BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 791a6f569425941ebf0aaa06587485aa.SwissProt.fasta
           6 sequences; 1,617 total letters



Query= ACIAD3442

Length=273
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

A4F7P5 Erythromycin 3''-O-methyltransferase [Saccharopolyspora er...  48.1    2e-10
Q5N2S8 Ribosomal RNA small subunit methyltransferase A [Synechoco...  40.0    1e-07
Q31RH6 Ribosomal RNA small subunit methyltransferase A [Synechoco...  40.0    1e-07
G0FUS0 27-O-demethylrifamycin SV methyltransferase [Amycolatopsis...  39.3    2e-07
O74529 Uncharacterized methyltransferase C70.08c [Schizosaccharom...  36.6    1e-06
A1AV41 Ribosomal RNA small subunit methyltransferase G [Pelobacte...  34.7    5e-06


>A4F7P5 Erythromycin 3''-O-methyltransferase [Saccharopolyspora 
erythraea (strain ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 
13426 / NCIMB 8594 / NRRL 2338)]
Length=306

 Score = 48.1 bits (113),  Expect = 2e-10
 Identities = 45/139 (32%), Positives = 65/139 (47%), Gaps = 11/139 (8%)

Query  29   AWSNLGYWAD-TSDYKTACRQLADGLADAVQLSSTDRLLDLGCGQGASLQHWVEHYQIQS  87
            A+ NLGYW    +  + A ++LA+ LA+A  +S  D +LD+G G GA    W+E  +   
Sbjct  48   AYINLGYWKPGCAGLEEANQELANQLAEAAGISEGDEVLDVGFGLGAQDFFWLETRKPAR  107

Query  88   LCAVELQLDHVKRIQHAFPQLE------KMIQGSFLDLRPDTFKPHFDVVMCIDAAYH-S  140
            +  V+L   HV RI     + E      +  +GS  DL        FD V  +++A H  
Sbjct  108  IVGVDLTPSHV-RIASERAERENVQDRLQFKEGSATDL--PFGAETFDRVTSLESALHYE  164

Query  141  ALTSFLTAVGSVLKSKGRL  159
              T F      VLK  G L
Sbjct  165  PRTDFFKGAFEVLKPGGVL  183


>Q5N2S8 Ribosomal RNA small subunit methyltransferase A [Synechococcus 
sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)]
Length=279

 Score = 40.0 bits (92),  Expect = 1e-07
 Identities = 24/73 (33%), Positives = 40/73 (55%), Gaps = 4/73 (5%)

Query  49   LADGLADAVQLSSTDRLLDLGCGQGASLQHWVEHYQIQSLCAVELQLDHVKRIQHAFPQL  108
            + D +  A +L  +DR+L++G G+GA  Q  +    +  L AVEL  D + ++Q  F Q 
Sbjct  17   ILDRIVAAAELRPSDRVLEIGPGRGALTQRLLA--AVDGLVAVELDRDLIGQLQQRFGQA  74

Query  109  EK--MIQGSFLDL  119
            E   +++G  L L
Sbjct  75   ENFCLLEGDILQL  87


>Q31RH6 Ribosomal RNA small subunit methyltransferase A [Synechococcus 
elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)]
Length=279

 Score = 40.0 bits (92),  Expect = 1e-07
 Identities = 24/73 (33%), Positives = 40/73 (55%), Gaps = 4/73 (5%)

Query  49   LADGLADAVQLSSTDRLLDLGCGQGASLQHWVEHYQIQSLCAVELQLDHVKRIQHAFPQL  108
            + D +  A +L  +DR+L++G G+GA  Q  +    +  L AVEL  D + ++Q  F Q 
Sbjct  17   ILDRIVAAAELRPSDRVLEIGPGRGALTQRLLA--AVDGLVAVELDRDLIGQLQQRFGQA  74

Query  109  EK--MIQGSFLDL  119
            E   +++G  L L
Sbjct  75   ENFCLLEGDILQL  87


>G0FUS0 27-O-demethylrifamycin SV methyltransferase [Amycolatopsis 
mediterranei (strain S699)]
Length=272

 Score = 39.3 bits (90),  Expect = 2e-07
 Identities = 20/41 (49%), Positives = 25/41 (61%), Gaps = 1/41 (2%)

Query  34  GYWADTS-DYKTACRQLADGLADAVQLSSTDRLLDLGCGQG  73
           GYW D S   + A  +L D LA  + L + DRLLD+GCG G
Sbjct  31  GYWDDESATLEEATTRLTDRLAGMLPLRAGDRLLDIGCGNG  71


>O74529 Uncharacterized methyltransferase C70.08c [Schizosaccharomyces 
pombe (strain 972 / ATCC 24843)]
Length=260

 Score = 36.6 bits (83),  Expect = 1e-06
 Identities = 38/139 (27%), Positives = 59/139 (42%), Gaps = 26/139 (19%)

Query  35   YWADTSDYKTACR---QLADGLADAVQLSSTDRLLDLGCGQGASLQHWVEHYQIQSLCAV  91
            YW+   DY+       +L   +   + LSS+D LLDLGCG G      V   Q + +  +
Sbjct  5    YWS-AKDYQRNASFVPKLTKDIVKRINLSSSDELLDLGCGDGVLTNELVS--QCRRVVGI  61

Query  92   ELQLDHVKRIQ------HAFPQLEKMIQGSFLDLRPDTFKPHFDVVMCIDAAYHSALTS-  144
            +   D +K  +      +  P  EK++  S +          FDVV   +AA H  +   
Sbjct  62   DASPDMIKAARELGLNAYVIPG-EKLLDASEIP------SESFDVVFS-NAALHWIMRQP  113

Query  145  -----FLTAVGSVLKSKGR  158
                  +  V  VL++KGR
Sbjct  114  KNRPIVMKGVSRVLRTKGR  132


 Score = 17.7 bits (34),  Expect = 1.5
 Identities = 6/11 (55%), Positives = 9/11 (82%), Gaps = 0/11 (0%)

Query  103  HAFPQLEKMIQ  113
            HAFPQ + +I+
Sbjct  218  HAFPQWKDIIR  228


 Score = 15.8 bits (29),  Expect = 6.3
 Identities = 5/7 (71%), Positives = 5/7 (71%), Gaps = 0/7 (0%)

Query  122  DTFKPHF  128
            DTF  HF
Sbjct  210  DTFAQHF  216


>A1AV41 Ribosomal RNA small subunit methyltransferase G [Pelobacter 
propionicus (strain DSM 2379 / NBRC 103807 / OttBd1)]
Length=221

 Score = 34.7 bits (78),  Expect = 5e-06
 Identities = 18/37 (49%), Positives = 24/37 (65%), Gaps = 0/37 (0%)

Query  37  ADTSDYKTACRQLADGLADAVQLSSTDRLLDLGCGQG  73
           A T D + A + +AD L  A QL ST+R+LD+G G G
Sbjct  47  AITDDGEIAVKHIADSLFLARQLDSTERVLDVGSGAG  83



Lambda      K        H        a         alpha
   0.325    0.137    0.428    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 329220


  Database: 791a6f569425941ebf0aaa06587485aa.SwissProt.fasta
    Posted date:  May 20, 2024  11:33 AM
  Number of letters in database: 1,617
  Number of sequences in database:  6



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40