BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 7a14ee550ce5d9c5da1b97cd2e73342d.TrEMBL.fasta
15 sequences; 1,952 total letters
Query= ACIAD3196
Length=129
Score E
Sequences producing significant alignments: (Bits) Value
A0A7D4X5K9 Small ribosomal subunit protein uS11 [Acinetobacter sp... 258 2e-94
N9MQH4 Small ribosomal subunit protein uS11 [Acinetobacter variab... 258 2e-94
A0A385C7N1 Small ribosomal subunit protein uS11 [Acinetobacter wu... 258 2e-94
A0A062C259 Small ribosomal subunit protein uS11 [Acinetobacter sp... 258 2e-94
A0A4R0F9S8 Small ribosomal subunit protein uS11 [Acinetobacter sp... 258 2e-94
E2RXU4 Small ribosomal subunit protein uS11 [Pseudomonas aeruginosa] 220 2e-79
A0A8B6X0Z0 Small ribosomal subunit protein uS11 [Derxia gummosa D... 206 5e-74
A0A5I5F5V9 Small ribosomal subunit protein uS11 [Salmonella enter... 204 2e-73
C3SR57 Small ribosomal subunit protein uS11 [Escherichia coli] 204 3e-73
S1ELC2 Small ribosomal subunit protein uS11 [Escherichia coli KTE73] 204 3e-73
A0A1B0V5T6 Small ribosomal subunit protein uS11c [Cytinus hypocis... 118 4e-39
A0A2R4PAJ5 Small ribosomal subunit protein uS11c [Sciaphila thaid... 81.3 9e-25
A0A4Y5QLB5 Ribosomal protein S11 [Chlorops oryzae] 78.6 7e-24
Q56J82 S14e ribosomal protein-like protein [Philodina sp. NPS-2005] 79.3 1e-23
A0A2R8Y811 Ribosomal protein S14 [Homo sapiens] 79.0 2e-23
>A0A7D4X5K9 Small ribosomal subunit protein uS11 [Acinetobacter
sp. FDAARGOS_724]
Length=128
Score = 258 bits (658), Expect = 2e-94
Identities = 128/128 (100%), Positives = 128/128 (100%), Gaps = 0/128 (0%)
Query 1 MAKDTRTRKKVTRTVSEGVAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTPF 60
MAKDTRTRKKVTRTVSEGVAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTPF
Sbjct 1 MAKDTRTRKKVTRTVSEGVAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTPF 60
Query 61 AAQVAAEVAGKAALDYGLKNLDVLVKGPGPGRESAVRALGAVGYKINSITDVTPIPHNGC 120
AAQVAAEVAGKAALDYGLKNLDVLVKGPGPGRESAVRALGAVGYKINSITDVTPIPHNGC
Sbjct 61 AAQVAAEVAGKAALDYGLKNLDVLVKGPGPGRESAVRALGAVGYKINSITDVTPIPHNGC 120
Query 121 RPPKKRRV 128
RPPKKRRV
Sbjct 121 RPPKKRRV 128
>N9MQH4 Small ribosomal subunit protein uS11 [Acinetobacter variabilis]
Length=128
Score = 258 bits (658), Expect = 2e-94
Identities = 128/128 (100%), Positives = 128/128 (100%), Gaps = 0/128 (0%)
Query 1 MAKDTRTRKKVTRTVSEGVAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTPF 60
MAKDTRTRKKVTRTVSEGVAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTPF
Sbjct 1 MAKDTRTRKKVTRTVSEGVAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTPF 60
Query 61 AAQVAAEVAGKAALDYGLKNLDVLVKGPGPGRESAVRALGAVGYKINSITDVTPIPHNGC 120
AAQVAAEVAGKAALDYGLKNLDVLVKGPGPGRESAVRALGAVGYKINSITDVTPIPHNGC
Sbjct 61 AAQVAAEVAGKAALDYGLKNLDVLVKGPGPGRESAVRALGAVGYKINSITDVTPIPHNGC 120
Query 121 RPPKKRRV 128
RPPKKRRV
Sbjct 121 RPPKKRRV 128
>A0A385C7N1 Small ribosomal subunit protein uS11 [Acinetobacter
wuhouensis]
