BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 266c5f0acd237991955755a809c20b8e.TrEMBL.fasta
26 sequences; 5,142 total letters
Query= ACIAD3218
Length=206
Score E
Sequences producing significant alignments: (Bits) Value
A0A1L6KJR7 Large ribosomal subunit protein uL4 [Acinetobacter hae... 385 4e-142
A0A1P8EK95 Large ribosomal subunit protein uL4 [Acinetobacter soli] 384 1e-141
A0A7G2SHQ3 Large ribosomal subunit protein uL4 [Acinetobacter sp] 384 1e-141
A0A0M1I8E9 Large ribosomal subunit protein uL4 [Acinetobacter sp.... 384 1e-141
N9AIR9 Large ribosomal subunit protein uL4 [Acinetobacter soli NI... 384 1e-141
A0A5N7TX23 Large ribosomal subunit protein uL4 [Acinetobacter sp] 383 3e-141
A0A7S6YSU5 Large ribosomal subunit protein uL4 [Acinetobacter sp.... 383 3e-141
A0A009RA31 Large ribosomal subunit protein uL4 [Acinetobacter sp.... 383 3e-141
A0A3A8EVP0 Large ribosomal subunit protein uL4 [Acinetobacter gue... 382 6e-141
A0A427PTE1 Large ribosomal subunit protein uL4 [Acinetobacter sp.... 382 6e-141
A0A009YJK9 Large ribosomal subunit protein uL4 [Acinetobacter sp.... 382 6e-141
N9DJL8 Large ribosomal subunit protein uL4 [Acinetobacter ursingi... 382 6e-141
A0A3F3L1Z0 Large ribosomal subunit protein uL4 [Acinetobacter urs... 382 6e-141
A0A385F004 Large ribosomal subunit protein uL4 [Acinetobacter bau... 381 2e-140
A0A654L446 Large ribosomal subunit protein uL4 [Acinetobacter bau... 381 2e-140
A0A5K6CMY9 Large ribosomal subunit protein uL4 [Acinetobacter bau... 381 2e-140
A0A2Z6G110 Large ribosomal subunit protein uL4 [Moraxella catarrh... 267 8e-96
A0A2Z6G118 Large ribosomal subunit protein uL4 [Moraxella catarrh... 266 2e-95
A0A2Z6G135 Large ribosomal subunit protein uL4 [Moraxella catarrh... 263 2e-94
A0A0B3VDM3 Large ribosomal subunit protein uL4 [Francisella tular... 208 4e-72
D0FH59 Large ribosomal subunit protein uL4 [Staphylococcus epider... 149 9e-49
H9BQQ1 Large ribosomal subunit protein uL4 [Staphylococcus petten... 148 2e-48
D0FH61 Large ribosomal subunit protein uL4 [Staphylococcus epider... 148 2e-48
A0A063X8U6 Large ribosomal subunit protein uL4 [Bacillus subtilis] 148 2e-48
D0FH57 Large ribosomal subunit protein uL4 [Staphylococcus epider... 146 1e-47
D0FH60 Large ribosomal subunit protein uL4 [Staphylococcus epider... 146 1e-47
>A0A1L6KJR7 Large ribosomal subunit protein uL4 [Acinetobacter
haemolyticus]
Length=205
Score = 385 bits (990), Expect = 4e-142
Identities = 198/205 (97%), Positives = 201/205 (98%), Gaps = 0/205 (0%)
Query 1 LRGNNVNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGG 60
+RGN VNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRA KSRA+VSGGG
Sbjct 1 MRGNTVNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAHKSRADVSGGG 60
Query 61 KKPFRQKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQD 120
KKPFRQKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQD
Sbjct 61 KKPFRQKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQD 120
Query 121 RLVLVEEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAID 180
RLVLVEEFAVAAPKTKELLAKL DLNA RALI+TDAVDENLYLAARNLPHVDVVDATAID
Sbjct 121 RLVLVEEFAVAAPKTKELLAKLTDLNATRALIITDAVDENLYLAARNLPHVDVVDATAID 180
Query 181 PVSLIAFDKVVMSVAAAKKIEVELG 205
PVSLIAFDKVVMSVAAAKKIEVELG
Sbjct 181 PVSLIAFDKVVMSVAAAKKIEVELG 205
>A0A1P8EK95 Large ribosomal subunit protein uL4 [Acinetobacter
soli]
Length=200
Score = 384 bits (987), Expect = 1e-141
Identities = 199/200 (99%), Positives = 200/200 (100%), Gaps = 0/200 (0%)
Query 6 VNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR 65
+NLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR
Sbjct 1 MNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR 60
