BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 96dcf95c6054bf68170a17793ad16b80.SwissProt.fasta
23 sequences; 8,335 total letters
Query= ACIAD0116
Length=366
Score E
Sequences producing significant alignments: (Bits) Value
B0VNF6 Alanine racemase [Acinetobacter baumannii (strain SDF)] 574 0.0
B9MAN2 Alanine racemase [Acidovorax ebreus (strain TPSY)] 437 4e-157
A2SLS6 Alanine racemase [Methylibium petroleiphilum (strain ATCC ... 437 4e-157
A1W2F6 Alanine racemase [Acidovorax sp. (strain JS42)] 436 2e-156
A1VIH8 Alanine racemase [Polaromonas naphthalenivorans (strain CJ2)] 431 1e-154
Q221R3 Alanine racemase [Albidiferax ferrireducens (strain ATCC B... 429 8e-154
A9BR02 Alanine racemase [Delftia acidovorans (strain DSM 14801 / ... 428 1e-153
A1TIS2 Alanine racemase [Paracidovorax citrulli (strain AAC00-1)] 426 2e-152
B1Y2H6 Alanine racemase [Leptothrix cholodnii (strain ATCC 51168 ... 425 3e-152
Q12H34 Alanine racemase [Polaromonas sp. (strain JS666 / ATCC BAA... 421 7e-151
O30746 Alanine racemase, catabolic [Klebsiella aerogenes] 350 6e-123
P06191 Alanine racemase, catabolic [Salmonella typhimurium (strai... 341 2e-119
P29012 Alanine racemase, catabolic [Escherichia coli (strain K12)] 339 1e-118
Q9HUN4 Alanine racemase, biosynthetic [Pseudomonas aeruginosa (st... 265 1e-89
Q88CB2 Alanine racemase, catabolic [Pseudomonas putida (strain AT... 253 8e-85
Q9KUY6 Alanine racemase [Vibrio cholerae serotype O1 (strain ATCC... 251 3e-84
B9WZ64 Alanine racemase [Pseudomonas taetrolens] 250 1e-83
P0A6B5 Alanine racemase, biosynthetic [Shigella flexneri] 239 2e-79
P0A6B6 Alanine racemase, biosynthetic [Shigella boydii] 239 2e-79
P0A6B4 Alanine racemase, biosynthetic [Escherichia coli (strain K... 239 2e-79
Q93HP9 Alanine racemase, biosynthetic [Shigella sonnei] 238 3e-79
Q932V0 Alanine racemase, biosynthetic [Shigella dysenteriae] 238 3e-79
P0A1A3 Alanine racemase, biosynthetic [Salmonella typhimurium (st... 237 1e-78
>B0VNF6 Alanine racemase [Acinetobacter baumannii (strain SDF)]
Length=367
Score = 574 bits (1479), Expect = 0.0
