BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: d3beac472cf828654c6a25ac6711a19b.SwissProt.fasta
           28 sequences; 5,837 total letters



Query= ACIAD3219

Length=213
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q6F7R2 Large ribosomal subunit protein uL3 [Acinetobacter baylyi ...  417     2e-154
B0V6W8 Large ribosomal subunit protein uL3 [Acinetobacter baumann...  415     2e-153
A3M983 Large ribosomal subunit protein uL3 [Acinetobacter baumann...  415     2e-153
B7IA39 Large ribosomal subunit protein uL3 [Acinetobacter baumann...  415     2e-153
B7GW02 Large ribosomal subunit protein uL3 [Acinetobacter baumann...  415     2e-153
B2HZM2 Large ribosomal subunit protein uL3 [Acinetobacter baumann...  415     2e-153
B0VQR8 Large ribosomal subunit protein uL3 [Acinetobacter baumann...  413     1e-152
A5WCJ0 Large ribosomal subunit protein uL3 [Psychrobacter sp. (st...  343     5e-125
Q1QDI6 Large ribosomal subunit protein uL3 [Psychrobacter cryohal...  330     7e-120
Q4FUF6 Large ribosomal subunit protein uL3 [Psychrobacter arcticu...  329     1e-119
B1JDW4 Large ribosomal subunit protein uL3 [Pseudomonas putida (s...  315     6e-114
Q88QN5 Large ribosomal subunit protein uL3 [Pseudomonas putida (s...  312     7e-113
B0KK67 Large ribosomal subunit protein uL3 [Pseudomonas putida (s...  312     7e-113
A5VXP7 Large ribosomal subunit protein uL3 [Pseudomonas putida (s...  312     7e-113
Q9HWD5 Large ribosomal subunit protein uL3 [Pseudomonas aeruginos...  311     1e-112
Q02T80 Large ribosomal subunit protein uL3 [Pseudomonas aeruginos...  311     1e-112
B7V644 Large ribosomal subunit protein uL3 [Pseudomonas aeruginos...  311     1e-112
A6UZI8 Large ribosomal subunit protein uL3 [Pseudomonas aeruginos...  311     1e-112
P11252 Large ribosomal subunit protein uL3 [Yersinia pseudotuberc...  290     3e-104
P60438 Large ribosomal subunit protein uL3 [Escherichia coli (str...  286     2e-102
P94799 Large ribosomal subunit protein uL3 [Aggregatibacter actin...  193     5e-67 
P42920 Large ribosomal subunit protein uL3 [Bacillus subtilis (st...  186     4e-63 
P15766 Large ribosomal subunit protein uL3c [Cyanophora paradoxa]     184     2e-62 
P30762 Large ribosomal subunit protein uL3 [Mycobacterium leprae ...  184     3e-62 
P60441 Large ribosomal subunit protein uL3 [Mycobacterium bovis (...  184     4e-62 
P38515 Large ribosomal subunit protein uL3 [Thermotoga maritima (...  181     4e-61 
P48952 Large ribosomal subunit protein uL3 [Rickettsia prowazekii...  181     5e-61 
P28600 Large ribosomal subunit protein uL3 [Geobacillus stearothe...  179     4e-60 


>Q6F7R2 Large ribosomal subunit protein uL3 [Acinetobacter baylyi 
(strain ATCC 33305 / BD413 / ADP1)]
Length=212

 Score = 417 bits (1073),  Expect = 2e-154
 Identities = 212/212 (100%), Positives = 212/212 (100%), Gaps = 0/212 (0%)

Query  1    MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR  60
            MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR
Sbjct  1    MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR  60

Query  61   VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKG  120
            VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKG
Sbjct  61   VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKG  120

Query  121  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  180
            FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI
Sbjct  121  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  180

Query  181  VSIDAERSVLVVKGAIPGATGGDVIVRPTIKA  212
            VSIDAERSVLVVKGAIPGATGGDVIVRPTIKA
Sbjct  181  VSIDAERSVLVVKGAIPGATGGDVIVRPTIKA  212


>B0V6W8 Large ribosomal subunit protein uL3 [Acinetobacter baumannii 
(strain AYE)]
Length=212

 Score = 415 bits (1066),  Expect = 2e-153
 Identities = 208/212 (98%), Positives = 211/212 (99%), Gaps = 0/212 (0%)

Query  1    MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR  60
            MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR
Sbjct  1    MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR  60

Query  61   VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKG  120
            VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGRE+GGTIGVDLFTVGQ+VDVTGQSKGKG
Sbjct  61   VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKG  120

Query  121  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  180
            FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI
Sbjct  121  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  180

Query  181  VSIDAERSVLVVKGAIPGATGGDVIVRPTIKA  212
            VS+D ERSVLVVKGAIPGATGGDVIVRPTIKA
Sbjct  181  VSVDTERSVLVVKGAIPGATGGDVIVRPTIKA  212


