BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 7ce9a1c6304cec9bc2832890f1832405.TrEMBL.fasta
19 sequences; 5,711 total letters
Query= ACIAD3225
Length=300
Score E
Sequences producing significant alignments: (Bits) Value
Q6F7Q7 Putative transcriptional regulator [Acinetobacter baylyi (... 582 0.0
A0A7G2SH58 LysR family transcriptional regulator [Acinetobacter sp] 580 0.0
N8WEB0 HTH lysR-type domain-containing protein [Acinetobacter viv... 324 1e-114
N9Q2D3 HTH lysR-type domain-containing protein [Acinetobacter cou... 324 1e-114
N9FIV1 HTH lysR-type domain-containing protein [Acinetobacter bei... 323 2e-114
A0A0B0KR67 Transcriptional regulator, LysR family [Acinetobacter ... 323 2e-114
A0A3N4SXJ3 DNA-binding transcriptional LysR family regulator [Aci... 323 2e-114
N9E6K0 HTH lysR-type domain-containing protein [Acinetobacter bei... 323 3e-114
N9NEI4 HTH lysR-type domain-containing protein [Acinetobacter viv... 321 1e-113
Q9Z9Y7 LysR-type regulator [Frateuria sp. ANA-18] 102 9e-29
A7KS58 Putative LysR-type regulatory protein [Alcaligenes sp. NyZ... 100 6e-28
Q9RQ20 LysR family transcriptional regulator [Salmonella typhimur... 100 7e-28
Q93UZ8 TfdT [Caballeronia sp. NK8] 98.6 3e-27
Q51957 CatR [Pseudomonas putida] 98.2 3e-27
Q7WTJ0 Ben and cat operon transcriptional regulator [Acinetobacte... 98.6 4e-27
O50643 SalR [Pseudomonas putida] 98.2 5e-27
Q8GH62 LysR-type transcriptional regulator [Streptomyces griseus] 96.7 1e-26
A0A125R5P0 LysR type regulator [Burkholderia sp. BC1] 96.3 2e-26
O87607 Lys-R type regulatory protein [Pseudomonas aeruginosa] 95.1 5e-26
>Q6F7Q7 Putative transcriptional regulator [Acinetobacter baylyi
(strain ATCC 33305 / BD413 / ADP1)]
Length=299
Score = 582 bits (1499), Expect = 0.0
Identities = 299/299 (100%), Positives = 299/299 (100%), Gaps = 0/299 (0%)
Query 1 MSTLKQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTT 60
MSTLKQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTT
Sbjct 1 MSTLKQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTT 60
Query 61 AGDQFYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVILNQDKLKLFKQLCIEYQ 120
AGDQFYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVILNQDKLKLFKQLCIEYQ
Sbjct 61 AGDQFYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVILNQDKLKLFKQLCIEYQ 120
Query 121 IEIEIETLASELQVEAIENGSLDIGFIRPPVLASLEHLNHQTVYSSKLCVAVCMEQPALN 180
IEIEIETLASELQVEAIENGSLDIGFIRPPVLASLEHLNHQTVYSSKLCVAVCMEQPALN
Sbjct 121 IEIEIETLASELQVEAIENGSLDIGFIRPPVLASLEHLNHQTVYSSKLCVAVCMEQPALN 180
Query 181 QQKVKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQNL 240
QQKVKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQNL
Sbjct 181 QQKVKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQNL 240
Query 241 GICIVPQDFESVLPNNVRLIELDHESRFSPVVLLWKKETDSLLQCCVEEIFKSFYDSKA 299
GICIVPQDFESVLPNNVRLIELDHESRFSPVVLLWKKETDSLLQCCVEEIFKSFYDSKA
Sbjct 241 GICIVPQDFESVLPNNVRLIELDHESRFSPVVLLWKKETDSLLQCCVEEIFKSFYDSKA 299
>A0A7G2SH58 LysR family transcriptional regulator [Acinetobacter
sp]
Length=299
Score = 580 bits (1494), Expect = 0.0