Query 66 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 125
QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV
Sbjct 61 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 120
Query 126 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI 185
EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI
Sbjct 121 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI 180
Query 186 AFDKVVMSVAAAKKIEVELG 205
AFDKVVMSVAAAKKIEVELG
Sbjct 181 AFDKVVMSVAAAKKIEVELG 200
>A0A7G2SHQ3 Large ribosomal subunit protein uL4 [Acinetobacter
sp]
Length=200
Score = 384 bits (987), Expect = 1e-141
Identities = 199/200 (99%), Positives = 200/200 (100%), Gaps = 0/200 (0%)
Query 6 VNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR 65
+NLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR
Sbjct 1 MNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR 60
Query 66 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 125
QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV
Sbjct 61 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 120
Query 126 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI 185
EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI
Sbjct 121 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI 180
Query 186 AFDKVVMSVAAAKKIEVELG 205
AFDKVVMSVAAAKKIEVELG
Sbjct 181 AFDKVVMSVAAAKKIEVELG 200
>A0A0M1I8E9 Large ribosomal subunit protein uL4 [Acinetobacter
sp. C15]
Length=200
Score = 384 bits (987), Expect = 1e-141
Identities = 199/200 (99%), Positives = 200/200 (100%), Gaps = 0/200 (0%)
Query 6 VNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR 65
+NLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR
Sbjct 1 MNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR 60
Query 66 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 125
QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV
Sbjct 61 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 120
Query 126 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI 185
EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI
Sbjct 121 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI 180
Query 186 AFDKVVMSVAAAKKIEVELG 205
AFDKVVMSVAAAKKIEVELG
Sbjct 181 AFDKVVMSVAAAKKIEVELG 200
>N9AIR9 Large ribosomal subunit protein uL4 [Acinetobacter soli
NIPH 2899]
Length=200
Score = 384 bits (987), Expect = 1e-141
Identities = 199/200 (99%), Positives = 200/200 (100%), Gaps = 0/200 (0%)
Query 6 VNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR 65
+NLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR
Sbjct 1 MNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR 60
Query 66 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 125
QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV
Sbjct 61 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 120
Query 126 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI 185
EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI
Sbjct 121 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI 180
Query 186 AFDKVVMSVAAAKKIEVELG 205
AFDKVVMSVAAAKKIEVELG
Sbjct 181 AFDKVVMSVAAAKKIEVELG 200
>A0A5N7TX23 Large ribosomal subunit protein uL4 [Acinetobacter
sp]
Length=200
Score = 383 bits (984), Expect = 3e-141
Identities = 198/200 (99%), Positives = 200/200 (100%), Gaps = 0/200 (0%)
Query 6 VNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR 65
+NLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRA+VSGGGKKPFR
Sbjct 1 MNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRADVSGGGKKPFR 60
Query 66 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 125
QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV
Sbjct 61 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 120
