BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 3dba79b90f561e5cb6c20691a6c33351.TrEMBL.fasta
19 sequences; 5,717 total letters
Query= ACIAD3484
Length=292
Score E
Sequences producing significant alignments: (Bits) Value
Q6F732 Putative arginine/ornithine binding protein (ABC superfami... 578 0.0
A0A7G2SA03 Amino acid ABC transporter substrate-binding protein [... 571 0.0
A0A151Y080 Amino acid ABC transporter substrate-binding protein [... 392 6e-142
A0A241WB46 Amino acid ABC transporter substrate-binding protein [... 381 9e-138
A0A4Q7ASM3 ABC transporter substrate-binding protein [Acinetobact... 377 4e-136
A0A0A3X2Q0 Solute-binding protein family 3/N-terminal domain-cont... 377 7e-136
A0A4Q4GSR6 ABC transporter substrate-binding protein [Acinetobact... 376 1e-135
A0A1T1H1I3 Amino acid ABC transporter substrate-binding protein [... 376 1e-135
A0A178GKD9 Amino acid ABC transporter substrate-binding protein [... 373 2e-134
Q9WZ62 Amino acid ABC transporter, periplasmic amino acid-binding... 100 2e-28
Q72JG5 Amino acid ABC transporter, binding protein [Thermus therm... 98.6 1e-27
X2KTY2 ABC transporter substrate-binding protein [Streptomyces sp... 99.8 1e-27
Q9RGW8 Periplasmic binding protein [Streptomyces coelicolor (stra... 90.1 4e-24
Q8RCC4 ABC-type amino acid transport system, periplasmic componen... 85.9 6e-23
D2WXN1 Oligopeptide-binding protein 6 [Brachyspira pilosicoli] 84.3 3e-22
Q837S0 Amino acid ABC transporter, amino acid-binding/permease pr... 86.7 3e-22
O50181 ABC transporter substrate-binding protein [Pseudomonas aer... 82.8 8e-22
P71482 Amino acid ABC transporter substrate-binding protein [Limo... 81.3 3e-21
D0VWX8 ArtJ [Geobacillus stearothermophilus] 80.5 5e-21
>Q6F732 Putative arginine/ornithine binding protein (ABC superfamily,
peri_bind)(ArtI, aotJ) [Acinetobacter baylyi (strain
ATCC 33305 / BD413 / ADP1)]
Length=291
Score = 578 bits (1489), Expect = 0.0
Identities = 290/291 (99%), Positives = 291/291 (100%), Gaps = 0/291 (0%)
Query 1 LELSVRVNPTVKRLIIGACVISSLVACSQSENHKDMTSKGDTSPQASGTTYHIGSDITFP 60
+ELSVRVNPTVKRLIIGACVISSLVACSQSENHKDMTSKGDTSPQASGTTYHIGSDITFP
Sbjct 1 MELSVRVNPTVKRLIIGACVISSLVACSQSENHKDMTSKGDTSPQASGTTYHIGSDITFP 60
Query 61 PFEYMENDQPAGFDIDIAHKIFEKTGDQIKFVDTRFSNLITGLEAKKFDLVFSGLYITPE 120
PFEYMENDQPAGFDIDIAHKIFEKTGDQIKFVDTRFSNLITGLEAKKFDLVFSGLYITPE
Sbjct 61 PFEYMENDQPAGFDIDIAHKIFEKTGDQIKFVDTRFSNLITGLEAKKFDLVFSGLYITPE 120
Query 121 RMKKVDMVPYYMTREALLSLVGSTYQPKVRDELCGKTISSQKGSIFPQQLHQISDESCVA 180
RMKKVDMVPYYMTREALLSLVGSTYQPKVRDELCGKTISSQKGSIFPQQLHQISDESCVA
Sbjct 121 RMKKVDMVPYYMTREALLSLVGSTYQPKVRDELCGKTISSQKGSIFPQQLHQISDESCVA 180
Query 181 KGKPPITVREFETSPQAVQALLAKAVDAHYDDLSVAKSTVDKLKGRVAISSTDTFFPVLG 240
KGKPPITVREFETSPQAVQALLAKAVDAHYDDLSVAKSTVDKLKGRVAISSTDTFFPVLG
Sbjct 181 KGKPPITVREFETSPQAVQALLAKAVDAHYDDLSVAKSTVDKLKGRVAISSTDTFFPVLG 240
Query 241 GIAVRKGDTPMYNKLKQGLEEMKKSGEYAALIEKYNLQPLTDADIEKYMPK 291
GIAVRKGDTPMYNKLKQGLEEMKKSGEYAALIEKYNLQPLTDADIEKYMPK
Sbjct 241 GIAVRKGDTPMYNKLKQGLEEMKKSGEYAALIEKYNLQPLTDADIEKYMPK 291
