BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 1564cfa5515d331ff2abad96e476946c.TrEMBL.fasta
21 sequences; 4,828 total letters
Query= ACIAD3357
Length=246
Score E
Sequences producing significant alignments: (Bits) Value
Q9AM61 Putative membrane protein (ComO) [Acinetobacter baylyi (st... 491 0.0
A0A7G2SAI8 Pilus assembly protein, PilO [Acinetobacter sp] 491 0.0
A0A0M1I887 Membrane protein [Acinetobacter sp. C15] 396 4e-145
N9C0N7 Pilus assembly protein, PilO [Acinetobacter soli NIPH 2899] 396 4e-145
A0A1P8EKC6 Type 4a pilus biogenesis protein PilO [Acinetobacter s... 396 6e-145
A0A3A8EYW4 Type 4a pilus biogenesis protein PilO [Acinetobacter g... 369 3e-134
N9DJW9 Type 4 fimbrial biogenesis protein PilO [Acinetobacter urs... 363 3e-132
A0A7T9UJH3 Type 4a pilus biogenesis protein PilO [Acinetobacter u... 363 3e-132
A0A009ZLB8 Pilus assembly, PilO family protein [Acinetobacter sp.... 363 3e-132
A0A3R9CU58 Type 4a pilus biogenesis protein PilO [Acinetobacter s... 363 3e-132
A0A3D2SIJ7 Type IV pilus biogenesis protein PilO [Acinetobacter u... 363 4e-132
R9B7D1 Type IV pilus assembly protein PilO [Acinetobacter sp. CIP... 361 3e-131
N8XT86 Pilus assembly protein, PilO [Acinetobacter sp. CIP 56.2] 360 9e-131
F7IY50 Type IV pilus biogenesis protein [Pseudomonas amygdali pv.... 164 4e-54
Q52541 Membrane protein [Pseudomonas syringae] 164 4e-54
Q51353 PilO protein [Pseudomonas aeruginosa] 155 1e-50
A0A5P2TYY0 Type 4 pilus PilO [Lysobacter enzymogenes] 129 3e-40
B6SE78 PilO [Kingella kingae] 92.8 2e-26
O05128 PilO [Neisseria gonorrhoeae] 89.0 6e-25
Q50970 PilO [Neisseria gonorrhoeae] 88.6 9e-25
Q306N4 PilO [Myxococcus xanthus (strain DK1622)] 82.8 1e-22
>Q9AM61 Putative membrane protein (ComO) [Acinetobacter baylyi
(strain ATCC 33305 / BD413 / ADP1)]
Length=245
Score = 491 bits (1263), Expect = 0.0
Identities = 245/245 (100%), Positives = 245/245 (100%), Gaps = 0/245 (0%)
Query 1 MKLDQLDKTPKESGQPKKKRMNVEKFFQQFNMLDMSNYGSWPLSVKITCWIFIFFLVCAL 60
MKLDQLDKTPKESGQPKKKRMNVEKFFQQFNMLDMSNYGSWPLSVKITCWIFIFFLVCAL
Sbjct 1 MKLDQLDKTPKESGQPKKKRMNVEKFFQQFNMLDMSNYGSWPLSVKITCWIFIFFLVCAL 60
Query 61 GYFVVIRPQLDDIQTAQAQEKNLLNEFREKQSKLRNLQQYQHQLEEMRASFNQQLTQLPK 120
GYFVVIRPQLDDIQTAQAQEKNLLNEFREKQSKLRNLQQYQHQLEEMRASFNQQLTQLPK
Sbjct 61 GYFVVIRPQLDDIQTAQAQEKNLLNEFREKQSKLRNLQQYQHQLEEMRASFNQQLTQLPK 120
Query 121 ESEIPGLVEDINMTGVNSGLKFKNIRLENEVKQEFFIEQPISIEATGDYHAFGAFVSGIA 180
ESEIPGLVEDINMTGVNSGLKFKNIRLENEVKQEFFIEQPISIEATGDYHAFGAFVSGIA
Sbjct 121 ESEIPGLVEDINMTGVNSGLKFKNIRLENEVKQEFFIEQPISIEATGDYHAFGAFVSGIA 180
Query 181 ALPRIVTLHDFVIEAKQSKEKTDIPEVDYAVKAKTYRYIGVDEQGNASAVQANTSTTTPA 240