Identities = 277/366 (76%), Positives = 317/366 (87%), Gaps = 2/366 (1%)
Query 1 MPRPIQAVIHLEALAHNLKIVRASAPESQVFAVVKANAYGHGIERVYQAFKQADGFALLD 60
MPRPI AVIH +AL +NL +VR + P S+VFAVVKANAYGHGIERVY+AFK ADGFALLD
Sbjct 1 MPRPITAVIHRQALQNNLAVVRKAMPNSKVFAVVKANAYGHGIERVYEAFKAADGFALLD 60
Query 61 IEEAKRLRALGWTGPILLLEGIFSPQDLFDCVQYQLSFTVHHDVQIDWIEGHPEDAQFDI 120
+EEAKR+RALGWTGPILLLEG+FSPQDLFDCVQYQLSFT+H + QI+W+E HP AQFD+
Sbjct 61 LEEAKRIRALGWTGPILLLEGVFSPQDLFDCVQYQLSFTIHSEAQIEWVEQHPYPAQFDV 120
Query 121 FLKMNSGMNRLGFKPVQYRHAWQRLNALSQVRHLTHMMHFSDADGERFGESGITYQHDLF 180
FLKMNSGM+RLGFKP Y AW+RLN L+ V +THMMHFSDADG+RFG+ GI YQ F
Sbjct 121 FLKMNSGMSRLGFKPQHYVQAWERLNNLANVAKITHMMHFSDADGDRFGQQGIDYQITAF 180
Query 181 EDTIRDLPGPKSVSNSAAILRH--PLHSDVVRGGIMLYGSSPDYPTHGLHDWSLKPTMSL 238
E+ ++DLPG +SVSNSAAILR+ L SD VR GIMLYGSSPDYPTH + DW L+PTMSL
Sbjct 181 EEIVKDLPGERSVSNSAAILRYQDQLKSDYVRSGIMLYGSSPDYPTHSIADWGLQPTMSL 240
Query 239 RSEIIAIQMLEPNESVGYGSSFVADQPLRIGIVACGYADGYQRISPTGTPVLVDGIETRT 298
RSEII++Q LEPNESVGYGS+FVA+QP+ IGIVACGYADGYQRISPTGTPVLVD + TRT
Sbjct 241 RSEIISVQHLEPNESVGYGSNFVAEQPMTIGIVACGYADGYQRISPTGTPVLVDSVRTRT 300
Query 299 IGRVSMDMLAVDLSAVPKARIGSEVVLWGYSSTGVILPIDDVAAASGTVGYELMCAVTAR 358
+GRVSMDMLAVDL+ + A++GSEVVLWG SSTGV+LPIDDVA +SGTVGYELMCAVTAR
Sbjct 301 VGRVSMDMLAVDLTGIESAKVGSEVVLWGQSSTGVVLPIDDVAVSSGTVGYELMCAVTAR 360
Query 359 VPFTIQ 364
V F Q
Sbjct 361 VQFINQ 366
>B9MAN2 Alanine racemase [Acidovorax ebreus (strain TPSY)]
Length=365
Score = 437 bits (1124), Expect = 4e-157
Identities = 218/368 (59%), Positives = 268/368 (73%), Gaps = 8/368 (2%)
Query 1 MPRPIQAVIHLEALAHNLKIVRASAPESQVFAVVKANAYGHGIERVYQAFKQADGFALLD 60
MPRPI A IH A+ HNL+ R +AP+++V+AVVKANAYGHGIERV++ + ADGFALLD
Sbjct 1 MPRPILATIHPAAVHHNLERARRAAPDARVWAVVKANAYGHGIERVFEGLRAADGFALLD 60
Query 61 IEEAKRLRALGWTGPILLLEGIFSPQDLFDCVQYQLSFTVHHDVQIDWIEGHPEDAQFDI 120
+ EA+R+RALGW GPILLLEG+F P+DL C + L VH D QIDW+ H +
Sbjct 61 LAEAERVRALGWRGPILLLEGVFEPRDLELCSRLGLWHAVHCDAQIDWLAAHKTQVPHRV 120
Query 121 FLKMNSGMNRLGFKPVQYRHAWQRLNALSQVRHLTHMMHFSDADGERFGESGITYQHDLF 180
FLKMNSGMNRLGF P +YR AW RLNAL QV ++ M HFSDADG R GI +Q F