Length=128
Score = 258 bits (658), Expect = 2e-94
Identities = 128/128 (100%), Positives = 128/128 (100%), Gaps = 0/128 (0%)
Query 1 MAKDTRTRKKVTRTVSEGVAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTPF 60
MAKDTRTRKKVTRTVSEGVAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTPF
Sbjct 1 MAKDTRTRKKVTRTVSEGVAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTPF 60
Query 61 AAQVAAEVAGKAALDYGLKNLDVLVKGPGPGRESAVRALGAVGYKINSITDVTPIPHNGC 120
AAQVAAEVAGKAALDYGLKNLDVLVKGPGPGRESAVRALGAVGYKINSITDVTPIPHNGC
Sbjct 61 AAQVAAEVAGKAALDYGLKNLDVLVKGPGPGRESAVRALGAVGYKINSITDVTPIPHNGC 120
Query 121 RPPKKRRV 128
RPPKKRRV
Sbjct 121 RPPKKRRV 128
>A0A062C259 Small ribosomal subunit protein uS11 [Acinetobacter
sp. 263903-1]
Length=128
Score = 258 bits (658), Expect = 2e-94
Identities = 128/128 (100%), Positives = 128/128 (100%), Gaps = 0/128 (0%)
Query 1 MAKDTRTRKKVTRTVSEGVAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTPF 60
MAKDTRTRKKVTRTVSEGVAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTPF
Sbjct 1 MAKDTRTRKKVTRTVSEGVAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTPF 60
Query 61 AAQVAAEVAGKAALDYGLKNLDVLVKGPGPGRESAVRALGAVGYKINSITDVTPIPHNGC 120
AAQVAAEVAGKAALDYGLKNLDVLVKGPGPGRESAVRALGAVGYKINSITDVTPIPHNGC
Sbjct 61 AAQVAAEVAGKAALDYGLKNLDVLVKGPGPGRESAVRALGAVGYKINSITDVTPIPHNGC 120
Query 121 RPPKKRRV 128
RPPKKRRV
Sbjct 121 RPPKKRRV 128
>A0A4R0F9S8 Small ribosomal subunit protein uS11 [Acinetobacter
sp. ANC 3781]
Length=128
Score = 258 bits (658), Expect = 2e-94
Identities = 128/128 (100%), Positives = 128/128 (100%), Gaps = 0/128 (0%)
Query 1 MAKDTRTRKKVTRTVSEGVAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTPF 60
MAKDTRTRKKVTRTVSEGVAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTPF
Sbjct 1 MAKDTRTRKKVTRTVSEGVAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTPF 60
Query 61 AAQVAAEVAGKAALDYGLKNLDVLVKGPGPGRESAVRALGAVGYKINSITDVTPIPHNGC 120
AAQVAAEVAGKAALDYGLKNLDVLVKGPGPGRESAVRALGAVGYKINSITDVTPIPHNGC
Sbjct 61 AAQVAAEVAGKAALDYGLKNLDVLVKGPGPGRESAVRALGAVGYKINSITDVTPIPHNGC 120
Query 121 RPPKKRRV 128
RPPKKRRV
Sbjct 121 RPPKKRRV 128
>E2RXU4 Small ribosomal subunit protein uS11 [Pseudomonas aeruginosa]
Length=129
Score = 220 bits (560), Expect = 2e-79
Identities = 111/129 (86%), Positives = 117/129 (91%), Gaps = 1/129 (1%)
Query 1 MAKDT-RTRKKVTRTVSEGVAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTP 59
MAK R RKKV +TV +G+AHIHASFNNTIVTITDRQGNAL+WATSGG GFRGSRKSTP
Sbjct 1 MAKPAARPRKKVKKTVVDGIAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSRKSTP 60
Query 60 FAAQVAAEVAGKAALDYGLKNLDVLVKGPGPGRESAVRALGAVGYKINSITDVTPIPHNG 119
FAAQVAAE AG+AAL+YGLKNLDV VKGPGPGRESAVRAL A GYKI SITDVTPIPHNG
Sbjct 61 FAAQVAAERAGQAALEYGLKNLDVNVKGPGPGRESAVRALNACGYKIASITDVTPIPHNG 120
Query 120 CRPPKKRRV 128
CRPPKKRRV
Sbjct 121 CRPPKKRRV 129
>A0A8B6X0Z0 Small ribosomal subunit protein uS11 [Derxia gummosa
DSM 723]
Length=134
