BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 8ed396395842e6a0427aa9601f2fd93c.SwissProt.fasta
13 sequences; 11,321 total letters
Query= ACIAD3376
Length=418
Score E
Sequences producing significant alignments: (Bits) Value
P13510 Cobalt-zinc-cadmium resistance protein CzcB [Cupriavidus m... 197 1e-60
P94176 Cation efflux system protein CzcB [Alcaligenes sp. (strain... 195 4e-60
Q44585 Nickel-cobalt-cadmium resistance protein NccB [Alcaligenes... 103 2e-27
P37973 Nickel and cobalt resistance protein CnrB [Cupriavidus met... 100 4e-26
Q57500 Uncharacterized protein HI_0894 [Haemophilus influenzae (s... 61.2 3e-13
P43505 Membrane fusion protein MtrC [Neisseria gonorrhoeae] 56.2 1e-11
Q9ZJD1 36 kDa antigen [Helicobacter pylori (strain J99 / ATCC 700... 50.8 5e-10
P94851 36 kDa antigen [Helicobacter pylori (strain ATCC 700392 / ... 47.0 1e-08
P58411 Macrolide export protein MacA [Yersinia pestis] 46.6 1e-08
P52599 Probable multidrug resistance protein EmrK [Escherichia co... 43.1 2e-07
Q7JM44 Transcription factor sma-9 [Caenorhabditis elegans] 37.4 2e-05
Q15149 Plectin [Homo sapiens] 37.4 2e-05
P0DPR6 Colistin resistance protein EmrA [Acinetobacter baumannii ... 35.8 4e-05
>P13510 Cobalt-zinc-cadmium resistance protein CzcB [Cupriavidus
metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507
/ CH34)]
Length=520
Score = 197 bits (500), Expect = 1e-60
Identities = 126/350 (36%), Positives = 180/350 (51%), Gaps = 8/350 (2%)
Query 70 EEQPELIFTAQQLQQFGIVTDRVRLGEIQQQTRHPAKLVVNTDAQAHVGASFMAQVEQVN 129
+E+ ++ TA QL + G+V ++Q + P ++ N D AHV VE V
Sbjct 177 KEEGKIELTADQLAKTGVVVQTAGSAKVQAGVQFPGEIRFNEDKTAHVVPRLAGVVESVP 236
Query 130 VSLGQSVKKGQVLATLFVPELIDQQANLSLAREALNLAAQDYQREKQLMNQGVSARQDYQ 189
++GQ VKKGQVLA + L DQ++ L A++ L+LA Y REK+L Q +SA QDY
Sbjct 237 ANIGQQVKKGQVLAVIASTGLSDQRSELLAAQKRLDLARVTYDREKKLWEQKISAEQDYL 296
Query 190 RAYNAYRQAQIQVQAATQRLLAYGASAGSQ--GRYAVRAPLSGTISSKDIVVGEQVATGK 247
A NA ++AQI VQ A Q+L A GAS S RY +RAP G I K I +GE VA
Sbjct 297 SARNALQEAQISVQNAQQKLTAIGASNSSTALNRYELRAPFDGMIVEKHISLGEAVADNA 356
Query 248 PLFVIDQLDQLWLEFILPNSSTVAMQPGQKIKFVSLQTQHEFEAQIQSLTAQADQDTGRL 307
+F + L +W EF++ ++ G+K S + + + + + + + T
Sbjct 357 NVFTLSDLSSVWAEFVVSAKDVERVRIGEKASINSASSDVKADGTVSYVGSLLGEQTRTA 416
Query 308 QVRGKVLTAAKELRPNLMVNVLLETPNPVPVLRVDKRAIQQREGQSVVFVVSQDKKGLRF 367
+ R + RP L V V + + + V A+Q G+SVVFV Q F
Sbjct 417 KARVTLTNPQMAWRPGLFVTVDVFGADVEVPVAVKTEAVQDVNGESVVFVAVQG----GF 472
Query 368 EPKPVQTGRYSSDGAWVEIVSGLTQQQHYVREGSFVLKSELEKGEAEHGH 417
P+PV+ GR ++G +EIV GL Y SFVLK+EL K AEHGH
Sbjct 473 VPQPVKVGR--TNGKVIEIVEGLKPGARYAAANSFVLKAELGKSSAEHGH 520
Score = 32.3 bits (72), Expect = 5e-04
Identities = 56/258 (22%), Positives = 105/258 (41%), Gaps = 32/258 (12%)
Query 11 VVLVLIISLVVAGILLFSGKKSSAMNGGEAE---HAHAEAQEAKTKESGHEAHQEKATEA 67
+ ++++ V G +L SG+ + GG +E H E + E+ H+ +
Sbjct 11 IAAIVLVGGVATGGVLLSGRSAPEEQGGHSESKGHGDTEHHGKQAAEADHKDDKSHGDGE 70
Query 68 HQEEQPELIFTAQQLQQFGIVTDR----VRLGEIQQQTRHPAKLVVNTDAQAHVGASFMA 123
H E ++ G + R V +G + + +L V+ +A A+ +A
Sbjct 71 HHE--------VKKGPNGGALFSRDGYDVEIGTAESKGEARIRLWVSKSGKA--VANGVA 120
Query 124 QVEQVNVSLGQS-----VKKGQVLAT---LFVPELIDQQANLSLAREALNLAAQDYQREK 175
Q+ + G+S V G L + + P + D AN++L + LA + + E
Sbjct 121 ATGQLVRATGESQALKFVVSGDALESQQPVAEPHVFDVTANVTLPGSSSPLAVRLSKEEG 180
Query 176 QLMNQGVSARQDYQRAYNAYRQAQIQVQAATQRLLAYGASAGSQGRYAVRAP-LSGTISS 234