Query 126 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI 185
EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI
Sbjct 121 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI 180
Query 186 AFDKVVMSVAAAKKIEVELG 205
AFDKVVMSVAAAKKIEVELG
Sbjct 181 AFDKVVMSVAAAKKIEVELG 200
>A0A7S6YSU5 Large ribosomal subunit protein uL4 [Acinetobacter
sp. Ac-14]
Length=200
Score = 383 bits (984), Expect = 3e-141
Identities = 198/200 (99%), Positives = 200/200 (100%), Gaps = 0/200 (0%)
Query 6 VNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR 65
+NLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRA+VSGGGKKPFR
Sbjct 1 MNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRADVSGGGKKPFR 60
Query 66 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 125
QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV
Sbjct 61 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 120
Query 126 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI 185
EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI
Sbjct 121 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI 180
Query 186 AFDKVVMSVAAAKKIEVELG 205
AFDKVVMSVAAAKKIEVELG
Sbjct 181 AFDKVVMSVAAAKKIEVELG 200
>A0A009RA31 Large ribosomal subunit protein uL4 [Acinetobacter
sp. 809848]
Length=200
Score = 383 bits (984), Expect = 3e-141
Identities = 198/200 (99%), Positives = 200/200 (100%), Gaps = 0/200 (0%)
Query 6 VNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR 65
+NLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRA+VSGGGKKPFR
Sbjct 1 MNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRADVSGGGKKPFR 60
Query 66 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 125
QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV
Sbjct 61 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 120
Query 126 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI 185
EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI
Sbjct 121 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI 180
Query 186 AFDKVVMSVAAAKKIEVELG 205
AFDKVVMSVAAAKKIEVELG
Sbjct 181 AFDKVVMSVAAAKKIEVELG 200
>A0A3A8EVP0 Large ribosomal subunit protein uL4 [Acinetobacter
guerrae]
Length=200
Score = 382 bits (982), Expect = 6e-141
Identities = 198/200 (99%), Positives = 199/200 (99%), Gaps = 0/200 (0%)
Query 6 VNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR 65
+NLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR
Sbjct 1 MNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR 60
Query 66 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 125
QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV
Sbjct 61 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 120
Query 126 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI 185
EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDA AIDPVSLI
Sbjct 121 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDAAAIDPVSLI 180
Query 186 AFDKVVMSVAAAKKIEVELG 205
AFDKVVMSVAAAKKIEVELG
Sbjct 181 AFDKVVMSVAAAKKIEVELG 200
>A0A427PTE1 Large ribosomal subunit protein uL4 [Acinetobacter
sp. FDAARGOS_515]
Length=200
Score = 382 bits (982), Expect = 6e-141
Identities = 198/200 (99%), Positives = 199/200 (99%), Gaps = 0/200 (0%)
Query 6 VNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR 65
+NLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR
Sbjct 1 MNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR 60
Query 66 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 125
QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV
Sbjct 61 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 120
Query 126 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI 185
EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDA AIDPVSLI