Identities = 298/299 (99%), Positives = 298/299 (99%), Gaps = 0/299 (0%)
Query 1 MSTLKQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTT 60
MSTLKQFRYFVTIVETG FIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTT
Sbjct 1 MSTLKQFRYFVTIVETGRFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTT 60
Query 61 AGDQFYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVILNQDKLKLFKQLCIEYQ 120
AGDQFYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVILNQDKLKLFKQLCIEYQ
Sbjct 61 AGDQFYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVILNQDKLKLFKQLCIEYQ 120
Query 121 IEIEIETLASELQVEAIENGSLDIGFIRPPVLASLEHLNHQTVYSSKLCVAVCMEQPALN 180
IEIEIETLASELQVEAIENGSLDIGFIRPPVLASLEHLNHQTVYSSKLCVAVCMEQPALN
Sbjct 121 IEIEIETLASELQVEAIENGSLDIGFIRPPVLASLEHLNHQTVYSSKLCVAVCMEQPALN 180
Query 181 QQKVKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQNL 240
QQKVKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQNL
Sbjct 181 QQKVKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQNL 240
Query 241 GICIVPQDFESVLPNNVRLIELDHESRFSPVVLLWKKETDSLLQCCVEEIFKSFYDSKA 299
GICIVPQDFESVLPNNVRLIELDHESRFSPVVLLWKKETDSLLQCCVEEIFKSFYDSKA
Sbjct 241 GICIVPQDFESVLPNNVRLIELDHESRFSPVVLLWKKETDSLLQCCVEEIFKSFYDSKA 299
>N8WEB0 HTH lysR-type domain-containing protein [Acinetobacter
vivianii]
Length=298
Score = 324 bits (830), Expect = 1e-114
Identities = 161/299 (54%), Positives = 231/299 (77%), Gaps = 2/299 (1%)
Query 1 MSTLKQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTT 60
M TLKQF Y +TIVETG FIAASE+LFIAQSALSRQ+ LE+ELGF IFDRSEKKIKLTT
Sbjct 1 MWTLKQFNYLITIVETGGFIAASEKLFIAQSALSRQIKNLEEELGFEIFDRSEKKIKLTT 60
Query 61 AGDQFYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVILNQDKLKLFKQLCIEYQ 120
AG+ Y+ +K + L+++I+SAQ++++G+GRI +IAHSSS++L+Q+KL++F+QLC +
Sbjct 61 AGEALYKSLKINIDHLKSSIVSAQSISRGEGRIIKIAHSSSIVLDQNKLEIFEQLCDTHN 120
Query 121 IEIEIETLASELQVEAIENGSLDIGFIRPPVLASLEHLNHQTVYSSKLCVAVCMEQPALN 180
I+IE+ TL+SELQ+E + NGS+D+GFIRPP+ +L +N ++YS+ L VA + P L
Sbjct 121 IDIEMNTLSSELQLEYLLNGSIDLGFIRPPIYHNLNDVNAISLYSAPLYVAAHIADPFLG 180
Query 181 Q-QKVKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQN 239
+ +++ + +L + FVS+PH +RGGLSYLAANLCL +GFSP+ I SRK +QL+LV+
Sbjct 181 EKERISIRELASLDFVSVPHKERGGLSYLAANLCLVNGFSPKRTRIYSRKRSQLELVANG 240
Query 240 LGICIVPQDFESVLPNNVRLIELDHESRFSPVVLLWKKETDSLLQCCVEEIFKSFYDSK 298
GICIVP++F+ +LP+NVRLI + E+ S V L+W+K+ D ++ C + I ++Y S+
Sbjct 241 FGICIVPEEFKVILPSNVRLIPIQDENTLSEVKLIWRKDNDLIVNSCADAI-HAYYSSQ 298
>N9Q2D3 HTH lysR-type domain-containing protein [Acinetobacter
courvalinii]
Length=301
Score = 324 bits (830), Expect = 1e-114
Identities = 161/299 (54%), Positives = 231/299 (77%), Gaps = 2/299 (1%)
Query 1 MSTLKQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTT 60
M TLKQF Y +TIVETG FIAASE+LFIAQSALSRQ+ LE+ELGF IFDRSEKKIKLT
Sbjct 1 MWTLKQFNYLITIVETGGFIAASEKLFIAQSALSRQIKNLEEELGFEIFDRSEKKIKLTV 60
Query 61 AGDQFYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVILNQDKLKLFKQLCIEYQ 120
AG+ Y+ +K + L+++I SAQ++++G+GRI +IAHSSS++L+Q+KL++F+QLC +
Sbjct 61 AGEALYKSLKTNMDHLKSSIASAQSISRGEGRIIKIAHSSSIVLDQNKLEVFEQLCDTHN 120