++ ++A Q + +VQA Q G ++ + A P L+G + S
Sbjct 181 KI---ELTADQLAKTGVVVQTAGSAKVQAGVQ---FPGEIRFNEDKTAHVVPRLAGVVES 234
Query 235 KDIVVGEQVATGKPLFVI 252
+G+QV G+ L VI
Sbjct 235 VPANIGQQVKKGQVLAVI 252
>P94176 Cation efflux system protein CzcB [Alcaligenes sp. (strain
CT14)]
Length=520
Score = 195 bits (496), Expect = 4e-60
Identities = 125/350 (36%), Positives = 181/350 (52%), Gaps = 8/350 (2%)
Query 70 EEQPELIFTAQQLQQFGIVTDRVRLGEIQQQTRHPAKLVVNTDAQAHVGASFMAQVEQVN 129
+E+ ++ TA QL + G+V ++Q + P ++ N D AHV VE V
Sbjct 177 KEEGKIELTADQLAKTGVVVQTAGSAKVQAGVQFPGEIRFNEDKTAHVVPRLAGVVESVP 236
Query 130 VSLGQSVKKGQVLATLFVPELIDQQANLSLAREALNLAAQDYQREKQLMNQGVSARQDYQ 189
++GQ VKKGQVLA + L DQ++ L A++ L+LA Y REK+L Q +SA +DY
Sbjct 237 ANIGQQVKKGQVLAVIASTGLSDQRSELLAAQKRLDLARVTYDREKKLWEQKISADEDYL 296
Query 190 RAYNAYRQAQIQVQAATQRLLAYGASAGSQ--GRYAVRAPLSGTISSKDIVVGEQVATGK 247
A NA ++AQI VQ A Q+L A GAS S RY +RAP +G I K I +GE VA
Sbjct 297 SARNALQEAQISVQNAQQKLTAIGASNSSTALNRYELRAPFAGMIVEKHISLGEAVADNA 356
Query 248 PLFVIDQLDQLWLEFILPNSSTVAMQPGQKIKFVSLQTQHEFEAQIQSLTAQADQDTGRL 307
+F + L +W EF++ ++ G+K S + + + + + + + T
Sbjct 357 NVFTLSDLSSVWAEFVVSAKDVERVRIGEKASINSASSDVKADGTVSYVGSLLGEQTRTA 416
Query 308 QVRGKVLTAAKELRPNLMVNVLLETPNPVPVLRVDKRAIQQREGQSVVFVVSQDKKGLRF 367
+ R + RP L V V + + + V A+Q G+SVVFV Q F
Sbjct 417 KARVTLTNPQMAWRPGLFVTVDVFGADVEVPVAVKTEAVQDVNGESVVFVAVQG----GF 472
Query 368 EPKPVQTGRYSSDGAWVEIVSGLTQQQHYVREGSFVLKSELEKGEAEHGH 417
P+PV+ GR ++G +EIV GL Y SFVLK+EL K AEHGH
Sbjct 473 VPQPVKVGR--TNGKVIEIVEGLKPGARYAAANSFVLKAELGKSSAEHGH 520
Score = 32.3 bits (72), Expect = 5e-04
Identities = 56/258 (22%), Positives = 105/258 (41%), Gaps = 32/258 (12%)
Query 11 VVLVLIISLVVAGILLFSGKKSSAMNGGEAE---HAHAEAQEAKTKESGHEAHQEKATEA 67
+ ++++ V G +L SG+ + GG +E H E + E+ H+ +
Sbjct 11 IAAIVLVGGVATGGVLLSGRSAPEEQGGHSESKGHGDTEHHGKQAAEADHKDDKSHGDGE 70
Query 68 HQEEQPELIFTAQQLQQFGIVTDR----VRLGEIQQQTRHPAKLVVNTDAQAHVGASFMA 123
H E ++ G + R V +G + + +L V+ +A A+ +A
Sbjct 71 HHE--------VKKGPNGGALFSRDGYDVEIGTAESKGEARIRLWVSKSGKA--VANGVA 120
Query 124 QVEQVNVSLGQS-----VKKGQVLAT---LFVPELIDQQANLSLAREALNLAAQDYQREK 175
Q+ + G+S V G L + + P + D AN++L + LA + + E
Sbjct 121 ATGQLVRATGESQALKFVVSGDALESQQPVAEPHVFDVTANVTLPGSSSPLAVRLSKEEG 180
Query 176 QLMNQGVSARQDYQRAYNAYRQAQIQVQAATQRLLAYGASAGSQGRYAVRAP-LSGTISS 234
++ ++A Q + +VQA Q G ++ + A P L+G + S
Sbjct 181 KI---ELTADQLAKTGVVVQTAGSAKVQAGVQ---FPGEIRFNEDKTAHVVPRLAGVVES 234
Query 235 KDIVVGEQVATGKPLFVI 252
+G+QV G+ L VI
Sbjct 235 VPANIGQQVKKGQVLAVI 252
>Q44585 Nickel-cobalt-cadmium resistance protein NccB [Alcaligenes
xylosoxydans xylosoxydans]
Length=397
Score = 103 bits (258), Expect = 2e-27
Identities = 94/354 (27%), Positives = 154/354 (44%), Gaps = 11/354 (3%)
Query 59 AHQEKATEAHQEEQPELIFTAQQLQQFGIVTDRVRLGEIQQQTRHPAKLVVNTDAQAHVG 118
A ++ A A E E+ + L I + V G + PA + ++A +
Sbjct 47 APEKAAASAPAAEPAEVRIPGEYLAAANIAVEPVSAGGVGSVLLAPASVAAVPGSEAVIA 106
Query 119 ASFMAQVEQVNVSLGQSVKKGQVLATLFVPELIDQQANLSLAREALNLAAQDYQREKQLM 178
+ V ++ LG +V+ G VLA + PE A +A+ +LA + Y+RE L
Sbjct 107 SRAAGAVLRIQRKLGDAVRAGDVLALVDSPEAAAMAAERKVAQARADLARKTYERESSLF 166
Query 179 NQGVSARQDYQRAYNAYRQAQIQVQAATQRLLAYGASAGSQGR-YAVRAPLSGTISSKDI 237
QGV+ RQ+ + A A AQ +VQ A +A A S GR AV +P++G I+++ +
Sbjct 167 QQGVTPRQEMESARIALDVAQAEVQRAA--TVAQAAKVSSDGRSVAVVSPIAGRITAQSV 224
Query 238 VVGEQVATGKPLFVIDQLDQLWLEFILPNSSTVAMQPGQKIKFVSLQTQHEFEAQIQSLT 297
