BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 32d2e9c6ece17a1a617dc082fa489e2d.TrEMBL.fasta
20 sequences; 2,945 total letters
Query= ACIAD3227
Length=146
Score E
Sequences producing significant alignments: (Bits) Value
Q6F7Q5 Putative transcriptional regulator [Acinetobacter baylyi (... 295 2e-108
A0A7G2SHA7 Transcriptional regulator [Acinetobacter sp] 291 5e-107
A0A1P8EK09 Transcriptional regulator [Acinetobacter soli] 254 2e-92
A0A0M1I9H1 Transcriptional regulator [Acinetobacter sp. C15] 254 2e-92
A0A3R9CV42 Rrf2 family transcriptional regulator [Acinetobacter s... 241 3e-87
A0A7T9Z846 Rrf2 family transcriptional regulator [Acinetobacter u... 241 3e-87
A0A009YNZ4 Rrf2 family protein [Acinetobacter sp. 479375] 241 3e-87
A0A2N6VEE2 Rrf2 family transcriptional regulator [Acinetobacter u... 241 4e-87
N9C560 Rrf2 family protein [Acinetobacter ursingii ANC 3649] 241 4e-87
D0CCZ1 Transcriptional regulator, Rrf2 family [Acinetobacter baum... 241 4e-87
B0VQR0 Transcriptional regulator [Acinetobacter baumannii (strain... 241 4e-87
A0A6F8TBC5 Uncharacterized protein [Acinetobacter baumannii] 241 5e-87
A0A8B6X1N7 Rrf2 family transcriptional regulator [Derxia gummosa ... 109 4e-35
Q6WRT5 Putative 15.3 kDa negative regulatory protein [Rhodobacter... 92.8 1e-28
O87375 CDG1D [Komagataeibacter xylinus] 89.7 2e-27
Q68YD3 CDG1D [Komagataeibacter xylinus] 88.6 6e-27
Q9AE46 Iron-responsive transcriptional regulator RirA [Rhizobium ... 82.8 2e-24
B7T0V2 NsrR [Moraxella catarrhalis] 74.7 3e-21
D5X843 Transcriptional regulator, BadM/Rrf2 family [Thermincola p... 53.1 3e-13
Q8RQ06 Putative RRF2 protein [Megalodesulfovibrio gigas] 50.8 2e-12
>Q6F7Q5 Putative transcriptional regulator [Acinetobacter baylyi
(strain ATCC 33305 / BD413 / ADP1)]
Length=145
Score = 295 bits (755), Expect = 2e-108
Identities = 144/145 (99%), Positives = 145/145 (100%), Gaps = 0/145 (0%)
Query 1 LLSMQLNKFTDYALRILMYVSRPSETPYTIADIANDLRVSQNHLVKIVHFMGKQGWIITT 60
+LSMQLNKFTDYALRILMYVSRPSETPYTIADIANDLRVSQNHLVKIVHFMGKQGWIITT
Sbjct 1 MLSMQLNKFTDYALRILMYVSRPSETPYTIADIANDLRVSQNHLVKIVHFMGKQGWIITT 60
Query 61 RGKGGGLKLNPKALDLKLGDIVRSLQGDHQIVECHTPPCVLRSHCGLKGILDQALEQFYQ 120
RGKGGGLKLNPKALDLKLGDIVRSLQGDHQIVECHTPPCVLRSHCGLKGILDQALEQFYQ
Sbjct 61 RGKGGGLKLNPKALDLKLGDIVRSLQGDHQIVECHTPPCVLRSHCGLKGILDQALEQFYQ 120