>A3M983 Large ribosomal subunit protein uL3 [Acinetobacter baumannii 
(strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 
/ 5377)]
Length=212

 Score = 415 bits (1066),  Expect = 2e-153
 Identities = 208/212 (98%), Positives = 211/212 (99%), Gaps = 0/212 (0%)

Query  1    MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR  60
            MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR
Sbjct  1    MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR  60

Query  61   VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKG  120
            VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGRE+GGTIGVDLFTVGQ+VDVTGQSKGKG
Sbjct  61   VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKG  120

Query  121  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  180
            FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI
Sbjct  121  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  180

Query  181  VSIDAERSVLVVKGAIPGATGGDVIVRPTIKA  212
            VS+D ERSVLVVKGAIPGATGGDVIVRPTIKA
Sbjct  181  VSVDTERSVLVVKGAIPGATGGDVIVRPTIKA  212


>B7IA39 Large ribosomal subunit protein uL3 [Acinetobacter baumannii 
(strain AB0057)]
Length=212

 Score = 415 bits (1066),  Expect = 2e-153
 Identities = 208/212 (98%), Positives = 211/212 (99%), Gaps = 0/212 (0%)

Query  1    MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR  60
            MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR
Sbjct  1    MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR  60

Query  61   VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKG  120
            VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGRE+GGTIGVDLFTVGQ+VDVTGQSKGKG
Sbjct  61   VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKG  120

Query  121  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  180
            FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI
Sbjct  121  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  180

Query  181  VSIDAERSVLVVKGAIPGATGGDVIVRPTIKA  212
            VS+D ERSVLVVKGAIPGATGGDVIVRPTIKA
Sbjct  181  VSVDTERSVLVVKGAIPGATGGDVIVRPTIKA  212


>B7GW02 Large ribosomal subunit protein uL3 [Acinetobacter baumannii 
(strain AB307-0294)]
Length=212

 Score = 415 bits (1066),  Expect = 2e-153
 Identities = 208/212 (98%), Positives = 211/212 (99%), Gaps = 0/212 (0%)

Query  1    MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR  60
            MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR
Sbjct  1    MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR  60

Query  61   VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKG  120
            VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGRE+GGTIGVDLFTVGQ+VDVTGQSKGKG
Sbjct  61   VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKG  120

Query  121  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  180
            FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI
Sbjct  121  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  180

Query  181  VSIDAERSVLVVKGAIPGATGGDVIVRPTIKA  212
            VS+D ERSVLVVKGAIPGATGGDVIVRPTIKA
Sbjct  181  VSVDTERSVLVVKGAIPGATGGDVIVRPTIKA  212


>B2HZM2 Large ribosomal subunit protein uL3 [Acinetobacter baumannii 
(strain ACICU)]
Length=214

 Score = 415 bits (1066),  Expect = 2e-153
 Identities = 208/212 (98%), Positives = 211/212 (99%), Gaps = 0/212 (0%)

Query  1    MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR  60
            MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR
Sbjct  3    MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR  62

Query  61   VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKG  120
            VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGRE+GGTIGVDLFTVGQ+VDVTGQSKGKG
Sbjct  63   VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKG  122

Query  121  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  180
            FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI
Sbjct  123  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  182

Query  181  VSIDAERSVLVVKGAIPGATGGDVIVRPTIKA  212
            VS+D ERSVLVVKGAIPGATGGDVIVRPTIKA
Sbjct  183  VSVDTERSVLVVKGAIPGATGGDVIVRPTIKA  214


>B0VQR8 Large ribosomal subunit protein uL3 [Acinetobacter baumannii 
(strain SDF)]
Length=212

 Score = 413 bits (1061),  Expect = 1e-152
 Identities = 207/212 (98%), Positives = 210/212 (99%), Gaps = 0/212 (0%)

Query  1    MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR  60
            MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR
Sbjct  1    MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR  60

Query  61   VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKG  120
            VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGRE+GGTIGVDLFTVGQ+VDVTGQSKGKG
Sbjct  61   VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKG  120

Query  121  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  180
            FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI
Sbjct  121  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  180

Query  181  VSIDAERSVLVVKGAIPGATGGDVIVRPTIKA  212
            VS+D ERSVLVVKGAIPGATGGDVIVRP IKA
Sbjct  181  VSVDTERSVLVVKGAIPGATGGDVIVRPAIKA  212


>A5WCJ0 Large ribosomal subunit protein uL3 [Psychrobacter sp. 
(strain PRwf-1)]
Length=212

 Score = 343 bits (880),  Expect = 5e-125
 Identities = 168/212 (79%), Positives = 189/212 (89%), Gaps = 0/212 (0%)

Query  1    MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR  60
            MAIGLVG+KCGMTR+FT+ G S+PVTV+EVD NRITQIKT +TDGYQA+Q+TTGERR+SR
Sbjct  1    MAIGLVGKKCGMTRVFTETGASIPVTVVEVDANRITQIKTNDTDGYQAIQITTGERRDSR  60

