BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 835fe3c52e2cd5eb6bf8b04658fb2195.TrEMBL.fasta
17 sequences; 3,769 total letters
Query= ACIAD3478
Length=236
Score E
Sequences producing significant alignments: (Bits) Value
Q6F738 Ribosomal RNA small subunit methyltransferase E [Acinetoba... 473 5e-176
A0A7G2SA38 Ribosomal RNA small subunit methyltransferase E [Acine... 473 5e-176
A0A0M1I7R9 Ribosomal RNA small subunit methyltransferase E [Acine... 365 2e-133
A0A427LKM6 Ribosomal RNA small subunit methyltransferase E [Acine... 365 3e-133
N9BTW7 Ribosomal RNA small subunit methyltransferase E [Acinetoba... 363 1e-132
A0A7H2WR60 Ribosomal RNA small subunit methyltransferase E [Acine... 363 3e-132
A0A7H2TB02 Ribosomal RNA small subunit methyltransferase E [Acine... 362 4e-132
N9CMZ7 Ribosomal RNA small subunit methyltransferase E [Acinetoba... 362 6e-132
N8R200 Ribosomal RNA small subunit methyltransferase E [Acinetoba... 362 8e-132
A0A1V2UZH5 Ribosomal RNA small subunit methyltransferase E [Acine... 362 8e-132
A0A7H2ZQN3 Ribosomal RNA small subunit methyltransferase E [Acine... 362 8e-132
A0A1P8EKJ3 Ribosomal RNA small subunit methyltransferase E [Acine... 361 2e-131
O52786 16S rRNA (uracil(1498)-N(3))-methyltransferase [Acinetobac... 224 8e-79
O50659 16S rRNA (Uracil(1498)-N(3))-methyltransferase [Acinetobac... 60.5 4e-16
Q9S5A1 Ribosomal RNA small subunit methyltransferase E [Listeria ... 58.9 6e-14
Q5ZRE6 Ribosomal RNA small subunit methyltransferase E [Legionell... 57.4 2e-13
H9A1B0 Ribosomal RNA small subunit methyltransferase E [Shewanell... 51.2 3e-11
>Q6F738 Ribosomal RNA small subunit methyltransferase E [Acinetobacter
baylyi (strain ATCC 33305 / BD413 / ADP1)]
Length=235
Score = 473 bits (1218), Expect = 5e-176
Identities = 235/235 (100%), Positives = 235/235 (100%), Gaps = 0/235 (0%)
Query 1 MNIVLLEPKDTAQAEWRIHSARQLSHLHKQLNIQVDDTLKVGIRNGKRYLTRIVAIEEQE 60
MNIVLLEPKDTAQAEWRIHSARQLSHLHKQLNIQVDDTLKVGIRNGKRYLTRIVAIEEQE
Sbjct 1 MNIVLLEPKDTAQAEWRIHSARQLSHLHKQLNIQVDDTLKVGIRNGKRYLTRIVAIEEQE 60
Query 61 IRVTPIQQEACPAKLPVTLIVAMPRPKVLRRLIMDSVTLGVERICLTHSYRVDKSYWQTP 120
IRVTPIQQEACPAKLPVTLIVAMPRPKVLRRLIMDSVTLGVERICLTHSYRVDKSYWQTP
Sbjct 61 IRVTPIQQEACPAKLPVTLIVAMPRPKVLRRLIMDSVTLGVERICLTHSYRVDKSYWQTP 120
Query 121 FLQQLDDYITLGLEQAGDTIVPDIQLYKRFKPFVEDVLPSLIAPLRPAFVAHPYAETAMP 180