ALPRIVTLHDFVIEAKQSKEKTDIPEVDYAVKAKTYRYIGVDEQGNASAVQANTSTTTPA
Sbjct 181 ALPRIVTLHDFVIEAKQSKEKTDIPEVDYAVKAKTYRYIGVDEQGNASAVQANTSTTTPA 240
Query 241 QGGTP 245
QGGTP
Sbjct 241 QGGTP 245
>A0A7G2SAI8 Pilus assembly protein, PilO [Acinetobacter sp]
Length=245
Score = 491 bits (1263), Expect = 0.0
Identities = 245/245 (100%), Positives = 245/245 (100%), Gaps = 0/245 (0%)
Query 1 MKLDQLDKTPKESGQPKKKRMNVEKFFQQFNMLDMSNYGSWPLSVKITCWIFIFFLVCAL 60
MKLDQLDKTPKESGQPKKKRMNVEKFFQQFNMLDMSNYGSWPLSVKITCWIFIFFLVCAL
Sbjct 1 MKLDQLDKTPKESGQPKKKRMNVEKFFQQFNMLDMSNYGSWPLSVKITCWIFIFFLVCAL 60
Query 61 GYFVVIRPQLDDIQTAQAQEKNLLNEFREKQSKLRNLQQYQHQLEEMRASFNQQLTQLPK 120
GYFVVIRPQLDDIQTAQAQEKNLLNEFREKQSKLRNLQQYQHQLEEMRASFNQQLTQLPK
Sbjct 61 GYFVVIRPQLDDIQTAQAQEKNLLNEFREKQSKLRNLQQYQHQLEEMRASFNQQLTQLPK 120
Query 121 ESEIPGLVEDINMTGVNSGLKFKNIRLENEVKQEFFIEQPISIEATGDYHAFGAFVSGIA 180
ESEIPGLVEDINMTGVNSGLKFKNIRLENEVKQEFFIEQPISIEATGDYHAFGAFVSGIA
Sbjct 121 ESEIPGLVEDINMTGVNSGLKFKNIRLENEVKQEFFIEQPISIEATGDYHAFGAFVSGIA 180
Query 181 ALPRIVTLHDFVIEAKQSKEKTDIPEVDYAVKAKTYRYIGVDEQGNASAVQANTSTTTPA 240
ALPRIVTLHDFVIEAKQSKEKTDIPEVDYAVKAKTYRYIGVDEQGNASAVQANTSTTTPA
Sbjct 181 ALPRIVTLHDFVIEAKQSKEKTDIPEVDYAVKAKTYRYIGVDEQGNASAVQANTSTTTPA 240
Query 241 QGGTP 245
QGGTP
Sbjct 241 QGGTP 245
>A0A0M1I887 Membrane protein [Acinetobacter sp. C15]
Length=244
Score = 396 bits (1018), Expect = 4e-145
Identities = 199/245 (81%), Positives = 218/245 (89%), Gaps = 1/245 (0%)
Query 1 MKLDQLDKTPKESGQPKKKRMNVEKFFQQFNMLDMSNYGSWPLSVKITCWIFIFFLVCAL 60
MK D +D T E +KKRM V+KFFQQFN LDMSNYGSWP SVKITCWIFIFFLV AL
Sbjct 1 MKRDPVDHTAPEQAPVQKKRMTVDKFFQQFNTLDMSNYGSWPKSVKITCWIFIFFLVVAL 60
Query 61 GYFVVIRPQLDDIQTAQAQEKNLLNEFREKQSKLRNLQQYQHQLEEMRASFNQQLTQLPK 120
GYFV+IRPQLD IQTA+AQE+NLLNEF+EK+SKLRNLQQYQ QL EM+ASFNQQLTQLPK
Sbjct 61 GYFVMIRPQLDTIQTARAQEQNLLNEFKEKESKLRNLQQYQRQLVEMQASFNQQLTQLPK 120
Query 121 ESEIPGLVEDINMTGVNSGLKFKNIRLENEVKQEFFIEQPISIEATGDYHAFGAFVSGIA 180
ESEIPGLVEDINMTGVNSGLKFKNIRLENEVKQE F+EQPISIEATGDYHAFGAFVSGI+
Sbjct 121 ESEIPGLVEDINMTGVNSGLKFKNIRLENEVKQEIFVEQPISIEATGDYHAFGAFVSGIS 180
Query 181 ALPRIVTLHDFVIEAKQSKEKTDIPEVDYAVKAKTYRYIGVDEQGNASAVQANTSTTTPA 240
ALPRIVT+HDFVIEAK +KE +DIP+VDY+VKAKTYRYIGVDEQ AS+VQ + + A
Sbjct 181 ALPRIVTIHDFVIEAKPAKETSDIPQVDYSVKAKTYRYIGVDEQNAASSVQPSAAPAA-A 239
Query 241 QGGTP 245
QGGTP
Sbjct 240 QGGTP 244
>N9C0N7 Pilus assembly protein, PilO [Acinetobacter soli NIPH
2899]
Length=244
Score = 396 bits (1018), Expect = 4e-145
Identities = 199/245 (81%), Positives = 218/245 (89%), Gaps = 1/245 (0%)
Query 1 MKLDQLDKTPKESGQPKKKRMNVEKFFQQFNMLDMSNYGSWPLSVKITCWIFIFFLVCAL 60
MK D +D T E +KKRM V+KFFQQFN LDMSNYGSWP SVKITCWIFIFFLV AL