Query  61   VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKG  120
            VT AQKGHFAKAGV AGR V EFRVTE ELEGRE G  I  DLF  GQ+VDVTGQSKGKG
Sbjct  61   VTAAQKGHFAKAGVKAGRGVWEFRVTEEELEGREAGSEIAADLFEAGQLVDVTGQSKGKG  120

Query  121  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  180
            FQGGVKR NF  QDATHGNSVSHRVLGSTGQNQ+PG+VFKGKKM G +G++RVTVQGLE+
Sbjct  121  FQGGVKRHNFSMQDATHGNSVSHRVLGSTGQNQSPGKVFKGKKMPGQMGNKRVTVQGLEV  180

Query  181  VSIDAERSVLVVKGAIPGATGGDVIVRPTIKA  212
            VS+DAE+ +LV+KGAIPGA GGDVIVRP+IKA
Sbjct  181  VSVDAEKGLLVIKGAIPGANGGDVIVRPSIKA  212


>Q1QDI6 Large ribosomal subunit protein uL3 [Psychrobacter cryohalolentis 
(strain ATCC BAA-1226 / DSM 17306 / VKM B-2378 / 
K5)]
Length=212

 Score = 330 bits (846),  Expect = 7e-120
 Identities = 158/212 (75%), Positives = 185/212 (87%), Gaps = 0/212 (0%)

Query  1    MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR  60
            MAIGLVG+KCGMTR+FT+AG S+PVTV+E+  NRITQ+K  + DGYQA+QVTTG RR+SR
Sbjct  1    MAIGLVGKKCGMTRVFTEAGASIPVTVVEISANRITQVKNTDVDGYQAIQVTTGTRRDSR  60

Query  61   VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKG  120
            VT AQKGHFAKAGVAAGR V EFR  +++LEGREIGG I  DLF  GQ+VDVTG SKGKG
Sbjct  61   VTAAQKGHFAKAGVAAGRGVWEFRANDSDLEGREIGGEILADLFEQGQMVDVTGNSKGKG  120

Query  121  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  180
            FQGGVKR NF  QDATHGNSVSHR +GSTGQNQ+PG+VFKGKKM G +G++RVTVQGLE+
Sbjct  121  FQGGVKRHNFSMQDATHGNSVSHRAIGSTGQNQSPGKVFKGKKMPGQMGNKRVTVQGLEV  180

Query  181  VSIDAERSVLVVKGAIPGATGGDVIVRPTIKA  212
            +S+D E  +LV+KGAIPGATGGDVIVRP++KA
Sbjct  181  ISVDVENGLLVIKGAIPGATGGDVIVRPSVKA  212


>Q4FUF6 Large ribosomal subunit protein uL3 [Psychrobacter arcticus 
(strain DSM 17307 / VKM B-2377 / 273-4)]
Length=212

 Score = 329 bits (844),  Expect = 1e-119
 Identities = 159/212 (75%), Positives = 186/212 (88%), Gaps = 0/212 (0%)

Query  1    MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR  60
            MAIGLVG+KCGMTR+FT+AG S+PVTV+E+  NRITQ+K  + DGYQA+QVTTG RR+SR
Sbjct  1    MAIGLVGKKCGMTRVFTEAGASIPVTVVEISANRITQVKNTDVDGYQAIQVTTGTRRDSR  60

Query  61   VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKG  120
            VT AQKGHFAKAGVAAGR V EFR  +++LEGREIGG I  DLF  GQ+VDVTG SKGKG
Sbjct  61   VTAAQKGHFAKAGVAAGRGVWEFRANDSDLEGREIGGEILADLFEQGQMVDVTGSSKGKG  120

Query  121  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  180
            FQG VKR NF  QDATHGNSVSHR  GSTGQNQ+PG+VFKGKKMAG +G++RVTVQGLE+
Sbjct  121  FQGPVKRHNFSMQDATHGNSVSHRAHGSTGQNQSPGKVFKGKKMAGQMGNKRVTVQGLEV  180

Query  181  VSIDAERSVLVVKGAIPGATGGDVIVRPTIKA  212
            +S+DAE+ +LV+KGAIPGATGGDVIVRP++KA
Sbjct  181  ISVDAEKGLLVIKGAIPGATGGDVIVRPSVKA  212


>B1JDW4 Large ribosomal subunit protein uL3 [Pseudomonas putida 
(strain W619)]
Length=211

 Score = 315 bits (807),  Expect = 6e-114
 Identities = 156/212 (74%), Positives = 179/212 (84%), Gaps = 3/212 (1%)

Query  1    MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR  60
            M IG+VGRKCGMTRIFT+ GVS+PVTVIE++PNR+TQ KT ETDGY+AVQVT GERR SR
Sbjct  1    MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR  60