Sbjct 121 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDAAAIDPVSLI 180
Query 186 AFDKVVMSVAAAKKIEVELG 205
AFDKVVMSVAAAKKIEVELG
Sbjct 181 AFDKVVMSVAAAKKIEVELG 200
>A0A009YJK9 Large ribosomal subunit protein uL4 [Acinetobacter
sp. 479375]
Length=200
Score = 382 bits (982), Expect = 6e-141
Identities = 198/200 (99%), Positives = 199/200 (99%), Gaps = 0/200 (0%)
Query 6 VNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR 65
+NLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR
Sbjct 1 MNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR 60
Query 66 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 125
QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV
Sbjct 61 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 120
Query 126 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI 185
EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDA AIDPVSLI
Sbjct 121 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDAAAIDPVSLI 180
Query 186 AFDKVVMSVAAAKKIEVELG 205
AFDKVVMSVAAAKKIEVELG
Sbjct 181 AFDKVVMSVAAAKKIEVELG 200
>N9DJL8 Large ribosomal subunit protein uL4 [Acinetobacter ursingii
ANC 3649]
Length=200
Score = 382 bits (982), Expect = 6e-141
Identities = 198/200 (99%), Positives = 199/200 (99%), Gaps = 0/200 (0%)
Query 6 VNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR 65
+NLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR
Sbjct 1 MNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR 60
Query 66 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 125
QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV
Sbjct 61 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 120
Query 126 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI 185
EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDA AIDPVSLI
Sbjct 121 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDAAAIDPVSLI 180
Query 186 AFDKVVMSVAAAKKIEVELG 205
AFDKVVMSVAAAKKIEVELG
Sbjct 181 AFDKVVMSVAAAKKIEVELG 200
>A0A3F3L1Z0 Large ribosomal subunit protein uL4 [Acinetobacter
ursingii]
Length=200
Score = 382 bits (982), Expect = 6e-141
Identities = 198/200 (99%), Positives = 199/200 (99%), Gaps = 0/200 (0%)
Query 6 VNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR 65
+NLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR
Sbjct 1 MNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR 60
Query 66 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 125
QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV
Sbjct 61 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 120
Query 126 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI 185
EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDA AIDPVSLI
Sbjct 121 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDAAAIDPVSLI 180
Query 186 AFDKVVMSVAAAKKIEVELG 205
AFDKVVMSVAAAKKIEVELG
Sbjct 181 AFDKVVMSVAAAKKIEVELG 200
>A0A385F004 Large ribosomal subunit protein uL4 [Acinetobacter
baumannii WM99c]
Length=200
Score = 381 bits (979), Expect = 2e-140
Identities = 197/200 (99%), Positives = 199/200 (99%), Gaps = 0/200 (0%)
Query 6 VNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR 65
+NLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRA KSRA+VSGGGKKPFR
Sbjct 1 MNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAHKSRADVSGGGKKPFR 60
Query 66 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 125
QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV
Sbjct 61 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 120
Query 126 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI 185
EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI
Sbjct 121 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI 180
Query 186 AFDKVVMSVAAAKKIEVELG 205