Sbjct 1 MKRDPVDHTAPEQAPVQKKRMTVDKFFQQFNTLDMSNYGSWPKSVKITCWIFIFFLVVAL 60
Query 61 GYFVVIRPQLDDIQTAQAQEKNLLNEFREKQSKLRNLQQYQHQLEEMRASFNQQLTQLPK 120
GYFV+IRPQLD IQTA+AQE+NLLNEF+EK+SKLRNLQQYQ QL EM+ASFNQQLTQLPK
Sbjct 61 GYFVMIRPQLDTIQTARAQEQNLLNEFKEKESKLRNLQQYQRQLVEMQASFNQQLTQLPK 120
Query 121 ESEIPGLVEDINMTGVNSGLKFKNIRLENEVKQEFFIEQPISIEATGDYHAFGAFVSGIA 180
ESEIPGLVEDINMTGVNSGLKFKNIRLENEVKQE F+EQPISIEATGDYHAFGAFVSGI+
Sbjct 121 ESEIPGLVEDINMTGVNSGLKFKNIRLENEVKQEIFVEQPISIEATGDYHAFGAFVSGIS 180
Query 181 ALPRIVTLHDFVIEAKQSKEKTDIPEVDYAVKAKTYRYIGVDEQGNASAVQANTSTTTPA 240
ALPRIVT+HDFVIEAK +KE +DIP+VDY+VKAKTYRYIGVDEQ AS+VQ + + A
Sbjct 181 ALPRIVTMHDFVIEAKPAKETSDIPQVDYSVKAKTYRYIGVDEQNAASSVQPSAAPAA-A 239
Query 241 QGGTP 245
QGGTP
Sbjct 240 QGGTP 244
>A0A1P8EKC6 Type 4a pilus biogenesis protein PilO [Acinetobacter
soli]
Length=244
Score = 396 bits (1017), Expect = 6e-145
Identities = 199/245 (81%), Positives = 218/245 (89%), Gaps = 1/245 (0%)
Query 1 MKLDQLDKTPKESGQPKKKRMNVEKFFQQFNMLDMSNYGSWPLSVKITCWIFIFFLVCAL 60
MK D +D T E +KKRM V+KFFQQFN LDMSNYGSWP SVKITCWIFIFFLV AL
Sbjct 1 MKRDPVDHTAPEQAPVQKKRMTVDKFFQQFNTLDMSNYGSWPKSVKITCWIFIFFLVVAL 60
Query 61 GYFVVIRPQLDDIQTAQAQEKNLLNEFREKQSKLRNLQQYQHQLEEMRASFNQQLTQLPK 120
GYFV+IRPQLD IQTA+AQE+NLLNEF+EK+SKLRNLQQYQ QL EM+ASFNQQLTQLPK
Sbjct 61 GYFVMIRPQLDAIQTARAQEQNLLNEFKEKESKLRNLQQYQRQLVEMQASFNQQLTQLPK 120
Query 121 ESEIPGLVEDINMTGVNSGLKFKNIRLENEVKQEFFIEQPISIEATGDYHAFGAFVSGIA 180
ESEIPGLVEDINMTGVNSGLKFKNIRLENEVKQE F+EQPISIEATGDYHAFGAFVSGI+
Sbjct 121 ESEIPGLVEDINMTGVNSGLKFKNIRLENEVKQEIFVEQPISIEATGDYHAFGAFVSGIS 180
Query 181 ALPRIVTLHDFVIEAKQSKEKTDIPEVDYAVKAKTYRYIGVDEQGNASAVQANTSTTTPA 240
ALPRIVT+HDFVIEAK +KE +DIP+VDY+VKAKTYRYIGVDEQ AS+VQ + + A
Sbjct 181 ALPRIVTMHDFVIEAKPAKETSDIPQVDYSVKAKTYRYIGVDEQNAASSVQPSAAPAA-A 239
Query 241 QGGTP 245
QGGTP
Sbjct 240 QGGTP 244
>A0A3A8EYW4 Type 4a pilus biogenesis protein PilO [Acinetobacter
guerrae]
Length=237
Score = 369 bits (946), Expect = 3e-134
Identities = 178/229 (78%), Positives = 201/229 (88%), Gaps = 0/229 (0%)
Query 1 MKLDQLDKTPKESGQPKKKRMNVEKFFQQFNMLDMSNYGSWPLSVKITCWIFIFFLVCAL 60
M D+ ++ E PKKK++ ++KFFQQFN LDM+NYGSWPLSVKITCWIFIFF VCAL
Sbjct 1 MSRDEFNELDPEFAAPKKKKLTLDKFFQQFNTLDMNNYGSWPLSVKITCWIFIFFAVCAL 60
Query 61 GYFVVIRPQLDDIQTAQAQEKNLLNEFREKQSKLRNLQQYQHQLEEMRASFNQQLTQLPK 120
GYF+ I+P+LD I TAQAQE+NLLNEFREK SKLRNLQQYQ QL+EM ++FNQQL QLPK
Sbjct 61 GYFLAIKPKLDAISTAQAQEQNLLNEFREKDSKLRNLQQYQVQLQEMESNFNQQLAQLPK 120
Query 121 ESEIPGLVEDINMTGVNSGLKFKNIRLENEVKQEFFIEQPISIEATGDYHAFGAFVSGIA 180
E+EIP LVEDINMTGVNSGLKFKNIRLENEV+QEFFIEQPISI+ATGDYHAFGAFVS IA
Sbjct 121 ETEIPSLVEDINMTGVNSGLKFKNIRLENEVRQEFFIEQPISIDATGDYHAFGAFVSAIA 180