+G VA LF + + +E + + T + G V L ++Q++T
Sbjct 225 TLGAYVAPQAELFRVAGSGAVQVEAYVTAADTSRIAAGSDATIV-LANGAPLAGRVQAVT 283
Query 298 AQADQDTGRLQVRGKVLTAAKELRPNLMVNVLLET-PNPVPVLRVDKRAIQQREGQSVVF 356
V + A L V V L T + V + A+Q +G+ VVF
Sbjct 284 PTVSGSARAATVVVTPVDANSGLIVGEGVQVRLHTKAADANAMSVPEDAVQNLDGRDVVF 343
Query 357 VVSQDKKGLRFEPKPVQTGRYSSDGAWVEIVSGLTQQQHYVREGSFVLKSELEK 410
V +Q F PK V G S G +I+SG+ + +F++K+E+ K
Sbjct 344 VRTQQ----GFRPKSVLVG--SRSGGVAQILSGVKPGEQVATRNAFLIKAEMNK 391
>P37973 Nickel and cobalt resistance protein CnrB [Cupriavidus
metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 /
CH34)]
Length=395
Score = 100 bits (248), Expect = 4e-26
Identities = 96/344 (28%), Positives = 159/344 (46%), Gaps = 19/344 (6%)
Query 74 ELIFTAQQLQQFGIVTDRVRLGEIQQQTRHPAKLVVNTDAQAHVGASFMAQVEQVNVSLG 133
E+ A L I + V + + PA + ++A + + V++V LG
Sbjct 60 EVKIPATYLAAANIAVEPVASAAVGTEILAPATVAALPGSEAVIVSRAAGAVQRVQRRLG 119
Query 134 QSVKKGQVLATLFVPELIDQQANLSLAREALNLAAQDYQREKQLMNQGVSARQDYQRAYN 193
VK G VLA + PE A +A+ +LA + Y+RE L QGV+ RQ+ + A
Sbjct 120 DVVKAGDVLALVDSPEAAGMAAERKVAQAKADLARKTYEREASLFQQGVTPRQEMEAAKA 179
Query 194 AYRQAQIQ-VQAATQRLLAYGASAGSQGR-YAVRAPLSGTISSKDIVVGEQVATGKPLFV 251
A AQ + ++AAT +A A S GR AV +P++G I+++ + +G VA LF
Sbjct 180 ALDVAQAEALRAAT---VAQSAHLASDGRSVAVVSPIAGKITAQSVTLGAFVAPQAELFR 236
Query 252 IDQLDQLWLEFILPNSSTVAMQPGQKIKFVSLQTQHEFEAQIQSLTAQADQDTGRLQVRG 311
+ + +E + + T + G + + L A++Q++T TG +V
Sbjct 237 VAGTGAVQVEAAVTAADTSRIVAGSEAT-ILLANGSPLSARVQAVTPTV---TGSARVAT 292
Query 312 KVLTAAK---ELRPNLMVNVLLETP-NPVPVLRVDKRAIQQREGQSVVFVVSQDKKGLRF 367
V+ A+ L V V L T L V + A+Q +G+ V+FV +Q+ F
Sbjct 293 VVVVPAQPTDRLVVGEGVQVRLRTAVADAAALSVPEDAVQNLDGRDVLFVRTQE----GF 348
Query 368 EPKPVQTGRYSSDGAWVEIVSGLTQQQHYVREGSFVLKSELEKG 411
P PV G S G +I+SG+ + +F++K+E+ KG
Sbjct 349 RPMPVLVGTRS--GGSAQILSGVQAGEQVATRNAFLVKAEMNKG 390
>Q57500 Uncharacterized protein HI_0894 [Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=382
Score = 61.2 bits (147), Expect = 3e-13
Identities = 59/210 (28%), Positives = 96/210 (46%), Gaps = 20/210 (10%)
Query 108 VVNTDA--QAHVGASFMAQ----VEQVNVSLGQSVKKGQVLATLFVPELIDQQANLSLAR 161
V+NT + + GA Q V QV V GQ+VKKG+VL L + ++ANL A+
Sbjct 53 VINTTGLVRPNQGAMLSTQNAGAVSQVLVQNGQNVKKGEVLVEL---DSSVERANLQAAQ 109
Query 162 EALNLAAQDYQREKQLMNQGVSARQDYQRAYNAYRQAQIQVQAATQRLLAYGASAGSQGR 221
L+ Q YQR L+N +RQ+ A AY AQ+ A+ + L A + R
Sbjct 110 AQLSALRQTYQRYVGLLNSNAVSRQEMDNAKAAY-DAQV---ASIESLKA------AIER 159
Query 222 YAVRAPLSGTISSKDIVVGEQVATGKPLFVIDQLDQLWLEFILPNSSTVAMQPGQKIKFV 281
+ AP G I VG+ V G + ++ + ++F L + + GQ++
Sbjct 160 RKIVAPFDGKAGIVKINVGQYVNVGTEIVRVEDTSSMKVDFALSQNDLDKLHIGQRVTAT 219
Query 282 S-LQTQHEFEAQIQSLTAQADQDTGRLQVR 310
+ + F A+I ++ + TG + V+
Sbjct 220 TDARLGETFSARITAIEPAINSSTGLVDVQ 249
>P43505 Membrane fusion protein MtrC [Neisseria gonorrhoeae]
Length=412
Score = 56.2 bits (134), Expect = 1e-11
Identities = 72/309 (23%), Positives = 124/309 (40%), Gaps = 34/309 (11%)
Query 112 DAQAHVGASFMAQVEQVNVSLGQSVKKGQVL----ATLFVPELIDQQANLSLAREALNLA 167
D +A VG ++ Q G V+ GQ L ++ + L +A L+ A+ L A
Sbjct 74 DVRAQVGGIIQKRLFQE----GSYVRAGQPLYQIDSSTYEAGLESARAQLATAQATLAKA 129
Query 168 AQDYQREKQLMNQGVSARQDYQRAYNAYRQAQIQVQAATQRLLAYGASAGSQGRYAVRAP 227
D R K L++ ++Q+Y A A R A+ V+AA + + G + R + AP
Sbjct 130 DADLARYKPLVSADAISKQEYDAAVTAKRSAEASVKAAQAAIKSAGINLN---RSRITAP 186