AFDKVVMSVAAAKKIEVELG
Sbjct 181 AFDKVVMSVAAAKKIEVELG 200
>A0A654L446 Large ribosomal subunit protein uL4 [Acinetobacter
baumannii (strain MDR-ZJ06)]
Length=200
Score = 381 bits (979), Expect = 2e-140
Identities = 197/200 (99%), Positives = 199/200 (99%), Gaps = 0/200 (0%)
Query 6 VNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR 65
+NLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRA KSRA+VSGGGKKPFR
Sbjct 1 MNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAHKSRADVSGGGKKPFR 60
Query 66 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 125
QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV
Sbjct 61 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 120
Query 126 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI 185
EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI
Sbjct 121 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI 180
Query 186 AFDKVVMSVAAAKKIEVELG 205
AFDKVVMSVAAAKKIEVELG
Sbjct 181 AFDKVVMSVAAAKKIEVELG 200
>A0A5K6CMY9 Large ribosomal subunit protein uL4 [Acinetobacter
baumannii (strain AB307-0294)]
Length=200
Score = 381 bits (979), Expect = 2e-140
Identities = 197/200 (99%), Positives = 199/200 (99%), Gaps = 0/200 (0%)
Query 6 VNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFR 65
+NLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRA KSRA+VSGGGKKPFR
Sbjct 1 MNLKTVSGSAVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAHKSRADVSGGGKKPFR 60
Query 66 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 125
QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV
Sbjct 61 QKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLV 120
Query 126 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI 185
EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI
Sbjct 121 EEFAVAAPKTKELLAKLNDLNAARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLI 180
Query 186 AFDKVVMSVAAAKKIEVELG 205
AFDKVVMSVAAAKKIEVELG
Sbjct 181 AFDKVVMSVAAAKKIEVELG 200
>A0A2Z6G110 Large ribosomal subunit protein uL4 [Moraxella catarrhalis]
Length=164
Score = 267 bits (682), Expect = 8e-96
Identities = 131/164 (80%), Positives = 151/164 (92%), Gaps = 0/164 (0%)
Query 34 QVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFRQKGTGRARAGSIRSPIWVGGGKTFAARP 93
QVVTAYLAG RQGTRAQK+R EVSGGGKKP+R+KGTGRARAGSIRSPIWVGGG+ FAA+P
Sbjct 1 QVVTAYLAGARQGTRAQKTRGEVSGGGKKPWRRKGTGRARAGSIRSPIWVGGGRAFAAKP 60
Query 94 QDWSQKVNRKMYRGAMQCILAELVRQDRLVLVEEFAVAAPKTKELLAKLNDLNAARALIV 153
QDWSQKVNRKMYRGAMQCILAELVRQ+RLVLV++ AV+APKTKEL+AKL +LNA RALIV
Sbjct 61 QDWSQKVNRKMYRGAMQCILAELVRQERLVLVDDIAVSAPKTKELIAKLAELNAPRALIV 120
Query 154 TDAVDENLYLAARNLPHVDVVDATAIDPVSLIAFDKVVMSVAAA 197
T VDENLYLAARN+P+V+V+ +DPVSL++FDKV+M+V AA
Sbjct 121 THEVDENLYLAARNIPYVNVLGTREVDPVSLVSFDKVIMTVEAA 164
>A0A2Z6G118 Large ribosomal subunit protein uL4 [Moraxella catarrhalis]
Length=162
Score = 266 bits (679), Expect = 2e-95
Identities = 130/161 (81%), Positives = 149/161 (93%), Gaps = 0/161 (0%)
Query 34 QVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFRQKGTGRARAGSIRSPIWVGGGKTFAARP 93
QVVTAYLAG RQGTRAQK+R EVSGGGKKP+RQKGTGRARAGSIRSPIWVGGG+ FAA+P
Sbjct 1 QVVTAYLAGARQGTRAQKTRGEVSGGGKKPWRQKGTGRARAGSIRSPIWVGGGRAFAAKP 60
Query 94 QDWSQKVNRKMYRGAMQCILAELVRQDRLVLVEEFAVAAPKTKELLAKLNDLNAARALIV 153
QDWSQKVNRKMYRGAMQCILAELVRQ+RLVLV++ AV+APKTKEL+AKL +LNA RALIV
Sbjct 61 QDWSQKVNRKMYRGAMQCILAELVRQERLVLVDDIAVSAPKTKELIAKLAELNAPRALIV 120
Query 154 TDAVDENLYLAARNLPHVDVVDATAIDPVSLIAFDKVVMSV 194
T VDENLYLAARN+P+V+V+ +DPVSL++FDKV+M+V
Sbjct 121 THEVDENLYLAARNIPYVNVLGTREVDPVSLVSFDKVIMTV 161
>A0A2Z6G135 Large ribosomal subunit protein uL4 [Moraxella catarrhalis]
Length=161
Score = 263 bits (673), Expect = 2e-94
Identities = 129/161 (80%), Positives = 148/161 (92%), Gaps = 0/161 (0%)