FLQQLDDYITLGLEQAGDTIVPDIQLYKRFKPFVEDVLPSLIAPLRPAFVAHPYAETAMP
Sbjct 121 FLQQLDDYITLGLEQAGDTIVPDIQLYKRFKPFVEDVLPSLIAPLRPAFVAHPYAETAMP 180
Query 181 HAIEHPCSIIIGPEGGFIPYEVDLLIKNGCQAYHLGSRILRTETAVSYLLGRLFV 235
HAIEHPCSIIIGPEGGFIPYEVDLLIKNGCQAYHLGSRILRTETAVSYLLGRLFV
Sbjct 181 HAIEHPCSIIIGPEGGFIPYEVDLLIKNGCQAYHLGSRILRTETAVSYLLGRLFV 235
>A0A7G2SA38 Ribosomal RNA small subunit methyltransferase E [Acinetobacter
sp]
Length=235
Score = 473 bits (1218), Expect = 5e-176
Identities = 235/235 (100%), Positives = 235/235 (100%), Gaps = 0/235 (0%)
Query 1 MNIVLLEPKDTAQAEWRIHSARQLSHLHKQLNIQVDDTLKVGIRNGKRYLTRIVAIEEQE 60
MNIVLLEPKDTAQAEWRIHSARQLSHLHKQLNIQVDDTLKVGIRNGKRYLTRIVAIEEQE
Sbjct 1 MNIVLLEPKDTAQAEWRIHSARQLSHLHKQLNIQVDDTLKVGIRNGKRYLTRIVAIEEQE 60
Query 61 IRVTPIQQEACPAKLPVTLIVAMPRPKVLRRLIMDSVTLGVERICLTHSYRVDKSYWQTP 120
IRVTPIQQEACPAKLPVTLIVAMPRPKVLRRLIMDSVTLGVERICLTHSYRVDKSYWQTP
Sbjct 61 IRVTPIQQEACPAKLPVTLIVAMPRPKVLRRLIMDSVTLGVERICLTHSYRVDKSYWQTP 120
Query 121 FLQQLDDYITLGLEQAGDTIVPDIQLYKRFKPFVEDVLPSLIAPLRPAFVAHPYAETAMP 180
FLQQLDDYITLGLEQAGDTIVPDIQLYKRFKPFVEDVLPSLIAPLRPAFVAHPYAETAMP
Sbjct 121 FLQQLDDYITLGLEQAGDTIVPDIQLYKRFKPFVEDVLPSLIAPLRPAFVAHPYAETAMP 180
Query 181 HAIEHPCSIIIGPEGGFIPYEVDLLIKNGCQAYHLGSRILRTETAVSYLLGRLFV 235
HAIEHPCSIIIGPEGGFIPYEVDLLIKNGCQAYHLGSRILRTETAVSYLLGRLFV
Sbjct 181 HAIEHPCSIIIGPEGGFIPYEVDLLIKNGCQAYHLGSRILRTETAVSYLLGRLFV 235
>A0A0M1I7R9 Ribosomal RNA small subunit methyltransferase E [Acinetobacter
sp. C15]
Length=235
Score = 365 bits (938), Expect = 2e-133
Identities = 175/234 (75%), Positives = 197/234 (84%), Gaps = 0/234 (0%)
Query 1 MNIVLLEPKDTAQAEWRIHSARQLSHLHKQLNIQVDDTLKVGIRNGKRYLTRIVAIEEQE 60
MN+VL+ P++ W+IH+ RQ+ HL +QLN+QV DTLKVGI RYLTR++ I Q
Sbjct 1 MNLVLIPPQENLSGPWQIHAPRQVMHLREQLNLQVGDTLKVGILGQARYLTRVMTITAQS 60
Query 61 IRVTPIQQEACPAKLPVTLIVAMPRPKVLRRLIMDSVTLGVERICLTHSYRVDKSYWQTP 120
I V P+QQEACP KLPVTLIVA+PRPKVLRRLIMDSVTLGVERICL HSYRVDKSYWQTP
Sbjct 61 IEVMPLQQEACPKKLPVTLIVALPRPKVLRRLIMDSVTLGVERICLIHSYRVDKSYWQTP 120
Query 121 FLQQLDDYITLGLEQAGDTIVPDIQLYKRFKPFVEDVLPSLIAPLRPAFVAHPYAETAMP 180
FLQQLDDY+ LGLEQAGDTI PDIQLYKRFKPFVED+LP +I P RPA+VAHPY+ MP
Sbjct 121 FLQQLDDYVQLGLEQAGDTIAPDIQLYKRFKPFVEDILPGMIQPERPAYVAHPYSAQTMP 180
Query 181 HAIEHPCSIIIGPEGGFIPYEVDLLIKNGCQAYHLGSRILRTETAVSYLLGRLF 234
