BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 846dae42cec688566bb61a974c292cfd.SwissProt.fasta
5 sequences; 3,183 total letters
Query= ACIAD3291
Length=717
Score E
Sequences producing significant alignments: (Bits) Value
P75870 Inner membrane protein YccS [Escherichia coli (strain K12)] 597 0.0
P44289 Uncharacterized protein HI_1680 [Haemophilus influenzae (s... 357 1e-116
O33369 Uncharacterized protein ORF2 [Neisseria gonorrhoeae] 177 1e-52
P45537 Uncharacterized protein YhfK [Escherichia coli (strain K12)] 125 3e-33
O32225 Uncharacterized membrane protein YvaC [Bacillus subtilis (... 47.0 9e-09
>P75870 Inner membrane protein YccS [Escherichia coli (strain
K12)]
Length=717
Score = 597 bits (1540), Expect = 0.0
Identities = 311/707 (44%), Positives = 455/707 (64%), Gaps = 12/707 (2%)
Query 11 YNFNSTTVYCLQIFIVLSGTTLGLRYLGHHELIIPVTLGAIATALTDFDDRLSIRLRNLV 70
Y +NS +Y +IFI L GTT +LG +L IP+TLG +A ALTD DDRL+ RLRNL+
Sbjct 9 YTWNSAWLYYARIFIALCGTTAFPWWLGDVKLTIPLTLGMVAAALTDLDDRLAGRLRNLI 68
Query 71 YVSFLFFVVSSVLEFLSPYPFLLIIYLSLSSGFLILLGSLGQRYATISFGTILLSIYTLF 130
F FF+ S+ +E L P+P+L I L+LS+ ILLG LGQRYATI+FG +L++IYT+
Sbjct 69 ITLFCFFIASASVELLFPWPWLFAIGLTLSTSGFILLGGLGQRYATIAFGALLIAIYTML 128
Query 131 GLGEYQVWYQQPLYFVYGVIWYGLTSIIFYMIKPTLAVQDNLSQIFSALAKLLNSKSKLF 190
G Y+ WYQQP+Y + G +WY + ++I +++ P +QDNL++ + LA+ L KS++F
Sbjct 129 GTSLYEHWYQQPMYLLAGAVWYNVLTLIGHLLFPVRPLQDNLARCYEQLARYLELKSRMF 188
Query 191 DPDNHENVEQLLFDLSLENAQTVQRLNTAKASLLTRLKASRVNQNSIYWLHLYFVAQDIH 250
DPD + + L+DL+L N + LN K SLLTRL+ R + + LH YFVAQDIH
Sbjct 189 DPDIEDQSQAPLYDLALANGLLMATLNQTKLSLLTRLRGDRGQRGTRRTLHYYFVAQDIH 248
Query 251 EQVSANYLHYEQIQDNFSRSDLIFRIQKNIRLQAIACETLCQCILTHRPYQPAPELSQAL 310
E+ S++++ Y+ ++++F SD++FR Q+ + +Q AC+ L +CIL +PYQ P +A
Sbjct 249 ERASSSHIQYQTLREHFRHSDVLFRFQRLMSMQGQACQQLSRCILLRQPYQHDPHFERAF 308
Query 311 DQLERSMQDWIRMNPDNIEVKNLRLILNNLHIIDDQLHNLNDIQYTYPARFQQHVDNLN- 369
++ +++ +K L +LNNL ID QL + Q A+ H ++ N
Sbjct 309 THIDAALERMRDNGAPADLLKTLGFLLNNLRAIDAQLATIESEQ----AQALPHNNDENE 364
Query 370 LLDDDIHGIKDLWLKFRQHLHPTSALFRHAVRIAFVFAAGSLISLLPFAKNGYWILLTGL 429