Query 121 SLDQYQLKDVLRAPPTYSPIAFLSL 145
SLDQYQLKDVLRAPPTYSPIAFLSL
Sbjct 121 SLDQYQLKDVLRAPPTYSPIAFLSL 145
>A0A7G2SHA7 Transcriptional regulator [Acinetobacter sp]
Length=142
Score = 291 bits (745), Expect = 5e-107
Identities = 142/142 (100%), Positives = 142/142 (100%), Gaps = 0/142 (0%)
Query 4 MQLNKFTDYALRILMYVSRPSETPYTIADIANDLRVSQNHLVKIVHFMGKQGWIITTRGK 63
MQLNKFTDYALRILMYVSRPSETPYTIADIANDLRVSQNHLVKIVHFMGKQGWIITTRGK
Sbjct 1 MQLNKFTDYALRILMYVSRPSETPYTIADIANDLRVSQNHLVKIVHFMGKQGWIITTRGK 60
Query 64 GGGLKLNPKALDLKLGDIVRSLQGDHQIVECHTPPCVLRSHCGLKGILDQALEQFYQSLD 123
GGGLKLNPKALDLKLGDIVRSLQGDHQIVECHTPPCVLRSHCGLKGILDQALEQFYQSLD
Sbjct 61 GGGLKLNPKALDLKLGDIVRSLQGDHQIVECHTPPCVLRSHCGLKGILDQALEQFYQSLD 120
Query 124 QYQLKDVLRAPPTYSPIAFLSL 145
QYQLKDVLRAPPTYSPIAFLSL
Sbjct 121 QYQLKDVLRAPPTYSPIAFLSL 142
>A0A1P8EK09 Transcriptional regulator [Acinetobacter soli]
Length=142
Score = 254 bits (650), Expect = 2e-92
Identities = 121/142 (85%), Positives = 132/142 (93%), Gaps = 0/142 (0%)
Query 4 MQLNKFTDYALRILMYVSRPSETPYTIADIANDLRVSQNHLVKIVHFMGKQGWIITTRGK 63
MQLNKFTDYALRILMYVSRPSE PYTIADIA DL VSQNHLVK+VHFMGKQ WIITTRGK
Sbjct 1 MQLNKFTDYALRILMYVSRPSEFPYTIADIAKDLHVSQNHLVKVVHFMGKQEWIITTRGK 60
Query 64 GGGLKLNPKALDLKLGDIVRSLQGDHQIVECHTPPCVLRSHCGLKGILDQALEQFYQSLD 123
GGGL+LNPKAL+++LG IVR LQGDHQIVECH PPCV+R+HCGLKGILDQALEQFY SLD
Sbjct 61 GGGLRLNPKALEIRLGHIVRILQGDHQIVECHEPPCVMRAHCGLKGILDQALEQFYVSLD 120
Query 124 QYQLKDVLRAPPTYSPIAFLSL 145
Q+ L+DVL APPTYSPIAF++L
Sbjct 121 QHTLRDVLNAPPTYSPIAFVAL 142
>A0A0M1I9H1 Transcriptional regulator [Acinetobacter sp. C15]
Length=142
Score = 254 bits (650), Expect = 2e-92
Identities = 121/142 (85%), Positives = 132/142 (93%), Gaps = 0/142 (0%)
Query 4 MQLNKFTDYALRILMYVSRPSETPYTIADIANDLRVSQNHLVKIVHFMGKQGWIITTRGK 63
MQLNKFTDYALRILMYVSRPSE PYTIADIA DL VSQNHLVK+VHFMGKQ WIITTRGK
Sbjct 1 MQLNKFTDYALRILMYVSRPSEFPYTIADIAKDLHVSQNHLVKVVHFMGKQEWIITTRGK 60
Query 64 GGGLKLNPKALDLKLGDIVRSLQGDHQIVECHTPPCVLRSHCGLKGILDQALEQFYQSLD 123
GGGL+LNPKAL+++LG IVR LQGDHQIVECH PPCV+R+HCGLKGILDQALEQFY SLD
Sbjct 61 GGGLRLNPKALEIRLGHIVRILQGDHQIVECHEPPCVMRAHCGLKGILDQALEQFYVSLD 120
Query 124 QYQLKDVLRAPPTYSPIAFLSL 145
Q+ L+DVL APPTYSPIAF++L
Sbjct 121 QHTLRDVLNAPPTYSPIAFVAL 142
>A0A3R9CV42 Rrf2 family transcriptional regulator [Acinetobacter
sp. FDAARGOS_515]