Query 121 IEIEIETLASELQVEAIENGSLDIGFIRPPVLASLEHLNHQTVYSSKLCVAVCMEQPALN 180
I+IE+ TL+SELQ+E + NGS+D+GFIRPP+ +L+ +N ++Y++ L VA + P L+
Sbjct 121 IDIEMNTLSSELQLEYLLNGSIDLGFIRPPIYHNLDEVNSISLYTAPLYVAAHIADPVLS 180
Query 181 Q-QKVKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQN 239
+ + + + +L + FVS+PH+ RGGLSYLAANLC +GFSP+ I SRK +QL+LV+
Sbjct 181 EKENISIRELALLNFVSVPHNARGGLSYLAANLCQVNGFSPKRTRIYSRKRSQLELVANG 240
Query 240 LGICIVPQDFESVLPNNVRLIELDHESRFSPVVLLWKKETDSLLQCCVEEIFKSFYDSK 298
GICIVP++F+ +LP+NVRLI + E++ S V L+WKK+ D L+ CC I ++Y++K
Sbjct 241 FGICIVPEEFKVILPSNVRLIPIQDENKLSEVKLIWKKDEDLLIDCCAASI-HAYYNAK 298
>N9FIV1 HTH lysR-type domain-containing protein [Acinetobacter
beijerinckii CIP 110307]
Length=303
Score = 323 bits (829), Expect = 2e-114
Identities = 163/299 (55%), Positives = 229/299 (77%), Gaps = 2/299 (1%)
Query 1 MSTLKQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTT 60
M TLKQF Y +TIVETG FIAASE+LFIAQSALSRQ+ LE+ELGF IFDRSEKKIKLT
Sbjct 1 MWTLKQFNYLITIVETGGFIAASEKLFIAQSALSRQIKNLEEELGFDIFDRSEKKIKLTP 60
Query 61 AGDQFYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVILNQDKLKLFKQLCIEYQ 120
AG+ YR +K + L+++I+SAQ++++G+GRI +IAHSSS++L+Q+KL++F+QLC
Sbjct 61 AGEALYRSLKTNIDHLKSSIVSAQSISRGEGRIIKIAHSSSIVLDQNKLEVFEQLCDANM 120
Query 121 IEIEIETLASELQVEAIENGSLDIGFIRPPVLASLEHLNHQTVYSSKLCVAVCMEQPALN 180
I+IE+ TL+SELQ+E + NG++D+GFIRPP+ +L +N ++Y++ L VA P L+
Sbjct 121 IDIEMNTLSSELQLEYLLNGTIDLGFIRPPIYHNLNEVNSISLYTAPLYVAAHSSDPFLS 180
Query 181 Q-QKVKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQN 239
+ + V + +L+ + FVS+PH RGGLSYLAANLCL +GFSP+ I SRK +QL+LV+
Sbjct 181 EKESVSIRELEQLNFVSLPHKGRGGLSYLAANLCLVNGFSPKRTRIYSRKRSQLELVANG 240
Query 240 LGICIVPQDFESVLPNNVRLIELDHESRFSPVVLLWKKETDSLLQCCVEEIFKSFYDSK 298
GICIVP++F+ +LPNNV+LI + E+ S V L+WKKE D ++ C + I + +Y+SK
Sbjct 241 FGICIVPEEFKVILPNNVKLIPIKDENALSEVKLIWKKEQDPVVNRCADSIHR-YYESK 298
>A0A0B0KR67 Transcriptional regulator, LysR family [Acinetobacter
sp. neg1]
Length=298
Score = 323 bits (828), Expect = 2e-114
Identities = 161/299 (54%), Positives = 230/299 (77%), Gaps = 2/299 (1%)
Query 1 MSTLKQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTT 60
M TLKQF Y +TIVETG FIAASE+LFIAQSALSRQ+ LE+ELGF IFDRSEKKIKLTT
Sbjct 1 MWTLKQFNYLITIVETGGFIAASEKLFIAQSALSRQIKNLEEELGFEIFDRSEKKIKLTT 60
Query 61 AGDQFYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVILNQDKLKLFKQLCIEYQ 120
AG+ Y+ +K + L+++I+SAQ++++G+GRI +IAHSSS++L+ +KL++FKQLC +
Sbjct 61 AGEALYKSLKTNIDHLKSSIVSAQSISRGEGRIIKIAHSSSIVLDHNKLEIFKQLCDTHN 120
Query 121 IEIEIETLASELQVEAIENGSLDIGFIRPPVLASLEHLNHQTVYSSKLCVAVCMEQPALN 180
I+IE+ TL+SELQ+E + NGS+D+GFIRPP+ +L +N ++YS+ L VA + P L
Sbjct 121 IDIEMNTLSSELQLEYLLNGSIDLGFIRPPIYHNLNDVNAISLYSAPLYVAAHISDPFLG 180
Query 181 Q-QKVKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQN 239
+ +++ + +L + FVS+PH RGGLSYLAANLCL +GFSP+ + I SRK +QL+LV+
Sbjct 181 EKEQISIRELASLDFVSVPHKARGGLSYLAANLCLVNGFSPKRSRIYSRKRSQLELVANG 240
Query 240 LGICIVPQDFESVLPNNVRLIELDHESRFSPVVLLWKKETDSLLQCCVEEIFKSFYDSK 298