L DD HG+ D+WL+ +H P SALFRHAVR++ V G I + +GYWILLT L
Sbjct 365 LADDSPHGLSDIWLRLSRHFTPESALFRHAVRMSLVLCFGYAIIQITGMHHGYWILLTSL 424
Query 430 FVCQVTYFATKSRLKLRTFGTLLGVILGIPILYFVPSVEGQLMITVICGVCFFYLRQKKY 489
FVCQ Y AT+ RLKLR GTL+G+ +GIP+L+FVPS+EGQL++ VI GV FF R +Y
Sbjct 425 FVCQPNYNATRHRLKLRIIGTLVGIAIGIPVLWFVPSLEGQLVLLVITGVLFFAFRNVQY 484
Query 490 ALATSMATLMVLLIFNLKGSGFNIILPRMMDTLLGCGIAWFAVSFIWPDWNFRNISNNIR 549
A AT TL+VLL FNL G GF + LPR++DTL+GC IAW AVS+IWPDW FRN+ +
Sbjct 485 AHATMFITLLVLLCFNLLGEGFEVALPRVIDTLIGCAIAWAAVSYIWPDWQFRNLPRMLE 544
Query 550 NSTQASLDYFDAVVQQYDAGRTNSMDYRRTRRLAHNAQIELSSMISSLSAEPSPNPQLIH 609
+T+A+ Y DA+++QY GR N + YR RR AHN EL+S++S++S+EP+ PQ+
Sbjct 545 RATEANCRYLDAILEQYHQGRDNRLAYRIARRDAHNRDAELASVVSNMSSEPNVTPQIRE 604
Query 610 YAFRYLVYSHSQLSYISALGSHREKIGDQYIL----DLMRWCLNTLKQVLIEQRTLSKTD 665
AFR L +H+ SYISALG+HRE++ + IL D + + + L ++ +++
Sbjct 605 AAFRLLCLNHTFTSYISALGAHREQLTNPEILAFLDDAVCYVDDALHHQPADEERVNEAL 664
Query 666 IKIRLQEIYDLAARESTSEYFMLILKQISLLLETLPELVTLRRQLLE 712
++ Q + L R + E L+++Q+ LL+ LPE+ L+RQ+ +
Sbjct 665 ASLK-QRMQQLEPRADSKE--PLVVQQVGLLIALLPEIGRLQRQITQ 708
>P44289 Uncharacterized protein HI_1680 [Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=718
Score = 357 bits (916), Expect = 1e-116
Identities = 213/704 (30%), Positives = 379/704 (54%), Gaps = 23/704 (3%)
Query 14 NSTTVYCLQIFIVLSGTTLGLRYLGHHELIIPVTLGAIATALTDFDDRLSIRLRNLVYVS 73
N+ + + +FI ++ +G+ + +P+ LG IA L D D+RL+ RL+N+ +
Sbjct 6 NAKVISTIPVFIAVNIAAVGIWFFDISSQSMPLILGIIAGGLVDLDNRLTGRLKNVFFTL 65
Query 74 FLFFVVSSVLEFLSPYPFLLIIYLSLSSGFLILLGSLGQRYATISFGTILLSIYT-LFGL 132
F + S +++ P I+ +++ + ++G++GQRY+TI+FG++++++YT L +
Sbjct 66 IAFSISSFIVQLHIGKPIQYIVLMTVLTFIFTMIGAVGQRYSTIAFGSLVVALYTTLTYI 125
Query 133 GEYQVWYQQPLYFVYGVIWYGLTSIIFYMIKPTLAVQDNLSQIFSALAKLLNSKSKLFDP 192
E VW+ P+ + G + Y + ++I Y+ P VQ+++++ F AL + L++KS FDP
Sbjct 126 PEVNVWFINPVMILCGTLLYSVVTLIVYLFFPNRPVQESVAKAFCALGEYLDTKSCFFDP 185
Query 193 DNHENVEQLLFDLSLENAQTVQRLNTAKASLLTRLKASRVNQNSIYWLHLYFVAQDIHEQ 252
D +E+ + +++NA V N + +L R++ + + L YF AQDIHE+
Sbjct 186 DEVAEIEKKHLNFAMKNANVVTAFNIVRTALFYRIRGQHRHPLTQRMLRYYFAAQDIHER 245