Query  61   VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKG  120
            VT AQ GHFAKA VAAGR V EFR+ E E +    G +I  +LFT GQ+VDVTGQSKGKG
Sbjct  61   VTAAQAGHFAKANVAAGRGVWEFRLEEGEFQA---GDSIKAELFTAGQLVDVTGQSKGKG  117

Query  121  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  180
            F G +KRWNFR QD THGNSVSHRV GS GQ QTPGRVFKGKKM+GH+G ERVTVQ LE+
Sbjct  118  FAGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEV  177

Query  181  VSIDAERSVLVVKGAIPGATGGDVIVRPTIKA  212
            V +DAER++L+VKGA+PGATGGDV+VRP +KA
Sbjct  178  VRVDAERNLLLVKGAVPGATGGDVVVRPAVKA  209


>Q88QN5 Large ribosomal subunit protein uL3 [Pseudomonas putida 
(strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / 
KT2440)]
Length=211

 Score = 312 bits (800),  Expect = 7e-113
 Identities = 153/212 (72%), Positives = 178/212 (84%), Gaps = 3/212 (1%)

Query  1    MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR  60
            M IG++GRKCGMTRIFT+ GVS+PVTVIE++PNR+TQ KT ETDGY+AVQVT GERR SR
Sbjct  1    MTIGVIGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR  60

Query  61   VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKG  120
            VT AQ GHFAKA VAAGR V EFR+ E + +    G  I  +LFT GQ+VDVTGQSKGKG
Sbjct  61   VTAAQAGHFAKANVAAGRGVWEFRLEEGDFQA---GDLIKAELFTAGQLVDVTGQSKGKG  117

Query  121  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  180
            F G +KRWNFR QD THGNSVSHRV GS GQ QTPGRVFKGKKM+GH+G ERVTVQ LE+
Sbjct  118  FAGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEV  177

Query  181  VSIDAERSVLVVKGAIPGATGGDVIVRPTIKA  212
            V +DAER++L++KGA+PGATGGDV+VRP +KA
Sbjct  178  VRVDAERNLLLIKGAVPGATGGDVVVRPAVKA  209


>B0KK67 Large ribosomal subunit protein uL3 [Pseudomonas putida 
(strain GB-1)]
Length=211

 Score = 312 bits (800),  Expect = 7e-113
 Identities = 153/212 (72%), Positives = 178/212 (84%), Gaps = 3/212 (1%)

Query  1    MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR  60
            M IG++GRKCGMTRIFT+ GVS+PVTVIE++PNR+TQ KT ETDGY+AVQVT GERR SR
Sbjct  1    MTIGVIGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR  60

Query  61   VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKG  120
            VT AQ GHFAKA VAAGR V EFR+ E + +    G  I  +LFT GQ+VDVTGQSKGKG
Sbjct  61   VTAAQAGHFAKANVAAGRGVWEFRLEEGDFQA---GDLIKAELFTAGQLVDVTGQSKGKG  117

Query  121  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  180
            F G +KRWNFR QD THGNSVSHRV GS GQ QTPGRVFKGKKM+GH+G ERVTVQ LE+
Sbjct  118  FAGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEV  177

Query  181  VSIDAERSVLVVKGAIPGATGGDVIVRPTIKA  212
            V +DAER++L++KGA+PGATGGDV+VRP +KA
Sbjct  178  VRVDAERNLLLIKGAVPGATGGDVVVRPAVKA  209


>A5VXP7 Large ribosomal subunit protein uL3 [Pseudomonas putida 
(strain ATCC 700007 / DSM 6899 / BCRC 17059 / F1)]
Length=211

 Score = 312 bits (800),  Expect = 7e-113
 Identities = 153/212 (72%), Positives = 178/212 (84%), Gaps = 3/212 (1%)

Query  1    MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR  60
            M IG++GRKCGMTRIFT+ GVS+PVTVIE++PNR+TQ KT ETDGY+AVQVT GERR SR
Sbjct  1    MTIGVIGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR  60

Query  61   VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKG  120
            VT AQ GHFAKA VAAGR V EFR+ E + +    G  I  +LFT GQ+VDVTGQSKGKG
Sbjct  61   VTAAQAGHFAKANVAAGRGVWEFRLEEGDFQA---GDLIKAELFTAGQLVDVTGQSKGKG  117

Query  121  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  180
            F G +KRWNFR QD THGNSVSHRV GS GQ QTPGRVFKGKKM+GH+G ERVTVQ LE+
Sbjct  118  FAGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEV  177

Query  181  VSIDAERSVLVVKGAIPGATGGDVIVRPTIKA  212
            V +DAER++L++KGA+PGATGGDV+VRP +KA
Sbjct  178  VRVDAERNLLLIKGAVPGATGGDVVVRPAVKA  209


>Q9HWD5 Large ribosomal subunit protein uL3 [Pseudomonas aeruginosa 
(strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 
/ LMG 12228 / 1C / PRS 101 / PAO1)]
Length=211