GICIVP++F+ +LP+NVRLI + E+ S V L+W+K+ D ++ C + I ++Y S+
Sbjct 241 FGICIVPEEFKVILPSNVRLIPIQDENTLSEVKLIWRKDNDLIVNSCADAI-HAYYSSQ 298
>A0A3N4SXJ3 DNA-binding transcriptional LysR family regulator
[Acinetobacter sp. BIGb0102]
Length=301
Score = 323 bits (828), Expect = 2e-114
Identities = 160/299 (54%), Positives = 231/299 (77%), Gaps = 2/299 (1%)
Query 1 MSTLKQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTT 60
M TLKQF Y +TIVETG FIAASE+LFIAQSALSRQ+ LE+ELGF IFDRSEKKIKLTT
Sbjct 1 MWTLKQFNYLITIVETGGFIAASEKLFIAQSALSRQIKNLEEELGFEIFDRSEKKIKLTT 60
Query 61 AGDQFYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVILNQDKLKLFKQLCIEYQ 120
AG+ Y+ +K + L+++I+SAQ++++G+GRI +IAHSSS++L+ +KL++FKQLC +
Sbjct 61 AGEALYKSLKTNIDHLKSSIVSAQSISRGEGRIIKIAHSSSIVLDHNKLEIFKQLCDTHN 120
Query 121 IEIEIETLASELQVEAIENGSLDIGFIRPPVLASLEHLNHQTVYSSKLCVAVCMEQPALN 180
I+IE+ TL+SELQ+E + NGS+D+GFIRPP+ +L +N ++Y++ L VA + P L+
Sbjct 121 IDIEMNTLSSELQLEYLLNGSIDLGFIRPPIYHNLNDVNAISLYTAPLYVAAHISDPFLS 180
Query 181 Q-QKVKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQN 239
+ +++ + +L + FVS+PH RGGLSYLAANLCL +GF+P+ + I SRK +QL+LV+
Sbjct 181 EKERISIRELASLDFVSVPHKARGGLSYLAANLCLVNGFTPKRSRIYSRKRSQLELVANG 240
Query 240 LGICIVPQDFESVLPNNVRLIELDHESRFSPVVLLWKKETDSLLQCCVEEIFKSFYDSK 298
GICIVP++F+ +LP+NVRLI + E+ S V L+WKK+ D ++ C + I ++Y +K
Sbjct 241 FGICIVPEEFKVILPSNVRLIPIQDENTLSEVKLIWKKDNDLIVNSCADAI-HAYYSTK 298
>N9E6K0 HTH lysR-type domain-containing protein [Acinetobacter
beijerinckii ANC 3835]
Length=303
Score = 323 bits (827), Expect = 3e-114
Identities = 162/299 (54%), Positives = 229/299 (77%), Gaps = 2/299 (1%)
Query 1 MSTLKQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTT 60
M TLKQF Y +TIVETG FIAASE+LFIAQSALSRQ+ LE+ELGF IFDRSEKKIKLT
Sbjct 1 MWTLKQFNYLITIVETGGFIAASEKLFIAQSALSRQIKNLEEELGFEIFDRSEKKIKLTP 60
Query 61 AGDQFYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVILNQDKLKLFKQLCIEYQ 120
AG+ Y+ +K + L+++I+SAQ++++G+GRI +IAHSSS++L+Q+KL++F+QLC
Sbjct 61 AGEALYKSLKTNIDHLKSSIVSAQSISRGEGRIIKIAHSSSIVLDQNKLEVFEQLCDANM 120
Query 121 IEIEIETLASELQVEAIENGSLDIGFIRPPVLASLEHLNHQTVYSSKLCVAVCMEQPALN 180
I+IE+ TL+SELQ+E + NG++D+GFIRPP+ +L +N ++Y++ L VA P L+
Sbjct 121 IDIEMNTLSSELQLEYLLNGTIDLGFIRPPIYHNLNEVNSISLYTAPLYVAAHSSDPFLS 180
Query 181 Q-QKVKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQN 239
+ + V + +L+ + FVS+PH RGGLSYLAANLCL +GFSP+ I SRK +QL+LV+
Sbjct 181 EKESVSIRELEQLNFVSVPHKGRGGLSYLAANLCLVNGFSPKRTRIYSRKRSQLELVANG 240
Query 240 LGICIVPQDFESVLPNNVRLIELDHESRFSPVVLLWKKETDSLLQCCVEEIFKSFYDSK 298
GICIVP++F+ +LPNNVRLI + E+ S V L+WKK+ D ++ C + I + +Y+SK
Sbjct 241 FGICIVPEEFKVILPNNVRLIPIKDENALSEVKLIWKKDQDPVINRCADSIHR-YYESK 298
>N9NEI4 HTH lysR-type domain-containing protein [Acinetobacter
vivianii]
Length=298
Score = 321 bits (823), Expect = 1e-113
Identities = 158/299 (53%), Positives = 231/299 (77%), Gaps = 2/299 (1%)
Query 1 MSTLKQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTT 60
M TLKQF Y +TIVETG FIAASE+LFIAQSALSRQ+ LE+ELGF IFDRSEKKIKLTT
Sbjct 1 MWTLKQFNYLITIVETGGFIAASEKLFIAQSALSRQIKNLEEELGFEIFDRSEKKIKLTT 60