Length=146
Score = 241 bits (616), Expect = 3e-87
Identities = 119/145 (82%), Positives = 128/145 (88%), Gaps = 3/145 (2%)
Query 4 MQLNKFTDYALRILMYVSRPSETPYTIADIANDLRVSQNHLVKIVHFMGKQGWIITTRGK 63
MQLNKFTDYALRILMYVSRPSE PYTIA+IA DL VSQNHLVKIVHFM KQ WIITTRGK
Sbjct 1 MQLNKFTDYALRILMYVSRPSEMPYTIAEIARDLHVSQNHLVKIVHFMAKQEWIITTRGK 60
Query 64 GGGLKLNPKALDLKLGDIVRSLQGDHQIVECHTPPCVLRSHCGLKGILDQALEQFYQSLD 123
GGGL+LNPKALDL LG IVR LQGDHQIVEC+TPPCVLR+HCGLKGILD ALE FYQ+LD
Sbjct 61 GGGLRLNPKALDLTLGKIVRILQGDHQIVECNTPPCVLRAHCGLKGILDDALESFYQTLD 120
Query 124 QYQLKDVLRAPP---TYSPIAFLSL 145
QY L DVL APP ++SPI F+S+
Sbjct 121 QYSLADVLAAPPSASSHSPIEFISI 145
>A0A7T9Z846 Rrf2 family transcriptional regulator [Acinetobacter
ursingii]
Length=146
Score = 241 bits (616), Expect = 3e-87
Identities = 120/145 (83%), Positives = 128/145 (88%), Gaps = 3/145 (2%)
Query 4 MQLNKFTDYALRILMYVSRPSETPYTIADIANDLRVSQNHLVKIVHFMGKQGWIITTRGK 63
MQLNKFTDYALRILMYVSRPSE PYTIA+IA DL VSQNHLVKIVHFM KQ WIITTRGK
Sbjct 1 MQLNKFTDYALRILMYVSRPSEMPYTIAEIAADLHVSQNHLVKIVHFMAKQEWIITTRGK 60
Query 64 GGGLKLNPKALDLKLGDIVRSLQGDHQIVECHTPPCVLRSHCGLKGILDQALEQFYQSLD 123
GGGL+LNPKALDL LG IVR LQGDHQIVEC+TPPCVLRSHCGLKGILD ALE FYQ+LD
Sbjct 61 GGGLRLNPKALDLTLGKIVRILQGDHQIVECNTPPCVLRSHCGLKGILDDALESFYQTLD 120
Query 124 QYQLKDVLRAPP---TYSPIAFLSL 145
QY L DVL APP ++SPI F+S+
Sbjct 121 QYTLADVLAAPPSTSSHSPIEFISI 145
>A0A009YNZ4 Rrf2 family protein [Acinetobacter sp. 479375]
Length=146
Score = 241 bits (616), Expect = 3e-87
Identities = 120/145 (83%), Positives = 128/145 (88%), Gaps = 3/145 (2%)
Query 4 MQLNKFTDYALRILMYVSRPSETPYTIADIANDLRVSQNHLVKIVHFMGKQGWIITTRGK 63
MQLNKFTDYALRILMYVSRPSE PYTIA+IA DL VSQNHLVKIVHFM KQ WIITTRGK
Sbjct 1 MQLNKFTDYALRILMYVSRPSEMPYTIAEIAADLHVSQNHLVKIVHFMAKQEWIITTRGK 60
Query 64 GGGLKLNPKALDLKLGDIVRSLQGDHQIVECHTPPCVLRSHCGLKGILDQALEQFYQSLD 123
GGGL+LNPKALDL LG IVR LQGDHQIVEC+TPPCVLRSHCGLKGILD ALE FYQ+LD
Sbjct 61 GGGLRLNPKALDLTLGKIVRILQGDHQIVECNTPPCVLRSHCGLKGILDDALESFYQTLD 120
Query 124 QYQLKDVLRAPP---TYSPIAFLSL 145
QY L DVL APP ++SPI F+S+
Sbjct 121 QYTLADVLAAPPSTSSHSPIEFISI 145
>A0A2N6VEE2 Rrf2 family transcriptional regulator [Acinetobacter
ursingii]
Length=146
Score = 241 bits (615), Expect = 4e-87
Identities = 120/145 (83%), Positives = 128/145 (88%), Gaps = 3/145 (2%)