 Score = 311 bits (798),  Expect = 1e-112
 Identities = 159/212 (75%), Positives = 176/212 (83%), Gaps = 3/212 (1%)

Query  1    MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR  60
            M IG+VGRKCGMTRIFT+ GVS+PVTVIEV+PNR+TQ KT ETDGY+AVQVT GERR SR
Sbjct  1    MTIGVVGRKCGMTRIFTEEGVSIPVTVIEVEPNRVTQFKTEETDGYRAVQVTAGERRASR  60

Query  61   VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKG  120
            VT AQ GHFAKA VAAGR V EFR+ E +      G  I VDLF  GQ+VDVTG+SKGKG
Sbjct  61   VTKAQAGHFAKANVAAGRGVWEFRLGEEQYAA---GDQITVDLFQAGQMVDVTGESKGKG  117

Query  121  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  180
            F G +KRWNFR QD THGNSVSHRV GS GQ QTPGRVFKGKKM+GHLG ERVTVQ LEI
Sbjct  118  FAGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHLGAERVTVQSLEI  177

Query  181  VSIDAERSVLVVKGAIPGATGGDVIVRPTIKA  212
            V +DAER++L+VKGA+PGATGGDVIVRP  KA
Sbjct  178  VRVDAERNLLLVKGAVPGATGGDVIVRPAAKA  209


>Q02T80 Large ribosomal subunit protein uL3 [Pseudomonas aeruginosa 
(strain UCBPP-PA14)]
Length=211

 Score = 311 bits (798),  Expect = 1e-112
 Identities = 159/212 (75%), Positives = 176/212 (83%), Gaps = 3/212 (1%)

Query  1    MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR  60
            M IG+VGRKCGMTRIFT+ GVS+PVTVIEV+PNR+TQ KT ETDGY+AVQVT GERR SR
Sbjct  1    MTIGVVGRKCGMTRIFTEEGVSIPVTVIEVEPNRVTQFKTEETDGYRAVQVTAGERRASR  60

Query  61   VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKG  120
            VT AQ GHFAKA VAAGR V EFR+ E +      G  I VDLF  GQ+VDVTG+SKGKG
Sbjct  61   VTKAQAGHFAKANVAAGRGVWEFRLGEEQYAA---GDQITVDLFQAGQMVDVTGESKGKG  117

Query  121  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  180
            F G +KRWNFR QD THGNSVSHRV GS GQ QTPGRVFKGKKM+GHLG ERVTVQ LEI
Sbjct  118  FAGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHLGAERVTVQSLEI  177

Query  181  VSIDAERSVLVVKGAIPGATGGDVIVRPTIKA  212
            V +DAER++L+VKGA+PGATGGDVIVRP  KA
Sbjct  178  VRVDAERNLLLVKGAVPGATGGDVIVRPAAKA  209


>B7V644 Large ribosomal subunit protein uL3 [Pseudomonas aeruginosa 
(strain LESB58)]
Length=211

 Score = 311 bits (798),  Expect = 1e-112
 Identities = 159/212 (75%), Positives = 176/212 (83%), Gaps = 3/212 (1%)

Query  1    MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR  60
            M IG+VGRKCGMTRIFT+ GVS+PVTVIEV+PNR+TQ KT ETDGY+AVQVT GERR SR
Sbjct  1    MTIGVVGRKCGMTRIFTEEGVSIPVTVIEVEPNRVTQFKTEETDGYRAVQVTAGERRASR  60

Query  61   VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKG  120
            VT AQ GHFAKA VAAGR V EFR+ E +      G  I VDLF  GQ+VDVTG+SKGKG
Sbjct  61   VTKAQAGHFAKANVAAGRGVWEFRLGEEQYAA---GDQITVDLFQAGQMVDVTGESKGKG  117

Query  121  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  180
            F G +KRWNFR QD THGNSVSHRV GS GQ QTPGRVFKGKKM+GHLG ERVTVQ LEI
Sbjct  118  FAGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHLGAERVTVQSLEI  177

Query  181  VSIDAERSVLVVKGAIPGATGGDVIVRPTIKA  212
            V +DAER++L+VKGA+PGATGGDVIVRP  KA
Sbjct  178  VRVDAERNLLLVKGAVPGATGGDVIVRPAAKA  209


>A6UZI8 Large ribosomal subunit protein uL3 [Pseudomonas aeruginosa 
(strain PA7)]
Length=211

 Score = 311 bits (798),  Expect = 1e-112
 Identities = 159/212 (75%), Positives = 176/212 (83%), Gaps = 3/212 (1%)

Query  1    MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR  60
            M IG+VGRKCGMTRIFT+ GVS+PVTVIEV+PNR+TQ KT ETDGY+AVQVT GERR SR
Sbjct  1    MTIGVVGRKCGMTRIFTEEGVSIPVTVIEVEPNRVTQFKTEETDGYRAVQVTAGERRASR  60