I H CS+IIGPEGGFIPYEV+L+ KNGCQ Y LGSRILRTETAVSY+LGRLF
Sbjct 181 INISHGCSLIIGPEGGFIPYEVELMQKNGCQTYQLGSRILRTETAVSYVLGRLF 234
>A0A427LKM6 Ribosomal RNA small subunit methyltransferase E [Acinetobacter
soli]
Length=235
Score = 365 bits (937), Expect = 3e-133
Identities = 175/234 (75%), Positives = 196/234 (84%), Gaps = 0/234 (0%)
Query 1 MNIVLLEPKDTAQAEWRIHSARQLSHLHKQLNIQVDDTLKVGIRNGKRYLTRIVAIEEQE 60
MN+VL+ P++ W+IH RQ+ HL +QLN+QV DTLKVGI RYLTR++ I Q
Sbjct 1 MNLVLIPPQENLSGPWQIHEPRQVMHLREQLNLQVGDTLKVGILGQARYLTRVMTITAQS 60
Query 61 IRVTPIQQEACPAKLPVTLIVAMPRPKVLRRLIMDSVTLGVERICLTHSYRVDKSYWQTP 120
I V P+QQEACP KLPVTLIVA+PRPKVLRRLIMDSVTLGVERICL HSYRVDKSYWQTP
Sbjct 61 IEVMPLQQEACPKKLPVTLIVALPRPKVLRRLIMDSVTLGVERICLIHSYRVDKSYWQTP 120
Query 121 FLQQLDDYITLGLEQAGDTIVPDIQLYKRFKPFVEDVLPSLIAPLRPAFVAHPYAETAMP 180
FLQQLDDY+ LGLEQAGDTI PDIQLYKRFKPFVED+LP +I P RPA+VAHPY+ MP
Sbjct 121 FLQQLDDYVQLGLEQAGDTIAPDIQLYKRFKPFVEDILPGMIQPERPAYVAHPYSAQTMP 180
Query 181 HAIEHPCSIIIGPEGGFIPYEVDLLIKNGCQAYHLGSRILRTETAVSYLLGRLF 234
I H CS+IIGPEGGFIPYEV+L+ KNGCQ Y LGSRILRTETAVSY+LGRLF
Sbjct 181 INISHGCSLIIGPEGGFIPYEVELMQKNGCQTYQLGSRILRTETAVSYVLGRLF 234
>N9BTW7 Ribosomal RNA small subunit methyltransferase E [Acinetobacter
soli NIPH 2899]
Length=235
Score = 363 bits (933), Expect = 1e-132
Identities = 174/234 (74%), Positives = 196/234 (84%), Gaps = 0/234 (0%)
Query 1 MNIVLLEPKDTAQAEWRIHSARQLSHLHKQLNIQVDDTLKVGIRNGKRYLTRIVAIEEQE 60
MN+VL+ P++ W+IH RQ+ HL +QLN+QV DTLKVGI RYLTR++ I Q
Sbjct 1 MNLVLIPPQENLSGPWQIHEPRQVMHLREQLNLQVGDTLKVGILGQARYLTRVMTITAQS 60
Query 61 IRVTPIQQEACPAKLPVTLIVAMPRPKVLRRLIMDSVTLGVERICLTHSYRVDKSYWQTP 120
I V P+QQEACP KLPVTLIVA+PRPKVLRRLIMDSVTLGVERICL HSYRVDKSYWQTP
Sbjct 61 IEVMPLQQEACPKKLPVTLIVALPRPKVLRRLIMDSVTLGVERICLIHSYRVDKSYWQTP 120
Query 121 FLQQLDDYITLGLEQAGDTIVPDIQLYKRFKPFVEDVLPSLIAPLRPAFVAHPYAETAMP 180
FLQQLDDY+ LGLEQAGDTI P+IQLYKRFKPFVED+LP +I P RPA+VAHPY+ MP
Sbjct 121 FLQQLDDYVQLGLEQAGDTIAPEIQLYKRFKPFVEDILPGMIQPERPAYVAHPYSAQTMP 180
Query 181 HAIEHPCSIIIGPEGGFIPYEVDLLIKNGCQAYHLGSRILRTETAVSYLLGRLF 234
I H CS+IIGPEGGFIPYEV+L+ KNGCQ Y LGSRILRTETAVSY+LGRLF
Sbjct 181 INISHGCSLIIGPEGGFIPYEVELMQKNGCQTYQLGSRILRTETAVSYVLGRLF 234
>A0A7H2WR60 Ribosomal RNA small subunit methyltransferase E [Acinetobacter
seifertii]
Length=235
Score = 363 bits (931), Expect = 3e-132