Query 228 LSGTISSKDIVVGEQVATGKP--LFVIDQLDQLWLEFILPNSSTVAMQP----------- 274
+SG I + G + G L I Q + +++ S + ++
Sbjct 187 ISGFIGQSKVSEGTLLNAGDTTVLATIRQTNPMYVNVTQSASEVMKLRRQIAEGKLLAAD 246
Query 275 ---GQKIKFVSLQTQHEFEAQIQSLTAQADQDTGRLQVRGKVLTAAKELRPNLMVNVLLE 331
IKF T + + ++ D+ TG++ +R V L P L V VL++
Sbjct 247 GAIAVGIKFDD-GTVYPEKGRLLFADPTVDESTGQITLRAAVSNDQNILMPGLYVRVLMD 305
Query 332 TPNPVPVLRVDKRAIQQREGQSVVFVVSQDKKGLRFEPKPVQTGRYSSDGAWVEIVSGLT 391
V ++A+ + +V+ V +Q EP+ V + W+ + SGL
Sbjct 306 QVAADNAFIVPQQAVTRGAKDTVMIVNAQG----GMEPREVTVAQQQGTN-WI-VTSGLK 359
Query 392 QQQHYVREG 400
V EG
Sbjct 360 DGDKVVVEG 368
>Q9ZJD1 36 kDa antigen [Helicobacter pylori (strain J99 / ATCC
700824)]
Length=329
Score = 50.8 bits (120), Expect = 5e-10
Identities = 55/252 (22%), Positives = 89/252 (35%), Gaps = 64/252 (25%)
Query 117 VGASFMAQVEQVNVSLGQSVKKGQVLATLFVPELIDQQANLSLAREAL------------ 164
V + ++E+V V G +KKG ++ ++ PEL + A +A
Sbjct 49 VSSKVPGRIEKVFVKKGDRIKKGDLVFSISSPELEAKLAQAEAGHKAAKAVSDEVKRGSR 108
Query 165 ------------------NLAAQDYQREKQLMNQGVSARQDYQRAYNAYRQAQIQVQAAT 206
NLA + Y+R + L + GV++ Q AY AY + AA
Sbjct 109 DETINSARDVWQAAKSQANLAKETYKRVQDLYDNGVASLQKRDEAYAAYESTKYNESAAY 168
Query 207 QRLLAYGASAGSQGRYAVR-----------------------APLSGTISSKDIVVGEQV 243
Q+ A S+ + A + AP+ G +S+ + GE
Sbjct 169 QKYKMALGGASSESKIAAKAKESAALGQVNEVESYLKDVKALAPIDGEVSNVLLSGGELS 228
Query 244 ATGKPLFVIDQLDQLWLEFILPNSSTVAMQPGQKIKFVSLQTQHEFEAQIQSLTAQADQD 303
G P+ ++ L WL+ +P + G+ EFE I +L A
Sbjct 229 PKGFPVVLMIDLKDSWLKISVPEKYLNEFKVGK-----------EFEGYIPALKRSAKFR 277
Query 304 TGRLQVRGKVLT 315
L V G T
Sbjct 278 VKYLSVMGDFAT 289
Score = 19.6 bits (39), Expect = 4.5
Identities = 9/31 (29%), Positives = 18/31 (58%), Gaps = 0/31 (0%)
Query 54 ESGHEAHQEKATEAHQEEQPELIFTAQQLQQ 84
E+GH+A + + E + + E I +A+ + Q
Sbjct 90 EAGHKAAKAVSDEVKRGSRDETINSARDVWQ 120
>P94851 36 kDa antigen [Helicobacter pylori (strain ATCC 700392
/ 26695)]
Length=329
Score = 47.0 bits (110), Expect = 1e-08
Identities = 53/252 (21%), Positives = 87/252 (35%), Gaps = 64/252 (25%)
Query 117 VGASFMAQVEQVNVSLGQSVKKGQVLATLFVPELIDQQANLSLAREALN----------- 165
V + ++E+V V G +KKG ++ ++ PEL + A +A
Sbjct 49 VSSKVPGRIEKVFVKKGDHIKKGDLVFSISSPELEAKLAQAEAGHKAAKALSDEVKRGSR 108
Query 166 -------------------LAAQDYQREKQLMNQGVSARQDYQRAYNAYRQAQIQVQAAT 206
LA + Y+R + L + GV++ Q AY AY + AA
Sbjct 109 DETINSARDVWQAAKSQATLAKETYKRVQDLYDNGVASLQKRDEAYAAYESTKYNESAAY 168
Query 207 QRLLAYGASAGSQGRYAVR-----------------------APLSGTISSKDIVVGEQV 243
Q+ A S+ + A + AP+ G +S+ + GE
Sbjct 169 QKYKMALGGASSESKIAAKAKESAALGQVNEVESYLKDVKATAPIDGEVSNVLLSGGELS 228
Query 244 ATGKPLFVIDQLDQLWLEFILPNSSTVAMQPGQKIKFVSLQTQHEFEAQIQSLTAQADQD 303
G P+ ++ L WL+ +P + G+ EFE I +L
Sbjct 229 PKGFPVVLMIDLKDSWLKISVPEKYLNEFKVGK-----------EFEGYIPALKKSTKFR 277
Query 304 TGRLQVRGKVLT 315
L V G T
Sbjct 278 VKYLSVMGDFAT 289
Score = 19.6 bits (39), Expect = 4.5
Identities = 9/31 (29%), Positives = 18/31 (58%), Gaps = 0/31 (0%)
Query 54 ESGHEAHQEKATEAHQEEQPELIFTAQQLQQ 84
E+GH+A + + E + + E I +A+ + Q
Sbjct 90 EAGHKAAKALSDEVKRGSRDETINSARDVWQ 120
>P58411 Macrolide export protein MacA [Yersinia pestis]
Length=371
Score = 46.6 bits (109), Expect = 1e-08
Identities = 57/268 (21%), Positives = 106/268 (40%), Gaps = 36/268 (13%)
Query 96 EIQQQTRHPAKLVVNTDAQAHVGASFMAQVEQVNVSLGQSVKKGQVLATLFVPE------ 149
++QQ KL + + VGA Q+E++ V +G VK+GQ+LA + +
