BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 93e64f3cfa3cb9b9c442aecd322bc03f.SwissProt.fasta
11 sequences; 3,202 total letters
Query= ACIAD3225
Length=300
Score E
Sequences producing significant alignments: (Bits) Value
P77559 Uncharacterized HTH-type transcriptional regulator YnfL [E... 109 2e-31
O68014 HTH-type transcriptional regulator BenM [Acinetobacter bay... 103 2e-29
O33945 Probable cat1 operon transcriptional activator [Acinetobac... 102 7e-29
P07774 HTH-type transcriptional regulator CatM [Acinetobacter bay... 101 2e-28
Q05840 HTH-type transcriptional regulator ClcR [Pseudomonas putida] 97.4 4e-27
P20667 HTH-type transcriptional regulator CatR [Pseudomonas putida] 97.1 5e-27
P20668 Transcriptional dual regulator GltC [Bacillus subtilis (st... 86.7 4e-23
P42427 HTH-type transcriptional regulator TfdT [Cupriavidus pinat... 83.2 2e-22
P27102 HTH-type transcriptional regulator TcbR [Pseudomonas sp. (... 83.2 6e-22
Q46M54 HTH-type transcriptional regulator TfdS [Cupriavidus pinat... 80.1 7e-21
Q46M57 HTH-type transcriptional regulator TdfR [Cupriavidus pinat... 79.7 1e-20
>P77559 Uncharacterized HTH-type transcriptional regulator YnfL
[Escherichia coli (strain K12)]
Length=297
Score = 109 bits (272), Expect = 2e-31
Identities = 79/278 (28%), Positives = 131/278 (47%), Gaps = 9/278 (3%)
Query 4 LKQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTTAGD 63
L+ RYFV + E F A+ +L I+Q LS+Q+ LE ++G + R+ + + LT AG
Sbjct 5 LRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQIGARLLARTNRSVLLTAAGK 64
Query 64 QFYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSS---VILNQDKLKLFKQLCIEY- 119
QF D ++ LS + + A+ L +G+ RI +SS + D L LF++ +Y
Sbjct 65 QFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSSAPFIRAVSDTLSLFRR---DYP 121
Query 120 QIEIEIETLASELQVEAIENGSLDIGFIRPPVLASLEHLNHQTVYSSKLCVAVCMEQPAL 179
+ ++ + + Q+ + G+LD+G +R L E L H + L + + P
Sbjct 122 DVHLQTREMNTREQIAPLIEGTLDMGLLRNTALP--ESLEHAVIVHEPLMAMIPHDHPLA 179
Query 180 NQQKVKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQN 239
N V L++L PFV GL L + +P +T + LVS
Sbjct 180 NNPNVTLAELAKEPFVFFDPHVGTGLYDDILGLMRRYHLTPVITQEVGEAMTIIGLVSAG 239
Query 240 LGICIVPQDFESVLPNNVRLIELDHESRFSPVVLLWKK 277
LG+ I+P F+ V N +R + + E S + L+W K
Sbjct 240 LGVSILPASFKRVQLNEMRWVPIAEEDAVSEMWLVWPK 277
>O68014 HTH-type transcriptional regulator BenM [Acinetobacter
baylyi (strain ATCC 33305 / BD413 / ADP1)]
Length=304
Score = 103 bits (258), Expect = 2e-29
Identities = 85/297 (29%), Positives = 138/297 (46%), Gaps = 11/297 (4%)
Query 4 LKQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTTAGD 63
L+ RYFV +VE SF A+++L IAQ LSRQ+ LE+ELG + +R + +K T G
Sbjct 3 LRHLRYFVAVVEEQSFTKAADKLCIAQPPLSRQIQNLEEELGIQLLERGSRPVKTTPEGH 62