Identities = 174/234 (74%), Positives = 201/234 (86%), Gaps = 0/234 (0%)
Query 1 MNIVLLEPKDTAQAEWRIHSARQLSHLHKQLNIQVDDTLKVGIRNGKRYLTRIVAIEEQE 60
MNIVLLEP+D W IHS RQL HL + L+I V LKVG+RNG RY+T IV+I+EQE
Sbjct 1 MNIVLLEPEDVQSDTWSIHSKRQLQHLREHLDITVGQNLKVGVRNGARYVTEIVSIDEQE 60
Query 61 IRVTPIQQEACPAKLPVTLIVAMPRPKVLRRLIMDSVTLGVERICLTHSYRVDKSYWQTP 120
+ + PI++EA PAKLPV LIVA+PRPKVLRRLIMDSVTLGVERI L HSYRVDKSYWQTP
Sbjct 61 VCIRPIREEAVPAKLPVHLIVALPRPKVLRRLIMDSVTLGVERISLIHSYRVDKSYWQTP 120
Query 121 FLQQLDDYITLGLEQAGDTIVPDIQLYKRFKPFVEDVLPSLIAPLRPAFVAHPYAETAMP 180
FLQQ+D Y+TLGLEQAGDTIVP+IQ+YKRFKPFVEDVLP+LI+ PA+VAHPYAE +MP
Sbjct 121 FLQQIDQYVTLGLEQAGDTIVPEIQMYKRFKPFVEDVLPTLISETSPAYVAHPYAEQSMP 180
Query 181 HAIEHPCSIIIGPEGGFIPYEVDLLIKNGCQAYHLGSRILRTETAVSYLLGRLF 234
I+H CSI++GPEGGFIPYEVDLL KNGCQA LG+RILRTET++SY+LGRLF
Sbjct 181 SNIDHTCSIVVGPEGGFIPYEVDLLTKNGCQAVSLGNRILRTETSISYILGRLF 234
>A0A7H2TB02 Ribosomal RNA small subunit methyltransferase E [Acinetobacter
seifertii]
Length=235
Score = 362 bits (930), Expect = 4e-132
Identities = 173/234 (74%), Positives = 203/234 (87%), Gaps = 0/234 (0%)
Query 1 MNIVLLEPKDTAQAEWRIHSARQLSHLHKQLNIQVDDTLKVGIRNGKRYLTRIVAIEEQE 60
MNIVLLEP+DT W IHS RQL HL + L+I V LKVGIRNG RY+T IV+I+EQE
Sbjct 1 MNIVLLEPEDTQSEIWSIHSKRQLQHLREHLDITVGQNLKVGIRNGARYVTEIVSIDEQE 60
Query 61 IRVTPIQQEACPAKLPVTLIVAMPRPKVLRRLIMDSVTLGVERICLTHSYRVDKSYWQTP 120
+ + PI++EA PAKLPV LIVA+PRPKVLRRLIMDSVTLGVE+I L HSYRVDKSYWQTP
Sbjct 61 VCIRPIREEAVPAKLPVHLIVALPRPKVLRRLIMDSVTLGVEKISLIHSYRVDKSYWQTP 120
Query 121 FLQQLDDYITLGLEQAGDTIVPDIQLYKRFKPFVEDVLPSLIAPLRPAFVAHPYAETAMP 180
FLQQ+D+Y+TLGLEQAGDTIVP+IQ+YKRFKPFVEDVLP+LI+ PA+VAHPYA+ +MP
Sbjct 121 FLQQIDNYVTLGLEQAGDTIVPEIQMYKRFKPFVEDVLPTLISETSPAYVAHPYADESMP 180
Query 181 HAIEHPCSIIIGPEGGFIPYEVDLLIKNGCQAYHLGSRILRTETAVSYLLGRLF 234
+ I H CS+++GPEGGFIPYEVDLL KNGCQA LG+RILRTET++SY+LGRLF
Sbjct 181 NGIGHTCSVVVGPEGGFIPYEVDLLTKNGCQAVSLGNRILRTETSISYILGRLF 234
>N9CMZ7 Ribosomal RNA small subunit methyltransferase E [Acinetobacter
towneri DSM 14962 = CIP 107472]
Length=237
Score = 362 bits (929), Expect = 6e-132
Identities = 172/234 (74%), Positives = 199/234 (85%), Gaps = 0/234 (0%)
Query 1 MNIVLLEPKDTAQAEWRIHSARQLSHLHKQLNIQVDDTLKVGIRNGKRYLTRIVAIEEQE 60
MNIVLL+P+ T W I + RQ+ HLH + +QV D+LKVGIR GKRYLT +V + EQ