Query 181 ALPRIVTLHDFVIEAKQSKEKTDIPEVDYAVKAKTYRYIGVDEQGNASA 229
ALPRIVTLHDFVIE KQ KEK DIPE+ Y+VKAKTYRYIG DEQ + ++
Sbjct 181 ALPRIVTLHDFVIEGKQVKEKADIPEISYSVKAKTYRYIGADEQASGAS 229
>N9DJW9 Type 4 fimbrial biogenesis protein PilO [Acinetobacter
ursingii ANC 3649]
Length=237
Score = 363 bits (933), Expect = 3e-132
Identities = 175/229 (76%), Positives = 199/229 (87%), Gaps = 0/229 (0%)
Query 1 MKLDQLDKTPKESGQPKKKRMNVEKFFQQFNMLDMSNYGSWPLSVKITCWIFIFFLVCAL 60
M D+ ++ E PKKK++ ++KF QQFN LDM+NYG WPLSVKITCWIFIFF VCAL
Sbjct 1 MSRDEFNELDPEVAAPKKKKLTLDKFLQQFNTLDMNNYGGWPLSVKITCWIFIFFAVCAL 60
Query 61 GYFVVIRPQLDDIQTAQAQEKNLLNEFREKQSKLRNLQQYQHQLEEMRASFNQQLTQLPK 120
GYF+ I+P+LD I TAQAQE+NLLNEFREK SKLRNLQQYQ QL+EM ++FNQQL QLPK
Sbjct 61 GYFLAIKPKLDAISTAQAQEQNLLNEFREKDSKLRNLQQYQVQLQEMESNFNQQLAQLPK 120
Query 121 ESEIPGLVEDINMTGVNSGLKFKNIRLENEVKQEFFIEQPISIEATGDYHAFGAFVSGIA 180
E+EIP LVEDINMTGVNSGLKFKNIRLENEV+QEFFIEQPISI+ATGDYHAFGAFVS IA
Sbjct 121 ETEIPSLVEDINMTGVNSGLKFKNIRLENEVRQEFFIEQPISIDATGDYHAFGAFVSAIA 180
Query 181 ALPRIVTLHDFVIEAKQSKEKTDIPEVDYAVKAKTYRYIGVDEQGNASA 229
ALPRIVTLHDFVIE KQ KEK DIPE+ Y+VKAKTYRYIG D+Q + ++
Sbjct 181 ALPRIVTLHDFVIEGKQVKEKADIPEISYSVKAKTYRYIGADDQASGAS 229
>A0A7T9UJH3 Type 4a pilus biogenesis protein PilO [Acinetobacter
ursingii]
Length=237
Score = 363 bits (933), Expect = 3e-132
Identities = 175/229 (76%), Positives = 199/229 (87%), Gaps = 0/229 (0%)
Query 1 MKLDQLDKTPKESGQPKKKRMNVEKFFQQFNMLDMSNYGSWPLSVKITCWIFIFFLVCAL 60
M D+ ++ E PKKK++ ++KF QQFN LDM+NYG WPLSVKITCWIFIFF VCAL
Sbjct 1 MSRDEFNELDPEVAAPKKKKLTLDKFLQQFNTLDMNNYGGWPLSVKITCWIFIFFAVCAL 60
Query 61 GYFVVIRPQLDDIQTAQAQEKNLLNEFREKQSKLRNLQQYQHQLEEMRASFNQQLTQLPK 120
GYF+ I+P+LD I TAQAQE+NLLNEFREK SKLRNLQQYQ QL+EM ++FNQQL QLPK
Sbjct 61 GYFLAIKPKLDAISTAQAQEQNLLNEFREKDSKLRNLQQYQVQLQEMESNFNQQLAQLPK 120
Query 121 ESEIPGLVEDINMTGVNSGLKFKNIRLENEVKQEFFIEQPISIEATGDYHAFGAFVSGIA 180
E+EIP LVEDINMTGVNSGLKFKNIRLENEVKQEFFIEQPISI+ATGDYHAFGAFVS IA
Sbjct 121 ETEIPSLVEDINMTGVNSGLKFKNIRLENEVKQEFFIEQPISIDATGDYHAFGAFVSAIA 180
Query 181 ALPRIVTLHDFVIEAKQSKEKTDIPEVDYAVKAKTYRYIGVDEQGNASA 229
ALPRIVTLHDFVIE KQ KEK DIPE+ Y++KAKTYRYIG D+Q + ++
Sbjct 181 ALPRIVTLHDFVIEGKQVKEKADIPEISYSLKAKTYRYIGADDQASGAS 229
>A0A009ZLB8 Pilus assembly, PilO family protein [Acinetobacter
sp. 479375]
Length=237
Score = 363 bits (933), Expect = 3e-132
Identities = 175/229 (76%), Positives = 199/229 (87%), Gaps = 0/229 (0%)
Query 1 MKLDQLDKTPKESGQPKKKRMNVEKFFQQFNMLDMSNYGSWPLSVKITCWIFIFFLVCAL 60
M D+ ++ E PKKK++ ++KF QQFN LDM+NYG WPLSVKITCWIFIFF VCAL
Sbjct 1 MSRDEFNELDPEVAAPKKKKLTLDKFLQQFNTLDMNNYGGWPLSVKITCWIFIFFAVCAL 60
Query 61 GYFVVIRPQLDDIQTAQAQEKNLLNEFREKQSKLRNLQQYQHQLEEMRASFNQQLTQLPK 120