Query 64 QFYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVI--LNQDKLKLFKQLCIEYQI 121
FY+ K LS + + + +A + + RI S++ L + L++Q +
Sbjct 63 FFYQYAIKLLSNVDQMVSMTKRIASVE-KTIRIGFVGSLLFGLLPRIIHLYRQ--AHPNL 119
Query 122 EIEIETLASELQVEAIENGSLDIGFIRPPVLASLEHLNHQTVYSSKLCVAVCMEQPALNQ 181
IE+ + ++ Q EA++ G +D GF R + S + + + +L VAV P LNQ
Sbjct 120 RIELYEMGTKAQTEALKEGRIDAGFGRLKI--SDPAIKRTLLRNERLMVAVHASHP-LNQ 176
Query 182 QK---VKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQ 238
K V L+DL D + P S + S N+ HG P L LV+
Sbjct 177 MKDKGVHLNDLIDEKILLYPSSPKPNFSTHVMNIFSDHGLEPTKINEVREVQLALGLVAA 236
Query 239 NLGICIVPQDFESVLPNNVRLIELDHESRFSPVVLLWKKETDSLLQCCVEEIFKSFY 295
GI +VP +S+ N+ + L +P+ + + +S + E + Y
Sbjct 237 GEGISLVPASTQSIQLFNLSYVPLLDPDAITPIYIAVRNMEESTYIYSLYETIRQIY 293
>O33945 Probable cat1 operon transcriptional activator [Acinetobacter
lwoffii]
Length=303
Score = 102 bits (254), Expect = 7e-29
Identities = 75/293 (26%), Positives = 136/293 (46%), Gaps = 4/293 (1%)
Query 4 LKQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTTAGD 63
L+QFRYFV + +F A+ QL IAQ LSRQ+ LLE+E+G + R+ + ++LT AG
Sbjct 3 LRQFRYFVAVARERNFTRAARQLNIAQPPLSRQIQLLEEEVGVPLLIRNSRPVQLTDAGR 62
Query 64 QFYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVILNQDKLKLFKQLCIEYQIEI 123
F+ + L ++ + + + + + I +S + + K +++I
Sbjct 63 LFFEQAIQVLGRVEQMQAATRRVGLHQRSVLSIGFVASTLYGVLPTLMRKLRQHAPELDI 122
Query 124 EIETLASELQVEAIENGSLDIGFIRPPVLASLEHLNHQTVYSSKLCVAVCMEQP-ALNQQ 182
++ L S Q++AI G +DIGF R V S +++ ++ +L VA+ ME P A
Sbjct 123 QMVELMSVQQIQAINEGRIDIGFGR--VHHSDPNVSSIVLHEERLAVALPMESPMAREST 180
Query 183 KVKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQNLGI 242
+ + L + P R G + N+ H P + T L LV+ G+
Sbjct 181 PLPVHQLAGEKLIVYPKEPRPGFADQVLNILDRHDVQPGQVMEVREIQTALGLVAAEFGV 240
Query 243 CIVPQDFESVLPNNVRLIELDHESRFSPVVLLWKKETDSLLQCCVEEIFKSFY 295
C++P + ++V +D + SPV++ + S +++ + Y
Sbjct 241 CVIPASARQ-MRHDVHYRLIDGDRATSPVIVSHRANDSSKYISLTKQLIREMY 292
>P07774 HTH-type transcriptional regulator CatM [Acinetobacter
baylyi (strain ATCC 33305 / BD413 / ADP1)]
Length=303
Score = 101 bits (251), Expect = 2e-28
Identities = 89/302 (29%), Positives = 148/302 (49%), Gaps = 17/302 (6%)
Query 4 LKQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTTAGD 63
L+ RYFVT+VE S A+E+L IAQ LSRQ+ LE+ELG +F+R + K+T AG
Sbjct 3 LRHLRYFVTVVEEQSISKAAEKLCIAQPPLSRQIQKLEEELGIQLFERGFRPAKVTEAGM 62
Query 64 QFYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVI--LNQDKLKLFKQLCIEYQI 121
FY+ + L+ A+ +A + RI + SS++ L + + LF+Q +I
Sbjct 63 FFYQHAVQILTHTAQASSMAKRIAT-VSQTLRIGYVSSLLYGLLPEIIYLFRQQ--NPEI 119
Query 122 EIEIETLASELQVEAIENGSLDIGFIRPPVLASLEHLNHQTVYSSKLCVAVCMEQPALNQ 181
IE+ ++ Q+ A++ G +D+GF R + + ++ +L +A+ + LNQ
Sbjct 120 HIELIECGTKDQINALKQGKIDLGFGRLKITDPA--IRRIVLHKEQLKLAI-HKHHHLNQ 176