Sbjct 1 MNIVLLDPRQTTNEVWSISAQRQVQHLHTHVGVQVGDSLKVGIRGGKRYLTEVVDVSEQR 60
Query 61 IRVTPIQQEACPAKLPVTLIVAMPRPKVLRRLIMDSVTLGVERICLTHSYRVDKSYWQTP 120
I+V + +EA P KLPVTLIVA+PRPKVLRRLIMDSVTLGVE+I L HSYRVDKSYWQTP
Sbjct 61 IQVKALYEEAVPKKLPVTLIVALPRPKVLRRLIMDSVTLGVEKIILLHSYRVDKSYWQTP 120
Query 121 FLQQLDDYITLGLEQAGDTIVPDIQLYKRFKPFVEDVLPSLIAPLRPAFVAHPYAETAMP 180
FLQQLD Y+TLGLEQAGDTI P+IQLYKRFKPFVEDVLPSLI+ PA+VAHPY + AMP
Sbjct 121 FLQQLDQYVTLGLEQAGDTIAPEIQLYKRFKPFVEDVLPSLISADCPAYVAHPYTDQAMP 180
Query 181 HAIEHPCSIIIGPEGGFIPYEVDLLIKNGCQAYHLGSRILRTETAVSYLLGRLF 234
HAI+HPCSI+IGPEGGFIPYE+DLL KNGCQA HLG+RI+RTET ++Y+LGRLF
Sbjct 181 HAIQHPCSIVIGPEGGFIPYEIDLLEKNGCQARHLGNRIIRTETVIAYVLGRLF 234
>N8R200 Ribosomal RNA small subunit methyltransferase E [Acinetobacter
seifertii]
Length=235
Score = 362 bits (928), Expect = 8e-132
Identities = 173/234 (74%), Positives = 203/234 (87%), Gaps = 0/234 (0%)
Query 1 MNIVLLEPKDTAQAEWRIHSARQLSHLHKQLNIQVDDTLKVGIRNGKRYLTRIVAIEEQE 60
MNIVLL P+DT W IHS RQL HL + L+I V LKVGIRNG RY+T IV+I+EQE
Sbjct 1 MNIVLLGPEDTQSEIWSIHSKRQLQHLREHLDITVGQNLKVGIRNGARYVTEIVSIDEQE 60
Query 61 IRVTPIQQEACPAKLPVTLIVAMPRPKVLRRLIMDSVTLGVERICLTHSYRVDKSYWQTP 120
+ + PI++EA PAKLPV LIVA+PRPKVLRRLIMDSVTLGVE+I L HSYRVDKSYWQTP
Sbjct 61 VCIRPIREEAVPAKLPVHLIVALPRPKVLRRLIMDSVTLGVEKISLIHSYRVDKSYWQTP 120
Query 121 FLQQLDDYITLGLEQAGDTIVPDIQLYKRFKPFVEDVLPSLIAPLRPAFVAHPYAETAMP 180
FLQQ+D+Y+TLGLEQAGDTIVP+IQ+YKRFKPFVEDVLP+LI+ PA+VAHPYA+ +MP
Sbjct 121 FLQQIDNYVTLGLEQAGDTIVPEIQMYKRFKPFVEDVLPTLISETSPAYVAHPYADESMP 180
Query 181 HAIEHPCSIIIGPEGGFIPYEVDLLIKNGCQAYHLGSRILRTETAVSYLLGRLF 234
+ I+H CSI++GPEGGFIPYEVDLL KNGCQA LG+RILRTET++SY+LGRLF
Sbjct 181 NGIDHACSIVVGPEGGFIPYEVDLLTKNGCQAVSLGNRILRTETSISYILGRLF 234
>A0A1V2UZH5 Ribosomal RNA small subunit methyltransferase E [Acinetobacter
genomosp. 33YU]
Length=235
Score = 362 bits (928), Expect = 8e-132
Identities = 175/234 (75%), Positives = 201/234 (86%), Gaps = 0/234 (0%)
Query 1 MNIVLLEPKDTAQAEWRIHSARQLSHLHKQLNIQVDDTLKVGIRNGKRYLTRIVAIEEQE 60
MNIVLLEP+DT W IHS RQL HL + L+I V LKVGIRNG RY+T I++I+EQ+
Sbjct 1 MNIVLLEPEDTQSEIWSIHSKRQLQHLREYLDITVGQNLKVGIRNGARYVTEIISIDEQK 60
Query 61 IRVTPIQQEACPAKLPVTLIVAMPRPKVLRRLIMDSVTLGVERICLTHSYRVDKSYWQTP 120
+ V PI +EA PAKLPV LIVA+PRPKVLRRLIMDSVTLGVERI L HSYRVDKSYWQTP
Sbjct 61 VGVRPILKEAVPAKLPVHLIVALPRPKVLRRLIMDSVTLGVERISLIHSYRVDKSYWQTP 120