GYF+ I+P+LD I TAQAQE+NLLNEFREK SKLRNLQQYQ QL+EM ++FNQQL QLPK
Sbjct 61 GYFLAIKPKLDAISTAQAQEQNLLNEFREKDSKLRNLQQYQVQLQEMESNFNQQLAQLPK 120
Query 121 ESEIPGLVEDINMTGVNSGLKFKNIRLENEVKQEFFIEQPISIEATGDYHAFGAFVSGIA 180
E+EIP LVEDINMTGVNSGLKFKNIRLENEVKQEFFIEQPISI+ATGDYHAFGAFVS IA
Sbjct 121 ETEIPSLVEDINMTGVNSGLKFKNIRLENEVKQEFFIEQPISIDATGDYHAFGAFVSAIA 180
Query 181 ALPRIVTLHDFVIEAKQSKEKTDIPEVDYAVKAKTYRYIGVDEQGNASA 229
ALPRIVTLHDFVIE KQ KEK DIPE+ Y++KAKTYRYIG D+Q + ++
Sbjct 181 ALPRIVTLHDFVIEGKQVKEKADIPEISYSLKAKTYRYIGADDQASGAS 229
>A0A3R9CU58 Type 4a pilus biogenesis protein PilO [Acinetobacter
sp. FDAARGOS_515]
Length=237
Score = 363 bits (933), Expect = 3e-132
Identities = 175/229 (76%), Positives = 199/229 (87%), Gaps = 0/229 (0%)
Query 1 MKLDQLDKTPKESGQPKKKRMNVEKFFQQFNMLDMSNYGSWPLSVKITCWIFIFFLVCAL 60
M D+ ++ E PKKK++ ++KF QQFN LDM+NYG WPLSVKITCWIFIFF VCAL
Sbjct 1 MSRDEFNELDPEVAAPKKKKLTLDKFLQQFNTLDMNNYGGWPLSVKITCWIFIFFAVCAL 60
Query 61 GYFVVIRPQLDDIQTAQAQEKNLLNEFREKQSKLRNLQQYQHQLEEMRASFNQQLTQLPK 120
GYF+ I+P+LD I TAQAQE+NLLNEFREK SKLRNLQQYQ QL+EM ++FNQQL QLPK
Sbjct 61 GYFLAIKPKLDAISTAQAQEQNLLNEFREKDSKLRNLQQYQVQLQEMESNFNQQLAQLPK 120
Query 121 ESEIPGLVEDINMTGVNSGLKFKNIRLENEVKQEFFIEQPISIEATGDYHAFGAFVSGIA 180
E+EIP LVEDINMTGVNSGLKFKNIRLENEVKQEFFIEQPISI+ATGDYHAFGAFVS IA
Sbjct 121 ETEIPSLVEDINMTGVNSGLKFKNIRLENEVKQEFFIEQPISIDATGDYHAFGAFVSAIA 180
Query 181 ALPRIVTLHDFVIEAKQSKEKTDIPEVDYAVKAKTYRYIGVDEQGNASA 229
ALPRIVTLHDFVIE KQ KEK DIPE+ Y++KAKTYRYIG D+Q + ++
Sbjct 181 ALPRIVTLHDFVIEGKQVKEKADIPEISYSLKAKTYRYIGADDQASGAS 229
>A0A3D2SIJ7 Type IV pilus biogenesis protein PilO [Acinetobacter
ursingii]
Length=237
Score = 363 bits (932), Expect = 4e-132
Identities = 175/229 (76%), Positives = 198/229 (86%), Gaps = 0/229 (0%)
Query 1 MKLDQLDKTPKESGQPKKKRMNVEKFFQQFNMLDMSNYGSWPLSVKITCWIFIFFLVCAL 60
M D+ ++ E PKKK++ ++KF QQFN LDM+NYG WPLSVKITCW FIFF VCAL
Sbjct 1 MSRDEFNELDPEVAAPKKKKLTLDKFLQQFNTLDMNNYGGWPLSVKITCWFFIFFAVCAL 60
Query 61 GYFVVIRPQLDDIQTAQAQEKNLLNEFREKQSKLRNLQQYQHQLEEMRASFNQQLTQLPK 120
GYF+ I+P+LD I TAQAQE+NLLNEFREK SKLRNLQQYQ QL+EM ++FNQQL QLPK
Sbjct 61 GYFLAIKPKLDAISTAQAQEQNLLNEFREKDSKLRNLQQYQVQLQEMESNFNQQLAQLPK 120
Query 121 ESEIPGLVEDINMTGVNSGLKFKNIRLENEVKQEFFIEQPISIEATGDYHAFGAFVSGIA 180
E+EIP LVEDINMTGVNSGLKFKNIRLENEVKQEFFIEQPISI+ATGDYHAFGAFVS IA
Sbjct 121 ETEIPSLVEDINMTGVNSGLKFKNIRLENEVKQEFFIEQPISIDATGDYHAFGAFVSAIA 180
Query 181 ALPRIVTLHDFVIEAKQSKEKTDIPEVDYAVKAKTYRYIGVDEQGNASA 229
ALPRIVTLHDFVIE KQ KEK DIPE+ Y+VKAKTYRYIG D+Q + ++
Sbjct 181 ALPRIVTLHDFVIEGKQVKEKADIPEISYSVKAKTYRYIGADDQASGAS 229
>R9B7D1 Type IV pilus assembly protein PilO [Acinetobacter sp.