Sbjct 46 DLQQNVLATGKL--DAVRKVDVGAQVSGQLEKLYVEIGDHVKRGQLLAMIDPQQAQNQIK 103
Query 150 -----LIDQQANLSLAREALNLAAQDYQREKQLMNQGVSARQDYQRAYN--AYRQAQI-Q 201
L D A A+ L+LA R++ L V +RQD +A A + A++
Sbjct 104 EVEATLQDLNAQRIQAKAELHLATVTLGRQQNLAKLQVVSRQDLDQAVTDLAVKNAKVGT 163
Query 202 VQAATQRLLAYGASAGSQGRYA-VRAPLSGTISSKDIVVGEQVATGKP---LFVIDQLDQ 257
+ A + A +A Y + AP+ G + + G+ V + + + +
Sbjct 164 IDAQINKAKASLDTAKINLDYTQISAPMDGDVVQITTLQGQTVIAAQQAPNILTLADMST 223
Query 258 LWLEFILPNSSTVAMQPGQKIKFVSLQTQHEFEAQIQSLTAQADQDTGRLQVRGKVLTAA 317
+ ++ + + + ++PG K F T D V +L
Sbjct 224 MLVQAQVSEADVINLKPGMKASF----------------TVLGDPGKRFSGVLKDILPTP 267
Query 318 KELRPNLMVNVLLETPNPVPVLRVDKRA 345
+++ + + E PNP +LR+ A
Sbjct 268 EKVNDAIFYSARFEVPNPDRLLRLQMTA 295
>P52599 Probable multidrug resistance protein EmrK [Escherichia
coli (strain K12)]
Length=387
Score = 43.1 bits (100), Expect = 2e-07
Identities = 38/185 (21%), Positives = 78/185 (42%), Gaps = 24/185 (13%)
Query 105 AKLVVNTDAQAHVGASFMAQVEQVNVSLGQSVKKGQVLATLFVPELIDQQA------NLS 158
A +V T+ + A+V + QS++ L +I ++ L
Sbjct 102 ANIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTLI 161
Query 159 LAREALNLAAQDYQREKQL-MNQGVSARQDYQRAYNAYRQAQIQVQAATQRLLAYGASAG 217
++ ALN A Q Y+ K L MN ++ + A +A ++A + ++
Sbjct 162 SSKAALNAAIQAYKANKALVMNTPLNRQPQVVEAADATKEAWLALK-------------- 207
Query 218 SQGRYAVRAPLSGTISSKDIVVGEQVATGKPLFVIDQLDQLWLEFILPNSSTVAMQPGQK 277
R +++P++G I+ + + VGE V+ G+ L + Q+W+ + ++ GQ
Sbjct 208 ---RTDIKSPVTGYIAQRSVQVGETVSPGQSLMAVVPARQMWVNANFKETQLTDVRIGQS 264
Query 278 IKFVS 282
+ +S
Sbjct 265 VNIIS 269
>Q7JM44 Transcription factor sma-9 [Caenorhabditis elegans]
Length=2242
Score = 37.4 bits (85), Expect = 2e-05
Identities = 48/208 (23%), Positives = 85/208 (41%), Gaps = 30/208 (14%)
Query 31 KSSAMNGGEAEHAHAEAQEAKTKESGHEAH----------QEKATEAHQEEQPELIFTAQ 80
+ A +A+ A Q+A+ + H Q++A QE+Q +L Q
Sbjct 124 QQQAQQAQQAQQAQQARQQAEQQAQAQARHQAEQQAQQQAQQQAQARQQEQQAQLAAIQQ 183
Query 81 QL--QQFG--------IVTDRVRLGEIQQQTRHPAKLVVNTDAQAHVGASFMAQVEQVNV 130
Q+ QQF + + + ++QQQ +L Q + + QV Q++
Sbjct 184 QVTPQQFAQILHMQQQLQQQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQ 243
Query 131 SLGQSVKKGQVLATLFVPELIDQ-QANLS-----LAREALNLAAQDYQREKQL----MNQ 180
+ Q+ + V + P Q QA L ++A L+ Q Q+++QL + Q
Sbjct 244 AQQQAQQAQHVQSRQMQPSQQSQVQAQLQQQQQLQQQQAQQLSQQQAQQQQQLQQLQLQQ 303
Query 181 GVSARQDYQRAYNAYRQAQIQVQAATQR 208
+ +Q + A +QAQ Q A+ QR
Sbjct 304 FLQQQQQLHQQRAAAQQAQAQNNASQQR 331
Score = 36.6 bits (83), Expect = 3e-05
Identities = 57/277 (21%), Positives = 106/277 (38%), Gaps = 26/277 (9%)
Query 93 RLGEIQQQTRHPAKLVVNTDAQA------HVGASFMAQVEQVNVSLGQSVKK----GQVL 142
RL + Q QT P + A HV +Q +Q V+ Q+ + Q+L
Sbjct 24 RLLQAQLQTNGPGSVSQQQQASQQQQQVQHVQQQQQSQQQQQQVASQQNQPQLQMNAQIL 83
Query 143 ATLFVPELIDQQANLSLAREALNLAAQDYQREKQLM-----NQGVSARQDYQRAYNAYRQ 197
L P+ N+ L ++ALN D Q +Q+M Q Q Q+A A +Q
Sbjct 84 QALSTPQG-QNLVNMLLMQQALNAQQTDTQNPQQIMQHQLAQQQAQQAQQAQQAQQARQQ 142
Query 198 AQIQVQAATQRLLAYGASAGSQGRYAVRAPLSGTISSKDIVVGEQVATGKPLFVIDQLDQ 257
A+ Q QA + A +Q + R ++ + +QV + ++ Q
Sbjct 143 AEQQAQAQARHQAEQQAQQQAQQQAQARQQEQ---QAQLAAIQQQVTPQQFAQILHMQQQ 199
Query 258 LWLEFILPNSSTVAMQPGQKIKFVSLQTQHEFEAQIQSL--TAQADQDTGRLQVRGKVLT 315
L + Q+++ LQ Q + Q+Q + +QA Q + Q
Sbjct 200 LQQQQFQQQQLQQQQLQQQQLQQQQLQQQQLQQQQLQQVLQISQAQQQAQQAQ-----HV 254
Query 316 AAKELRPNLMVNVLLETPNPVPVLRVDKRAIQQREGQ 352
+++++P+ V + + + + + Q++ Q