Query 61 AGDQFYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVILNQDKLKLFKQLCIEYQ 120
AG+ Y+ +K + L+++I+SAQ++++G+GRI +IAHSSS++L+Q+KL++FKQLC +
Sbjct 61 AGEALYKSLKTNIDHLKSSIVSAQSISRGEGRIIKIAHSSSIVLDQNKLEIFKQLCDTHN 120
Query 121 IEIEIETLASELQVEAIENGSLDIGFIRPPVLASLEHLNHQTVYSSKLCVAVCMEQPALN 180
I+IE+ TL+SELQ+E + NG++D+GFIRPP+ +L +N ++Y++ L VA + P L
Sbjct 121 IDIEMNTLSSELQLEYLLNGTIDLGFIRPPIYHNLNDVNAISLYTAPLYVAAHIADPFLG 180
Query 181 Q-QKVKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQN 239
+ +++ + +L + FVS+PH RGGLSYLAANLCL +GF+P+ + I SRK +QL+LV+
Sbjct 181 EKERISIRELASLDFVSVPHKARGGLSYLAANLCLVNGFTPKRSRIYSRKRSQLELVANG 240
Query 240 LGICIVPQDFESVLPNNVRLIELDHESRFSPVVLLWKKETDSLLQCCVEEIFKSFYDSK 298
GICIVP++F+ +LP+NVRLI + E+ S V L+W+K+ D ++ C + + ++Y S+
Sbjct 241 FGICIVPEEFKVILPSNVRLIPIQDENTLSEVKLIWRKDNDLIVNSCADAV-HAYYSSQ 298
>Q9Z9Y7 LysR-type regulator [Frateuria sp. ANA-18]
Length=303
Score = 102 bits (255), Expect = 9e-29
Identities = 75/293 (26%), Positives = 136/293 (46%), Gaps = 4/293 (1%)
Query 4 LKQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTTAGD 63
L+QFRYFV + +F A+ QL IAQ LSRQ+ LLE+E+G + R+ + ++LT AG
Sbjct 3 LRQFRYFVAVARERNFTRAARQLNIAQPPLSRQIQLLEEEVGVPLLIRNSRPVQLTDAGR 62
Query 64 QFYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVILNQDKLKLFKQLCIEYQIEI 123
F+ + L ++ + + + + + I +S + + K +++I
Sbjct 63 LFFEQAIQVLGRVEQMQAATRRVGLHQRSVLSIGFVASTLYGVLPTLMRKLRQHAPELDI 122
Query 124 EIETLASELQVEAIENGSLDIGFIRPPVLASLEHLNHQTVYSSKLCVAVCMEQP-ALNQQ 182
++ L S Q++AI G +DIGF R V S +++ ++ +L VA+ ME P A
Sbjct 123 QMIELMSVQQIQAINEGRIDIGFGR--VHRSDPNVSSIVLHEERLAVALPMESPMAREST 180
Query 183 KVKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQNLGI 242
+ + L + P R G + N+ H P + T L LV+ G+
Sbjct 181 PLPVHQLAGEKLIVYPKEPRPGFADQVLNILDRHDIQPGQVMEVREIQTALGLVAAEFGV 240
Query 243 CIVPQDFESVLPNNVRLIELDHESRFSPVVLLWKKETDSLLQCCVEEIFKSFY 295
C++P + ++V +D + SPV++ + S +++ + Y
Sbjct 241 CVIPASARQ-MRHDVHYRLIDGDRATSPVIVSHRANDSSKYISLTKQLIREMY 292
>A7KS58 Putative LysR-type regulatory protein [Alcaligenes sp.
NyZ215]
Length=305
Score = 100 bits (249), Expect = 6e-28
Identities = 73/250 (29%), Positives = 123/250 (49%), Gaps = 6/250 (2%)
Query 4 LKQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTTAGD 63
L+ +YFV + + S A+ +L I+Q L+RQ+ LEDE+G +F RS K + LT AG+
Sbjct 3 LRNLKYFVAVAQEKSIGLAAIRLNISQPPLTRQIQQLEDEMGAELFIRSAKGVALTQAGE 62
Query 64 QFYRDIKKQLSALQNTILSAQNLAKGK-GRIFRIAHSSSVILNQDKLKLFKQLCIEYQIE 122
++ L + Q+ +GK GRI S + + L F+ + +
Sbjct 63 ILLQEALNILLLVDQATERTQSAGRGKLGRIDIGVFGSGIHVVPRLLLRFRNAYPD--VN 120
Query 123 IEIETLASELQVEAIENGSLDIGFIRPPVLASLEHLNHQTVYSSKLCVAVCMEQPALNQQ 182
+ + TL Q+EA+ L IGF R +L L ++++ + +L VA+ P ++
Sbjct 121 MVVHTLTRSEQIEALRQRRLTIGFHR--MLEPLSDISYELIARERLVVAINKNDPLACRK 178
Query 183 KVKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQNLGI 242
+ L D + P V P S R + L LC S GF+P+ + +T + LV+ G+
Sbjct 179 SISLHDTANHPMVFYPTSARNFIDKL-LGLCRSAGFTPKVSQEVDDLVTAIALVAGGFGL 237
Query 243 CIVPQDFESV 252
C+VP+ S+
Sbjct 238 CVVPESAMSL 247
>Q9RQ20 LysR family transcriptional regulator [Salmonella typhimurium]