>A0A7G2SA03 Amino acid ABC transporter substrate-binding protein
[Acinetobacter sp]
Length=287
Score = 571 bits (1471), Expect = 0.0
Identities = 286/287 (99%), Positives = 287/287 (100%), Gaps = 0/287 (0%)
Query 5 VRVNPTVKRLIIGACVISSLVACSQSENHKDMTSKGDTSPQASGTTYHIGSDITFPPFEY 64
+RVNPTVKRLIIGACVISSLVACSQSENHKDMTSKGDTSPQASGTTYHIGSDITFPPFEY
Sbjct 1 MRVNPTVKRLIIGACVISSLVACSQSENHKDMTSKGDTSPQASGTTYHIGSDITFPPFEY 60
Query 65 MENDQPAGFDIDIAHKIFEKTGDQIKFVDTRFSNLITGLEAKKFDLVFSGLYITPERMKK 124
MENDQPAGFDIDIAHKIFEKTGDQIKFVDTRFSNLITGLEAKKFDLVFSGLYITPERMKK
Sbjct 61 MENDQPAGFDIDIAHKIFEKTGDQIKFVDTRFSNLITGLEAKKFDLVFSGLYITPERMKK 120
Query 125 VDMVPYYMTREALLSLVGSTYQPKVRDELCGKTISSQKGSIFPQQLHQISDESCVAKGKP 184
VDMVPYYMTREALLSLVGSTYQPKVRDELCGKTISSQKGSIFPQQLHQISDESCVAKGKP
Sbjct 121 VDMVPYYMTREALLSLVGSTYQPKVRDELCGKTISSQKGSIFPQQLHQISDESCVAKGKP 180
Query 185 PITVREFETSPQAVQALLAKAVDAHYDDLSVAKSTVDKLKGRVAISSTDTFFPVLGGIAV 244
PITVREFETSPQAVQALLAKAVDAHYDDLSVAKSTVDKLKGRVAISSTDTFFPVLGGIAV
Sbjct 181 PITVREFETSPQAVQALLAKAVDAHYDDLSVAKSTVDKLKGRVAISSTDTFFPVLGGIAV 240
Query 245 RKGDTPMYNKLKQGLEEMKKSGEYAALIEKYNLQPLTDADIEKYMPK 291
RKGDTPMYNKLKQGLEEMKKSGEYAALIEKYNLQPLTDADIEKYMPK
Sbjct 241 RKGDTPMYNKLKQGLEEMKKSGEYAALIEKYNLQPLTDADIEKYMPK 287
>A0A151Y080 Amino acid ABC transporter substrate-binding protein
[Acinetobacter pragensis]
Length=286
Score = 392 bits (1007), Expect = 6e-142
Identities = 195/268 (73%), Positives = 226/268 (84%), Gaps = 1/268 (0%)
Query 24 LVACSQSENHKDMTSKGDTSPQASGTTYHIGSDITFPPFEYMENDQPAGFDIDIAHKIFE 83
L ACSQS K TS+ + S A+ TY IGSD+TFPPFEYMENDQPAGFD+D+A +IF
Sbjct 20 LAACSQSSEPKAETSQSNASDTAA-KTYQIGSDMTFPPFEYMENDQPAGFDVDLAAQIFA 78
Query 84 KTGDQIKFVDTRFSNLITGLEAKKFDLVFSGLYITPERMKKVDMVPYYMTREALLSLVGS 143
KT ++ FVDTRFSNLITGL+AKKFDLV SGLYIT ER++KVDMVPYYMT EA+++L GS
Sbjct 79 KTNEKANFVDTRFSNLITGLDAKKFDLVLSGLYITKERLEKVDMVPYYMTTEAVIALAGS 138
Query 144 TYQPKVRDELCGKTISSQKGSIFPQQLHQISDESCVAKGKPPITVREFETSPQAVQALLA 203
YQPKVRD+LCGKT++SQKGS+FP+QL ++S+ESCVAKGK PI VREFETSP++VQALLA
Sbjct 139 DYQPKVRDDLCGKTVASQKGSLFPEQLRKMSEESCVAKGKAPIKVREFETSPESVQALLA 198
Query 204 KAVDAHYDDLSVAKSTVDKLKGRVAISSTDTFFPVLGGIAVRKGDTPMYNKLKQGLEEMK 263
KAVDA YDD SVAKSTVDKLKGRV ISST+ FFP+LGGIAVRKGDT M K++ GL+ +K
Sbjct 199 KAVDAQYDDASVAKSTVDKLKGRVLISSTEPFFPILGGIAVRKGDTAMLQKVQSGLDALK 258
Query 264 KSGEYAALIEKYNLQPLTDADIEKYMPK 291
SGEY ALI KYNLQ TD DI KYMPK
Sbjct 259 ASGEYGALIAKYNLQEPTDEDIAKYMPK 286
>A0A241WB46 Amino acid ABC transporter substrate-binding protein
[Acinetobacter sp. ANC 3813]
Length=280
Score = 381 bits (979), Expect = 9e-138
Identities = 188/271 (69%), Positives = 225/271 (83%), Gaps = 1/271 (0%)
Query 21 ISSLVACSQSENHKDMTSKGDTSPQASGTTYHIGSDITFPPFEYMENDQPAGFDIDIAHK 80
+ L ACSQS K T++ + S AS Y IGSD+TFPPFEY+END+PAGFDIDIA++
Sbjct 11 VLGLTACSQSSEPKTETAQSNAS-DASAKVYQIGSDMTFPPFEYIENDKPAGFDIDIANQ 69
Query 81 IFEKTGDQIKFVDTRFSNLITGLEAKKFDLVFSGLYITPERMKKVDMVPYYMTREALLSL 140
IF +G ++ FVD+RFSNLITGLEAKKFDLV S LYIT ER+ KVDMVPYYMT EAL++L
Sbjct 70 IFAHSGAKVNFVDSRFSNLITGLEAKKFDLVMSALYITKERLDKVDMVPYYMTTEALIAL 129