Query 253 VSANYLHYEQIQDNFSRSDLIFRIQKNIRLQAIACETLCQCILTHRPYQPAPELSQALDQ 312
++ + Y+QI + +DLIFRIQ+ + LQA +C+ + + ++PY + +AL
Sbjct 246 ANSTHFDYQQITEKLKNTDLIFRIQRLLELQAQSCKEITASLRENKPYHFNKRVERALLG 305
Query 313 LERSMQDWIRMN-PDNIEVKNLRLILNNLHIIDDQLHNLNDIQYTYPARFQQHVDNLNLL 371
S + + D E+ +++ +L+NL I+ QL L Q H
Sbjct 306 TLHSFDLYRAQHLNDQDELIDIQTLLDNLQSINWQLRQLAQDTTVTEQLAQIHT------ 359
Query 372 DDDIHGIKDLWLKFRQHLHPTSALFRHAVRIAF-VFAAGSLISLLPFAKNGYWILLTGLF 430
+ I G+K++ H S LFRHAVR++ VF +++ F GYWILLT +F
Sbjct 360 -EQITGLKNISAVIFSHFTFESPLFRHAVRLSIVVFLCCAIVEFFQF-NLGYWILLTTVF 417
Query 431 VCQVTYFATKSRLKLRTFGTLLGVILGIPILYFVPSVEGQLMITVICGVCFFYLRQKKYA 490
VCQ Y ATK RL+ R GT+LGV++G + Y P++E +L + V+ FF+ R Y+
Sbjct 418 VCQPNYSATKVRLRQRIIGTILGVVVGSLLPYLNPTLELKLGLVVLTSTLFFFFRSNNYS 477
Query 491 LATSMATLMVLLIFNLKG-SGFNIILPRMMDTLLGCGIAWFAVSFIWPDWNFRNISNNIR 549
+T TL VLL F++ G ++PR++DTLLG I+WFAVS++WPDW + +
Sbjct 478 FSTFFITLQVLLSFDVMGFDTAAALMPRLLDTLLGAAISWFAVSYLWPDWKYLQLDKVSH 537
Query 550 NSTQASLDYFDAVVQQYDAGRTNSMDYRRTRRLAHNAQIELSSMISSLSAEPSPNPQLIH 609
+ ++ Y ++ Q G+++ + YR RR AH LS+ +S+++ EP +
Sbjct 538 QALRSDAVYLLHIISQLQFGKSDDLKYRIARRNAHQYAAALSTTLSNMNNEPVKYKAYLQ 597
Query 610 YAFRYLVYSHSQLSYISALGSHREKIGD-QYILDLMRWCLNTLKQVLIEQRTLSKTDIKI 668
F L ++S LSYISALG++R+++ + Q + K+++ + + I
Sbjct 598 KGFDLLKLNYSLLSYISALGAYRDRMKNLQQTAQFLSGFYPVAKKIIYTLEHIEEIPEAI 657
Query 669 RLQE-------IYDLAARESTSE---YFMLILKQISLLLETLPE 702
Q+ + +L +E T+E F L +Q++L+ + LP+
Sbjct 658 FNQQQESIETHLKELEKQEMTAEERAVFSLPYQQLNLITQLLPQ 701
>O33369 Uncharacterized protein ORF2 [Neisseria gonorrhoeae]
Length=417
Score = 177 bits (450), Expect = 1e-52
Identities = 108/306 (35%), Positives = 160/306 (52%), Gaps = 5/306 (2%)
Query 326 DNIEVKNLRLILNNLHIIDDQLHNLNDIQYTYPARFQQHVDNLNLLDDDIHGIKDLWLKF 385
D+ ++++L +L+NL +D Q L PA + + + + K+ W
Sbjct 12 DSXDIRHLSRLLDNLGSVDQQFRQLRHSDS--PAE-NDRMGDTRIAALETGSFKNTWQAI 68
Query 386 RQHLHPTSALFRHAVRIAFVFAAGSLISLLPFAKNGYWILLTGLFVCQVTYFATKSRLKL 445
R L+ S +FRHAVR++ V AA I GYWILLT LFVCQ Y ATKSR+
Sbjct 69 RPQLNLESGVFRHAVRLSLVVAAACTIVEALNLNLGYWILLTRLFVCQPNYTATKSRVYQ 128