Query  61   VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKG  120
            VT AQ GHFAKA VAAGR V EFR+ E +      G  I VDLF  GQ+VDVTG+SKGKG
Sbjct  61   VTKAQAGHFAKANVAAGRGVWEFRLGEEQYAA---GDQITVDLFQAGQMVDVTGESKGKG  117

Query  121  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  180
            F G +KRWNFR QD THGNSVSHRV GS GQ QTPGRVFKGKKM+GHLG ERVTVQ LEI
Sbjct  118  FAGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHLGAERVTVQSLEI  177

Query  181  VSIDAERSVLVVKGAIPGATGGDVIVRPTIKA  212
            V +DAER++L+VKGA+PGATGGDVIVRP  KA
Sbjct  178  VRVDAERNLLLVKGAVPGATGGDVIVRPAAKA  209


>P11252 Large ribosomal subunit protein uL3 [Yersinia pseudotuberculosis 
serotype I (strain IP32953)]
Length=209

 Score = 290 bits (743),  Expect = 3e-104
 Identities = 144/212 (68%), Positives = 177/212 (83%), Gaps = 6/212 (3%)

Query  3    IGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESRVT  62
            IGLVG+K GMTRIFT+ GVS+PVTVIE++ NR+TQ+K+LE DGY+AVQVTTG ++ +RVT
Sbjct  2    IGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYRAVQVTTGAKKANRVT  61

Query  63   NAQKGHFAKAGVAAGRLVKEFRVTEAELEGREI--GGTIGVDLFTVGQVVDVTGQSKGKG  120
              + GHFAKAGV AGR + EFR+ E    G+E   G  I V++F   + VDVTG SKGKG
Sbjct  62   KPEAGHFAKAGVEAGRGLWEFRLPE----GQEFTAGQEISVEIFADVKKVDVTGTSKGKG  117

Query  121  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  180
            F G VKRWNFRTQDATHGNS+SHRV GS GQNQTPG+VFKGKKMAGH+GDERVTVQ L++
Sbjct  118  FAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHMGDERVTVQSLDV  177

Query  181  VSIDAERSVLVVKGAIPGATGGDVIVRPTIKA  212
            V +DAER++L+VKGA+PGATGG++IV+P +KA
Sbjct  178  VRVDAERNLLLVKGAVPGATGGNLIVKPAVKA  209


>P60438 Large ribosomal subunit protein uL3 [Escherichia coli 
(strain K12)]
Length=209

 Score = 286 bits (731),  Expect = 2e-102
 Identities = 141/210 (67%), Positives = 173/210 (82%), Gaps = 2/210 (1%)

Query  3    IGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESRVT  62
            IGLVG+K GMTRIFT+ GVS+PVTVIEV+ NR+TQ+K L  DGY+A+QVTTG ++ +RVT
Sbjct  2    IGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVT  61

Query  63   NAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKGFQ  122
              + GHFAKAGV AGR + EFR+ E E     +G +I V+LF   + VDVTG SKGKGF 
Sbjct  62   KPEAGHFAKAGVEAGRGLWEFRLAEGE--EFTVGQSISVELFADVKKVDVTGTSKGKGFA  119

Query  123  GGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEIVS  182
            G VKRWNFRTQDATHGNS+SHRV GS GQNQTPG+VFKGKKMAG +G+ERVTVQ L++V 
Sbjct  120  GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVR  179

Query  183  IDAERSVLVVKGAIPGATGGDVIVRPTIKA  212
            +DAER++L+VKGA+PGATG D+IV+P +KA
Sbjct  180  VDAERNLLLVKGAVPGATGSDLIVKPAVKA  209


>P94799 Large ribosomal subunit protein uL3 [Aggregatibacter actinomycetemcomitans]
Length=121

 Score = 193 bits (490),  Expect = 5e-67
 Identities = 92/118 (78%), Positives = 104/118 (88%), Gaps = 0/118 (0%)

Query  95   IGGTIGVDLFTVGQVVDVTGQSKGKGFQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQT  154
            +G  I VD+F   + VDVTG SKGKGFQGGVKRWNFRTQDATHGNS+SHRVLGS GQNQT
Sbjct  4    LGQEINVDIFADVKKVDVTGTSKGKGFQGGVKRWNFRTQDATHGNSLSHRVLGSIGQNQT  63

Query  155  PGRVFKGKKMAGHLGDERVTVQGLEIVSIDAERSVLVVKGAIPGATGGDVIVRPTIKA  212
            PGRVFKGKKMAGHLG+ERVTVQ LE+V +DAER +L+VKGA+PGATG DVIV+P +KA
Sbjct  64   PGRVFKGKKMAGHLGNERVTVQSLEVVRVDAERKLLLVKGAVPGATGSDVIVKPAVKA  121


>P42920 Large ribosomal subunit protein uL3 [Bacillus subtilis 
(strain 168)]
Length=209

 Score = 186 bits (472),  Expect = 4e-63
 Identities = 99/212 (47%), Positives = 137/212 (65%), Gaps = 4/212 (2%)