Query 141 VGSTYQPKVRDELCGKTISSQKGSIFPQQLHQISDESCVAKGKPPITVREFETSPQAVQA 200
S Y+PK RD+LCGKTI+SQKGS+FP+QLH++S++SCVAKGK PITVREF+TSP++VQA
Sbjct 130 TDSDYKPKTRDDLCGKTIASQKGSMFPKQLHEMSEQSCVAKGKAPITVREFDTSPESVQA 189
Query 201 LLAKAVDAHYDDLSVAKSTVDKLKGRVAISSTDTFFPVLGGIAVRKGDTPMYNKLKQGLE 260
LLAKAVDAHYDD SVAKSTV+KLKGR+ I+ST+ FFPVLGGIA+ KGD M NK+ GL+
Sbjct 190 LLAKAVDAHYDDASVAKSTVEKLKGRIVITSTEPFFPVLGGIAIPKGDKEMLNKVTAGLD 249
Query 261 EMKKSGEYAALIEKYNLQPLTDADIEKYMPK 291
MKKSGEY LI KYNLQ TD +I+KYMPK
Sbjct 250 AMKKSGEYDKLIAKYNLQAPTDEEIQKYMPK 280
>A0A4Q7ASM3 ABC transporter substrate-binding protein [Acinetobacter
bouvetii]
Length=278
Score = 377 bits (968), Expect = 4e-136
Identities = 188/268 (70%), Positives = 221/268 (82%), Gaps = 3/268 (1%)
Query 24 LVACSQSENHKDMTSKGDTSPQASGTTYHIGSDITFPPFEYMENDQPAGFDIDIAHKIFE 83
L ACSQS K T++ ++ A Y+IGSDITFPPFEYMEND+PAGFDIDIA++IF
Sbjct 14 LTACSQSSEPKTETAQSNS---ADAKVYNIGSDITFPPFEYMENDKPAGFDIDIANQIFA 70
Query 84 KTGDQIKFVDTRFSNLITGLEAKKFDLVFSGLYITPERMKKVDMVPYYMTREALLSLVGS 143
+G + FVD+RFSNLITGLEAKKFDLV S LYIT ER+ KVDMVPYYMT EAL++L GS
Sbjct 71 HSGAKANFVDSRFSNLITGLEAKKFDLVMSALYITKERLDKVDMVPYYMTTEALIALTGS 130
Query 144 TYQPKVRDELCGKTISSQKGSIFPQQLHQISDESCVAKGKPPITVREFETSPQAVQALLA 203
QPK RD+LCGKTI+SQKGS+FP+QLH++S++SCVAKGK PITVREF+TSP++VQALLA
Sbjct 131 DCQPKTRDDLCGKTIASQKGSMFPKQLHEMSEQSCVAKGKAPITVREFDTSPESVQALLA 190
Query 204 KAVDAHYDDLSVAKSTVDKLKGRVAISSTDTFFPVLGGIAVRKGDTPMYNKLKQGLEEMK 263
KAVD HYDD SVAKSTV+KLKGR+ ISST+ FFPVLGGIA+ KGD M K+ GL+ MK
Sbjct 191 KAVDVHYDDASVAKSTVEKLKGRIVISSTEPFFPVLGGIAIPKGDKAMLEKVTAGLDAMK 250
Query 264 KSGEYAALIEKYNLQPLTDADIEKYMPK 291
KSGEY LI KYNLQ TD +I+KYMPK
Sbjct 251 KSGEYDKLIAKYNLQAPTDEEIQKYMPK 278
>A0A0A3X2Q0 Solute-binding protein family 3/N-terminal domain-containing
protein [Acinetobacter sp. HR7]
Length=282
Score = 377 bits (967), Expect = 7e-136
Identities = 186/281 (66%), Positives = 228/281 (81%), Gaps = 5/281 (2%)
Query 11 VKRLIIGACVISSLVACSQSENHKDMTSKGDTSPQASGTTYHIGSDITFPPFEYMENDQP 70
VK LI + L ACS+ ++GDT A+G Y +GSDITFPPFEY END+
Sbjct 7 VKPLIAALSLAVGLTACSKPAEQ----AEGDTKA-ATGKVYQVGSDITFPPFEYFENDKA 61
Query 71 AGFDIDIAHKIFEKTGDQIKFVDTRFSNLITGLEAKKFDLVFSGLYITPERMKKVDMVPY 130
GFDI+IA KIFE++GD+ F+D+RFSNL+TGL+AKKFDL+ SGLYIT ER++KVDMVPY
Sbjct 62 VGFDIEIAEKIFEQSGDKANFIDSRFSNLLTGLDAKKFDLLLSGLYITKERVEKVDMVPY 121
Query 131 YMTREALLSLVGSTYQPKVRDELCGKTISSQKGSIFPQQLHQISDESCVAKGKPPITVRE 190
++T E++++L S YQPK RD+LCGKTI++QKG++FP+QL QISDESCVAKGKP IT+RE
Sbjct 122 FITTESVVALADSDYQPKTRDDLCGKTIAAQKGALFPEQLRQISDESCVAKGKPAITIRE 181
Query 191 FETSPQAVQALLAKAVDAHYDDLSVAKSTVDKLKGRVAISSTDTFFPVLGGIAVRKGDTP 250
F TSP+AVQALLAKAVDA YDD SVA+STV+KLKGRV ISST+ FFP+LGGIAVRKGDT
Sbjct 182 FVTSPEAVQALLAKAVDAQYDDTSVAQSTVEKLKGRVVISSTEPFFPILGGIAVRKGDTE 241
Query 251 MYNKLKQGLEEMKKSGEYAALIEKYNLQPLTDADIEKYMPK 291
+YNK++QGL+ +KKSGEY LI KY LQ TD DI+ YMPK
Sbjct 242 LYNKIQQGLDALKKSGEYDQLIAKYKLQAPTDEDIQNYMPK 282
>A0A4Q4GSR6 ABC transporter substrate-binding protein [Acinetobacter
piscicola]
Length=283
Score = 376 bits (966), Expect = 1e-135
Identities = 187/281 (67%), Positives = 226/281 (80%), Gaps = 1/281 (0%)