Query 34 QVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFRQKGTGRARAGSIRSPIWVGGGKTFAARP 93
QVVTAYLAG RQGTRAQK+R EVSGGGKKP+RQKGT RARAGSIRSPIWVGGG+ FAA+P
Sbjct 1 QVVTAYLAGARQGTRAQKTRGEVSGGGKKPWRQKGTARARAGSIRSPIWVGGGRAFAAKP 60
Query 94 QDWSQKVNRKMYRGAMQCILAELVRQDRLVLVEEFAVAAPKTKELLAKLNDLNAARALIV 153
QDWSQKVNRKMYRGAMQCILAELVRQ+RLVLV++ AV+APKTKEL+AKL +LNA RALIV
Sbjct 61 QDWSQKVNRKMYRGAMQCILAELVRQERLVLVDDIAVSAPKTKELIAKLAELNAPRALIV 120
Query 154 TDAVDENLYLAARNLPHVDVVDATAIDPVSLIAFDKVVMSV 194
T VDENLYLAARN+P+V+V+ +DPVSL++FDKV+M+V
Sbjct 121 THEVDENLYLAARNIPYVNVLGTREVDPVSLVSFDKVIMTV 161
>A0A0B3VDM3 Large ribosomal subunit protein uL4 [Francisella tularensis
subsp. holarctica]
Length=207
Score = 208 bits (530), Expect = 4e-72
Identities = 106/205 (52%), Positives = 152/205 (74%), Gaps = 5/205 (2%)
Query 5 NVNLKTVSGS---AVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGK 61
++N+K+++G ++ ++E F ++NEAL+HQVV AY+AG RQGT+AQK+R+EVSGGG
Sbjct 2 DLNIKSLAGQEAGSLGVAEGVFAADYNEALIHQVVVAYMAGARQGTKAQKTRSEVSGGGA 61
Query 62 KPFRQKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDR 121
KP+RQKGTGRARAG+IRSPI+ GG TFAA+P+ + QKVNRKMY GA++ IL+EL+R R
Sbjct 62 KPWRQKGTGRARAGTIRSPIFRKGGVTFAAKPKSYKQKVNRKMYSGAVKSILSELLRSGR 121
Query 122 LVLVEEFAVAAPKTKELLAKLNDLNAARALIV--TDAVDENLYLAARNLPHVDVVDATAI 179
+ +VEE + PKT+E + ++ L L V + ENLYL++RNL +V V D+ I
Sbjct 122 MTIVEELKLETPKTREFKSVIDSLGVKDVLFVVGVEEFSENLYLSSRNLKNVAVCDSVEI 181
Query 180 DPVSLIAFDKVVMSVAAAKKIEVEL 204
+PVSL+ F+ VV++ A K+IE +L
Sbjct 182 NPVSLVCFENVVLTKKAIKEIEEKL 206
>D0FH59 Large ribosomal subunit protein uL4 [Staphylococcus epidermidis]
Length=207
Score = 149 bits (376), Expect = 9e-49
Identities = 82/201 (41%), Positives = 126/201 (63%), Gaps = 4/201 (2%)
Query 5 NVNLKTVSGS---AVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGK 61
N ++ V GS +VEL++ F E N +++ + + A RQGT A K+R+ V GGG+
Sbjct 3 NYDVLKVDGSKSGSVELNDAVFAIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVRGGGR 62
Query 62 KPFRQKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDR 121
KP+RQKGTGRAR G+IR+P W GGG F P+ ++ K+ +KM R A++ L+ V+++
Sbjct 63 KPWRQKGTGRARQGTIRAPQWRGGGVVFGPTPRSYAYKMPKKMRRLALRSALSFKVQENS 122
Query 122 LVLVEEFAVAAPKTKELLAKLNDL-NAARALIVTDAVDENLYLAARNLPHVDVVDATAID 180
+V+ F APKTKE L L + L+VT++ D N+ L+ARN+P V V A ++
Sbjct 123 FTIVDTFGFEAPKTKEFKNVLTTLEQPKKVLVVTESEDVNVELSARNIPGVQVTTAQGLN 182
Query 181 PVSLIAFDKVVMSVAAAKKIE 201
+ L + D V+++ AAAKK+E
Sbjct 183 VLDLTSADSVIITEAAAKKVE 203
>H9BQQ1 Large ribosomal subunit protein uL4 [Staphylococcus pettenkoferi]
Length=207
Score = 148 bits (374), Expect = 2e-48
Identities = 83/205 (40%), Positives = 128/205 (62%), Gaps = 4/205 (2%)
Query 5 NVNLKTVSGS---AVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGK 61
N ++ V+GS +VEL++ F E N ++ + + A RQGT + K+R+EV GGG+
Sbjct 3 NYDVVKVNGSKSGSVELNDAVFAIEPNNDVLFEAINLQRASLRQGTHSVKNRSEVRGGGR 62
Query 62 KPFRQKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDR 121
KP+RQKGTGRAR G+IR+P W GGG F P+ +S K+ +KM R A++ L+ V+++
Sbjct 63 KPWRQKGTGRARQGTIRAPQWRGGGIVFGPTPRSYSYKMPKKMRRLALRSALSYKVQENG 122
Query 122 LVLVEEFAVAAPKTKELLAKLNDL-NAARALIVTDAVDENLYLAARNLPHVDVVDATAID 180
+V+ F APKTKE L +L + L+V + D N+ L+ARN+P V V A ++
Sbjct 123 FTVVDAFNFDAPKTKEFKNVLTNLEQPKKVLVVVEGEDVNVELSARNIPGVQVTTAEGLN 182
Query 181 PVSLIAFDKVVMSVAAAKKIEVELG 205
+ + + D V+++ AAAKK+E LG
Sbjct 183 VLDISSADSVIITEAAAKKVEEVLG 207
>D0FH61 Large ribosomal subunit protein uL4 [Staphylococcus epidermidis]
Length=207
Score = 148 bits (373), Expect = 2e-48
Identities = 82/201 (41%), Positives = 125/201 (62%), Gaps = 4/201 (2%)
Query 5 NVNLKTVSGS---AVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGK 61