Query 121 FLQQLDDYITLGLEQAGDTIVPDIQLYKRFKPFVEDVLPSLIAPLRPAFVAHPYAETAMP 180
FLQQ+D Y+TLGLEQAGDTIVP+IQ+YKRFKPFVEDVLP+LI+ PA+VAHPYAE +MP
Sbjct 121 FLQQIDQYVTLGLEQAGDTIVPEIQMYKRFKPFVEDVLPTLISETSPAYVAHPYAEQSMP 180
Query 181 HAIEHPCSIIIGPEGGFIPYEVDLLIKNGCQAYHLGSRILRTETAVSYLLGRLF 234
I+H CSI++GPEGGFIPYEVDLL KNGCQA LG+RILRTET++SY+LGRLF
Sbjct 181 SNIDHTCSIVVGPEGGFIPYEVDLLTKNGCQAVSLGNRILRTETSISYILGRLF 234
>A0A7H2ZQN3 Ribosomal RNA small subunit methyltransferase E [Acinetobacter
seifertii]
Length=235
Score = 362 bits (928), Expect = 8e-132
Identities = 175/234 (75%), Positives = 201/234 (86%), Gaps = 0/234 (0%)
Query 1 MNIVLLEPKDTAQAEWRIHSARQLSHLHKQLNIQVDDTLKVGIRNGKRYLTRIVAIEEQE 60
MNIVLLEP+DT W IHS RQL HL + L+I V LKVGIRNG RY+T I++I+EQ+
Sbjct 1 MNIVLLEPEDTQSEIWSIHSKRQLQHLREYLDITVGQNLKVGIRNGARYVTEIISIDEQK 60
Query 61 IRVTPIQQEACPAKLPVTLIVAMPRPKVLRRLIMDSVTLGVERICLTHSYRVDKSYWQTP 120
+ V PI +EA PAKLPV LIVA+PRPKVLRRLIMDSVTLGVERI L HSYRVDKSYWQTP
Sbjct 61 VGVRPILKEAVPAKLPVHLIVALPRPKVLRRLIMDSVTLGVERISLIHSYRVDKSYWQTP 120
Query 121 FLQQLDDYITLGLEQAGDTIVPDIQLYKRFKPFVEDVLPSLIAPLRPAFVAHPYAETAMP 180
FLQQ+D Y+TLGLEQAGDTIVP+IQ+YKRFKPFVEDVLP+LI+ PA+VAHPYAE +MP
Sbjct 121 FLQQIDQYVTLGLEQAGDTIVPEIQMYKRFKPFVEDVLPTLISETSPAYVAHPYAEQSMP 180
Query 181 HAIEHPCSIIIGPEGGFIPYEVDLLIKNGCQAYHLGSRILRTETAVSYLLGRLF 234
I+H CSI++GPEGGFIPYEVDLL KNGCQA LG+RILRTET++SY+LGRLF
Sbjct 181 SNIDHTCSIVVGPEGGFIPYEVDLLTKNGCQAVSLGNRILRTETSISYILGRLF 234
>A0A1P8EKJ3 Ribosomal RNA small subunit methyltransferase E [Acinetobacter
soli]
Length=235
Score = 361 bits (926), Expect = 2e-131
Identities = 174/234 (74%), Positives = 195/234 (83%), Gaps = 0/234 (0%)
Query 1 MNIVLLEPKDTAQAEWRIHSARQLSHLHKQLNIQVDDTLKVGIRNGKRYLTRIVAIEEQE 60
MN+VL+ P++ W+IH RQ+ HL +QLN+QV DTLKVGI RYLTR++ I Q
Sbjct 1 MNLVLIPPQENLSGPWQIHEPRQVMHLREQLNLQVGDTLKVGILGQARYLTRVMTITAQS 60
Query 61 IRVTPIQQEACPAKLPVTLIVAMPRPKVLRRLIMDSVTLGVERICLTHSYRVDKSYWQTP 120
I V P+QQEA P KLPVTLIVA+PRPKVLRRLIMDSVTLGVERICL HSYRVDKSYWQTP
Sbjct 61 IEVMPLQQEAYPKKLPVTLIVALPRPKVLRRLIMDSVTLGVERICLIHSYRVDKSYWQTP 120
Query 121 FLQQLDDYITLGLEQAGDTIVPDIQLYKRFKPFVEDVLPSLIAPLRPAFVAHPYAETAMP 180
FLQQLDDY+ LGLEQAGDTI PDIQLYKRFKPFVED+LP +I P RPA+VAHPY+ MP
Sbjct 121 FLQQLDDYVQLGLEQAGDTIAPDIQLYKRFKPFVEDILPGMIQPERPAYVAHPYSAQTMP 180
