BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 127e3ba3765d02a52796e0d1a58cf191.SwissProt.fasta
           1 sequences; 504 total letters



Query= ACIAD0110

Length=486
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q48449 Uncharacterized 55.8 kDa protein in cps region [Klebsiella...  419     2e-147


>Q48449 Uncharacterized 55.8 kDa protein in cps region [Klebsiella 
pneumoniae]
Length=504

 Score = 419 bits (1078),  Expect = 2e-147
 Identities = 219/474 (46%), Positives = 281/474 (59%), Gaps = 15/474 (3%)

Query  12   LMGLSAFSFAQGIVLNNENLRTDLNWLNQQGVIQISTSTWPLSGDEIQRALSNAKVQNHT  71
            L  L A ++A G+V+N+ +LR DL WL+ +GVI +S STWPLS +EI RAL  AK    +
Sbjct  41   LSSLGAQAYAAGLVVNDNDLRNDLAWLSDRGVIHLSLSTWPLSQEEISRALKKAKPSYSS  100

Query  72   QQRVIDSVTNALKADQQPVKVGLFAETDQKKLPQAFGDQQKAQYVASLEMNAGGENWDGK  131
            +Q V+  +   L A +   +V  +  TD+   PQ FG  Q A     L  N  GE WD  
Sbjct  101  EQVVLARINQRLSALKADFRVTGYTSTDKPGTPQGFGQTQPADNSLGLAFNNSGEWWDVH  160

Query  132  LRINGEKDQQIDNGHKVNVEGSYLAGKLWNQWFIAGQIPTWWGPGHDGSLIRGDASRPVY  191
            L+ N E  ++I NG + N  G+Y A K WNQW   GQ+P WWGPG++GSLIRGDA RP+ 
Sbjct  161  LQGNVEGGERISNGSRFNANGAYGAVKFWNQWLSFGQVPQWWGPGYEGSLIRGDAMRPMT  220

Query  192  GVTIQRAEQNAFETKWLSWIGPWQYQVFAGQLDDYKAVPDAKLIGMRLTAQPLPYLELGA  251
            G  +QRAEQ A ET WL W+GPWQYQ+ A Q++ Y AVP AK+IG R T  P   LELGA
Sbjct  221  GFLMQRAEQAAPETWWLRWVGPWQYQISASQMNQYTAVPHAKIIGGRFTFTPFQSLELGA  280

Query  252  SRTFQIGGKGQPDSFKAYWNAFIGKDNECNDKGCVNDQNASNQLAGFDGKLNLQPLLNVP  311
            SR  Q GG+G+P SF ++W+ F G DN         D    NQLAGFD K  L+P L  P
Sbjct  281  SRIMQWGGEGRPQSFSSFWDGFTGHDN------TGTDNEPGNQLAGFDFKFKLEPTLGWP  334

Query  312  VSLYGQYVGEDESGFLPSRKLYLAGLDYSSSLKNMPYQLYAEWADTRTNGDVLGYSYNHH  371
            VS YGQ VGEDESG+LPS  ++L G++            Y E  DTRTN     YSY HH
Sbjct  335  VSFYGQMVGEDESGYLPSANMFLGGIEGHHGWGKDAVNWYVEAHDTRTNMSRTNYSYTHH  394

Query  372  QYTDGYYQHGFPLGHAIGGDGQMYSVGGDIRIDVMNRLSGRAMVAKVNQSNLKINQAFPE  431
             Y DGYYQ G+PLG A+GGDGQ+++   ++  +   R S R   AKVN  +  IN+AFP 
Sbjct  395  IYKDGYYQQGYPLGDAMGGDGQLFAGKVELITENNQRWSTRLAYAKVNPKDQSINKAFPH  454

Query  432  KDEIKALDLTWTHYIKPEIPLKINGWI-----SDSDVHGRDTGASIGVEFPLDI  480
             D +K + L W+  +   + L  + W      SDSD    D GAS G+E P  +
Sbjct  455  SDTLKGVQLGWSGDVYQSVRLNTSLWYTNANNSDSD----DVGASAGIEIPFSL  504



Lambda      K        H        a         alpha
   0.318    0.136    0.424    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 212440


  Database: 127e3ba3765d02a52796e0d1a58cf191.SwissProt.fasta
    Posted date:  May 20, 2024  5:20 PM
  Number of letters in database: 504
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40