Query 4 MQLNKFTDYALRILMYVSRPSETPYTIADIANDLRVSQNHLVKIVHFMGKQGWIITTRGK 63
MQLNKFTDYALRILMYVSRPSE PYTIA+IA DL VSQNHLVKIVHFM KQ WIITTRGK
Sbjct 1 MQLNKFTDYALRILMYVSRPSEMPYTIAEIARDLHVSQNHLVKIVHFMAKQEWIITTRGK 60
Query 64 GGGLKLNPKALDLKLGDIVRSLQGDHQIVECHTPPCVLRSHCGLKGILDQALEQFYQSLD 123
GGGL+LNPKALDL LG IVR LQGDHQIVEC+TPPCVLRSHCGLKGILD ALE FYQ+LD
Sbjct 61 GGGLRLNPKALDLTLGKIVRILQGDHQIVECNTPPCVLRSHCGLKGILDDALESFYQTLD 120
Query 124 QYQLKDVLRAPP---TYSPIAFLSL 145
QY L DVL APP ++S IAF+S+
Sbjct 121 QYTLADVLAAPPSTSSHSAIAFISI 145
>N9C560 Rrf2 family protein [Acinetobacter ursingii ANC 3649]
Length=146
Score = 241 bits (615), Expect = 4e-87
Identities = 120/145 (83%), Positives = 128/145 (88%), Gaps = 3/145 (2%)
Query 4 MQLNKFTDYALRILMYVSRPSETPYTIADIANDLRVSQNHLVKIVHFMGKQGWIITTRGK 63
MQLNKFTDYALRILMYVSRPSE PYTIA+IA DL VSQNHLVKIVHFM KQ WIITTRGK
Sbjct 1 MQLNKFTDYALRILMYVSRPSEMPYTIAEIARDLHVSQNHLVKIVHFMAKQEWIITTRGK 60
Query 64 GGGLKLNPKALDLKLGDIVRSLQGDHQIVECHTPPCVLRSHCGLKGILDQALEQFYQSLD 123
GGGL+LNPKALDL LG IVR LQGDHQIVEC+TPPCVLRSHCGLKGILD ALE FYQ+LD
Sbjct 61 GGGLRLNPKALDLTLGKIVRILQGDHQIVECNTPPCVLRSHCGLKGILDDALESFYQTLD 120
Query 124 QYQLKDVLRAPP---TYSPIAFLSL 145
QY L DVL APP ++S IAF+S+
Sbjct 121 QYTLADVLAAPPSTSSHSAIAFISI 145
>D0CCZ1 Transcriptional regulator, Rrf2 family [Acinetobacter
baumannii (strain ATCC 19606 / DSM 30007 / JCM 6841 / CCUG 19606
/ CIP 70.34 / NBRC 109757 / NCIMB 12457 / NCTC 12156 /
81)]
Length=148
Score = 241 bits (615), Expect = 4e-87
Identities = 118/148 (80%), Positives = 132/148 (89%), Gaps = 3/148 (2%)
Query 1 LLSMQLNKFTDYALRILMYVSRPSETPYTIADIANDLRVSQNHLVKIVHFMGKQGWIITT 60
++ MQLNKFTDYALRILMYV+RPS+TPYTIA+IA DL VSQNHLVK+VHFMGKQ WIIT
Sbjct 1 MVIMQLNKFTDYALRILMYVARPSDTPYTIAEIAQDLYVSQNHLVKVVHFMGKQEWIITI 60
Query 61 RGKGGGLKLNPKALDLKLGDIVRSLQGDHQIVECHTPPCVLRSHCGLKGILDQALEQFYQ 120
RGKGGG++LNPKALDLKLG IVR LQGDHQIVEC+TPPCVLRSHCGLKGILDQALE FYQ
Sbjct 61 RGKGGGIRLNPKALDLKLGTIVRILQGDHQIVECNTPPCVLRSHCGLKGILDQALESFYQ 120
Query 121 SLDQYQLKDVLRAPPT---YSPIAFLSL 145
SLDQY L +VL+ P + +SPIAFL +
Sbjct 121 SLDQYTLGEVLQQPKSASDHSPIAFLQI 148
>B0VQR0 Transcriptional regulator [Acinetobacter baumannii (strain
SDF)]
Length=148
Score = 241 bits (615), Expect = 4e-87
Identities = 118/148 (80%), Positives = 131/148 (89%), Gaps = 3/148 (2%)
Query 1 LLSMQLNKFTDYALRILMYVSRPSETPYTIADIANDLRVSQNHLVKIVHFMGKQGWIITT 60
