BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: e05b7be212fe760c72492aef501191ab.SwissProt.fasta
2 sequences; 513 total letters
Query= ACIAD0040
Length=101
Score E
Sequences producing significant alignments: (Bits) Value
P32839 Mitochondrial chaperone BCS1 [Saccharomyces cerevisiae (st... 35.0 1e-07
Q8ER59 Large ribosomal subunit protein bL32 [Oceanobacillus iheye... 30.4 1e-06
>P32839 Mitochondrial chaperone BCS1 [Saccharomyces cerevisiae
(strain ATCC 204508 / S288c)]
Length=456
Score = 35.0 bits (79), Expect = 1e-07
Identities = 30/108 (28%), Positives = 46/108 (43%), Gaps = 14/108 (13%)
Query 4 LATAIILATSGIIATSAMAAPHDNHDRSPQKVVHQDKKQNW------RPGQAVPKQYNSA 57
L T + +A SGII S + D Q +DK W + Q V + +
Sbjct 61 LGTGLAVARSGIIKASRVLYRQMIVDLEIQS---KDKSYAWFLTWMAKHPQRVSRHLSVR 117
Query 58 RYKVDHRDHKRLHK----PGPGQHWIKANGHYVLI-NDHNHKIIKVIN 100
+ H + K PGPG HWI+ G ++LI + + K+I + N
Sbjct 118 TNYIQHDNGSVSTKFSLVPGPGNHWIRYKGAFILIKRERSAKMIDIAN 165
>Q8ER59 Large ribosomal subunit protein bL32 [Oceanobacillus iheyensis
(strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954
/ HTE831)]
Length=57
Score = 30.4 bits (67), Expect = 1e-06
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 0/25 (0%)
Query 49 AVPKQYNSARYKVDHRDHKRLHKPG 73
AVPK+ S + K R HK+LH PG
Sbjct 2 AVPKRRTSKKVKNQRRTHKKLHVPG 26
Lambda K H a alpha
0.324 0.135 0.434 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 37051
Database: e05b7be212fe760c72492aef501191ab.SwissProt.fasta
Posted date: May 20, 2024 9:40 PM
Number of letters in database: 513
Number of sequences in database: 2
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40