Sbjct 255 QSRQMQPSQQSQVQAQLQQQQQLQQQQAQQLSQQQAQ 291
Score = 33.1 bits (74), Expect = 4e-04
Identities = 69/309 (22%), Positives = 118/309 (38%), Gaps = 33/309 (11%)
Query 57 HEAHQEKATEAHQEEQPELIFTAQQLQQFGIVTDRVRLGEIQQQTRHPAKLVVNTDAQAH 116
H+ Q++A +A Q +Q + QQ +Q + Q Q RH A+ AQ
Sbjct 120 HQLAQQQAQQAQQAQQAQQ--ARQQAEQ-----------QAQAQARHQAEQQAQQQAQQQ 166
Query 117 VGASFMAQVEQVNVSLGQSVKKGQVLATLFVPELIDQQANLSLAREALNLAAQDYQREKQ 176
A Q Q+ ++ Q V Q L + + + QQ + L Q Q++ Q
Sbjct 167 AQARQQEQQAQL-AAIQQQVTPQQFAQILHMQQQLQQQQFQQQQLQQQQLQQQQLQQQ-Q 224
Query 177 LMNQGVSARQDYQ--RAYNAYRQAQIQVQAATQRLLAYGASAGSQGRYAVRAPLSGTISS 234
L Q + +Q Q + A +QAQ Q Q R + + Q + + L +
Sbjct 225 LQQQQLQQQQLQQVLQISQAQQQAQ-QAQHVQSRQMQPSQQSQVQAQLQQQQQLQQQQAQ 283
Query 235 KDIVVGEQVATGKPLFVIDQLDQLWLEFILPNSSTVAMQPGQKIKFVSLQTQHEFEAQIQ 294
+ + +Q A + QL QL L+ L + Q + Q Q+ Q
Sbjct 284 Q---LSQQQAQQQ-----QQLQQLQLQQFLQQQQQLHQQ---RAAAQQAQAQNNASQQRP 332
Query 295 SLTAQADQDTGRLQVRGKVLTAAKELRPNLMVN---VLLETPNPVPVLRVDKRAIQQREG 351
S+ A + Q+ T +L+ L++ + ++ ++A QQ++G
Sbjct 333 SV-ASTPALSSTPQLNDLTQTMQAQLQQQLLLQQQQAQAQQAQQAQQAQLAQQAQQQQQG 391
Query 352 QSVVFVVSQ 360
QS VSQ
Sbjct 392 QSQNRTVSQ 400
Score = 26.6 bits (57), Expect = 0.037
Identities = 37/177 (21%), Positives = 68/177 (38%), Gaps = 20/177 (11%)
Query 31 KSSAMNGGEAEHAHAEAQEAKTKESGHEAHQEKATEAHQEEQPELIFTAQQLQQFGIVTD 90
+S M + A+ Q+ + + +A Q +A Q++Q + + QLQQF
Sbjct 255 QSRQMQPSQQSQVQAQLQQQQQLQQ-QQAQQLSQQQAQQQQQLQQL----QLQQF----- 304
Query 91 RVRLGEIQQQTRHPAKLVVNTDAQAHVGASFMAQVEQVNVSLGQSVKKGQVLATL---FV 147
+QQQ + + AQA AS +L + + + T+
Sbjct 305 ------LQQQQQLHQQRAAAQQAQAQNNASQQRPSVASTPALSSTPQLNDLTQTMQAQLQ 358
Query 148 PELIDQQANLSLAREALNLAAQDYQREKQLMNQGVSARQDYQRAYNAYRQAQIQVQA 204
+L+ QQ A++A ++ Q QG S + +A + Q+Q +A
Sbjct 359 QQLLLQQQQAQ-AQQAQQAQQAQLAQQAQQQQQGQSQNRTVSQALQYIQSMQLQQRA 414
>Q15149 Plectin [Homo sapiens]
Length=4684
Score = 37.4 bits (85), Expect = 2e-05
Identities = 42/179 (23%), Positives = 73/179 (41%), Gaps = 9/179 (5%)
Query 39 EAEHAHAEAQEAKTKESGHEAHQEKATEAHQEEQPELIFTAQQLQQFGIVTDRVRLGEIQ 98
E + AEA EA + S E + + EE +L + + I+ D+
Sbjct 2345 ELQRLKAEATEAARQRSQVE-EELFSVRVQMEELSKLKARIEAENRALILRDKDNTQRFL 2403
Query 99 QQTRHPAKLVVNTDAQAHVGASFMAQVEQV-------NVSLGQSVKKGQVLATLFVPELI 151
Q+ K V A+ V A A++ Q+ +L + + K ++ A L
Sbjct 2404 QEEAEKMKQVAEEAARLSVAAQEAARLRQLAEEDLAQQRALAEKMLKEKMQAVQEATRLK 2463
Query 152 DQQANLSLAREALNLAAQDYQREKQLMNQGVSAR-QDYQRAYNAYRQAQIQVQAATQRL 209
+ L +E A+ Q +K+ M Q ++ Q +QR A RQ Q+++ A +RL
Sbjct 2464 AEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQGFQRTLEAERQRQLEMSAEAERL 2522
Score = 32.0 bits (71), Expect = 8e-04
Identities = 40/173 (23%), Positives = 74/173 (43%), Gaps = 19/173 (11%)
Query 38 GEAEHAHAEAQEAKTKESGHEAHQEKATEAHQEEQPELIFTAQQLQQFGIVTDRVRLGEI 97
GEAE A A+EA +E+ +A +E A Q E+ A++L+Q E
Sbjct 2218 GEAEAARRAAEEA--EEARVQAEREAAQSRRQVEE------AERLKQ---------SAEE 2260
Query 98 QQQTRHPAKLVV-NTDAQAHVGASFMAQVEQVNVSLGQSVKKGQVLATLFVPELIDQQAN 156
Q Q R A+ +A A+ AQ EQ + Q+ F + + Q+A
Sbjct 2261 QAQARAQAQAAAEKLRKEAEQEAARRAQAEQAALRQKQAADAEMEKHKKFAEQTLRQKAQ 2320
Query 157 LSLAREALNLAAQDYQREKQLMNQGVSARQDYQRAYNAYRQAQIQVQAATQRL 209
+ L L ++ +K L+++ + R + A +++Q++ + + R+
Sbjct 2321 VEQELTTLRLQLEETDHQKNLLDEELQ-RLKAEATEAARQRSQVEEELFSVRV 2372
Score = 28.1 bits (61), Expect = 0.013
Identities = 38/190 (20%), Positives = 75/190 (39%), Gaps = 10/190 (5%)