Query 11 VKRLIIGACVISSLVACSQSENHKDMTSKGDTSPQASGTTYHIGSDITFPPFEYMENDQP 70
VK L+ AC++ L ACS+S + + + A+G TY IGSD+TFPPFEYMEND+P
Sbjct 4 VKPLVAAACLVWGLTACSKSADTASSAASASDAA-AAGQTYQIGSDMTFPPFEYMENDKP 62
Query 71 AGFDIDIAHKIFEKTGDQIKFVDTRFSNLITGLEAKKFDLVFSGLYITPERMKKVDMVPY 130
AGFDID+A++IF + Q F+D+RFSNLITGLEAKKFDLV SGLYIT ER++KVDMVPY
Sbjct 63 AGFDIDVANQIFAHSNAQANFIDSRFSNLITGLEAKKFDLVMSGLYITKERLEKVDMVPY 122
Query 131 YMTREALLSLVGSTYQPKVRDELCGKTISSQKGSIFPQQLHQISDESCVAKGKPPITVRE 190
YMT EALL+L S YQPK RD+LCGKTIS+QKGS+FP+QL Q+S ESCVAKGK IT+RE
Sbjct 123 YMTTEALLALADSEYQPKTRDDLCGKTISAQKGSMFPEQLRQMSAESCVAKGKAAITIRE 182
Query 191 FETSPQAVQALLAKAVDAHYDDLSVAKSTVDKLKGRVAISSTDTFFPVLGGIAVRKGDTP 250
F+TSP++VQALL+KAVDAHYDD SVA ST +KLKGRV ISST+ FFPVLGGIA+RKGDT
Sbjct 183 FDTSPESVQALLSKAVDAHYDDTSVAMSTAEKLKGRVQISSTEQFFPVLGGIAIRKGDTA 242
Query 251 MYNKLKQGLEEMKKSGEYAALIEKYNLQPLTDADIEKYMPK 291
M K+ QGL+ MK+SGE+ L+ KYNLQ + +I KYMPK
Sbjct 243 MLEKVTQGLDAMKQSGEFDKLLVKYNLQAPSAEEIAKYMPK 283
>A0A1T1H1I3 Amino acid ABC transporter substrate-binding protein
[Acinetobacter amyesii]
Length=283
Score = 376 bits (965), Expect = 1e-135
Identities = 188/281 (67%), Positives = 226/281 (80%), Gaps = 1/281 (0%)
Query 11 VKRLIIGACVISSLVACSQSENHKDMTSKGDTSPQASGTTYHIGSDITFPPFEYMENDQP 70
VK L+ AC+I L ACS+S + + + A+G TY IGSD+TFPPFEYMEND+P
Sbjct 4 VKPLVAAACLIWGLTACSKSADTASSAASASDAA-AAGQTYQIGSDMTFPPFEYMENDKP 62
Query 71 AGFDIDIAHKIFEKTGDQIKFVDTRFSNLITGLEAKKFDLVFSGLYITPERMKKVDMVPY 130
AGFDID+A++IF + Q F+D+RFSNLITGLEAKKFDLV SGLYIT ER++KVDMVPY
Sbjct 63 AGFDIDVANQIFAHSNAQANFIDSRFSNLITGLEAKKFDLVMSGLYITKERLEKVDMVPY 122
Query 131 YMTREALLSLVGSTYQPKVRDELCGKTISSQKGSIFPQQLHQISDESCVAKGKPPITVRE 190
YMT EALL+L S YQPK RD+LCGKTIS+QKGS+FP+QL Q+S ESCVAKGK IT+RE
Sbjct 123 YMTTEALLALADSEYQPKTRDDLCGKTISAQKGSMFPEQLRQMSAESCVAKGKAAITIRE 182
Query 191 FETSPQAVQALLAKAVDAHYDDLSVAKSTVDKLKGRVAISSTDTFFPVLGGIAVRKGDTP 250
F+TSP++VQALL+KAVDAHYDD SVA STV+KLKGRV ISST+ FFPVLGGIA+RKGDT
Sbjct 183 FDTSPESVQALLSKAVDAHYDDTSVAMSTVEKLKGRVQISSTEQFFPVLGGIAIRKGDTA 242
Query 251 MYNKLKQGLEEMKKSGEYAALIEKYNLQPLTDADIEKYMPK 291
M K+ QGL+ MK+SGE+ L+ YNLQ + +I KYMPK
Sbjct 243 MLEKVTQGLDAMKQSGEFDKLLVMYNLQAPSAEEIAKYMPK 283
>A0A178GKD9 Amino acid ABC transporter substrate-binding protein
[Acinetobacter sp. SFD]
Length=282
Score = 373 bits (957), Expect = 2e-134
Identities = 188/286 (66%), Positives = 227/286 (79%), Gaps = 5/286 (2%)
Query 5 VRVNPTVKRLIIGACVISSLVACSQSENHKDMTSKGDTSPQASGTTYHIGSDITFPPFEY 64
++V VK LI+ + L ACS T + + +++G Y IGSD+TFPPFEY
Sbjct 1 MKVALKVKPLIMALSLACGLSACSDKP-----TVQEAVTAESTGKVYQIGSDMTFPPFEY 55
Query 65 MENDQPAGFDIDIAHKIFEKTGDQIKFVDTRFSNLITGLEAKKFDLVFSGLYITPERMKK 124
MEND+PAGFDIDIA+KIFE++GD+ FVD+RFSNLITGLEAKKFDLV S LYIT +R++K
Sbjct 56 MENDKPAGFDIDIANKIFEQSGDKANFVDSRFSNLITGLEAKKFDLVMSALYITQDRLEK 115
Query 125 VDMVPYYMTREALLSLVGSTYQPKVRDELCGKTISSQKGSIFPQQLHQISDESCVAKGKP 184
VDMVPYYMT EAL+ L S YQPK RD+LCGKT++SQ GS+FP+QL Q+S ESCV+KGK
Sbjct 116 VDMVPYYMTTEALVVLADSEYQPKTRDDLCGKTVASQNGSMFPEQLRQMSQESCVSKGKK 175
