding periplasmic protein [Escherichia coli
O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=248
Score = 65.5 bits (158), Expect = 5e-16
Identities = 54/233 (23%), Positives = 95/233 (41%), Gaps = 9/233 (4%)
Query 43 SPQASGTTYHIGSDITFPPFEYMENDQPAGFDIDIAHKIFEKTGDQIKFVDTRFSNLITG 102
S A+ + +D F PFE+ + D+ GFD+D+ I ++ + FS +I
Sbjct 19 SSHAADKKLVVATDTAFVPFEFKQGDKYVGFDVDLWAAIAKELKLDYELKPMDFSGIIPA 78
Query 103 LEAKKFDLVFSGLYITPERMKKVDMVPYYMTREALLSLVGSTYQPKVRDELCGKTISSQK 162
L+ K DL +G+ IT ER K +D Y L+ + + K +L GK ++ +
Sbjct 79 LQTKNVDLALAGITITDERKKAIDFSDGYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKS 138
Query 163 GSIFPQQLHQISDESCVAKGKPPITVREFETSPQAVQALLAKAVDAHYDDLSVAKSTVDK 222
G+ + K K +R+F A L DA D +
Sbjct 139 GT------GSVDYAKANIKTK---DLRQFPNIDNAYMELGTNRADAVLHDTPNILYFIKT 189
Query 223 LKGRVAISSTDTFFPVLGGIAVRKGDTPMYNKLKQGLEEMKKSGEYAALIEKY 275
+ D+ GIA KG + +K+ L+ ++++G Y + +K+
Sbjct 190 AGNGQFKAVGDSLEAQQYGIAFPKGSDELRDKVNGALKTLRENGTYNEIYKKW 242
>P0AEQ5 Glutamine-binding periplasmic protein [Escherichia coli
O157:H7]
Length=248
Score = 65.5 bits (158), Expect = 5e-16
Identities = 54/233 (23%), Positives = 95/233 (41%), Gaps = 9/233 (4%)
Query 43 SPQASGTTYHIGSDITFPPFEYMENDQPAGFDIDIAHKIFEKTGDQIKFVDTRFSNLITG 102
S A+ + +D F PFE+ + D+ GFD+D+ I ++ + FS +I
Sbjct 19 SSHAADKKLVVATDTAFVPFEFKQGDKYVGFDVDLWAAIAKELKLDYELKPMDFSGIIPA 78
Query 103 LEAKKFDLVFSGLYITPERMKKVDMVPYYMTREALLSLVGSTYQPKVRDELCGKTISSQK 162
L+ K DL +G+ IT ER K +D Y L+ + + K +L GK ++ +
Sbjct 79 LQTKNVDLALAGITITDERKKAIDFSDGYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKS 138
Query 163 GSIFPQQLHQISDESCVAKGKPPITVREFETSPQAVQALLAKAVDAHYDDLSVAKSTVDK 222
G+ + K K +R+F A L DA D +
Sbjct 139 GT------GSVDYAKANIKTK---DLRQFPNIDNAYMELGTNRADAVLHDTPNILYFIKT 189
Query 223 LKGRVAISSTDTFFPVLGGIAVRKGDTPMYNKLKQGLEEMKKSGEYAALIEKY 275
+ D+ GIA KG + +K+ L+ ++++G Y + +K+
Sbjct 190 AGNGQFKAVGDSLEAQQYGIAFPKGSDELRDKVNGALKTLRENGTYNEIYKKW 242
>P0AEQ3 Glutamine-binding periplasmic protein [Escherichia coli
(strain K12)]
Length=248
Score = 65.5 bits (158), Expect = 5e-16
Identities = 54/233 (23%), Positives = 95/233 (41%), Gaps = 9/233 (4%)
Query 43 SPQASGTTYHIGSDITFPPFEYMENDQPAGFDIDIAHKIFEKTGDQIKFVDTRFSNLITG 102
S A+ + +D F PFE+ + D+ GFD+D+ I ++ + FS +I
Sbjct 19 SSHAADKKLVVATDTAFVPFEFKQGDKYVGFDVDLWAAIAKELKLDYELKPMDFSGIIPA 78
Query 103 LEAKKFDLVFSGLYITPERMKKVDMVPYYMTREALLSLVGSTYQPKVRDELCGKTISSQK 162
L+ K DL +G+ IT ER K +D Y L+ + + K +L GK ++ +
Sbjct 79 LQTKNVDLALAGITITDERKKAIDFSDGYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKS 138
Query 163 GSIFPQQLHQISDESCVAKGKPPITVREFETSPQAVQALLAKAVDAHYDDLSVAKSTVDK 222
G+ + K K +R+F A L DA D +
Sbjct 139 GT------GSVDYAKANIKTK---DLRQFPNIDNAYMELGTNRADAVLHDTPNILYFIKT 189
Query 223 LKGRVAISSTDTFFPVLGGIAVRKGDTPMYNKLKQGLEEMKKSGEYAALIEKY 275
+ D+ GIA KG + +K+ L+ ++++G Y + +K+
Sbjct 190 AGNGQFKAVGDSLEAQQYGIAFPKGSDELRDKVNGALKTLRENGTYNEIYKKW 242
>P45091 ABC transporter arginine-binding protein [Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=239
Score = 65.1 bits (157), Expect = 7e-16
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 20/223 (9%)
Query 58 TFPPFEYME-NDQPAGFDIDIAHKIFEKTGDQIKFVDTRFSNLITGLEAKKFDLVFSGLY 116
++PPFE + GFD+D+ + I ++ KF F LI L+AK+FD S +
Sbjct 29 SYPPFETTNAKGEIIGFDVDVTNAICQEIQATCKFKSETFDALIPNLKAKRFDAAISAID 88
Query 117 ITPERMKKVDMV-PYYMTREALLSLVGSTYQPKVRDELCGKTISSQKGSIFPQQLHQISD 175
IT R K+V YY + + ++L G K I Q G+ F Q
Sbjct 89 ITDARAKQVLFSDAYYDSSASYVALKGKATLES------AKNIGVQNGTTFQQY------ 136
Query 176 ESCVAKGKPPITVREFETSPQAVQALLAKAVDAHYDDLSVAKSTVDKLKGRVAISSTDTF 235
VA+ K + + + + A+ L + +D + D +V + K I T
Sbjct 137 --TVAETK-QYSPKSYASLQNAILDLKSGRIDIIFGDTAVLADMISKEPEIQFIGEKVTN 193
Query 236 FPVLG---GIAVRKGDTPMYNKLKQGLEEMKKSGEYAALIEKY 275
G GIA+ K + + +L +GL +K +GEY + +K+
Sbjct 194 KKYFGNGLGIAMHKSNKDLAAQLNKGLAAIKANGEYQKIYDKW 236
Lambda K H a alpha
0.318 0.134 0.383 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 689500
Database: a7b1107d9abf7b12648adc15c0002a9f.SwissProt.fasta
Posted date: Jun 2, 2024 2:28 PM
Number of letters in database: 3,304
Number of sequences in database: 13
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