Sbjct 121 FLKMNSGMNRLGFTPERYRSAWARLNALPQVDEISCMTHFSDADGPR----GIAHQVQAF 176
Query 181 EDTIRDLPGPKSVSNSAAILRH----PLHSDVVRGGIMLYGSSPDYPTHGLHDWSLKPTM 236
+ RDLPG + ++NSAA+LRH + D VR GI+LYGS+PD+P DW L+PTM
Sbjct 177 QTATRDLPGERCIANSAALLRHGGDAQVRLDWVRAGIVLYGSAPDHPERRAADWDLQPTM 236
Query 237 SLRSEIIAIQMLEPNESVGYGSSFVADQPLRIGIVACGYADGYQRISPTGTPVLVDGIET 296
+L S II +Q L+ ++VGYGS F A PL IG+VACGYADGY R TGTPVLV+G+ T
Sbjct 237 TLASRIIGVQQLQAGDTVGYGSRFTAQGPLGIGVVACGYADGYPRHCDTGTPVLVNGVRT 296
Query 297 RTIGRVSMDMLAVDLSAVPKARIGSEVVLWGYSSTGVILPIDDVAAASGTVGYELMCAVT 356
RTIGRVSMDMLAVDL+ VP A +G+EV LWG ++ G +LPID+VA A GT+GYELMCA+
Sbjct 297 RTIGRVSMDMLAVDLTPVPGAGLGAEVTLWGRAANGAVLPIDEVAQAGGTIGYELMCALA 356
Query 357 ARVPFTIQ 364
RVP +Q
Sbjct 357 PRVPVVVQ 364
>A2SLS6 Alanine racemase [Methylibium petroleiphilum (strain ATCC
BAA-1232 / LMG 22953 / PM1)]
Length=367
Score = 437 bits (1124), Expect = 4e-157
Identities = 215/364 (59%), Positives = 273/364 (75%), Gaps = 8/364 (2%)
Query 1 MPRPIQAVIHLEALAHNLKIVRASAPESQVFAVVKANAYGHGIERVYQAFKQADGFALLD 60
MPRPI+A+IH EAL HNL RA+ P+++V+AVVKA+AYGHGI RV++A + ADGFALLD
Sbjct 1 MPRPIEALIHAEALTHNLARARAAVPDARVWAVVKAHAYGHGIARVFEALRAADGFALLD 60
Query 61 IEEAKRLRALGWTGPILLLEGIFSPQDLFDCVQYQLSFTVHHDVQIDWIEGHPEDAQFDI 120
+ EA++LR LGW GPILLLEG+F P+DL C + L TVH + QIDW+ H +
Sbjct 61 LAEAQQLRDLGWRGPILLLEGVFEPRDLELCSRLNLWHTVHCEAQIDWLAMHKTHQPHRV 120
Query 121 FLKMNSGMNRLGFKPVQYRHAWQRLNALSQVRHLTHMMHFSDADGERFGESGITYQHDLF 180
FLKMNSGMNRLGF+P +R AW RL+AL QV ++ M HFSDADG R GI +F
Sbjct 121 FLKMNSGMNRLGFRPAAFRAAWTRLHALPQVDEISLMSHFSDADGGR----GIAAAMQVF 176
Query 181 EDTIRDLPGPKSVSNSAAILRH----PLHSDVVRGGIMLYGSSPDYPTHGLHDWSLKPTM 236
+D RDLPG +S+ NSAA LRH + +D VR GIMLYGS+PD+P+H + W L+PTM
Sbjct 177 DDATRDLPGERSLCNSAATLRHGADAAVRADWVRAGIMLYGSAPDFPSHDIAHWDLQPTM 236
Query 237 SLRSEIIAIQMLEPNESVGYGSSFVADQPLRIGIVACGYADGYQRISPTGTPVLVDGIET 296
+LR+ +I Q L+ ++VGYGS F A+ P+RIG+VACGYADGY R +P+GTPVLVDG+ T
Sbjct 237 TLRARLIGTQDLQAGDTVGYGSRFTAEAPMRIGVVACGYADGYPRHAPSGTPVLVDGVRT 296
Query 297 RTIGRVSMDMLAVDLSAVPKARIGSEVVLWGYSSTGVILPIDDVAAASGTVGYELMCAVT 356
R +GRVSMDM+ VDL +P+A GSEV LWG +S+G +LPID+VA A+GTVGYE MCA+