Query  1    MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR  60
            M  G++GRK GMT++F + G  +PVTVIE  PN + Q KT E DGY+A+Q+   ++RE  
Sbjct  1    MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQLGFDDKREKL  60

Query  61   VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKG  120
                +KGH AKA  A  R VKE R    E++  E+G  + V++F+ G++VDVTG SKGKG
Sbjct  61   SNKPEKGHVAKAETAPKRFVKELR--GVEMDAYEVGQEVKVEIFSAGEIVDVTGVSKGKG  118

Query  121  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  180
            FQG +KR        +HG S  HR  GS G    P RVFKGK + G +G E++TVQ LEI
Sbjct  119  FQGAIKRHGQSRGPMSHG-SRYHRRPGSMGP-VDPNRVFKGKLLPGRMGGEQITVQNLEI  176

Query  181  VSIDAERSVLVVKGAIPGATGGDVIVRPTIKA  212
            V +DAER++L++KG +PGA    + V+  +K+
Sbjct  177  VKVDAERNLLLIKGNVPGAKKSLITVKSAVKS  208


>P15766 Large ribosomal subunit protein uL3c [Cyanophora paradoxa]
Length=209

 Score = 184 bits (468),  Expect = 2e-62
 Identities = 94/202 (47%), Positives = 135/202 (67%), Gaps = 3/202 (1%)

Query  1    MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR  60
            M+IG++G K GMT+IF +AG ++PVT+I+  P  ITQIKT  TDGY A+QV   E +E  
Sbjct  1    MSIGILGTKLGMTQIFDEAGNAIPVTIIQAGPCPITQIKTTATDGYNAIQVGYRETKEKN  60

Query  61   VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKG  120
            +T AQ GH  K   +A R+++EF +  +  +  E+   I V+LF    +V++ G S G+G
Sbjct  61   LTKAQLGHLQKTNNSALRVLQEFSIESS--DSIEVEKPITVELFNDNDIVNIQGYSIGRG  118

Query  121  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  180
            F G  KR NF     +HG S +HR+ GS G   TPGRV+ G +MAG  GD ++T++GL+I
Sbjct  119  FSGYQKRHNFARGPMSHG-SKNHRLPGSIGAGSTPGRVYPGTRMAGRKGDSKITIRGLKI  177

Query  181  VSIDAERSVLVVKGAIPGATGG  202
            V +D+ERS+L+VKG++PG  GG
Sbjct  178  VKVDSERSLLIVKGSVPGKPGG  199


>P30762 Large ribosomal subunit protein uL3 [Mycobacterium leprae 
(strain TN)]
Length=217

 Score = 184 bits (467),  Expect = 3e-62
 Identities = 97/209 (46%), Positives = 129/209 (62%), Gaps = 1/209 (0%)

Query  4    GLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESRVTN  63
            G++G K GMT++F +    VPVTV++  PN +T+I+TLE DGY AVQ+  GE    +V  
Sbjct  5    GILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTLERDGYSAVQLAYGEISPRKVNK  64

Query  64   AQKGHFAKAGVAAGRLVKEFRVTEAELEGR-EIGGTIGVDLFTVGQVVDVTGQSKGKGFQ  122
               G +  AGV   R + E R+   +     E+G  +  ++F     VDVTG SKGKGF 
Sbjct  65   PVTGQYNSAGVNPRRYLAELRLDHPDAAAEYEVGQELTAEIFADATYVDVTGTSKGKGFS  124

Query  123  GGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEIVS  182
            G +KR  FR Q A+HG    HR  GS G   TP RVFKG +MAG +G++RVTVQ L +  
Sbjct  125  GTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLVHK  184

Query  183  IDAERSVLVVKGAIPGATGGDVIVRPTIK  211
            +D E  VL++KGA+PG TGG V+VR  IK
Sbjct  185  VDTENGVLLIKGAVPGRTGGLVMVRSAIK  213


>P60441 Large ribosomal subunit protein uL3 [Mycobacterium bovis 
(strain ATCC BAA-935 / AF2122/97)]
Length=217

 Score = 184 bits (466),  Expect = 4e-62
 Identities = 96/209 (46%), Positives = 132/209 (63%), Gaps = 1/209 (0%)

Query  4    GLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESRVTN  63
            G++G K GMT++F ++   VPVTV++  PN +T+I+T E DGY AVQ+  GE    +V  
Sbjct  5    GILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKVNK  64

Query  64   AQKGHFAKAGVAAGRLVKEFRVTEAELEGR-EIGGTIGVDLFTVGQVVDVTGQSKGKGFQ  122
               G +  AGV   R + E R+ +++     ++G  +  ++F  G  VDVTG SKGKGF 
Sbjct  65   PLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKGFA  124

Query  123  GGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEIVS  182
            G +KR  FR Q A+HG    HR  GS G   TP RVFKG +MAG +G++RVTV  L +  
Sbjct  125  GTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLVHK  184