Query 182 ---QKVKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKI-TQLQLVS 237
V LS + D P + P S + + +L G P L R+I L LV+
Sbjct 177 FAATGVHLSQIIDEPMLLYPVSQKPNFATFIQSLFTELGLVPS-KLTEIREIQLALGLVA 235
Query 238 QNLGICIVPQDFESVLPNNVRLIELDHESRFSPVVLLWKKETDS----LLQCCVEEIFKS 293
G+CIVP + N+ I + + +SP+ L + S + CV+E+F +
Sbjct 236 AGEGVCIVPASAMDIGVKNLLYIPILDDDAYSPISLAVRNMDHSNYIPKILACVQEVFAT 295
Query 294 FY 295
+
Sbjct 296 HH 297
>Q05840 HTH-type transcriptional regulator ClcR [Pseudomonas putida]
Length=294
Score = 97.4 bits (241), Expect = 4e-27
Identities = 64/274 (23%), Positives = 133/274 (49%), Gaps = 2/274 (1%)
Query 5 KQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTTAGDQ 64
+Q RYF+ + E G+ AA+ +L I+Q ++RQ+ LE +LG ++F+R+ + ++LT AG
Sbjct 4 RQLRYFIAVAEEGNIGAAARRLHISQPPITRQIQALEQDLGVVLFERTHRGVELTAAGTT 63
Query 65 FYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVILNQDKLKLFKQLCIEYQIEIE 124
F D ++ L + + + ++ ++G+ R+A+ +V+L+ L L + L + +
Sbjct 64 FLEDARRLLHVTEISRVRSRAASRGEIGELRVAYFGTVVLHTLPLLLRQLLSVAPSATVS 123
Query 125 IETLASELQVEAIENGSLDIGFIRPPVLASLEHLNHQTVYSSKLCVAVCMEQPALNQQKV 184
+ ++ Q+EA++ G++DIGF R E + + V + +L + + ++V
Sbjct 124 LTQMSKNRQIEALDAGTIDIGFGR--FYPYQEGVVVRNVTNERLFLGAQKSRARSFGEQV 181
Query 185 KLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQNLGICI 244
S L++ PF+ P R + + + P+ I + L +G+ I
Sbjct 182 HCSALRNEPFILFPREGRPSFADEVIGVFKNARVEPKVVAIVEDVNAAMALALAGVGVTI 241
Query 245 VPQDFESVLPNNVRLIELDHESRFSPVVLLWKKE 278
VP+ + + EL PV +++ +
Sbjct 242 VPETVAMISWPDFGFTELVGSKATVPVSCIYRHD 275
>P20667 HTH-type transcriptional regulator CatR [Pseudomonas putida]
Length=289
Score = 97.1 bits (240), Expect = 5e-27
Identities = 80/285 (28%), Positives = 138/285 (48%), Gaps = 7/285 (2%)
Query 4 LKQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTTAGD 63
L+ RYF + ET +F A+E L IAQ LSRQ+ LED+LG L+ R E+ ++LT AG
Sbjct 3 LRHLRYFKVLAETLNFTRAAELLHIAQPPLSRQISQLEDQLGTLLVVR-ERPLRLTEAGR 61
Query 64 QFYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVILNQDKLKLFKQLCIEYQIEI 123
FY L LQN + + + +G+ + I + S L + +L ++L + ++E+
Sbjct 62 FFYEQSCTVLQ-LQNISDNTRRIGQGQRQWLGIGFAPST-LYKVLPELIRELRQDSELEL 119
Query 124 EIETLASELQVEAIENGSLDIGFIRPPVLASLEHLNHQTVYSSKLCVAVCMEQPALNQQK 183
+ + + QVEA+++G +DI F R + + HQ V VAV + L
Sbjct 120 GLNEMTTLQQVEALKSGRIDIAFGR---IRIDDPAIHQQVLCEDPLVAVLPKDHPLASSP 176
Query 184 VKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQNLGIC 243
+ L+ L F+ P + R + L HG S + + T + LV+ +G+
Sbjct 177 LTLAQLAGEAFILYPANPRPSYADHVLALFAHHGMSIHVSQWANELQTAIGLVAVGVGVT 236
Query 244 IVPQDFESVLPNNVRLIELDHESRFSPVVLLWKK-ETDSLLQCCV 287
+VP + ++ + L SP++L +K + ++Q C+
Sbjct 237 LVPASVQQQHRTDIEYVSLLDSGAVSPIILSRRKGDVSPIVQRCL 281
>P20668 Transcriptional dual regulator GltC [Bacillus subtilis
(strain 168)]
Length=300
Score = 86.7 bits (213), Expect = 4e-23