Sbjct 297 RLVGRVSMDMVTVDLGGLPQAARGSEVTLWGRASSGAVLPIDEVAHAAGTVGYEPMCALA 356
Query 357 ARVP 360
ARVP
Sbjct 357 ARVP 360
>A1W2F6 Alanine racemase [Acidovorax sp. (strain JS42)]
Length=365
Score = 436 bits (1120), Expect = 2e-156
Identities = 218/368 (59%), Positives = 268/368 (73%), Gaps = 8/368 (2%)
Query 1 MPRPIQAVIHLEALAHNLKIVRASAPESQVFAVVKANAYGHGIERVYQAFKQADGFALLD 60
MPRPI A IH A+ HNL+ R +AP+++V+AVVKANAYGHGIERV++ + ADGFALLD
Sbjct 1 MPRPILATIHPAAVHHNLERARRAAPDARVWAVVKANAYGHGIERVFEGLRAADGFALLD 60
Query 61 IEEAKRLRALGWTGPILLLEGIFSPQDLFDCVQYQLSFTVHHDVQIDWIEGHPEDAQFDI 120
+ EA+R+RALGW GPILLLEG+F P+DL C + L VH D QIDW+ H +
Sbjct 61 LAEAERVRALGWRGPILLLEGVFEPRDLELCSRLGLWHAVHCDAQIDWLAAHKTQVPHRV 120
Query 121 FLKMNSGMNRLGFKPVQYRHAWQRLNALSQVRHLTHMMHFSDADGERFGESGITYQHDLF 180
FLKMNSGMNRLGF P +YR AW RLNAL QV ++ M HFSDADG R GI +Q F
Sbjct 121 FLKMNSGMNRLGFTPERYRSAWARLNALPQVDEISCMTHFSDADGPR----GIAHQVQAF 176
Query 181 EDTIRDLPGPKSVSNSAAILRH----PLHSDVVRGGIMLYGSSPDYPTHGLHDWSLKPTM 236
+ +DLPG + ++NSAA+LRH + D VR GI+LYGS+PD+P DW L+PTM
Sbjct 177 QAATQDLPGERCIANSAALLRHGGDAQVRLDWVRAGIVLYGSAPDHPERRAADWDLQPTM 236
Query 237 SLRSEIIAIQMLEPNESVGYGSSFVADQPLRIGIVACGYADGYQRISPTGTPVLVDGIET 296
+L S II +Q L+ ++VGYGS F A PL IGIVACGYADGY R TGTPVLV+G+ T
Sbjct 237 TLASRIIGVQQLQAGDTVGYGSRFTAQGPLGIGIVACGYADGYPRHCDTGTPVLVNGVRT 296
Query 297 RTIGRVSMDMLAVDLSAVPKARIGSEVVLWGYSSTGVILPIDDVAAASGTVGYELMCAVT 356
RTIGRVSMDMLAVDL+ VP A +G+EV LWG ++ G +LPID+VA A GT+GYELMCA+
Sbjct 297 RTIGRVSMDMLAVDLTPVPGAGLGAEVTLWGRAANGAVLPIDEVAQAGGTIGYELMCALA 356
Query 357 ARVPFTIQ 364
RVP +Q
Sbjct 357 PRVPVVVQ 364
>A1VIH8 Alanine racemase [Polaromonas naphthalenivorans (strain
CJ2)]
Length=365
Score = 431 bits (1108), Expect = 1e-154
Identities = 221/368 (60%), Positives = 270/368 (73%), Gaps = 9/368 (2%)
Query 1 MPRPIQAVIHLEALAHNLKIVRASAPESQVFAVVKANAYGHGIERVYQAFKQADGFALLD 60
MPRPI A IHL AL+HNL VR +AP+++V+AVVKANAYGHGIERV+ A + ADGFALLD
Sbjct 1 MPRPILATIHLAALSHNLARVRTAAPDAKVWAVVKANAYGHGIERVFDALRSADGFALLD 60
Query 61 IEEAKRLRALGWTGPILLLEGIFSPQDLFDCVQYQLSFTVHHDVQIDWIEGHPEDAQFDI 120