Query  183  IDAERSVLVVKGAIPGATGGDVIVRPTIK  211
            +DAE  VL++KGA+PG TGG V+VR  IK
Sbjct  185  VDAENGVLLIKGAVPGRTGGLVMVRSAIK  213


>P38515 Large ribosomal subunit protein uL3 [Thermotoga maritima 
(strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / 
MSB8)]
Length=207

 Score = 181 bits (459),  Expect = 4e-61
 Identities = 98/203 (48%), Positives = 131/203 (65%), Gaps = 6/203 (3%)

Query  5    LVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESRVTNA  64
            ++GRK GMTR+F     SVPVTVI+  P  + Q KT+E DGY AVQ+  G  +  +V   
Sbjct  4    IIGRKIGMTRVFV-GNDSVPVTVIKAGPCVVVQKKTVEKDGYNAVQL--GFEKAKKVNKP  60

Query  65   QKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKGFQGG  124
              GHF K GV   ++++EFRV   +    E G  I VD+F  G+ VDVTG +KG+GF G 
Sbjct  61   LAGHFKKFGVEPMKILREFRVENPD--EYEPGQVIKVDVFEKGEYVDVTGWTKGRGFAGA  118

Query  125  VKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEIVSID  184
            +KRW F     +HG+   HR LGS GQ+  P +++KGKKM G  G+ERVTV+ L++V ID
Sbjct  119  MKRWGFSGGPKSHGSKF-HRELGSVGQHTEPAKIWKGKKMPGRYGNERVTVRNLQVVDID  177

Query  185  AERSVLVVKGAIPGATGGDVIVR  207
             E  +LVVKG +PGA GG V++R
Sbjct  178  PENDLLVVKGGVPGARGGLVLIR  200


>P48952 Large ribosomal subunit protein uL3 [Rickettsia prowazekii 
(strain Madrid E)]
Length=216

 Score = 181 bits (459),  Expect = 5e-61
 Identities = 91/211 (43%), Positives = 136/211 (64%), Gaps = 2/211 (1%)

Query  1    MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR  60
            M  G++ +K GMT +F D G  + +T+++VD  ++   KTL   GY A+ +   +++ S+
Sbjct  1    MRTGIIAQKVGMTSVFNDKGERISLTLVKVDDCQVVGHKTLAKHGYNALVIGVKDQKISK  60

Query  61   VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKG  120
            VT   K  FA A +A    +KEFR++E      +I   + VD F VGQ VD+T  + GKG
Sbjct  61   VTKPMKQVFANAKIAPKTKLKEFRISEDNFI--DIASILEVDHFRVGQFVDITATTIGKG  118

Query  121  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  180
            F G +KR NFR  +A+HG S+SHR  GSTGQ Q PG+VFKGKKMAGH+G  +VT+Q L+I
Sbjct  119  FAGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNKVTIQNLKI  178

Query  181  VSIDAERSVLVVKGAIPGATGGDVIVRPTIK  211
             ++D  R +++++G+IPG     ++V+  IK
Sbjct  179  FAVDTNRKLIMIQGSIPGHKNSYLLVKDAIK  209


>P28600 Large ribosomal subunit protein uL3 [Geobacillus stearothermophilus]
Length=213

 Score = 179 bits (453),  Expect = 4e-60
 Identities = 99/212 (47%), Positives = 131/212 (62%), Gaps = 4/212 (2%)

Query  1    MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR  60
            M  G++GRK GMT+IF + G  +PVTVI   PN + Q KT+E DGY+A+Q+   +  E R
Sbjct  1    MTKGILGRKIGMTQIFAENGDLIPVTVIHATPNVVLQKKTIENDGYEAIQLGFEDISEKR  60

Query  61   VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKG  120
                Q GH AKA  A  R ++E R   A +   E+G  + VD+F+ G +VDVTG SKGKG
Sbjct  61   ANKPQIGHAAKANTAPKRFIREIR--GANINEYEVGQEVKVDIFSEGDIVDVTGISKGKG  118

Query  121  FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI  180
            FQG +KR         HG S  HR  GS G    P RVFK K + G +G ERVT+Q L+I
Sbjct  119  FQGAIKRHGQSRGPMAHG-SRYHRRPGSMGA-IAPNRVFKTKNLPGRMGGERVTIQNLKI  176

Query  181  VSIDAERSVLVVKGAIPGATGGDVIVRPTIKA  212
            V +D ER++L++KG +PG   G VIV+  +KA
Sbjct  177  VKVDPERNLLLIKGNVPGPRKGLVIVKSAVKA  208



Lambda      K        H        a         alpha
   0.319    0.137    0.392    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 787610


  Database: d3beac472cf828654c6a25ac6711a19b.SwissProt.fasta
    Posted date:  May 13, 2024  10:24 AM
  Number of letters in database: 5,837
  Number of sequences in database:  28



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40