Score = 206 bits (525), Expect = 5e-74
Identities = 95/127 (75%), Positives = 112/127 (88%), Gaps = 0/127 (0%)
Query 2 AKDTRTRKKVTRTVSEGVAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTPFA 61
A R RKKV + V+EG+AH+HASFNNTI+TITDRQGNAL+WATSGGQGF+GSRKSTPFA
Sbjct 8 AASQRARKKVRKNVAEGIAHVHASFNNTIITITDRQGNALSWATSGGQGFKGSRKSTPFA 67
Query 62 AQVAAEVAGKAALDYGLKNLDVLVKGPGPGRESAVRALGAVGYKINSITDVTPIPHNGCR 121
AQVAAE AG+ AL+ G+KNL+V +KGPGPGRESAVRAL ++G KI I DVTP+PHNGCR
Sbjct 68 AQVAAESAGRVALECGIKNLEVRIKGPGPGRESAVRALNSLGIKITQIADVTPVPHNGCR 127
Query 122 PPKKRRV 128
PPK+RR+
Sbjct 128 PPKRRRI 134
>A0A5I5F5V9 Small ribosomal subunit protein uS11 [Salmonella enterica
subsp. enterica serovar Telelkebir]
Length=129
Score = 204 bits (520), Expect = 2e-73
Identities = 99/129 (77%), Positives = 111/129 (86%), Gaps = 1/129 (1%)
Query 1 MAK-DTRTRKKVTRTVSEGVAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTP 59
MAK R RK+V + VS+GVAHIHASFNNTIVTITDRQGNAL WAT+GG GFRGSRKSTP
Sbjct 1 MAKAPVRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTP 60
Query 60 FAAQVAAEVAGKAALDYGLKNLDVLVKGPGPGRESAVRALGAVGYKINSITDVTPIPHNG 119
FAAQVAAE A +YG+KNL+V+VKGPGPGRES +RAL A G++I +ITDVTPIPHNG
Sbjct 61 FAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG 120
Query 120 CRPPKKRRV 128
CRPPKKRRV
Sbjct 121 CRPPKKRRV 129
>C3SR57 Small ribosomal subunit protein uS11 [Escherichia coli]
Length=129
Score = 204 bits (519), Expect = 3e-73
Identities = 96/123 (78%), Positives = 108/123 (88%), Gaps = 0/123 (0%)
Query 6 RTRKKVTRTVSEGVAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTPFAAQVA 65
R RK+V + VS+GVAHIHASFNNTIVTITDRQGNAL WAT+GG GFRGSRKSTPFAAQVA
Sbjct 7 RARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPFAAQVA 66
Query 66 AEVAGKAALDYGLKNLDVLVKGPGPGRESAVRALGAVGYKINSITDVTPIPHNGCRPPKK 125
AE A +YG+KNL+V+VKGPGPGRES +RAL A G++I +ITDVTPIPHNGCRPPKK
Sbjct 67 AERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNGCRPPKK 126
Query 126 RRV 128
RRV
Sbjct 127 RRV 129
>S1ELC2 Small ribosomal subunit protein uS11 [Escherichia coli
KTE73]
Length=129
Score = 204 bits (519), Expect = 3e-73
Identities = 96/123 (78%), Positives = 108/123 (88%), Gaps = 0/123 (0%)
Query 6 RTRKKVTRTVSEGVAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTPFAAQVA 65
R RK+V + VS+GVAHIHASFNNTIVTITDRQGNAL WAT+GG GFRGSRKSTPFAAQVA
Sbjct 7 RARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPFAAQVA 66
Query 66 AEVAGKAALDYGLKNLDVLVKGPGPGRESAVRALGAVGYKINSITDVTPIPHNGCRPPKK 125
AE A +YG+KNL+V+VKGPGPGRES +RAL A G++I +ITDVTPIPHNGCRPPKK
Sbjct 67 AERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNGCRPPKK 126
Query 126 RRV 128
RRV
Sbjct 127 RRV 129
>A0A1B0V5T6 Small ribosomal subunit protein uS11c [Cytinus hypocistis]
Length=140
Score = 118 bits (296), Expect = 4e-39
Identities = 53/112 (47%), Positives = 79/112 (71%), Gaps = 0/112 (0%)
Query 17 EGVAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTPFAAQVAAEVAGKAALDY 76
+G HI ASFNNTI+T+TD G + W+++G G + +R+ TP AA++A E +A +
Sbjct 29 KGAIHIQASFNNTIITLTDICGKVIYWSSAGTCGLKSARRKTPLAAKIATENIIRAVKNK 88
Query 77 GLKNLDVLVKGPGPGRESAVRALGAVGYKINSITDVTPIPHNGCRPPKKRRV 128
GL+ ++V++KG G GR +A++ + G ++ I DVTPIPHNGCRPPKKRR+
Sbjct 89 GLQRIEVMIKGTGNGRNAAIQVIRKSGLFLSIIRDVTPIPHNGCRPPKKRRL 140
>A0A2R4PAJ5 Small ribosomal subunit protein uS11c [Sciaphila thaidanica]
Length=118
Score = 81.3 bits (199), Expect = 9e-25
Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 3/110 (3%)
Query 19 VAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTPFAAQVAAEVAGKAALDYGL 78
+ HI +S NNTIVT TD G W S GQ + G R++TP+AA +A
Sbjct 12 IIHIQSSLNNTIVTGTDIHGKVFFW--SSGQTY-GLRRTTPYAALIATINVILRIKKKRT 68
Query 79 KNLDVLVKGPGPGRESAVRALGAVGYKINSITDVTPIPHNGCRPPKKRRV 128
K + V+++G G GR+ ++R + G + D T +PHNGCRPPK+RR+
Sbjct 69 KFVKVIIRGIGSGRDISLRTISRSGVPFRFVFDTTFMPHNGCRPPKRRRL 118
>A0A4Y5QLB5 Ribosomal protein S11 [Chlorops oryzae]
Length=103
Score = 78.6 bits (192), Expect = 7e-24
Identities = 43/102 (42%), Positives = 61/102 (60%), Gaps = 0/102 (0%)
Query 21 HIHASFNNTIVTITDRQGNALAWATSGGQGFRGSRKSTPFAAQVAAEVAGKAALDYGLKN 80
+I S NNTI+++TD +G + G +GF+ +RK T AAQ A G A++ G +
Sbjct 2 NIRVSPNNTIISVTDYKGVPRLIRSCGIEGFKNTRKGTNIAAQATAITIGSKAVELGWQT 61
Query 81 LDVLVKGPGPGRESAVRALGAVGYKINSITDVTPIPHNGCRP 122
+ V V+G GPGR SA++ L G KI SITD TP+ + RP
Sbjct 62 IRVKVRGLGPGRMSAIKGLQMSGLKIVSITDNTPVSKHPPRP 103
>Q56J82 S14e ribosomal protein-like protein [Philodina sp. NPS-2005]
Length=151
Score = 79.3 bits (194), Expect = 1e-23
Identities = 48/119 (40%), Positives = 65/119 (55%), Gaps = 9/119 (8%)
Query 18 GVAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSR-KSTPFAAQVAAEVAGKAALDY 76
GVAHI+ASFN+T V +TD G +GG + R +++P+AA +AA+ +
Sbjct 29 GVAHIYASFNDTFVHVTDLSGKETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCRGL 88
Query 77 GLKNLDVLV--------KGPGPGRESAVRALGAVGYKINSITDVTPIPHNGCRPPKKRR 127
G+ L V + K PGPG +SA+RAL G KI I DVTPIP + R RR
Sbjct 89 GITALHVRLRATGGNKTKTPGPGAQSALRALARSGIKIGRIEDVTPIPSDSXRRKGGRR 147
>A0A2R8Y811 Ribosomal protein S14 [Homo sapiens]
Length=150
Score = 79.0 bits (193), Expect = 2e-23
Identities = 47/119 (39%), Positives = 64/119 (54%), Gaps = 9/119 (8%)
Query 18 GVAHIHASFNNTIVTITDRQGNALAWATSGGQGFRGSR-KSTPFAAQVAAEVAGKAALDY 76
GV HI ASFN+T V +TD G +GG + R +S+P+AA +AA+ + +
Sbjct 29 GVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKEL 88
Query 77 GLKNLDVLV--------KGPGPGRESAVRALGAVGYKINSITDVTPIPHNGCRPPKKRR 127
G+ L + + K PGPG +SA+RAL G KI I DVTPIP + R RR
Sbjct 89 GITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRR 147
Lambda K H a alpha
0.320 0.134 0.399 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 145726
Database: 7a14ee550ce5d9c5da1b97cd2e73342d.TrEMBL.fasta
Posted date: Jun 3, 2024 10:38 AM
Number of letters in database: 1,952
Number of sequences in database: 15
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