Identities = 65/247 (26%), Positives = 116/247 (47%), Gaps = 9/247 (4%)
Query 4 LKQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTTAGD 63
L+Q RYF+ + E A++ L +AQSA+SRQ+ LE+EL +F+R + IKLT G
Sbjct 3 LRQLRYFMEVAEREHVSEAADHLHVAQSAISRQIANLEEELNVTLFEREGRNIKLTPIGK 62
Query 64 QFYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVI--LNQDKLKLFKQLCIEY-Q 120
+F +K + A+ +I +S+ L + FK+ EY
Sbjct 63 EFLIHVKTAMKAIDYAKEQIDEYLDPHRGTVKIGFPTSLASQLLPTVISAFKE---EYPH 119
Query 121 IEIEIETLASELQVEAIENGSLDIGFIRPPVLASLEHLNHQTVYSSKLCVAVCMEQPALN 180
+E + + + +EA+ N +D+ + PV + + + +++ K+ V + P
Sbjct 120 VEFLLRQGSYKFLIEAVRNRDIDLALL-GPVPTNFSDITGKILFTEKIYALVPLNHPLAK 178
Query 181 QQKVKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQNL 240
Q+ V L DL++ FV P + L +A + C GF+P + LVS +
Sbjct 179 QKTVHLIDLRNDQFVLFP--EGFVLREMAIDTCKQAGFAPLVSTEGEDLDAIKGLVSAGM 236
Query 241 GICIVPQ 247
G+ ++P+
Sbjct 237 GVTLLPE 243
>P42427 HTH-type transcriptional regulator TfdT [Cupriavidus pinatubonensis
(strain JMP 134 / LMG 1197)]
Length=228
Score = 83.2 bits (204), Expect = 2e-22
Identities = 52/200 (26%), Positives = 100/200 (50%), Gaps = 4/200 (2%)
Query 4 LKQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTTAGD 63
++Q +YFV + E G F A++++ I+Q L+RQ+ LE ++G +F+R+ + ++LT AG
Sbjct 3 IRQLKYFVAVAEAGGFGTAAQRMHISQPPLTRQIQALERDIGAKLFERTARGVELTAAGK 62
Query 64 QFYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVILNQDKLKLFKQLCIEYQIEI 123
F D ++ L+ +Q + +Q A+G+ ++ + + + + L +
Sbjct 63 VFLDDARQLLALVQRSSRRSQAAARGESGELKLVYFGTPVFETVPAFVRTFLATYPDATV 122
Query 124 EIETLASELQVEAIENGSLDIGFIR-PPVLASLEHLNHQTVYSSKLCVAVCMEQPALNQQ 182
+ + E Q+E++ +G +DIGF R PV + N + + L VA +
Sbjct 123 AVSHMTKEAQLESLLSGVVDIGFGRFYPVTEGVSSWN---IGTETLHVAAADPWDTRVSR 179
Query 183 KVKLSDLKDIPFVSMPHSDR 202
+ DL D+P + P DR
Sbjct 180 ARAVVDLLDVPLILYPRGDR 199
>P27102 HTH-type transcriptional regulator TcbR [Pseudomonas sp.
(strain P51)]
Length=294
Score = 83.2 bits (204), Expect = 6e-22
Identities = 70/294 (24%), Positives = 127/294 (43%), Gaps = 5/294 (2%)
Query 5 KQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTTAGDQ 64
+Q +YF+ + E G+ AA+++L ++Q ++RQM LE +LG ++ +RS + I+LT AG
Sbjct 4 RQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHA 63
Query 65 FYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVILNQDKLKLFKQLCIEYQIEIE 124
F D ++ L + ++ A+G +A+ + I L L L +
Sbjct 64 FLEDARRILELAGRSGDRSRAAARGDVGELSVAYFGTPIYRSLPLLLRAFLTSTPTATVS 123
Query 125 IETLASELQVEAIENGSLDIGFIR-PPVLASLEHLNHQTVYSSKLCVAVCMEQPALNQQK 183
+ + + QVE + G++ +GF R P +E +N + L +AV Q +
Sbjct 124 LTHMTKDEQVEGLLAGTIHVGFSRFFPRHPGIEIVN---IAQEDLYLAVHRSQSGKFGKT 180
Query 184 VKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQNLGIC 243
KL+DL+ + P R + L G P+ A + L L
Sbjct 181 CKLADLRAVELTLFPRGGRPSFADEVIGLFKHAGIEPRIARVVEDATAALALTMAGAASS 240