Query 185 PITVREFETSPQAVQALLAKAVDAHYDDLSVAKSTVDKLKGRVAISSTDTFFPVLGGIAV 244
PIT+REF TSP+AVQALLAKAVDAHYDD SVAKSTV+KLK R+ ISST+ FFPVLGGIAV
Sbjct 176 PITIREFVTSPEAVQALLAKAVDAHYDDASVAKSTVEKLKDRLVISSTEPFFPVLGGIAV 235
Query 245 RKGDTPMYNKLKQGLEEMKKSGEYAALIEKYNLQPLTDADIEKYMP 290
KGD + NK+K GL+ +K+SGEY LI KYNLQ TD +I+KYMP
Sbjct 236 PKGDQKLLNKVKNGLDAIKQSGEYDQLIAKYNLQAPTDEEIQKYMP 281
>Q9WZ62 Amino acid ABC transporter, periplasmic amino acid-binding
protein [Thermotoga maritima (strain ATCC 43589 / DSM 3109
/ JCM 10099 / NBRC 100826 / MSB8)]
Length=246
Score = 100 bits (248), Expect = 2e-28
Identities = 74/225 (33%), Positives = 110/225 (49%), Gaps = 15/225 (7%)
Query 53 IGSDITFPPFEYM-ENDQPAGFDIDIAHKIFEKTGDQIKFVDTRFSNLITGLEAKKFDLV 111
+G FPPFE++ EN GFD+D+A +I + G ++K VD F LI L KK D++
Sbjct 32 VGLSADFPPFEFVDENGNIVGFDVDLAKEIARRLGVELKIVDMTFDGLIPSLLTKKIDVI 91
Query 112 FSGLYITPERMKKVDMV-PYYMTREALLSLVGSTYQPKVRDELCGKTISSQKGSIFPQQL 170
SG+ IT ER K V PY+ + ++ S ++PK ++L GKT++ Q G+ ++
Sbjct 92 ISGMTITEERKKVVAFSDPYFDAGQVIVVRKDSDFRPKTYEDLVGKTVAVQIGTTGDIEV 151
Query 171 HQISDESCVAKGKPPITVREFETSPQAVQALLAKAVDAHYDDLSVAKSTVDKLKGRVAIS 230
+ I V F+ A L DA D + A++ V K +
Sbjct 152 SKYDG----------IKVVRFDKFTDAFLELKRGRADAVVLDSATARAFV--AKNPDLVI 199
Query 231 STDTFFPVLGGIAVRKGDTPMYNKLKQGLEEMKKSGEYAALIEKY 275
S+ GIAVRK DT + + L E+KKS Y LIEK+
Sbjct 200 SSGVLSSEQYGIAVRKEDTDLLEFINSVLRELKKS-PYDVLIEKW 243
>Q72JG5 Amino acid ABC transporter, binding protein [Thermus thermophilus
(strain ATCC BAA-163 / DSM 7039 / HB27)]
Length=254
Score = 98.6 bits (244), Expect = 1e-27
Identities = 67/226 (30%), Positives = 111/226 (49%), Gaps = 16/226 (7%)
Query 53 IGSDITFPPFEYM-ENDQPAGFDIDIAHKIFEKTGDQIKFVDTRFSNLITGLEAKKFDLV 111
IG++ FPPF Y E +Q GF++D+ + I E+ G + +++ F L+ L +FD V
Sbjct 34 IGTEGAFPPFNYFDERNQLTGFEVDLGNAIAERLGLKPRWIAQSFDTLLIQLNQGRFDFV 93
Query 112 FSGLYITPERMKKVDMV-PYYMTREALLSLVGSTYQPKVRDELCGKTISSQKGSIFPQQL 170
+ IT ER + VD P+Y T ++S G P+ +L GK + Q G+ + +
Sbjct 94 IASHGITEERARAVDFTNPHYCTGGVIVSRKGG---PRTAKDLQGKVVGVQVGTTYMEAA 150
Query 171 HQISDESCVAKGKPPIT-VREFETSPQAVQALLAKAVDAHYDDLSVAKSTVDKLKGRVAI 229
+I P I VR ++ P A+Q LLA +D D VAK + + K +
Sbjct 151 QKI----------PGIKEVRTYQRDPDALQDLLAGRIDTWITDRFVAKEAIKERKLENTL 200
Query 230 SSTDTFFPVLGGIAVRKGDTPMYNKLKQGLEEMKKSGEYAALIEKY 275
+ F +AV KG+ + + L + L E+ + G YA + +K+
Sbjct 201 QVGELVFQERVAMAVAKGNKSLLDALNRALAELMQDGTYARISQKW 246
Score = 17.7 bits (34), Expect = 5.8
Identities = 6/11 (55%), Positives = 9/11 (82%), Gaps = 0/11 (0%)
Query 257 QGLEEMKKSGE 267
+ EE+K+SGE
Sbjct 21 RSFEEIKRSGE 31
>X2KTY2 ABC transporter substrate-binding protein [Streptomyces
sp. LZ35]
Length=317
Score = 99.8 bits (247), Expect = 1e-27
Identities = 80/294 (27%), Positives = 128/294 (44%), Gaps = 25/294 (9%)
Query 9 PTVKRLIIGACVISS---LVACSQSENHKDMTSKGDTSPQ--------ASGTTYHIGSDI 57
P + IGA ++ L C N S +++P S +GSDI
Sbjct 12 PKSRMASIGAVAVAGALLLTGCGDQTNKATGGSNTNSAPLFNQLPKEIQSAKVIKVGSDI 71
Query 58 TFPPFEYMENDQPAGFDIDIAHKIFEKTGDQIKFVDTRFSNLITGLEAKKFDLVFSGLY- 116
+PP E+ +N Q G D DIA + ++ G + +F + F L++GL +K++D+ S +