Query 39 EAEHAHAEAQEAKTKESGHEAHQEKATEAHQEEQPELIFTAQQLQQFGIVTDRVRLGEIQ 98
E E EA+E K E + +A EE L ++ ++ ++ ++Q
Sbjct 2115 EEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERAEQESARQLQ 2174
Query 99 QQTRHPAKLVVNTDAQAHVGASFMAQVEQVNVSLGQSVKKGQVLATLFVPELIDQQANLS 158
+ A+ + + +AH A V+Q L Q++++ Q + + +L +
Sbjct 2175 L-AQEAAQKRLQAEEKAHAFA-----VQQKEQELQQTLQQEQSV----LDQLRGEAEAAR 2224
Query 159 LAREALNLAAQDYQREKQLMNQGVSARQDYQRAYNAYRQAQIQVQAATQRLLAYGASAGS 218
A E A +RE + V + +++ QA+ Q QAA ++L +
Sbjct 2225 RAAEEAEEARVQAEREAAQSRRQVEEAERLKQSAEEQAQARAQAQAAAEKLRKEAEQEAA 2284
Query 219 QGRYAVRAPL 228
+ A +A L
Sbjct 2285 RRAQAEQAAL 2294
Score = 26.2 bits (56), Expect = 0.050
Identities = 38/184 (21%), Positives = 74/184 (40%), Gaps = 17/184 (9%)
Query 32 SSAMNGGEAEHAHAEAQEAKTKESGHEAH-----QEKATEAHQEEQPELIFTAQQLQ--- 83
S + E E AE Q A+ +E E Q + EAH + + + A++LQ
Sbjct 1475 SETLRRMEEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRM 1534
Query 84 QFGIVTDRVRLGEIQQQTR----HPAKLVVNTDAQAHVGASFMAQVEQVNVSLGQSVKKG 139
Q +V + QQQ R +L +++A+ A E+ + + + ++
Sbjct 1535 QEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIR-- 1592
Query 140 QVLATLFVPELIDQQANLSLAREALNLAAQDYQREK-QLMNQGVSARQDYQRAYNAYRQA 198
+ L + Q+ +AL A++ + +K Q + R+ Q RQA
Sbjct 1593 --VVRLQLEATERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQA 1650
Query 199 QIQV 202
++++
Sbjct 1651 EVEL 1654
Score = 25.0 bits (53), Expect = 0.11
Identities = 39/199 (20%), Positives = 78/199 (39%), Gaps = 25/199 (13%)
Query 34 AMNGGEAEHAHAEAQEAKTK-------------ESGHEAHQEKATEAHQEEQPELIFTAQ 80
A EAE A EA+ + ++ A Q+ +A E+Q E +
Sbjct 1751 AQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLAQAEAEKQKE--EAER 1808
Query 81 QLQQFGIVTDR-VRLGEIQQQTRHPAKLVVNTDAQAHVGASFMAQVEQVNVSLGQSVKKG 139
+ ++ G ++ VR E+ +Q + + AQ + A EQ + L ++G
Sbjct 1809 EARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQRLAA------EQELIRLRAETEQG 1862
Query 140 QVLATLFVPELIDQQANLSLA---REALNLAAQDYQREKQLMNQGVSARQDYQRAYNAYR 196
+ L EL Q + A R+ L + E +++ + ++ R+ +
Sbjct 1863 EQQRQLLEEELARLQREAAAATQKRQELEAELAKVRAEMEVLLASKARAEEESRSTSEKS 1922
Query 197 QAQIQVQAATQRLLAYGAS 215
+ +++ +A R LA A+
Sbjct 1923 KQRLEAEAGRFRELAEEAA 1941
Score = 24.6 bits (52), Expect = 0.15
Identities = 43/197 (22%), Positives = 80/197 (41%), Gaps = 27/197 (14%)
Query 34 AMNGGEAEHAH----AEAQEAKTKESGHEAHQEKATEAHQEEQPELIFTAQQLQQFGIVT 89
A+ EAE+ AE + + + +A Q KA + Q ++ +Q G+V
Sbjct 1992 ALKEKEAENERLRRLAEDEAFQRRRLEEQAAQHKADIEERLAQLRKASDSELERQKGLVE 2051
Query 90 DRVRLGEIQQQTRHPAKLVVNTDAQAHVGASFMAQVEQVNVSLGQSVKKGQVLATLFVPE 149
D +R Q R + ++ A A+ A++E ++ G++ +
Sbjct 2052 DTLR------QRRQVEEEILALKASFEKAAAGKAELE---------LELGRIRSNAEDTL 2096
Query 150 LIDQQANLSLAREALNLAAQDYQREKQLMNQGVSARQDYQRAYNAYRQAQIQVQAATQRL 209
+QA L AR+ LAA++ +R ++ A + Q++ A +A Q +AA + +
Sbjct 2097 RSKEQAELEAARQR-QLAAEEERRRRE-------AEERVQKSLAAEEEAARQRKAALEEV 2148
Query 210 LAYGASAGSQGRYAVRA 226
A R RA
Sbjct 2149 ERLKAKVEEARRLRERA 2165
Score = 23.1 bits (48), Expect = 0.44
Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 0/50 (0%)
Query 159 LAREALNLAAQDYQREKQLMNQGVSARQDYQRAYNAYRQAQIQVQAATQR 208
+A + YQ+ Q + QG QR + + ++Q++A R
Sbjct 1090 MAEREYGSCSHHYQQLLQSLEQGAQEESRCQRCISELKDIRLQLEACETR 1139
Score = 22.7 bits (47), Expect = 0.58
Identities = 15/49 (31%), Positives = 23/49 (47%), Gaps = 0/49 (0%)
Query 198 AQIQVQAATQRLLAYGASAGSQGRYAVRAPLSGTISSKDIVVGEQVATG 246