Length=292
Score = 100 bits (248), Expect = 7e-28
Identities = 69/252 (27%), Positives = 121/252 (48%), Gaps = 6/252 (2%)
Query 4 LKQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTTAGD 63
L+ RYF+ + E F A+ +L I Q LS+Q+ LE ELG +F R +LT AG
Sbjct 3 LRHIRYFLAVAEERHFTRAATKLGIGQPPLSQQIKDLERELGAQLFRRVPHGAELTEAGK 62
Query 64 QFYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVILNQ---DKLKLFKQLCIEYQ 120
FY +K + +L+AQ +A+G+ + R+ ++S N ++ FK+ + +
Sbjct 63 AFYDVVKGMPATATRAVLAAQRVARGESGVLRVGFTASAAFNSVVPGAIRTFKRAYPDVR 122
Query 121 IEIEIETLASELQVEAIENGSLDIGFIRPPVLASLEHLNHQTVYSSKLCVAVCMEQPALN 180
+++E E ++L + + GSLD+ F+RP + E + + + + + PA
Sbjct 123 LQLE-EGNTTQL-ADELNEGSLDVAFLRPGFTGN-ERFQLRLLSEEPMVIVLAETHPAAA 179
Query 181 QQKVKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQNL 240
+++ LS LKD F+ P L C GF P+ + + + + LVS +
Sbjct 180 CKQIALSILKDEFFLLFPREIGLSLYDAVIKACGKAGFEPKIGQLVPQISSVINLVSAEM 239
Query 241 GICIVPQDFESV 252
G+ +VP V
Sbjct 240 GVSMVPDSMRQV 251
>Q93UZ8 TfdT [Caballeronia sp. NK8]
Length=306
Score = 98.6 bits (244), Expect = 3e-27
Identities = 71/274 (26%), Positives = 127/274 (46%), Gaps = 4/274 (1%)
Query 4 LKQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTTAGD 63
++Q RYFV + E G F A+E++ I+Q L+RQ+ LE ++G +F+RS + + LT AG
Sbjct 3 MRQLRYFVAVAEAGGFGTAAERMHISQPPLTRQIQALERDIGAKLFERSARGVDLTAAGR 62
Query 64 QFYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVILNQDKLKLFKQLCIEYQIEI 123
F D ++ L+ Q + +Q A+G+ + + + + + +
Sbjct 63 VFLEDARQLLTLAQRSSQRSQAAARGESGELNLVYFGTPVFETVPAFIRAFRATYPDASV 122
Query 124 EIETLASELQVEAIENGSLDIGFIR-PPVLASLEHLNHQTVYSSKLCVAVCMEQPALNQQ 182
+ + E Q+E++ +G +DIGF R PV + N + + L VAV +
Sbjct 123 AVSHMTKEEQLESLLSGVVDIGFGRFYPVTDGVTSWN---IGAESLHVAVADPWDERARG 179
Query 183 KVKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQNLGI 242
L+DL D+P + P DR + +L S G P+ A I L L + +G
Sbjct 180 ARMLADLIDVPVILYPRGDRPSFADKVVSLFRSEGAEPKIAAEVEDVIAALALTAAGIGA 239
Query 243 CIVPQDFESVLPNNVRLIELDHESRFSPVVLLWK 276
+VP + V ++ L ++ PV +++
Sbjct 240 TLVPASVAHLRWPGVTIVALGQKAPAVPVSCVFR 273
>Q51957 CatR [Pseudomonas putida]
Length=289
Score = 98.2 bits (243), Expect = 3e-27
Identities = 81/285 (28%), Positives = 139/285 (49%), Gaps = 7/285 (2%)
Query 4 LKQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTTAGD 63
L+ RYF + ET +F A+E L IAQ LSRQ+ LEDELG L+ R E+ ++LT AG
Sbjct 3 LRHLRYFKVLAETLNFTRAAELLHIAQPPLSRQISQLEDELGTLLIAR-ERPLRLTEAGR 61
Query 64 QFYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVILNQDKLKLFKQLCIEYQIEI 123
FY L LQN + + + +G+ + I + S + N +L ++L + ++E+
Sbjct 62 FFYEQTCTVLQ-LQNISDNTRRIGQGQRQWLGIGFAPSTLYNV-LPELIRELRQDSELEL 119
Query 124 EIETLASELQVEAIENGSLDIGFIRPPVLASLEHLNHQTVYSSKLCVAVCMEQPALNQQK 183
+ + + QVEA+++G +DI F R + + Q V VAV + L
Sbjct 120 GLSEMTTLQQVEALKSGRIDIAFGR---IRIEDAAIAQQVLREDPLVAVLPKGHPLAGSP 176
Query 184 VKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQNLGIC 243
+ L+ L F+ P + R + L HG S + + + T + LV+ +G+
Sbjct 177 LSLAQLAGEAFILYPANPRPSYADHVLALFAQHGMSIRVSQWANELQTAIGLVAVGVGVT 236
Query 244 IVPQDFESVLPNNVRLIELDHESRFSPVVLLWKK-ETDSLLQCCV 287