CIP 110321]
Length=247
Score = 361 bits (927), Expect = 3e-131
Identities = 180/246 (73%), Positives = 211/246 (86%), Gaps = 3/246 (1%)
Query 1 MKLDQLDKTPKESGQPKKKRMNVEKFFQQFNMLDMSNYGSWPLSVKITCWIFIFFLVCAL 60
MKLD+ D +++ KKK+M V++FFQQFN LDM+NYGSWPLSVKITCWIF+F V AL
Sbjct 1 MKLDKSDDLNQDTVAVKKKKMTVDQFFQQFNTLDMNNYGSWPLSVKITCWIFVFLAVAAL 60
Query 61 GYFVVIRPQLDDIQTAQAQEKNLLNEFREKQSKLRNLQQYQHQLEEMRASFNQQLTQLPK 120
GYFVVI+ QL+ I A+AQE++LLNEF+EK SKLRNLQQYQ QL+EM A+FNQQL QLPK
Sbjct 61 GYFVVIKSQLESIANAEAQEQSLLNEFKEKDSKLRNLQQYQAQLQEMEANFNQQLEQLPK 120
Query 121 ESEIPGLVEDINMTGVNSGLKFKNIRLENEVKQEFFIEQPISIEATGDYHAFGAFVSGIA 180
E+EIP LVEDIN+TGVNSGLKFKNIRLE+EVKQEFFIEQPISI+ATGDYHAFGAFV+GIA
Sbjct 121 ETEIPSLVEDINLTGVNSGLKFKNIRLESEVKQEFFIEQPISIDATGDYHAFGAFVTGIA 180
Query 181 ALPRIVTLHDFVIEAKQ-SKEKTDIPEVDYAVKAKTYRYIGVDEQGN--ASAVQANTSTT 237
ALPRIVTLHDF +EAK+ +++K+DIP V+Y VKAKTYRY+G DEQ N A A A T+ T
Sbjct 181 ALPRIVTLHDFTVEAKEDTQKKSDIPVVNYTVKAKTYRYVGADEQTNNAAGAATAQTTAT 240
Query 238 TPAQGG 243
PAQGG
Sbjct 241 PPAQGG 246
>N8XT86 Pilus assembly protein, PilO [Acinetobacter sp. CIP 56.2]
Length=247
Score = 360 bits (924), Expect = 9e-131
Identities = 179/246 (73%), Positives = 211/246 (86%), Gaps = 3/246 (1%)
Query 1 MKLDQLDKTPKESGQPKKKRMNVEKFFQQFNMLDMSNYGSWPLSVKITCWIFIFFLVCAL 60
MKLD+ D +++ KKK+M V++FFQQFN LDM+NYGSWPLSVKITCWIF+F V AL
Sbjct 1 MKLDKSDDLNQDTVAVKKKKMTVDQFFQQFNTLDMNNYGSWPLSVKITCWIFVFLAVAAL 60
Query 61 GYFVVIRPQLDDIQTAQAQEKNLLNEFREKQSKLRNLQQYQHQLEEMRASFNQQLTQLPK 120
GYFVVI+ QL+ I A+AQE++LLNEF+EK SKLRNLQQYQ QL+EM A+FNQQL QLPK
Sbjct 61 GYFVVIKSQLESIANAEAQEQSLLNEFKEKDSKLRNLQQYQAQLQEMEANFNQQLEQLPK 120
Query 121 ESEIPGLVEDINMTGVNSGLKFKNIRLENEVKQEFFIEQPISIEATGDYHAFGAFVSGIA 180
E+EIP LVEDIN+TGVNSGLKFKNIRLE+EVKQEFFIEQPISI+ATGDYHAFGAFV+GI+
Sbjct 121 ETEIPSLVEDINLTGVNSGLKFKNIRLESEVKQEFFIEQPISIDATGDYHAFGAFVTGIS 180
Query 181 ALPRIVTLHDFVIEAKQ-SKEKTDIPEVDYAVKAKTYRYIGVDEQGN--ASAVQANTSTT 237
ALPRIVTLHDF +EAK+ +++K+DIP V+Y VKAKTYRY+G DEQ N A A A T+ T
Sbjct 181 ALPRIVTLHDFTVEAKEDTQKKSDIPVVNYTVKAKTYRYVGADEQTNNAAGAATAQTTAT 240
Query 238 TPAQGG 243
PAQGG
Sbjct 241 PPAQGG 246
>F7IY50 Type IV pilus biogenesis protein [Pseudomonas amygdali
pv. tabaci]
Length=207
Score = 164 bits (415), Expect = 4e-54
Identities = 84/186 (45%), Positives = 117/186 (63%), Gaps = 3/186 (2%)
Query 33 LDMSNYGSWPLSVKITCWIFIFFLVCALGYFVVIRPQLDDIQTAQAQEKNLLNEFREKQS 92
LD++N GSWP +VK + + L+ ALGYF I+ +++AQ E L +F K
Sbjct 18 LDLNNLGSWPAAVKAIAGVLVAVLIFALGYFFFIQDLETQLESAQNSEVTLKEQFSNKAF 77
Query 93 KLRNLQQYQHQLEEMRASFNQQLTQLPKESEIPGLVEDINMTGVNSGLKFKNIRLENEVK 152
+ NL+ Y+ Q+EEM +F L QLP ++E+PGL+EDI TG+ SGL+F+ I+L E
Sbjct 78 QAANLEPYKKQMEEMENTFGALLRQLPSDTEVPGLLEDITRTGLGSGLEFEEIKLLPEAV 137
Query 153 QEFFIEQPISIEATGDYHAFGAFVSGIAALPRIVTLHDFVIEAKQSKEKTDIPEVDYAVK 212
Q+F+IE PI I G YH FVSG+A+LPRIVTLHDF I+ K T ++ ++
Sbjct 138 QQFYIELPIQITVVGGYHDLATFVSGVASLPRIVTLHDFEIKPVDPKVPT---KLRMSIL 194
Query 213 AKTYRY 218
AKTYRY
Sbjct 195 AKTYRY 200
>Q52541 Membrane protein [Pseudomonas syringae]
Length=207
Score = 164 bits (415), Expect = 4e-54