A ++ QA T ++ SA AVRA L G + ++ E+ TG
Sbjct 3193 ALLEAQAGTGHIIDPATSARLTVDEAVRAGLVGPEFHEKLLSAEKAVTG 3241
Score = 21.9 bits (45), Expect = 1.00
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query 45 AEAQEAKTKESGHEAHQEKATEAHQEEQPELI---FTAQQLQQFGIVT 89
++ KT +G +A A EA E + + +AQ+LQ+ GI++
Sbjct 2755 SQVAATKTLPNGRDALDGPAAEAEPEHSFDGLRRKVSAQRLQEAGILS 2802
Score = 20.8 bits (42), Expect = 2.3
Identities = 33/149 (22%), Positives = 59/149 (40%), Gaps = 15/149 (10%)
Query 271 AMQPGQKIKFVSLQTQHEFEAQIQSLTAQAD-QDTGRLQVRGKVLTAAKELRPNLMVNVL 329
A Q + I+ Q + EA+IQ+ QA+ + RL++ ++ +L
Sbjct 1548 AQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLEATERQRGG 1607
Query 330 LETPNPVPVLRVDKRAIQQREGQSVVFVVSQDKKGLRFEPKPVQTGRYSSDGAWVEIVSG 389
E R ++ Q+R+ Q ++ + LR + VQ A VE+ S
Sbjct 1608 AEGELQALRARAEEAEAQKRQAQ-------EEAERLR---RQVQDESQRKRQAEVELASR 1657
Query 390 LTQQQHYVREGSFVLKS----ELEKGEAE 414
+ + RE L++ L+ EAE
Sbjct 1658 VKAEAEAAREKQRALQALEELRLQAEEAE 1686
Score = 20.4 bits (41), Expect = 3.0
Identities = 12/45 (27%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query 97 IQQQTRHPAKLVVNTDAQAHVGASFMAQVEQVNVSLGQSVKKGQV 141
+Q+Q P ++ +AQA G + V +++ ++VK+G V
Sbjct 2853 LQRQLLSPGTALILLEAQAASG-FLLDPVRNRRLTVNEAVKEGVV 2896
Score = 19.2 bits (38), Expect = 6.7
Identities = 17/82 (21%), Positives = 31/82 (38%), Gaps = 1/82 (1%)
Query 126 EQVNVSLGQSVKKGQVLATLFVPELIDQQANLSLAREALNLAAQDYQREKQLMNQGVSAR 185
E+ L + G+V + +I+ + R+ LA+ DY R + AR
Sbjct 3735 EEQRAQLMADFQAGRVTKERMIIIIIEIIEKTEIIRQQ-GLASYDYVRRRLTAEDLFEAR 3793
Query 186 QDYQRAYNAYRQAQIQVQAATQ 207
YN R+ ++ A +
Sbjct 3794 IISLETYNLLREGTRSLREALE 3815
Score = 18.9 bits (37), Expect = 8.8
Identities = 13/47 (28%), Positives = 20/47 (43%), Gaps = 1/47 (2%)
Query 331 ETPNPVPVLRVDKRAIQQREGQSVVFVVSQDKKGLRFEPKPVQTGRY 377
E + +PV KR + E ++ S D KG F+P + Y
Sbjct 4193 EESHRLPVEVAYKRGLFDEEMNEILTDPSDDTKGF-FDPNTEENLTY 4238
>P0DPR6 Colistin resistance protein EmrA [Acinetobacter baumannii
(strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 /
5377)]
Length=353
Score = 35.8 bits (81), Expect = 4e-05
Identities = 64/295 (22%), Positives = 109/295 (37%), Gaps = 61/295 (21%)
Query 10 WVVLVLIISLVVAGILLFSGKKSSAMNGGEAEHAHAEAQEAKTKESGHEAHQEKATEAHQ 69
W V +++ +VAGIL + + A + A+ K SG
Sbjct 21 WGVFSVLLLFLVAGILYYFFVYRFYQSTDNA-YVQADVTWVMPKISG------------- 66
Query 70 EEQPELIFTAQQLQQFGIVTDRVRLGEIQQQTRHPAKLVVNTDAQAHVGASFMAQVEQVN 129
E EL+ Q+ + G L Q R+ V + +A +G V+Q N
Sbjct 67 -EVMELLINDNQVVKKG--ETLAVLDHRDYQARYDQARSVVSLKEAALG------VQQQN 117
Query 130 VSLGQSVKKGQVLATLFVPELIDQQANLSLAREALNLAAQDYQREKQLMNQGVSARQDYQ 189
+S +I+ + + A+ L ++++R + L+ GV RQ+++
Sbjct 118 EKSARS-------------SIIEANSGVVAAQADLARLKKEFERYQDLLKDGVITRQNFE 164
Query 190 RAYNAYRQAQIQVQAATQRLLAYGASAGS------------QGRYA-------------V 224
+ Y AQ Q+ A + A A GS Q +A V
Sbjct 165 GIQSQYLTAQAQLSKAQAAVNAAEAQLGSLQASRAQLLADIQSSHANLNLYQVDLASSKV 224
Query 225 RAPLSGTISSKDIVVGEQVATGKPLFVIDQLDQLWLEFILPNSSTVAMQPGQKIK 279
+P+SG I S I G +V+ L I + L+++ + M GQK+K
Sbjct 225 VSPVSGKIGSLAIQKGSRVSPQTRLMAIIPENSLYVQANFKETQIEKMHIGQKVK 279
Lambda K H a alpha
0.316 0.130 0.358 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3849978
Database: 8ed396395842e6a0427aa9601f2fd93c.SwissProt.fasta
Posted date: May 13, 2024 2:46 PM
Number of letters in database: 11,321
Number of sequences in database: 13
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