+VP + ++ + L S SP++L +K + ++Q C+
Sbjct 237 LVPASVQQQHRTDIEYVGLLDSSAVSPIILSRRKGDVSPIVQRCL 281
>Q7WTJ0 Ben and cat operon transcriptional regulator [Acinetobacter
calcoaceticus]
Length=319
Score = 98.6 bits (244), Expect = 4e-27
Identities = 86/302 (28%), Positives = 146/302 (48%), Gaps = 26/302 (9%)
Query 4 LKQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTTAGD 63
L+ RYFV +VE SF A+E+LFIAQ LSRQ+ LE ELG +F+R + ++ T AG
Sbjct 3 LRHLRYFVAVVEEQSFTKAAEKLFIAQPPLSRQIQNLESELGIQLFERGSRPLQTTPAGH 62
Query 64 QFYRDIKKQLSALQNTILSAQNLAKGKGRIFR---IAHSSSVI--LNQDKLKLFKQLCIE 118
FY+ K LS + +++ K G I R I S++ L + LF+Q +
Sbjct 63 FFYQHALKLLSNAE----EIKSMTKRIGLIERSVTIGFVGSLLYGLLPRIIYLFRQQ--Q 116
Query 119 YQIEIEIETLASELQVEAIENGSLDIGFIRPPVLASLEHLNHQTVYSSKLCVAVCMEQP- 177
+ I++ L++ Q++A++ G +D+GF R + S + + +L VA P
Sbjct 117 PHLNIQLMELSTTEQLQALKEGRIDVGFGR--LRISDPAVRRILLRKERLVVAAHTSHPI 174
Query 178 ALNQQKVKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQ--- 234
A + V L+DL D P S + S N+ H P+ +I ++Q
Sbjct 175 AQRTEGVYLADLIDEKMFMYPTSPKPNFSTQLLNIFAEHSLVPK----NMHEIREIQLAL 230
Query 235 -LVSQNLGICIVPQDFESVLPNNVRLIELDHESRFSPVVL----LWKKETDSLLQCCVEE 289
LV+ G+CI+P +++ ++ I + SP+ + + + E LL C+ +
Sbjct 231 GLVAAGEGLCIIPASADTIRFPHLNYIPILDNGAVSPIFITARAMDRSEDLQLLFDCIYQ 290
Query 290 IF 291
++
Sbjct 291 VY 292
>O50643 SalR [Pseudomonas putida]
Length=309
Score = 98.2 bits (243), Expect = 5e-27
Identities = 70/294 (24%), Positives = 132/294 (45%), Gaps = 6/294 (2%)
Query 4 LKQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTTAGD 63
++Q + F+ + +T +F A+E L +AQ +LS+Q++LLE+ELGF +F R + ++LT AG
Sbjct 3 IRQLKRFIAVAQTQNFTRAAELLHVAQPSLSKQILLLEEELGFALFKRETRPVQLTEAGR 62
Query 64 QFYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVILNQDKLKLFKQLCIEYQIEI 123
+FY D + ++ +A+ +A G I +S + + + + ++
Sbjct 63 RFYEDSLAVIGRVEQMAQNARRVALGDREKLTIGFVASALYAALPTVIRRLRRVRPDLDF 122
Query 124 EIETLASELQVEAIENGSLDIGFIRPPVLASLEHLNHQTVYSSKLCVAV-CMEQPALNQQ 182
+ + S Q+ A++ G +D+GF R V + + +L A A
Sbjct 123 KWVEMTSGEQIIALQEGKIDVGFGR--VYTETTEVCRTVLREERLLAAFPSTFALAAEAS 180
Query 183 KVKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQNLGI 242
+ LS+ D+P + P + L +HG T L L S G
Sbjct 181 PISLSEFGDLPVIVYPAHIHPSFADQVTKLLQAHGSVASEIHAVGDLQTALGLASAESGY 240
Query 243 CIVPQDFESVLPN-NVRLIELDHESRFSPVVLLWKKETDSLLQCCVEEIFKSFY 295
CI+P + P RLI SP+++ ++ E +S + ++++ + Y
Sbjct 241 CIIPASARHLRPELTYRLI--SEPEAVSPLIMSYRPEDESGIVATIKQLTRELY 292
>Q8GH62 LysR-type transcriptional regulator [Streptomyces griseus]
Length=300
Score = 96.7 bits (239), Expect = 1e-26
Identities = 75/292 (26%), Positives = 145/292 (50%), Gaps = 7/292 (2%)
Query 4 LKQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTTAGD 63
L+ RYF + ET F A+E+L +AQ ALS + LE ELG +F R+ ++++LT AG+
Sbjct 3 LRHLRYFTAVAETCHFGKAAERLHMAQPALSHAIRQLEAELGAPLFTRTTRQVRLTPAGE 62
Query 64 QFYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHS-SSVILNQDKL-KLFKQLCIEYQI 121
+ ++ L +++++ + +A G+ + R+ + +S + ++ + K+ +
Sbjct 63 FLLGEAQRVLDTVEDSVRGVRRIADGRLGLVRVGFTGTSAFSHLPRIARAVKRDLPGVAV 122