Sbjct 72 NYPPVEFKKNGQVMGIDPDIADALGKQLGVKFEFNNGTFDTLLSGLRSKRYDIAMSAMTD 131
Query 117 -------ITPERMKK----VDMVPYYMTREALLSLVGSTYQPKVRDELCGKTISSQKGSI 165
+ P+ KK VD V Y+ ++ + G T K D+LCGK I Q+G++
Sbjct 132 NKGRQEGVDPDTGKKAGEGVDFVDYFTAGVSIYTKKGDTKGIKTWDDLCGKKIVVQRGTV 191
Query 166 FPQQLHQISDESCVAKGKPPITVREFETSPQAVQALLAKAVDAHYDDLSVAKSTVDKLKG 225
L + +C+ K I++ F +A L A D VA V G
Sbjct 192 -SHDLAKSQSATCLKNKKGKISIEAFGNDTEAQTRLRGGGAVAGSSDFPVAAYAVKTSGG 250
Query 226 RVAISST-DTFFPVLGGIAVRKGDTPMYNKLKQGLEEMKKSGEYAALIEKYNLQ 278
D GIAV K +T + + LKQ L + +GEY +I K+ ++
Sbjct 251 GKDFELVGDQVEAAPYGIAVAKKNTQLRDALKQALALIIANGEYDKIIAKWGVK 304
>Q9RGW8 Periplasmic binding protein [Streptomyces coelicolor (strain
ATCC BAA-471 / A3(2) / M145)]
Length=321
Score = 90.1 bits (222), Expect = 4e-24
Identities = 73/260 (28%), Positives = 122/260 (47%), Gaps = 34/260 (13%)
Query 50 TYHIGSDITFPPFEYMEND--QPAGFDIDIAHKIFEKTGDQIKFVDTRFSNLITGLEAKK 107
T +GSDI + P E+ + G D D+A + ++ G + +F + F LITGL +K+
Sbjct 68 TIKVGSDIAYAPVEFQGRTPAKTVGIDPDLADALGKQLGVKFEFENGTFDTLITGLRSKR 127
Query 108 FDLVFSGLYITPERM--------KKV----DMVPYYMTREALLSLVGSTYQPKVRDELCG 155
+D+ S + T +R KKV D V Y+ ++ + G K +LCG
Sbjct 128 YDIAMSAMTDTKDRQEGIDGDTGKKVGPGGDFVDYFTAGVSIYTKKGDDQGIKTWSDLCG 187
Query 156 KTISSQKGSIFPQQLHQISDESCVAKGKPPITVREFETSPQAVQALLAKAVDAHYDDLSV 215
K + Q+G++ + L + +E C A K I+++ F+ QA L A DA D V
Sbjct 188 KKLVVQRGTV-SEDLAKAENEKCPAGKK--ISMQPFDNDQQAQTRLRAGGADAGSSDFPV 244
Query 216 AKSTVDKLKGRVAISSTDTFFPVLG--------GIAVRKGDTPMYNKLKQGLEEMKKSGE 267
A V S F ++G GIAV K +T + + LK L+ + +GE
Sbjct 245 AAYA-------VKTSGGGKDFELVGEQVEAAPYGIAVAKDNTQLRDALKAALDAVIANGE 297
Query 268 YAALIEKYNLQ--PLTDADI 285
Y +++K+ + +T+A +
Sbjct 298 YKKIMDKWGVSEGAITEATV 317
>Q8RCC4 ABC-type amino acid transport system, periplasmic component
[Caldanaerobacter subterraneus subsp. tengcongensis (strain
DSM 15242 / JCM 11007 / NBRC 100824 / MB4)]
Length=260
Score = 85.9 bits (211), Expect = 6e-23
Identities = 71/230 (31%), Positives = 119/230 (52%), Gaps = 20/230 (9%)
Query 53 IGSDITFPPFEYME----NDQPAGFDIDIAHKIFEKTGDQIKFVDTRFSNLITGLEAKKF 108
+G+ FPPFE+ + D+ GFDIDIA+ I +K G +++ D F LI L+A +
Sbjct 41 MGTSADFPPFEFHKVEGGKDEIVGFDIDIANAIAKKLGVKLEIKDMDFKGLIPALQAGRV 100
Query 109 DLVFSGLYITPERMKKVDMVP-YYMTREALLSLVGSTYQPKVRDELCGKTISSQKGSIFP 167
D+V +G+ T ER K VD YY +R+ + +V + D+L KTI+ Q G+
Sbjct 101 DMVIAGMTPTAERKKSVDFSDLYYDSRQVV--VVKNDSPISKFDDLKVKTIAVQIGT--- 155
Query 168 QQLHQISDESCVAKGKPPITVREFETSPQAVQALLAKAVDAHYDDLSVAKSTVDKLKGRV 227
S+E+ AK P + +++ L DA + +VAK+ + + K +
Sbjct 156 -----TSEEA--AKKIPNVKLKQLNRVSDEFMDLQNGRCDAIVVEDTVAKAYLKEYKD-M 207
Query 228 AISSTDTFFPVLGG--IAVRKGDTPMYNKLKQGLEEMKKSGEYAALIEKY 275
I D V G +AV KG+ + + + + ++E+K+SGEY L++K+
Sbjct 208 KILYMDEINNVENGSAVAVAKGNKSLLDVVNEVIKELKQSGEYDKLVDKW 257
>D2WXN1 Oligopeptide-binding protein 6 [Brachyspira pilosicoli]
Length=271
Score = 84.3 bits (207), Expect = 3e-22
Identities = 68/271 (25%), Positives = 124/271 (46%), Gaps = 15/271 (6%)
Query 11 VKRLIIGACVISSLVACSQSENHKDMTSKGDTSPQA---SGTTYHIGSDITFPPFEYMEN 67