++EA+RLRAL W GPILLLEG F +DL C + L T+H QID + H +
Sbjct 61 LDEARRLRALDWRGPILLLEGCFEARDLELCSRLGLWHTIHCQEQIDMLAAHKTQLPHRV 120
Query 121 FLKMNSGMNRLGFKPVQYRHAWQRLNALSQVRHLTHMMHFSDADGERFGESGITYQHDLF 180
FLKMN+GMNRLGF P ++R AW RLNAL QV ++ M HF DADG + GIT Q F
Sbjct 121 FLKMNTGMNRLGFTPERFRAAWIRLNALPQVDEISLMQHFPDADGPK----GITAQLQAF 176
Query 181 EDTIRDLPGPKSVSNSAAILRH----PLHSDVVRGGIMLYGSSPDYPTHGLHDWSLKPTM 236
+ DLPG +++SNSAAILRH SD VR GI+LYGS+PD+P H DW L+PTM
Sbjct 177 DAVTHDLPGERTLSNSAAILRHTGALAGRSDWVRPGIVLYGSAPDFPEHSASDWELQPTM 236
Query 237 SLRSEIIAIQMLEPNESVGYGSSFVADQPLRIGIVACGYADGYQRISPTGTPVLVDGIET 296
+L S II +Q L ++VGYGSSFVA+ P+RIG+VACGYADGY R PTGTPVLV+G+ T
Sbjct 237 TLSSRIIGLQTLAAGDTVGYGSSFVAEGPMRIGVVACGYADGYPRHCPTGTPVLVNGVRT 296
Query 297 RTIGRVSMDMLAVDLSAVPKARIGSEVVLWGYSST-GVILPIDDVAAASGTVGYELMCAV 355
R +GRVSMDM+ VDL+ VP+A +GSEV LWG +S G +LPID+VA A+GTVGYELMCAV
Sbjct 297 RMVGRVSMDMITVDLTPVPRAGMGSEVTLWGRASKGGAMLPIDEVARAAGTVGYELMCAV 356
Query 356 TARVPFTI 363
RVP +
Sbjct 357 APRVPVAV 364
>Q221R3 Alanine racemase [Albidiferax ferrireducens (strain ATCC
BAA-621 / DSM 15236 / T118)]
Length=374
Score = 429 bits (1103), Expect = 8e-154
Identities = 220/376 (59%), Positives = 275/376 (73%), Gaps = 17/376 (5%)
Query 1 MPRPIQAVIHLEALAHNLKIVRASAPESQVFAVVKANAYGHGIERVYQAFKQADGFALLD 60
MPRPIQA IH AL HNL R +AP+++V+A+VKANAYGHGIERV++ + ADGFALLD
Sbjct 1 MPRPIQATIHTAALRHNLARARLAAPDAKVWAIVKANAYGHGIERVFEGLRAADGFALLD 60
Query 61 IEEAKRLRALGWTGPILLLEGIFSPQDLFDCVQYQLSFTVHHDVQIDWIEGHPEDAQFDI 120
++EA+R+RALGW GPILLLEG+F +DL C + L TVH D QID + H +
Sbjct 61 LDEAQRVRALGWRGPILLLEGVFELRDLELCSRLDLWHTVHCDEQIDMLASHKTKVAQRV 120
Query 121 FLKMNSGMNRLGFKPVQYRHAWQRLNALSQVRHLTHMMHFSDADGERFGESGITYQHDLF 180
FLKMNSGMNRLGF P +YR AW RLNAL QV ++ + HFSDADG R GIT Q +F
Sbjct 121 FLKMNSGMNRLGFTPQRYRAAWTRLNALPQVDEISLITHFSDADGAR----GITEQMAVF 176
Query 181 EDTIRDLPGPKSVSNSAAILRHP---------LHSDVVRGGIMLYGSSPDYPTHGLHDWS 231
+ RDLPG +++SNSAA L H + SD VR GI +YGS+PD+P H DW
Sbjct 177 AEVTRDLPGERTLSNSAATLLHTPARQPGDGFVASDWVRPGIAIYGSAPDFPQHSATDWG 236
Query 232 LKPTMSLRSEIIAIQMLEPNESVGYGSSFVADQPLRIGIVACGYADGYQRISPTGTPVLV 291