N ++ V GS +VEL++ F E N +++ + + A RQGT A K+R+ V GGG+
Sbjct 3 NYDVLKVDGSKSGSVELNDAVFAIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVRGGGR 62
Query 62 KPFRQKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDR 121
KP+RQKGTGRAR G+IR+P W GGG F P+ ++ K+ +KM R A++ L+ V+++
Sbjct 63 KPWRQKGTGRARQGTIRAPQWRGGGVVFGPTPRSYAYKMPKKMRRLALRSALSFKVQENS 122
Query 122 LVLVEEFAVAAPKTKELLAKLNDL-NAARALIVTDAVDENLYLAARNLPHVDVVDATAID 180
+V+ F APKTKE L L + L+VT+ D N+ L+ARN+P V V A ++
Sbjct 123 FTIVDTFGFEAPKTKEFKNVLTTLEQPKKVLVVTENEDVNVELSARNIPGVQVTTAQGLN 182
Query 181 PVSLIAFDKVVMSVAAAKKIE 201
+ L + D V+++ AAAKK+E
Sbjct 183 VLDLTSADSVIITEAAAKKVE 203
>A0A063X8U6 Large ribosomal subunit protein uL4 [Bacillus subtilis]
Length=207
Score = 148 bits (373), Expect = 2e-48
Identities = 79/187 (42%), Positives = 123/187 (66%), Gaps = 1/187 (1%)
Query 16 VELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGKKPFRQKGTGRARAG 75
+EL+ FG E NE++V + A RQGT K+R+EV GGG+KP+RQKGTGRAR G
Sbjct 17 IELNASVFGIEPNESVVFDAILMQRASLRQGTHKVKNRSEVRGGGRKPWRQKGTGRARQG 76
Query 76 SIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDRLVLVEEFAVAAPKT 135
SIRSP W GGG F P+ +S K+ +K+ R A++ +L+ V + ++++E+ + KT
Sbjct 77 SIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAIKSVLSSKVIDNNIIVLEDLTLDTAKT 136
Query 136 KELLAKLNDLNA-ARALIVTDAVDENLYLAARNLPHVDVVDATAIDPVSLIAFDKVVMSV 194
KE+ A L L+ +ALIVT +E + L+ARN+P V VV+A I+ + ++ +K++++
Sbjct 137 KEMAAILKGLSVEKKALIVTADANEAVALSARNIPGVTVVEANGINVLDVVNHEKLLITK 196
Query 195 AAAKKIE 201
AA +K+E
Sbjct 197 AAVEKVE 203
>D0FH57 Large ribosomal subunit protein uL4 [Staphylococcus epidermidis]
Length=207
Score = 146 bits (368), Expect = 1e-47
Identities = 81/201 (40%), Positives = 124/201 (62%), Gaps = 4/201 (2%)
Query 5 NVNLKTVSGS---AVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGK 61
N ++ V GS +VEL++ F E N +++ + + A RQGT A K+R+ V GGG+
Sbjct 3 NYDVLKVDGSKSGSVELNDAVFAIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVRGGGR 62
Query 62 KPFRQKGTGRARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQDR 121
KP+RQ GTGRAR G+IR+P W GGG F P+ ++ K+ +KM R A++ L+ V+++
Sbjct 63 KPWRQNGTGRARQGTIRAPQWRGGGVVFGPTPRSYAYKMPKKMRRLALRSALSFKVQENS 122
Query 122 LVLVEEFAVAAPKTKELLAKLNDL-NAARALIVTDAVDENLYLAARNLPHVDVVDATAID 180
+V+ F APKTKE L L + L+VT+ D N+ L+ARN+P V V A ++
Sbjct 123 FTIVDTFGFEAPKTKEFKNVLTTLEQPKKVLVVTENEDVNVELSARNIPGVQVTTAQGLN 182
Query 181 PVSLIAFDKVVMSVAAAKKIE 201
+ L + D V+++ AAAKK+E
Sbjct 183 VLDLTSADSVIITEAAAKKVE 203
>D0FH60 Large ribosomal subunit protein uL4 [Staphylococcus epidermidis]
Length=208
Score = 146 bits (368), Expect = 1e-47
Identities = 82/202 (41%), Positives = 126/202 (62%), Gaps = 5/202 (2%)
Query 5 NVNLKTVSGS---AVELSEVAFGREFNEALVHQVVTAYLAGGRQGTRAQKSRAEVSGGGK 61
N ++ V GS +VEL++ F E N +++ + + A RQGT A K+R+ V GGG+
Sbjct 3 NYDVLKVDGSKSGSVELNDAVFAIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVRGGGR 62
Query 62 KPFRQKGTG-RARAGSIRSPIWVGGGKTFAARPQDWSQKVNRKMYRGAMQCILAELVRQD 120
KP+RQKGTG RAR G+IR+P W GGG F P+ ++ K+ +KM R A++ L+ V+++
Sbjct 63 KPWRQKGTGGRARQGTIRAPQWRGGGVVFGPTPRSYAYKMPKKMRRSALRSALSFKVQEN 122
Query 121 RLVLVEEFAVAAPKTKELLAKLNDL-NAARALIVTDAVDENLYLAARNLPHVDVVDATAI 179
+V+ F APKTKE L L + L+VT++ D N+ L+ARN+P V V A +
Sbjct 123 SFTIVDTFGFEAPKTKEFKNVLTTLEQPKKVLVVTESEDVNVELSARNIPGVQVTTAQGL 182
Query 180 DPVSLIAFDKVVMSVAAAKKIE 201
+ + L + D V+++ AAAKK+E
Sbjct 183 NVLDLTSADSVIITEAAAKKVE 204
Lambda K H a alpha
0.320 0.134 0.378 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 664200
Database: 266c5f0acd237991955755a809c20b8e.TrEMBL.fasta
Posted date: May 11, 2024 2:15 PM
Number of letters in database: 5,142
Number of sequences in database: 26
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40