BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 10675cf436eb8fa14aab214562d1ca6a.SwissProt.fasta
           1 sequences; 353 total letters



Query= ACIAD0061

Length=68
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P54498 Uncharacterized lipoprotein YqgU [Bacillus subtilis (strai...  33.1    1e-07


>P54498 Uncharacterized lipoprotein YqgU [Bacillus subtilis (strain 
168)]
Length=353

 Score = 33.1 bits (74),  Expect = 1e-07
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 8/60 (13%)

Query  8   MLQVFIIICAVITFSVMAADPRHTQQDQAVSAWQKTTQTAKNTSKDQTHLNLTQTNREEG  67
           M  V  I+ AV+ FS+ A +P H QQ QA          AK+  KD   L+  + +  EG
Sbjct  3   MRSVCFILLAVLLFSLSACEPSHQQQKQA--------SAAKDEKKDIIPLSAEKADGAEG  54



Lambda      K        H        a         alpha
   0.326    0.128    0.373    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 17524


  Database: 10675cf436eb8fa14aab214562d1ca6a.SwissProt.fasta
    Posted date:  May 20, 2024  5:48 PM
  Number of letters in database: 353
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40