++ MQLNKFTDYALRILMYV+RPS+ PYTIA+IA DL VSQNHLVK+VHFMGKQGWIIT
Sbjct 1 MVIMQLNKFTDYALRILMYVARPSDAPYTIAEIAQDLYVSQNHLVKVVHFMGKQGWIITI 60
Query 61 RGKGGGLKLNPKALDLKLGDIVRSLQGDHQIVECHTPPCVLRSHCGLKGILDQALEQFYQ 120
RG GGG++LNPKALDLKLG IVR LQGDHQIVEC+TPPCVLRSHCGLKGILDQALE FYQ
Sbjct 61 RGNGGGIRLNPKALDLKLGTIVRILQGDHQIVECNTPPCVLRSHCGLKGILDQALESFYQ 120
Query 121 SLDQYQLKDVLRAPPT---YSPIAFLSL 145
SLDQY L +VL+ P + +SPIAFL L
Sbjct 121 SLDQYTLGEVLQQPKSASDHSPIAFLQL 148
>A0A6F8TBC5 Uncharacterized protein [Acinetobacter baumannii]
Length=145
Score = 241 bits (614), Expect = 5e-87
Identities = 118/145 (81%), Positives = 130/145 (90%), Gaps = 3/145 (2%)
Query 4 MQLNKFTDYALRILMYVSRPSETPYTIADIANDLRVSQNHLVKIVHFMGKQGWIITTRGK 63
MQLNKFTDYALRILMYV+RPS+TPYTIA+IA DL VSQNHLVK+VHFMGKQ WIIT RGK
Sbjct 1 MQLNKFTDYALRILMYVARPSDTPYTIAEIAQDLYVSQNHLVKVVHFMGKQEWIITIRGK 60
Query 64 GGGLKLNPKALDLKLGDIVRSLQGDHQIVECHTPPCVLRSHCGLKGILDQALEQFYQSLD 123
GGG++LNPKALDLKLG IVR LQGDHQIVEC+TPPCVLRSHCGLKGILDQALE FYQSLD
Sbjct 61 GGGIRLNPKALDLKLGTIVRILQGDHQIVECNTPPCVLRSHCGLKGILDQALESFYQSLD 120
Query 124 QYQLKDVLRAPPT---YSPIAFLSL 145
QY L +VL+ P + +SPIAFL +
Sbjct 121 QYTLGEVLQQPKSASDHSPIAFLQI 145
>A0A8B6X1N7 Rrf2 family transcriptional regulator [Derxia gummosa
DSM 723]
Length=151
Score = 109 bits (273), Expect = 4e-35
Identities = 54/142 (38%), Positives = 86/142 (61%), Gaps = 3/142 (2%)
Query 4 MQLNKFTDYALRILMYVSRPSETPYTIADIANDLRVSQNHLVKIVHFMGKQGWIITTRGK 63
M+L FTDY++R+L+Y++ TIA+IA VS+NHL+K+VH + + GWI + RGK
Sbjct 1 MKLTNFTDYSIRVLIYLATDPLRRATIAEIATAFGVSENHLMKVVHHLARHGWITSVRGK 60
Query 64 GGGLKLNPKALDLKLGDIVRSLQGDHQIVECH---TPPCVLRSHCGLKGILDQALEQFYQ 120
GGGL+L + + +G+++RS +G EC + C + CG++ + +A+E FY
Sbjct 61 GGGLELTWEPSSIVVGELIRSTEGAPLPAECFDKASNTCPIIKACGMRDVFGEAVEAFYA 120
Query 121 SLDQYQLKDVLRAPPTYSPIAF 142
LD+Y L D++ S I F
Sbjct 121 VLDKYTLADLMDKRSKISKILF 142
>Q6WRT5 Putative 15.3 kDa negative regulatory protein [Rhodobacter
capsulatus]
Length=140
Score = 92.8 bits (229), Expect = 1e-28
Identities = 51/138 (37%), Positives = 76/138 (55%), Gaps = 2/138 (1%)
Query 4 MQLNKFTDYALRILMYVSRPSETPYTIADIANDLRVSQNHLVKIVHFMGKQGWIITTRGK 63
M L TD+ALR L++++ E ++ DL +S+NHL K+V + G+ T +G
Sbjct 1 MHLLASTDFALRALLFLATDPERLVNTETMSRDLGISRNHLQKVVQALVAGGFARTIKGP 60