Query 244 IVPQDFESVLPNNVRLIELDHESRFSPVVLLWKKETD-SLLQCCVEEIFKSFYD 296
IVP ++ ++ + P+ ++KE +L VE + +S D
Sbjct 241 IVPASVAAIRWPDIAFARIVGTRVKVPISCTFRKEKQPPILARFVEHVRRSAKD 294
>Q46M54 HTH-type transcriptional regulator TfdS [Cupriavidus pinatubonensis
(strain JMP 134 / LMG 1197)]
Length=295
Score = 80.1 bits (196), Expect = 7e-21
Identities = 68/274 (25%), Positives = 119/274 (43%), Gaps = 8/274 (3%)
Query 5 KQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTTAGDQ 64
+Q RYFV E G+ AA+ +L I+Q ++RQ+ LE LG L+F+RS + ++LT AG
Sbjct 4 RQLRYFVAAAEEGNVGAAARRLHISQPPVTRQIHALEQHLGVLLFERSARGVQLTPAGAA 63
Query 65 FYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVILNQDKLKLFKQLCIEYQIEIE 124
F D ++ L + ++ ++ ++G+ I + + I L +
Sbjct 64 FLEDARRMLELGRTSVDRSRAASRGEIGQLDIGYLGTAIYQTVPALLHAFTQAVPGATLS 123
Query 125 IETLASELQVEAIENGSLDIG---FIRPPVLASLEHLNHQTVYSSKLCVAVCMEQPALNQ 181
+ + Q+EA+ G++ +G F ++EHL+++ +Y +A +
Sbjct 124 LALMPKVRQIEALRAGTIHLGVGRFYPQEPGITVEHLHYERLY-----IAAGSSIARQLR 178
Query 182 QKVKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQNLG 241
Q L LK V P R + L G P+ I L LV+ G
Sbjct 179 QDPTLLRLKSESLVLFPKEGRPSFADEVIALMRRAGVEPRVTAIVEDVNAALGLVAAGAG 238
Query 242 ICIVPQDFESVLPNNVRLIELDHESRFSPVVLLW 275
+ +VP ++ VR +E+ S PV L +
Sbjct 239 VTLVPASVAAIRRPFVRTMEMADASAKVPVSLTY 272
>Q46M57 HTH-type transcriptional regulator TdfR [Cupriavidus pinatubonensis
(strain JMP 134 / LMG 1197)]
Length=295
Score = 79.7 bits (195), Expect = 1e-20
Identities = 68/274 (25%), Positives = 119/274 (43%), Gaps = 8/274 (3%)
Query 5 KQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTTAGDQ 64
+Q RYFV E G+ AA+ +L I+Q ++RQ+ LE LG L+F+RS + ++LT AG
Sbjct 4 RQLRYFVAAAEEGNVGAAARRLHISQPPVTRQIHALEQHLGVLLFERSARGVQLTPAGAA 63
Query 65 FYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVILNQDKLKLFKQLCIEYQIEIE 124
F D ++ L + ++ ++ ++G+ I + + I L +
Sbjct 64 FLEDARRMLELGRTSVDRSRAASRGEIGQLDIGYLGTAIYQTVPALLHAFTQAVPGATLS 123
Query 125 IETLASELQVEAIENGSLDIG---FIRPPVLASLEHLNHQTVYSSKLCVAVCMEQPALNQ 181
+ + Q+EA+ G++ +G F ++EHL+++ +Y +A +
Sbjct 124 LALMPKVRQIEALRAGTIHLGVGRFYPQEPGITVEHLHYERLY-----IAAGSSIARQLR 178
Query 182 QKVKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQNLG 241
Q L LK V P R + L G P+ I L LV+ G
Sbjct 179 QDPTLLRLKSESLVLFPKEGRPSFADEVIALMRRAGVEPRVTAIVEDVNAALGLVAAGAG 238
Query 242 ICIVPQDFESVLPNNVRLIELDHESRFSPVVLLW 275
+ +VP ++ VR +E+ S PV L +
Sbjct 239 VTLVPASVAAIRRPFVRTMEMADASDKVPVSLTY 272
Lambda K H a alpha
0.323 0.137 0.386 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 701353
Database: 93e64f3cfa3cb9b9c442aecd322bc03f.SwissProt.fasta
Posted date: May 20, 2024 7:26 PM
Number of letters in database: 3,202
Number of sequences in database: 11
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