Identities = 84/186 (45%), Positives = 117/186 (63%), Gaps = 3/186 (2%)
Query 33 LDMSNYGSWPLSVKITCWIFIFFLVCALGYFVVIRPQLDDIQTAQAQEKNLLNEFREKQS 92
LD++N GSWP +VK + + L+ ALGYF I+ +++AQ E L +F K
Sbjct 18 LDLNNLGSWPAAVKAIAGVLVAVLIFALGYFFFIQDLETQLESAQNSEVTLKEQFSNKAF 77
Query 93 KLRNLQQYQHQLEEMRASFNQQLTQLPKESEIPGLVEDINMTGVNSGLKFKNIRLENEVK 152
+ NL+ Y+ Q+EEM +F L QLP ++E+PGL+EDI TG+ SGL+F+ I+L E
Sbjct 78 QAANLEPYKKQMEEMENTFGALLRQLPSDTEVPGLLEDITRTGLGSGLEFEEIKLLPEAV 137
Query 153 QEFFIEQPISIEATGDYHAFGAFVSGIAALPRIVTLHDFVIEAKQSKEKTDIPEVDYAVK 212
Q+F+IE PI I G YH FVSG+A+LPRIVTLHDF I+ K T ++ ++
Sbjct 138 QQFYIELPIQITVVGGYHDLATFVSGVASLPRIVTLHDFEIKPVDPKVPT---KLRMSIL 194
Query 213 AKTYRY 218
AKTYRY
Sbjct 195 AKTYRY 200
>Q51353 PilO protein [Pseudomonas aeruginosa]
Length=207
Score = 155 bits (392), Expect = 1e-50
Identities = 80/188 (43%), Positives = 116/188 (62%), Gaps = 3/188 (2%)
Query 31 NMLDMSNYGSWPLSVKITCWIFIFFLVCALGYFVVIRPQLDDIQTAQAQEKNLLNEFREK 90
N LD++N GSWP +VK+ + + V ALGY + ++ A+E+ L +F K
Sbjct 16 NDLDLNNIGSWPAAVKVIVCVLLTAAVLALGYNFHLSDMQAQLEQQAAEEETLKQQFSTK 75
Query 91 QSKLRNLQQYQHQLEEMRASFNQQLTQLPKESEIPGLVEDINMTGVNSGLKFKNIRLENE 150
+ NL+ Y+ Q++EM SF L QLP ++E+PGL+EDI TG+ SGL+F+ I+L E
Sbjct 76 AFQAANLEAYKAQMKEMEESFGALLRQLPSDTEVPGLLEDITRTGLGSGLEFEEIKLLPE 135
Query 151 VKQEFFIEQPISIEATGDYHAFGAFVSGIAALPRIVTLHDFVIEAKQSKEKTDIPEVDYA 210
V Q+F+IE PI I G YH FVSG+++LPRIVTLHDF I+ + ++ +
Sbjct 136 VAQQFYIELPIQISVVGGYHDLATFVSGVSSLPRIVTLHDFEIKPVAPGSTS---KLRMS 192
Query 211 VKAKTYRY 218
+ AKTYRY
Sbjct 193 ILAKTYRY 200
>A0A5P2TYY0 Type 4 pilus PilO [Lysobacter enzymogenes]
Length=227
Score = 129 bits (324), Expect = 3e-40
Identities = 67/204 (33%), Positives = 112/204 (55%), Gaps = 8/204 (4%)
Query 33 LDMSNYGSWPLSVKITCWIFIFFLVCALGYFVVIRPQLDDIQTAQAQEKNLLNEFREKQS 92
LD +N GSWP +I + ++ L +++ + + +++ + +E L F KQ
Sbjct 10 LDFNNIGSWPRQAQIVFCAVVGLVIVGLAWYLFVSDKRTQLESLEGKETELRQTFETKQG 69
Query 93 KLRNLQQYQHQLEEMRASFNQQLTQLPKESEIPGLVEDINMTGVNSGLKFKNIRLENEVK 152
+ NL+ + QL +M Q L QLP ++E+P L+ DI+ T + +G+ + + EV
Sbjct 70 RAANLEPLKQQLTQMEQQLQQMLRQLPSKTEMPDLIVDISQTALATGISNELFQPGAEVP 129
Query 153 QEFFIEQPISIEATGDYHAFGAFVSGIAALPRIV--TLHDFVIEAKQSKEK------TDI 204
+EF+ E+PI++ G YH FGAFVSG+A+LPR+V T+HD ++ K + K T
Sbjct 130 KEFYAEKPIALRMVGTYHQFGAFVSGVASLPRVVIMTMHDISLKPKGNNSKDAMGGITPN 189
Query 205 PEVDYAVKAKTYRYIGVDEQGNAS 228
++ A KTYRY+ +E S
Sbjct 190 SPLELAGTVKTYRYLDEEEMAAQS 213
>B6SE78 PilO [Kingella kingae]
Length=207
Score = 92.8 bits (229), Expect = 2e-26
Identities = 53/199 (27%), Positives = 96/199 (48%), Gaps = 0/199 (0%)
Query 31 NMLDMSNYGSWPLSVKITCWIFIFFLVCALGYFVVIRPQLDDIQTAQAQEKNLLNEFREK 90
N D++ P V+ I + ++ +GYFV + Q ++ AQA+E+ L E+ EK
Sbjct 3 NKFDINKLHLQPKPVQFLAAIVVAVVLVVIGYFVFFQTQWTELTDAQAKEEELKTEYSEK 62
Query 91 QSKLRNLQQYQHQLEEMRASFNQQLTQLPKESEIPGLVEDINMTGVNSGLKFKNIRLENE 150
+ +L + +L+++ AS L QLP +EIP L+++++ +GL I E +
Sbjct 63 SIRAASLDNLKLELQQIEASTQVLLKQLPTSAEIPTLIQELHQAAAKNGLTMSAIVPEQK 122
Query 151 VKQEFFIEQPISIEATGDYHAFGAFVSGIAALPRIVTLHDFVIEAKQSKEKTDIPEVDYA 210