Query 181 HAIEHPCSIIIGPEGGFIPYEVDLLIKNGCQAYHLGSRILRTETAVSYLLGRLF 234
I H CS+IIGPEGGFIPYEV+L+ KNGCQ Y LGSRILRTETAVSY+LGRLF
Sbjct 181 INISHGCSLIIGPEGGFIPYEVELMQKNGCQTYQLGSRILRTETAVSYVLGRLF 234
>O52786 16S rRNA (uracil(1498)-N(3))-methyltransferase [Acinetobacter
haemolyticus]
Length=158
Score = 224 bits (572), Expect = 8e-79
Identities = 110/158 (70%), Positives = 130/158 (82%), Gaps = 1/158 (1%)
Query 1 MNIVLLEPKDTAQAE-WRIHSARQLSHLHKQLNIQVDDTLKVGIRNGKRYLTRIVAIEEQ 59
MN+VLLEP TA A+ W I + RQL HL + L + V DTLK+G+RN +RYLT ++ + EQ
Sbjct 1 MNMVLLEPHLTASADQWLIDNPRQLKHLQQHLQLSVGDTLKIGVRNEQRYLTEVLYVSEQ 60
Query 60 EIRVTPIQQEACPAKLPVTLIVAMPRPKVLRRLIMDSVTLGVERICLTHSYRVDKSYWQT 119
I V PI+ EA P KLPV LI+A+PRPKVLRR++MD+VTLGVERI L HSYRVDKSYWQT
Sbjct 61 RIIVKPIRVEAIPEKLPVHLILALPRPKVLRRMVMDAVTLGVERISLIHSYRVDKSYWQT 120
Query 120 PFLQQLDDYITLGLEQAGDTIVPDIQLYKRFKPFVEDV 157
PFLQQLDDY+TLGLEQAGD I P+IQLYKRFKPFVED+
Sbjct 121 PFLQQLDDYVTLGLEQAGDPIAPEIQLYKRFKPFVEDI 158
>O50659 16S rRNA (Uracil(1498)-N(3))-methyltransferase [Acinetobacter
baumannii]
Length=47
Score = 60.5 bits (145), Expect = 4e-16
Identities = 29/46 (63%), Positives = 32/46 (70%), Gaps = 0/46 (0%)
Query 1 MNIVLLEPKDTAQAEWRIHSARQLSHLHKQLNIQVDDTLKVGIRNG 46
MNIVLLEP+D W IHS RQL HL + L+I V LKVGIRNG
Sbjct 1 MNIVLLEPEDVQSDTWSIHSKRQLQHLREHLDITVGQNLKVGIRNG 46
>Q9S5A1 Ribosomal RNA small subunit methyltransferase E [Listeria
monocytogenes]
Length=255
Score = 58.9 bits (141), Expect = 6e-14
Identities = 56/225 (25%), Positives = 96/225 (43%), Gaps = 30/225 (13%)
Query 26 HLHKQLNIQVDDTLKVGIRNGKRYLTRIVAIEEQEIRVTPIQQEACPAKLPVTLIVA--M 83
H+ + + ++ D + + + K + I AI E+E+ + ++ +LP+ + +A +
Sbjct 26 HIARVMRMKESDQVFIVFPSKKTCIAAITAINEEEVLLNLVKWLEEDTELPIEITIASGL 85
Query 84 PRPKVLRRLIMDSVTLGVERICLTHSYRVDKSY--WQTPF----LQQLDDYITLGLEQAG 137
P+ L +I S LG + SY+ ++S W +++L EQ+
Sbjct 86 PKGDKLELIIQKSTELGAHKFI---SYKAERSVVKWDDKKVIKKIERLQKIAQEAAEQSH 142
Query 138 DTIVPDIQLYKRFKPFVEDVLPSLIAPLRPAFVAHPYAETAMPHAIEHPCSI-------- 189
TI+P++ FK + + FV Y E+A S+
Sbjct 143 RTIIPEVHYAASFKEL-------MFGHVHYDFVIAAYEESAREGEDSALASLFQTMKPGQ 195
Query 190 ----IIGPEGGFIPYEVDLLIKNGCQAYHLGSRILRTETAVSYLL 230
I GPEGG E+ LL + + LG RILRTETA Y+L
Sbjct 196 SVLCIFGPEGGISEKELLLLEEANAKLAGLGPRILRTETAPLYVL 240
>Q5ZRE6 Ribosomal RNA small subunit methyltransferase E [Legionella