Query 446 RTFGTLLGVILGIPILYFVPSVEGQLMITVICGVCFFYLRQKKYALATSMATLMVLLIFN 505
R GT+LGVI+G + YF PSVE +L I + FF R KY+ +T T+ L +
Sbjct 129 RIAGTVLGVIVGSLVPYFTPSVETKLWIVIAGTTLFFMTRTYKYSFSTFFITIQALTSLS 188
Query 506 LKGSGFNIILP-RMMDTLLGCGIAWFAVSFIWPDWNFRNISNNIRNSTQASLDYFDAVVQ 564
L G +P R++DT++G +AW AVS++WPDW + + + +S Y + +
Sbjct 189 LAGLDVYAAMPVRIIDTIIGASLAWAAVSYLWPDWKYLTLERTAALAVCSSGTYLQKIAE 248
Query 565 QYDAGRT-NSMDYRRTRRLAHNAQIELSSMISSLSAEPSPNPQLIHYAFRYLVYSHSQLS 623
+ G T + ++YR TRR AH LSS +S +S+EP+ + A + +
Sbjct 249 RLKTGETGDDIEYRITRRRAHEHTAALSSTLSDMSSEPAKFADTCNPALPCSKPATALTG 308
Query 624 YISALG 629
YISALG
Sbjct 309 YISALG 314
>P45537 Uncharacterized protein YhfK [Escherichia coli (strain
K12)]
Length=700
Score = 125 bits (313), Expect = 3e-33
Identities = 146/627 (23%), Positives = 263/627 (42%), Gaps = 53/627 (8%)
Query 10 HYNFNSTTVYCLQIFIVLSGTTLGLRYLGHHELIIPVTLGAIATALTDFDDRLSIRLRNL 69
+Y T V CL + + G LG G ++P + D + L
Sbjct 16 NYALRQTLVLCLPVAV---GLMLGELRFGLLFSLVPACCN-----IAGLDTPHKRFFKRL 67
Query 70 VYVSFLFFVVSSVLEFLS----PYPFLLIIYLSLSSGFLILLG---SLGQRYATISFGTI 122
+ + LF S + + L P PFLL +G ++LG LG +A + ++
Sbjct 68 IIGASLFATCSLLTQLLLAKDVPLPFLL-------TGLTLVLGVTAELGPLHAKLLPASL 120
Query 123 LLSIYTLFGLGEYQVWYQQPLYFVYGVIWYGLTSIIFYMIKPTLAVQDNLSQIFSALAKL 182
L +I+TL G VW + L + G +WYGL + ++ I ++++LS ++ LA
Sbjct 121 LAAIFTLSLAGYMPVW-EPLLIYALGTLWYGLFNWFWFWIWREQPLRESLSLLYRELADY 179
Query 183 LNSKSKLFDPDNHENVEQLLFDLSLENAQTVQRLNTAKASLLTRLKASRVNQNSIYWLHL 242
+K L H + E+ L L + + V + + + +++ N + L +
Sbjct 180 CEAKYSLLT--QHTDPEKALPPLLVRQQKAVDLITQCYQQM--HMLSAQNNTDYKRMLRI 235
Query 243 YFVAQDIHEQVSANYLHYEQIQDNFSRSDLIFRIQKNIRLQAIACETLCQCILTHRPYQP 302
+ A D+ E +S + E++Q RS I+ N + A L IL HR
Sbjct 236 FQEALDLQEHISVSLHQPEEVQKLVERSHAEEVIRWNAQTVAARLRVLADDILYHR-LPT 294
Query 303 APELSQALDQLERSMQDWIRMNPDNIEVKNLRLILNNLHIIDDQLHNLNDIQYTYPARFQ 362
+ + + LE+ R +PDN Q + + R Q
Sbjct 295 RFTMEKQIGALEKIA----RQHPDNPV---------------GQFCYWHFSRIARVLRTQ 335
Query 363 QHVDNLNLLDDDIHGIKDLWLKFRQHLHPTSALFRHAVRIAFVFAAGSLISLLPFAKNGY 422
+ + +LL D + L + +L S R+A R++ + + SL+ Y
Sbjct 336 KPLYARDLLADKQRRMP-LLPALKSYLSLKSPALRNAGRLSVMLSVASLMGTALHLPKSY 394