L+P+M+L ++IIA Q ++ SVGYGS+FVAD+P+++G+VACGYADGY R+ PTGTPVLV
Sbjct 237 LQPSMTLTAKIIATQTVDTGASVGYGSTFVADKPIQVGVVACGYADGYPRLCPTGTPVLV 296
Query 292 DGIETRTIGRVSMDMLAVDLSAVPKA----RIGSEVVLWGYSSTGVILPIDDVAAASGTV 347
+GI TRT+GRVSMDMLAVDLSAV A IGSEV LWG ++ G++L ID+VA +GTV
Sbjct 297 NGIRTRTVGRVSMDMLAVDLSAVTAAGGQVGIGSEVTLWGRAANGLVLGIDEVAQPAGTV 356
Query 348 GYELMCAVTARVPFTI 363
GYELMCA+ RVP +
Sbjct 357 GYELMCALAPRVPVLV 372
>A9BR02 Alanine racemase [Delftia acidovorans (strain DSM 14801
/ SPH-1)]
Length=367
Score = 428 bits (1101), Expect = 1e-153
Identities = 219/367 (60%), Positives = 263/367 (72%), Gaps = 5/367 (1%)
Query 1 MPRPIQAVIHLEALAHNLKIVRASAPESQVFAVVKANAYGHGIERVYQAFKQADGFALLD 60
MPRPI A IH AL HNL+ VR + P+++++AVVKANAYGHGIE V++A + ADGFA+LD
Sbjct 1 MPRPILATIHSAALRHNLERVRQAVPDAKLWAVVKANAYGHGIENVFEALRGADGFAMLD 60
Query 61 IEEAKRLRALGWTGPILLLEGIFSPQDLFDCVQYQLSFTVHHDVQIDWIEGHPEDAQFDI 120
+ EA+R+R LGW GPILLLEG+F P+DL C + + VH D QIDW+ H +
Sbjct 61 LAEAERVRQLGWRGPILLLEGVFEPRDLELCSRLSIWHAVHCDAQIDWLAAHKTQNGHRV 120
Query 121 FLKMNSGMNRLGFKPVQYRHAWQRLNALSQVRHLTHMMHFSDADGERFGESGITYQHDLF 180
FLKMNSGMNRLGF P +YR AW RLNAL QV ++ M HFSDAD G+ GI+ Q F
Sbjct 121 FLKMNSGMNRLGFTPERYRAAWARLNALPQVEEISFMTHFSDADAGA-GQPGISAQLQRF 179
Query 181 EDTIRDLPGPKSVSNSAAILRHP----LHSDVVRGGIMLYGSSPDYPTHGLHDWSLKPTM 236
D RDLPG +SV NSAA LR + D VR GI+LYGSSPDYP H W L+PT
Sbjct 180 HDATRDLPGERSVGNSAATLRQGDDALVRCDWVRPGIVLYGSSPDYPQHTAAHWDLQPTQ 239
Query 237 SLRSEIIAIQMLEPNESVGYGSSFVADQPLRIGIVACGYADGYQRISPTGTPVLVDGIET 296
+L S II +Q L +SVGYGS F A+ PLR+G VACGYADGY R TGTPVLV+G+ T
Sbjct 240 TLSSRIIGVQQLTEGQSVGYGSRFTAEGPLRLGTVACGYADGYPRHCGTGTPVLVNGVRT 299
Query 297 RTIGRVSMDMLAVDLSAVPKARIGSEVVLWGYSSTGVILPIDDVAAASGTVGYELMCAVT 356
RT+G VSMDMLAVDL+ VP A +GSEV LWG +S G +LPID+VA A+GT+GYELMCAV
Sbjct 300 RTLGCVSMDMLAVDLTPVPDAGMGSEVTLWGRASNGAVLPIDEVAEAAGTLGYELMCAVA 359
Query 357 ARVPFTI 363
RV TI
Sbjct 360 PRVNKTI 366
>A1TIS2 Alanine racemase [Paracidovorax citrulli (strain AAC00-1)]
Length=369
Score = 426 bits (1094), Expect = 2e-152
Identities = 217/372 (58%), Positives = 266/372 (72%), Gaps = 13/372 (3%)