Query 64 GGGLKLNPKALDLKLGDIVRSLQGDHQIVECHTP--PCVLRSHCGLKGILDQALEQFYQS 121
GG++L A ++++G +VR + IV C P CV+ CGLKG+L A Q+Y
Sbjct 61 RGGVRLAHPATEIRIGAVVRHFEEHQPIVACFAPEGQCVIEPICGLKGVLAGAQSQYYDF 120
Query 122 LDQYQLKDVLRAPPTYSP 139
L+ Y L D LR P SP
Sbjct 121 LNGYTLADCLRRPRFLSP 138
>O87375 CDG1D [Komagataeibacter xylinus]
Length=138
Score = 89.7 bits (221), Expect = 2e-27
Identities = 49/135 (36%), Positives = 78/135 (58%), Gaps = 4/135 (3%)
Query 4 MQLNKFTDYALRILMYVSRPSETPYTIADIANDLRVSQNHLVKIVHFMGKQGWIITTRGK 63
M+L +TDY++R L+Y+ + I +IA R+SQNHLVK+V+ + G I+ RG+
Sbjct 1 MRLTLYTDYSIRTLIYLGQNPGRRVAIQEIAATHRISQNHLVKVVNRLSSNGVILARRGR 60
Query 64 GGGLKLNPKALDLKLGDIVRSLQGD-HQIVECHT---PPCVLRSHCGLKGILDQALEQFY 119
GGL+L + +GDI+R ++ D +IV C+ CVL C L+G+ +++ F
Sbjct 61 SGGLELAGAPHQIIIGDIIRLMEADMGKIVSCNPENGQACVLADACRLQGLFAKSVNAFM 120
Query 120 QSLDQYQLKDVLRAP 134
LD+ L D+L P
Sbjct 121 SVLDRITLHDILHEP 135
>Q68YD3 CDG1D [Komagataeibacter xylinus]
Length=138
Score = 88.6 bits (218), Expect = 6e-27
Identities = 48/135 (36%), Positives = 77/135 (57%), Gaps = 4/135 (3%)
Query 4 MQLNKFTDYALRILMYVSRPSETPYTIADIANDLRVSQNHLVKIVHFMGKQGWIITTRGK 63
M+L +TDY++R L+Y+ + I +IA +SQNHLVK+V+ + G I+ RG+
Sbjct 1 MRLTLYTDYSIRTLIYLGQNPGRRVAIQEIAQTHSISQNHLVKVVNRLSSNGVILARRGR 60
Query 64 GGGLKLNPKALDLKLGDIVRSLQGD-HQIVECHT---PPCVLRSHCGLKGILDQALEQFY 119
GGL+L + +GDI+R ++ D +IV C+ CVL C L+G+ +++ F
Sbjct 61 SGGLELAGAPHQIIIGDIIRLMEADMGKIVSCNPENGQACVLADACRLRGLFAKSVNAFL 120
Query 120 QSLDQYQLKDVLRAP 134
LD+ L D+L P
Sbjct 121 SVLDRITLHDILHEP 135
>Q9AE46 Iron-responsive transcriptional regulator RirA [Rhizobium
leguminosarum bv. viciae]
Length=160
Score = 82.8 bits (203), Expect = 2e-24
Identities = 48/136 (35%), Positives = 72/136 (53%), Gaps = 4/136 (3%)
Query 4 MQLNKFTDYALRILMYVSRPSETPYTIADIANDLRVSQNHLVKIVHFMGKQGWIITTRGK 63
M+L K T+YA+R+LMY + I +IA VS+ L KI+ + K G + T RG+
Sbjct 1 MRLTKQTNYAVRMLMYCAANDGHLSRIPEIAKAYGVSELFLFKILQPLNKAGLVETVRGR 60
Query 64 GGGLKLNPKALDLKLGDIVRSLQGDHQIVECHTP----PCVLRSHCGLKGILDQALEQFY 119
GG++L A D+ L D+VR + + EC C L CGL L +AL F+
Sbjct 61 NGGVRLGKPAADISLFDVVRVTEDSFAMAECFEDDGEVECPLVDSCGLNSALRKALNAFF 120
Query 120 QSLDQYQLKDVLRAPP 135
L +Y + D+++A P
Sbjct 121 AVLSEYSIDDLVKARP 136
>B7T0V2 NsrR [Moraxella catarrhalis]
Length=177
Score = 74.7 bits (182), Expect = 3e-21
Identities = 45/162 (28%), Positives = 77/162 (48%), Gaps = 34/162 (21%)