Query 122 EIEIETLASELQVEAIENGSLDIGFIRPPVLASLEHLNHQTVYSSKLCVAVCMEQPALNQ 181
E+ + L + Q + + NG LD+ +RPP A E ++ T+ L +AV + +
Sbjct 123 EVHAD-LLTPAQCDGLRNGDLDLAVLRPP--AQGEDIDLHTLEVEPLILAVPADHRLAVE 179
Query 182 QKVKLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQNLG 241
V ++DL+ F+S D ++ C + GFSP + L LV+ LG
Sbjct 180 PVVSVADLRTEGFISYAAKD-SVVNDAVMRSCQAAGFSPHREHEAAGTAVLLALVAGGLG 238
Query 242 ICIVPQDFESVLPNNVRLIELDHESRFSPVVLLWKKETDSLLQCCVEEIFKS 293
I ++P ++ V +L ++ + L W+++ DS L V E+ ++
Sbjct 239 IAVLPASARALPLAGVVFRDL-ADAGTVELALAWRRDNDSPLVRSVLEVLEA 289
>A0A125R5P0 LysR type regulator [Burkholderia sp. BC1]
Length=294
Score = 96.3 bits (238), Expect = 2e-26
Identities = 80/276 (29%), Positives = 126/276 (46%), Gaps = 11/276 (4%)
Query 4 LKQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTTAGD 63
L+ RYF+ + E G F A+E+L I Q ALS Q+ LEDELG +F RS +K+ LT AG
Sbjct 3 LRHLRYFLAVAEEGHFGRAAERLHIVQPALSVQIRALEDELGTALFVRSTRKVMLTDAGR 62
Query 64 QFYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVILN---QDKLKLFKQLCIEYQ 120
+ ++ L + Q A+G+ + RI + + D L F +
Sbjct 63 MLVTEARRTLEQAERAKTLIQRAARGETGVVRIGFVGNAVATGRLSDDLTAFHAAWPD-- 120
Query 121 IEIEIETLASELQVEAIENGSLDIGFIRPPVLASLEHLNHQTVYSSKLCVAVCMEQPALN 180
+ +E+ +A Q +AI G LDIG+ A L+ +TV + V + P
Sbjct 121 VALELHEMAPAAQQDAILAGRLDIGYCPAFGTAFDPKLSVRTVGNWAWQVVMSDRHPLAK 180
Query 181 QQKVKLSDLKDIPFV--SMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQ 238
++ V ++ L D PF+ + D G L+ L L G +P+ A S ++ L L
Sbjct 181 RRTVPIAALMDEPFILYAADGDDEGQLAILRQVL----GRAPRVAHKVSSTLSVLALTGA 236
Query 239 NLGICIVPQDFESVLPNNVRLIELDHESRFSPVVLL 274
LG+ + P + NV +L S +V+L
Sbjct 237 GLGVALAPAPLSRIAAPNVVYRKLGKGGPRSELVVL 272
>O87607 Lys-R type regulatory protein [Pseudomonas aeruginosa]
Length=294
Score = 95.1 bits (235), Expect = 5e-26
Identities = 64/274 (23%), Positives = 132/274 (48%), Gaps = 2/274 (1%)
Query 5 KQFRYFVTIVETGSFIAASEQLFIAQSALSRQMMLLEDELGFLIFDRSEKKIKLTTAGDQ 64
+Q RYF+ + E G+ AA+ +L I+Q ++RQ+ LE +LG ++F+R+ + ++LT AG
Sbjct 4 RQLRYFIAVAEEGNIGAAARRLHISQPPITRQIQALEQDLGVVLFERTHRGVELTAAGTT 63
Query 65 FYRDIKKQLSALQNTILSAQNLAKGKGRIFRIAHSSSVILNQDKLKLFKQLCIEYQIEIE 124
F D ++ L + + + ++ ++G+ RIA+ +V+L+ L L + L + +
Sbjct 64 FLEDARRLLHVTEISRVRSRAASRGEIGELRIAYFGTVVLHTLPLLLRQLLSVAPSATVS 123
Query 125 IETLASELQVEAIENGSLDIGFIRPPVLASLEHLNHQTVYSSKLCVAVCMEQPALNQQKV 184
+ ++ Q+EA++ G++DIGF R E + + V + +L + + ++V
Sbjct 124 LTQMSKNRQIEALDAGTIDIGFGR--FYPYQEGVVVRNVTNERLFLGAQKSRARSFGEQV 181
Query 185 KLSDLKDIPFVSMPHSDRGGLSYLAANLCLSHGFSPQPALIRSRKITQLQLVSQNLGICI 244
S L++ P + P R + + + P+ I + L +G+ I
Sbjct 182 HCSALRNEPLILFPREGRPSFADEVIGVFKNARVEPKVVAIVEDVNAAMVLALAGVGVTI 241
Query 245 VPQDFESVLPNNVRLIELDHESRFSPVVLLWKKE 278
VP+ + + EL PV +++ +
Sbjct 242 VPETVAMISWPDFGFTELVGSKATVPVSCIYRHD 275
Lambda K H a alpha
0.323 0.137 0.386 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1228598
Database: 7ce9a1c6304cec9bc2832890f1832405.TrEMBL.fasta
Posted date: May 20, 2024 4:21 PM
Number of letters in database: 5,711
Number of sequences in database: 19
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