pneumophila subsp. pneumophila (strain Philadelphia 1
/ ATCC 33152 / DSM 7513)]
Length=244
Score = 57.4 bits (137), Expect = 2e-13
Identities = 53/209 (25%), Positives = 96/209 (46%), Gaps = 17/209 (8%)
Query 26 HLHKQLNIQVDDTLKVGIRNGKRYLTRIVAIEEQEI--RVTPIQQEACPAKLPVTLIVAM 83
H+ L ++ + L + + K + I ++++++ R+ + + + L + L A+
Sbjct 29 HVGVVLRMEQGEQLTLFNGDNKEFTASIERVKKKQVFVRIASVLEVNRESPLKIHLAQAI 88
Query 84 PRPKVLRRLIMDSVTLGVERICLTH------SYRVDKSYWQTPFLQQLDDYITLGLEQAG 137
+ + + ++ S LGV C+T ++DK Q L+ I EQ G
Sbjct 89 SKGERMEMVMQKSAELGVA--CITPLITERCQVKIDKEKMAKKMHQWLNIIIG-ACEQCG 145
Query 138 DTIVPDIQLYKRFKPFVEDVLPSLIAPLRPAFVAHPYAETAMPHAIEHP-CSIIIGPEGG 196
+P+++ FV + L L PAF ++T + ++ P ++IIGPEGG
Sbjct 146 RNQIPELRQPVYLDQFVREAKEHLKLILHPAF-----SKTWRDYPVQPPDVALIIGPEGG 200
Query 197 FIPYEVDLLIKNGCQAYHLGSRILRTETA 225
F E+ L +G LG R+LRTETA
Sbjct 201 FSDEEIRLTSGHGFLPLSLGPRVLRTETA 229
Score = 19.2 bits (38), Expect = 0.96
Identities = 7/33 (21%), Positives = 16/33 (48%), Gaps = 0/33 (0%)
Query 1 MNIVLLEPKDTAQAEWRIHSARQLSHLHKQLNI 33
+ + + P T + + +I + +H+ LNI
Sbjct 104 LGVACITPLITERCQVKIDKEKMAKKMHQWLNI 136
>H9A1B0 Ribosomal RNA small subunit methyltransferase E [Shewanella
xiamenensis]
Length=243
Score = 51.2 bits (121), Expect = 3e-11
Identities = 53/206 (26%), Positives = 86/206 (42%), Gaps = 9/206 (4%)
Query 25 SHLHKQLNIQVDDTLKVGIRNGKRYLTRIVAIEEQEIRVTPIQQEACPAKLPVTLIV--A 82
+H+ K L + + + + +G YL IV ++ + V + EA P++ P+ L +
Sbjct 26 AHIGKVLRMGSGEQISLFNGDGNDYLAEIVDAGKKSVTVKVLSCEANPSESPLNLHLGQV 85
Query 83 MPRPKVLRRLIMDSVTLGVERICLTHSYRVDKSYWQTPF---LQQLDDYITLGLEQAGDT 139
+ R + I SV LGV I S R +QQ + EQ+G +
Sbjct 86 ISRGDRMEFTIQKSVELGVNTITPLFSDRCGVKLTGERLEKKIQQWQKIVISACEQSGRS 145
Query 140 IVPDIQLYKRFKPFVEDVLPSLIAPLRPAFVAHPYAETAMPHAIEHPCSIIIGPEGGFIP 199
VP ++ + + + +L L P AH + H ++IGPEGG
Sbjct 146 QVPIVRPAMELQQWCSEPTSALKLNLHPR-AAHGINGLDLSHT---RVRLLIGPEGGLSA 201
Query 200 YEVDLLIKNGCQAYHLGSRILRTETA 225
E+ + LG R+LRTETA
Sbjct 202 EEIAMTETYQFTDVLLGPRVLRTETA 227
Lambda K H a alpha
0.326 0.142 0.431 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 599040
Database: 835fe3c52e2cd5eb6bf8b04658fb2195.TrEMBL.fasta
Posted date: May 13, 2024 12:30 AM
Number of letters in database: 3,769
Number of sequences in database: 17
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