Query 4 MQLNKFTDYALRILMYVSR--PSETPYTIADIANDLRVSQNHLVKIVHFMGKQGWIITTR 61
M+L +++D+ALR+L+Y++ ++ I DIA +S+NHL K++H + K + + R
Sbjct 1 MRLTQYSDFALRVLIYLATIPNNDELVRIDDIAKSYGISKNHLTKVIHQLSKLKVVDSAR 60
Query 62 GKGGGLKLNPKALDLKLGDIVRSLQGDHQIVECHTP------------------------ 97
GK GG++L ++ +G+IVR + D +V C
Sbjct 61 GKNGGIRLAMHPKNINVGNIVRQTEPDFFVVACFADEPAQDDLMTDNLMTNDLRKIKTLD 120
Query 98 --------PCVLRSHCGLKGILDQALEQFYQSLDQYQLKDVL 131
CV+ C LK + +A + F Q LD Y L D++
Sbjct 121 LSVGQPAMSCVISPACHLKQVFAEATKAFLQVLDSYTLADII 162
Score = 16.2 bits (30), Expect = 3.9
Identities = 8/14 (57%), Positives = 11/14 (79%), Gaps = 3/14 (21%)
Query 28 YTIADI---ANDLR 38
YT+ADI A++LR
Sbjct 156 YTLADIISNADELR 169
>D5X843 Transcriptional regulator, BadM/Rrf2 family [Thermincola
potens (strain JR)]
Length=149
Score = 53.1 bits (126), Expect = 3e-13
Identities = 32/112 (29%), Positives = 57/112 (51%), Gaps = 4/112 (4%)
Query 25 ETPYTIADIANDLRVSQNHLVKIVHFMGKQGWIITTRGKGGGLKLNPKALDLKLGDIVRS 84
E P ++ IA +S+ +L +++ + K G + + RG GG L + D+K+GDI+R
Sbjct 23 EGPVSLKSIAERQGLSEPYLEQLIAVLRKAGLVKSVRGAQGGYILAREPRDIKVGDIIRV 82
Query 85 LQGDHQIVECHTPP----CVLRSHCGLKGILDQALEQFYQSLDQYQLKDVLR 132
L+G VEC + C+ C K + ++ + + LD L D+L+
Sbjct 83 LEGPIAPVECVSQDDPEHCLKFDFCVTKSVWEKVKKSIEEVLDSITLADMLK 134
>Q8RQ06 Putative RRF2 protein [Megalodesulfovibrio gigas]
Length=150
Score = 50.8 bits (120), Expect = 2e-12
Identities = 33/132 (25%), Positives = 66/132 (50%), Gaps = 3/132 (2%)
Query 4 MQLNKFTDYALRILMYVSRPSET-PYTIADIANDLRVSQNHLVKIVHFMGKQGWIITTRG 62
M+L+ + Y R+++ ++ S+ P I+DI+ VS +L K++ + + G+I + RG
Sbjct 1 MKLSTRSRYGTRMVLDIAMHSQAGPVRISDISKRQGVSVKYLEKLIRPLKQAGFIKSKRG 60
Query 63 KGGGLKLNPKALDLKLGDIVRSLQGDHQIVEC--HTPPCVLRSHCGLKGILDQALEQFYQ 120
GG L+ + +G +VR+++G+ + EC C + C + + +A
Sbjct 61 PRGGHVLSDLPERIAVGAVVRAMEGEMALTECAKDASVCPISGDCLTRKVWIEATRAMLD 120
Query 121 SLDQYQLKDVLR 132
LD D++R
Sbjct 121 RLDAITFLDLMR 132
Lambda K H a alpha
0.327 0.143 0.437 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 249195
Database: 32d2e9c6ece17a1a617dc082fa489e2d.TrEMBL.fasta
Posted date: May 20, 2024 3:52 PM
Number of letters in database: 2,945
Number of sequences in database: 20
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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