Query 423 WILLTGLFVCQVTYFATKSRLKLRTFGTLLGVILGIPILYFVPSVEGQLMITVICGVCFF 482
WIL+T L V Q Y AT+ R+ R+ GT++G+I+ L+F L + +I + +
Sbjct 395 WILMTVLLVTQNGYGATRLRIVNRSVGTVVGLIIAGVALHFKIPEGYTLTLMLITTLASY 454
Query 483 YLRQKKYALATSMATLMVLLIFNLKG-SGFNIILPRMMDTLLGCGIAWFAVSFIWPDWNF 541
+ +K Y AT T+ + L +G ILPR++DT++GC IA+ ++WP W
Sbjct 455 LILRKNYGWATVGFTITAVYTLQLLWLNGEQYILPRLIDTIIGCLIAFGGTVWLWPQWQS 514
Query 542 RNISNNIRNSTQASLDYFDAVVQQYDAGRTNSMDYRRTRRLAHNAQIELSSMISSLSAEP 601
+ N ++ +A + ++ + D T R AHN L + ++ EP
Sbjct 515 GLLRKNAHDALEAYQEAIRLILSE-DPQPTPLAWQRMRVNQAHNT---LYNSLNQAMQEP 570
Query 602 SPNPQLIHYAFRYLVYSHSQLSYISAL 628
+ N + ++ +S + +I+A+
Sbjct 571 AFNSHYLADMKLWVTHSQFIVEHINAM 597
>O32225 Uncharacterized membrane protein YvaC [Bacillus subtilis
(strain 168)]
Length=631
Score = 47.0 bits (110), Expect = 9e-09
Identities = 48/206 (23%), Positives = 79/206 (38%), Gaps = 12/206 (6%)
Query 350 LNDIQYTYPARFQQHVDNLNLLDDDIHGIKDLWLKFRQHLHPTSALFRHAVRIAFVFAAG 409
+N++ Y RF + LD + + + R S + A++ V A
Sbjct 301 INEVLYIASGRFDKQ------LDGEPSRLPSSFYFLRNAFDWKSPVLIRALKYGIVLFAA 354
Query 410 SLISLLPFAKNGYWILLTGLFVCQ-VTYFATKSRLKLRTFGTLLGVILGIPILYFVPSVE 468
+ +L YWI L+ V T T R R+ GT++GVIL IL+F P
Sbjct 355 DMFALAFGFARSYWIPLSAAAVMLGTTVVFTLHRAIQRSAGTVIGVILAGAILFFKPGGV 414
Query 469 GQLMITVICGVCFFYLRQKKYALATSMATLMVLLIFNL----KGSGFNIILPRMMDTLLG 524
L + YALA T L+I G+G+ ++ R+ D +G
Sbjct 415 YIAFCIAALQCLLEMLIVRNYALAVPFLTANALVITESMHGGAGAGY-FMIARLTDVAVG 473
Query 525 CGIAWFAVSFIWPDWNFRNISNNIRN 550
I +W ++ + + +RN
Sbjct 474 SVIGLLGTMLLWRRFSTKRLPELVRN 499
Score = 22.3 bits (46), Expect = 0.36
Identities = 9/24 (38%), Positives = 16/24 (67%), Gaps = 0/24 (0%)
Query 87 SPYPFLLIIYLSLSSGFLILLGSL 110
+P+P+ I +SGF +L+G+L
Sbjct 24 NPFPWKKAIGSGFASGFPVLVGAL 47
Lambda K H a alpha
0.328 0.141 0.424 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1956311
Database: 846dae42cec688566bb61a974c292cfd.SwissProt.fasta
Posted date: Jun 3, 2024 11:22 AM
Number of letters in database: 3,183
Number of sequences in database: 5
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