+KR+I + ++CS+++N +S D S Q SG +G D TF P + +
Sbjct 1 MKRIITLFFIFIFAISCSKTQNASQASSAADNSLQKVKESGKLV-LGLDDTFAPMGFRDE 59
Query 68 D-QPAGFDIDIAHKIFEKTGDQIKFVDTRFSNLITGLEAKKFDLVFSGLYITPERMKKVD 126
+ GFDID+A ++ + G ++ +S+++ L+ D+V++G I R ++V+
Sbjct 60 EGNIVGFDIDLAKEVANRLGVELVAKPVDWSSVVLSLKKGDVDVVWNGFAINETRKEQVN 119
Query 127 MVPYYMTREALLSLVGSTYQPKVRDELCGKTISSQKGSIFPQQLH--QISDESCVAKGKP 184
Y+ ++ K +D+L GK + Q GS + L IS E+
Sbjct 120 FTKPYLNNRLMIVKNADRDDIKTKDDLKGKILGVQTGSSNYESLEADPISKET------- 172
Query 185 PITVREFETSPQAVQALLAKAVDAHYDDLSVAKSTVDKLKGRVAISSTDTFFPVLGGIAV 244
+R+++ A L AK +DA D VA+ + K + G+ V
Sbjct 173 -KEIRQYDIYANAFLDLEAKRIDAVIVDEIVARYYISKENADFELLEEYPITAKSFGVGV 231
Query 245 RKGDTPMYNKLKQGLEEMKKSGEYAALIEKY 275
RK DT + N + + L++M+ G+ A + K+
Sbjct 232 RKTDTELLNAIDKALDDMRDDGKAAEISTKW 262
>Q837S0 Amino acid ABC transporter, amino acid-binding/permease
protein [Enterococcus faecalis (strain ATCC 700802 / V583)]
Length=722
Score = 86.7 bits (213), Expect = 3e-22
Identities = 64/242 (26%), Positives = 110/242 (45%), Gaps = 11/242 (5%)
Query 36 MTSKGDTSPQASGTTYHIGSDITFPPFEYMEND-QPAGFDIDIAHKIFEKTGDQIKFVDT 94
+T TS A G Y IG+D+TF PFE+ ++ + G D+D+ I + ++
Sbjct 18 LTFISGTSAHAEGKKYTIGTDLTFAPFEFQDSKGKYIGIDVDLLDAIAKDQDFEVDLKPL 77
Query 95 RFSNLITGLEAKKFDLVFSGLYITPERMKKVDMVPYYMTREALLSLVGSTYQPKVRDELC 154
F + + +++K+ D + +G+ IT ER K D Y L++ + K D+L
Sbjct 78 GFDSAVQAIQSKQIDGMIAGMSITDERKKSFDFSDPYFDSGLQLAVKKGNDKIKSYDDLK 137
Query 155 GKTISSQKGSIFPQQLHQISDESCVAKGKPPITVREFETSPQAVQALLAKAVDAHYDDLS 214
GKT++++ G+ L + K K T++ F+ + +AL DA DD
Sbjct 138 GKTVAAKVGTESANFLEK-------NKEKYDYTIKNFDDATGLYKALENGEADAIVDDYP 190
Query 215 VAKSTVDKLKGRVAISSTDTFFPVLGGIAVRKGDTP-MYNKLKQGLEEMKKSGEYAALIE 273
V V + + +T G AV+KG P + K GL+ +K +G Y ++
Sbjct 191 VLGYAVKNGQKLQLVGDKETGSSY--GFAVKKGQNPELIKKFNAGLKNLKDNGTYDKILN 248
Query 274 KY 275
Y
Sbjct 249 NY 250
Score = 73.2 bits (178), Expect = 9e-18
Identities = 67/251 (27%), Positives = 108/251 (43%), Gaps = 22/251 (9%)
Query 35 DMTSKGDTSPQASGTT-----YHIGSDITFPPFEYME-NDQPAGFDIDIAHKIFEKTGDQ 88
D T+ D Q T Y I SD TF PFE+ G D+D+ + E G
Sbjct 255 DETNTQDAGEQMKKITPKKEKYVIASDSTFAPFEFQNAQGDYVGIDVDLVKRAAELQGFT 314
Query 89 IKFVDTRFSNLITGLEAKKFDLVFSGLYITPERMKKVDMVPYYMTREALLSLVGSTYQPK 148
++F FS+ + +E+ + D + +G+ IT +R K D Y +++ + K
Sbjct 315 VEFKFIGFSSAVQAVESGQADGMVAGMTITDDRKKAFDFSVPYFDSGIQIAVKKGNDKIK 374
Query 149 VRDELCGKTISSQKGSIFPQQLHQISDESCVAKGKPPITVREFETSPQAVQALLAKAVDA 208
D+L GK + + G+ + +D K K +++ +T+ AL VDA
Sbjct 375 SYDDLKGKKVGVKIGT-------ESADFLEKNKKKYDYSIKYLDTTDALYSALEIGEVDA 427
Query 209 HYDDLSVAKSTV---DKLKGRVAISSTDTFFPVLGGIAVRKGDTP-MYNKLKQGLEEMKK 264
DD V V L + ++ G AV+KG P + +GL+EMK+
Sbjct 428 MMDDYPVIGYGVAQNQPLATPIPREKGGSY-----GFAVKKGQNPELLEMFNEGLKEMKR 482
Query 265 SGEYAALIEKY 275
+GEY +I Y
Sbjct 483 TGEYDKIIGTY 493
>O50181 ABC transporter substrate-binding protein [Pseudomonas
aeruginosa]
Length=259
Score = 82.8 bits (203), Expect = 8e-22
Identities = 72/240 (30%), Positives = 109/240 (45%), Gaps = 20/240 (8%)
Query 46 ASGTTYHIGSDITFPPFEYMEND-QPAGFDIDIAHKIFEKTGDQIKFVDTRFSNLITGLE 104