V + P SI G+Y FV + + RIVTL + + + ++ +
Sbjct 123 VTEGPVERLPFSISVAGNYDQIAQFVRDVGQMSRIVTLANISLSQATDDKNKGQGKLVFT 182
Query 211 VKAKTYRYIGVDEQGNASA 229
A TY+ + V E +A++
Sbjct 183 AMANTYKALDVSEMASAAS 201
>O05128 PilO [Neisseria gonorrhoeae]
Length=215
Score = 89.0 bits (219), Expect = 6e-25
Identities = 54/205 (26%), Positives = 104/205 (51%), Gaps = 7/205 (3%)
Query 33 LDMSNYGSWPLSVKITCWIFIFFLVCALGYFVVIRPQLDDIQTAQAQEKNLLNEFREKQS 92
LD++N L ++ + + V LGY + + Q++ ++ +A+E L N +++K
Sbjct 10 LDLNNLHLLNLPARLFIALLVVAAVLGLGYAGLFKSQMESLEEYEAKETELKNTYKQKSI 69
Query 93 KLRNLQQYQHQLEEMRASFNQQLTQLPKESEIPGLVEDINMTGVNSGLKFKNIRLENEVK 152
+L + +L +R++F+ L QLP ++EIP LV++++ G ++GL+ ++ + V
Sbjct 70 DAASLNNLRDELASIRSAFDIMLKQLPTDAEIPNLVQELHQAGSSNGLRLDSVMPQPPVD 129
Query 153 QEFFIEQPISIEATGDYHAFGAFVSGIAALPRIVTLHDFVIEAKQSKEKTDIPE-----V 207
+ P SI TG+Y F + +L RI+TL ++ QS E P+ +
Sbjct 130 DGPIKKLPYSISITGNYEQISQFTRDVGSLSRIITLES--LKIAQSPENGGNPDGKSSIL 187
Query 208 DYAVKAKTYRYIGVDEQGNASAVQA 232
+ + A TY+ V+E +A A
Sbjct 188 NLSAIATTYQAKSVEELAAEAAQNA 212
>Q50970 PilO [Neisseria gonorrhoeae]
Length=215
Score = 88.6 bits (218), Expect = 9e-25
Identities = 53/205 (26%), Positives = 104/205 (51%), Gaps = 7/205 (3%)
Query 33 LDMSNYGSWPLSVKITCWIFIFFLVCALGYFVVIRPQLDDIQTAQAQEKNLLNEFREKQS 92
LD++N L ++ + + V LGY + + Q++ ++ +A+E L N +++K
Sbjct 10 LDLNNLHLLNLPARLFIALLVVAAVLGLGYAGLFKSQMESLEEYEAKETELKNTYKQKSI 69
Query 93 KLRNLQQYQHQLEEMRASFNQQLTQLPKESEIPGLVEDINMTGVNSGLKFKNIRLENEVK 152
+L + +L +R++F+ L QLP ++EIP LV++++ G ++GL+ ++ + V
Sbjct 70 DAASLNNLRDELASIRSAFDIMLKQLPTDAEIPNLVQELHQAGSSNGLRLDSVMPQPPVD 129
Query 153 QEFFIEQPISIEATGDYHAFGAFVSGIAALPRIVTLHDFVIEAKQSKEKTDIPE-----V 207
+ P SI TG+Y F + +L RI+TL ++ QS E P+ +
Sbjct 130 DGPIKKLPYSISITGNYEQISQFTRDVGSLSRIITLES--LKIAQSPENGGNPDGKSSIL 187
Query 208 DYAVKAKTYRYIGVDEQGNASAVQA 232
+ + A TY+ ++E +A A
Sbjct 188 NLSAIATTYQAKSIEELAAEAAQNA 212
>Q306N4 PilO [Myxococcus xanthus (strain DK1622)]
Length=205
Score = 82.8 bits (203), Expect = 1e-22
Identities = 50/197 (25%), Positives = 106/197 (54%), Gaps = 7/197 (4%)
Query 42 PLSVKITCWIFIFFLVCALGYFVVIRPQLDDIQTAQAQEKNLLNEFREKQSKLRNLQQYQ 101
P ++K F+ + A +F+VI+P ++I A A+ + L E +K +NL + +
Sbjct 12 PPAIKFGGLAFVVGALTAANFFMVIQPTEEEIGWAVAERRKLDLELADKSEIAQNLNERR 71
Query 102 HQLEEMRASFNQQLTQLPKESEIPGLVEDINMTGVNSGLKFKNIR--LENEVKQEFFIEQ 159
+++ + ++ LT+LP++ +I L+ IN G SGL+ ++ E+ EFF
Sbjct 72 REMDVLEQKLSEALTELPEQRDIEELLAQINDIGKKSGLELSSVTPGKESVGGGEFFARI 131
Query 160 PISIEATGDYHAFGAFVSGIAALPRIVTLHDFVIEAKQSKEKTDIPEVDYAVKAKTYRYI 219
PI + +G+YH F+ +A + RIV +++ ++ + K + + + ++ +A T+R++
Sbjct 132 PIKMTVSGNYHEIALFLQEMANMRRIVNVNNIKFDSAKLKNEKVVLQSEF--QATTFRFV 189
Query 220 GVDEQGNASAVQANTST 236
EQ A++ N+++
Sbjct 190 ---EQKAAASTAGNSNS 203
Lambda K H a alpha
0.319 0.135 0.387 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 796775
Database: 1564cfa5515d331ff2abad96e476946c.TrEMBL.fasta
Posted date: May 13, 2024 8:20 AM
Number of letters in database: 4,828
Number of sequences in database: 21
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
