ACIAD0040 / SwissProt Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: e05b7be212fe760c72492aef501191ab.SwissProt.fasta
           2 sequences; 513 total letters



Query= ACIAD0040

Length=101
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P32839 Mitochondrial chaperone BCS1 [Saccharomyces cerevisiae (st...  35.0    1e-07
Q8ER59 Large ribosomal subunit protein bL32 [Oceanobacillus iheye...  30.4    1e-06


>P32839 Mitochondrial chaperone BCS1 [Saccharomyces cerevisiae 
(strain ATCC 204508 / S288c)]
Length=456

 Score = 35.0 bits (79),  Expect = 1e-07
 Identities = 30/108 (28%), Positives = 46/108 (43%), Gaps = 14/108 (13%)

Query  4    LATAIILATSGIIATSAMAAPHDNHDRSPQKVVHQDKKQNW------RPGQAVPKQYNSA  57
            L T + +A SGII  S +       D   Q    +DK   W      +  Q V +  +  
Sbjct  61   LGTGLAVARSGIIKASRVLYRQMIVDLEIQS---KDKSYAWFLTWMAKHPQRVSRHLSVR  117

Query  58   RYKVDHRDHKRLHK----PGPGQHWIKANGHYVLI-NDHNHKIIKVIN  100
               + H +     K    PGPG HWI+  G ++LI  + + K+I + N
Sbjct  118  TNYIQHDNGSVSTKFSLVPGPGNHWIRYKGAFILIKRERSAKMIDIAN  165


>Q8ER59 Large ribosomal subunit protein bL32 [Oceanobacillus iheyensis 
(strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 
/ HTE831)]
Length=57

 Score = 30.4 bits (67),  Expect = 1e-06
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 0/25 (0%)

Query  49  AVPKQYNSARYKVDHRDHKRLHKPG  73
           AVPK+  S + K   R HK+LH PG
Sbjct  2   AVPKRRTSKKVKNQRRTHKKLHVPG  26



Lambda      K        H        a         alpha
   0.324    0.135    0.434    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 37051


  Database: e05b7be212fe760c72492aef501191ab.SwissProt.fasta
    Posted date:  May 20, 2024  9:40 PM
  Number of letters in database: 513
  Number of sequences in database:  2



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40