A+ IG + +PPF D Q AGFD+DI + + E+ Q K+V+ F LI L+
Sbjct 21 AADKPVRIGIEAAYPPFSLKTPDGQLAGFDVDIGNALCEEMKVQCKWVEQEFDGLIPALK 80
Query 105 AKKFDLVFSGLYITPERMKKVDMV-PYYMTREALLSLVG-STYQPKVRDELCGKTISSQK 162
+K D + S + IT ER + VD YY T + G S PK +L GK +
Sbjct 81 VRKIDAILSSMTITDERKRSVDFTNKYYNTPARFVMKEGASLNDPKA--DLKGKKAGVLR 138
Query 163 GSIFPQQLHQISDESCVAKGKPP-ITVREFETSPQAVQALLAKAVDAHYDDL-----SVA 216
GS +D A+ P + V + + +A L+A +DA D
Sbjct 139 GS--------TADRYASAELTPAGVEVVRYNSQQEANMDLVAGRLDAVVADSVNLEDGFL 190
Query 217 KSTVDKLKGRVAISSTDT-FFPVLGGIAVRKGDTPMYNKLKQGLEEMKKSGEYAALIEKY 275
K+ K V TD +F GIAVRKGD+ + K ++ ++ +G+Y + +KY
Sbjct 191 KTDAGKGYAFVGPQLTDAKYFGEGVGIAVRKGDSELAGKFNAAIDALRANGKYKQIQDKY 250
>P71482 Amino acid ABC transporter substrate-binding protein [Limosilactobacillus
reuteri]
Length=263
Score = 81.3 bits (199), Expect = 3e-21
Identities = 70/269 (26%), Positives = 127/269 (47%), Gaps = 25/269 (9%)
Query 10 TVKRLIIGACVISSLVACSQSENHKDMTSKGDTSPQASGTTYHIGSDITFPPFEYMENDQ 69
T+ L +G + V+ + S + ++ KG+ + IG + T+ P+ Y +N++
Sbjct 10 TIAALTVGTSAGITSVSAASSAVNSELVHKGELT---------IGLEGTYSPYSYRKNNK 60
Query 70 PAGFDIDIAHKIFEKTGDQIKFVDTRFSNLITGLEAKKFDLVFSGLYITPERMKKVDM-V 128
GF++D+ + +K G + FV T++ +LI GL + KFD+V + + TPER K+ +
Sbjct 61 LTGFEVDLGKAVAKKMGLKANFVPTKWDSLIAGLGSGKFDVVMNNITQTPERAKQYNFST 120
Query 129 PYYMTREALLSLVGSTYQPKVRDELCGKTISSQKGSIFPQQLHQISDESCVAKGKPPITV 188
PY +R AL +V + K ++ GK I + G+ ++ + V K K +T
Sbjct 121 PYIKSRFAL--IVPTDSNIKSLKDIKGKKIIAGTGT---------NNANVVKKYKGNLTP 169
Query 189 R-EFETSPQAV-QALLAKAVDAHYDDLSVAKSTVDKLKGRVAISSTDTFFPVLGGIAVRK 246
+F +S + Q A V++ + A S + KG I + P K
Sbjct 170 NGDFASSLDMIKQGRAAGTVNSR--EAWYAYSKKNSTKGLKMIDVSSEQDPAKISALFNK 227
Query 247 GDTPMYNKLKQGLEEMKKSGEYAALIEKY 275
DT + + + L+E+++ G L EKY
Sbjct 228 KDTAIQSSYNKALKELQQDGTVKKLSEKY 256
>D0VWX8 ArtJ [Geobacillus stearothermophilus]
Length=252
Score = 80.5 bits (197), Expect = 5e-21
Identities = 62/226 (27%), Positives = 108/226 (48%), Gaps = 14/226 (6%)
Query 53 IGSDITFPPFEYMENDQPAGFDIDIAHKIFEKTGDQIKFVDTRFSNLITGLEAKKFDLVF 112
+G+D F PFEYM+ + GFD+D+ + + G + + + L L++K+ D+
Sbjct 26 VGTDAAFAPFEYMQKGKIVGFDVDLLDAVMKAAGLDYELKNIGWDPLFASLQSKEVDMGI 85
Query 113 SGLYITPERMKKVDMV-PYYMTREALLSLVGSTYQPKVRDELCGKTISSQKGSIFPQQLH 171
SG+ IT ER + D PY+ + +L GS + + +L GKTI Q + +
Sbjct 86 SGITITDERKQSYDFSDPYFEATQVILVKQGSPVKNAL--DLKGKTIGVQNATTGQEAAE 143
Query 172 QISDESCVAKGKPPITVREFETSPQAVQALLAKAVDAHYDDLSVAKSTV--DKLKGRVAI 229
++ GK P +++FET+ A+ LL VDA D +VA V + K I
Sbjct 144 KLF-------GKGP-HIKKFETTVVAIMELLNGGVDAVITDNAVANEYVKNNPNKKLQVI 195
Query 230 SSTDTFFPVLGGIAVRKGDTPMYNKLKQGLEEMKKSGEYAALIEKY 275
F G+ K ++ + K+ + L+ + SG+Y + +K+
Sbjct 196 EDPKNFASEYYGMIFPK-NSELKAKVDEALKNVINSGKYTEIYKKW 240
Lambda K H a alpha
0.318 0.134 0.383 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1191378
Database: 3dba79b90f561e5cb6c20691a6c33351.TrEMBL.fasta
Posted date: Jun 2, 2024 2:25 PM
Number of letters in database: 5,717
Number of sequences in database: 19
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