Query 1 MPRPIQAVIHLEALAHNLKIVRASAPESQVFAVVKANAYGHGIERVYQAFKQADGFALLD 60
MPRPIQA IH AL NL RA+AP+++V+AVVKANAYGHGIER ++ + ADGFALLD
Sbjct 1 MPRPIQATIHTAALQQNLARARAAAPDARVWAVVKANAYGHGIERAFEGLRGADGFALLD 60
Query 61 IEEAKRLRALGWTGPILLLEGIFSPQDLFDCVQYQLSFTVHHDVQIDWIEGHPEDAQFDI 120
+ EA+R+R LGW GPILLLEG+F P+DL C + L VH D QIDW+ H A +
Sbjct 61 LGEAERVRQLGWRGPILLLEGVFEPRDLELCSRLSLWHAVHCDEQIDWLSAHKTHAPHRV 120
Query 121 FLKMNSGMNRLGFKPVQYRHAWQRLNALSQVRHLTHMMHFSDADGERFGESGITYQHDLF 180
FLKMNSGMNRLGF P +YR AW RLNAL QV ++ M HFSDADG R GI +Q D F
Sbjct 121 FLKMNSGMNRLGFPPARYRAAWARLNALPQVDEISFMTHFSDADGPR----GIAHQIDAF 176
Query 181 EDTIRDLPGPKSVSNSAAILRHP-----LHSDVVRGGIMLYGSSPDYPTHGLHDWSLKPT 235
+DLPG ++VSNSAA LRH + D VR GI+LYGS+ D+P H W L PT
Sbjct 177 CTATQDLPGERTVSNSAATLRHAGGDARVRGDWVRAGIVLYGSAADHPEHTAAHWGLAPT 236
Query 236 MSLRSEIIAIQMLEPNESVGYGSSFVADQPLRIGIVACGYADGYQRISPTGTPVLVDGIE 295
M+L + II Q L+ ++VGYGSSF AD+P+ IG+VACGYADGY R +PTGTPVLV+G+
Sbjct 237 MTLSARIIGTQQLQAGDTVGYGSSFTADRPMTIGVVACGYADGYPRHAPTGTPVLVNGVR 296
Query 296 TRTIGRVSMDMLAVDLS----AVPKARIGSEVVLWGYSSTGVILPIDDVAAASGTVGYEL 351
TRT+GRVSMDM+ VDL+ A +A +GSE LWG +S G +L ID+VA A+GTVGYEL
Sbjct 297 TRTVGRVSMDMITVDLTPLHEAGVEAGVGSEATLWGRASCGAVLCIDEVAQAAGTVGYEL 356
Query 352 MCAVTARVPFTI 363
MCA+ RVP +
Sbjct 357 MCALAPRVPVVV 368
>B1Y2H6 Alanine racemase [Leptothrix cholodnii (strain ATCC 51168
/ LMG 8142 / SP-6)]
Length=377
Score = 425 bits (1093), Expect = 3e-152
Identities = 217/372 (58%), Positives = 265/372 (71%), Gaps = 8/372 (2%)
Query 1 MPRPIQAVIHLEALAHNLKIVRASAPESQVFAVVKANAYGHGIERVYQAFKQADGFALLD 60
MPRPI+A+IH +ALAHNL R A +++++AV+KANAYGHGIERV+ A ADG A+LD
Sbjct 1 MPRPIEALIHPDALAHNLLQARRHAGDAKLWAVIKANAYGHGIERVWPALLGADGLAMLD 60
Query 61 IEEAKRLRALGWTGPILLLEGIFSPQDLFDCVQYQLSFTVHHDVQIDWIEGHPEDAQFDI 120
++EA+R+R LGW GP+LLLEG F +DL C + L VHHD QI W+ H +
Sbjct 61 LDEAQRVRNLGWRGPVLLLEGCFEARDLELCSRLNLWHVVHHDDQIGWLAAHKTHQPHRV 120
Query 121 FLKMNSGMNRLGFKPVQYRHAWQRLNALSQVRHLTHMMHFSDADGERFGESGITYQHDLF 180
FLKMNSGMNRLGF P R AW RLNAL QV ++ M HFSDAD R G GI Q F
Sbjct 121 FLKMNSGMNRLGFTPQALRSAWVRLNALPQVDEISLMTHFSDADSPRPGADGIAAQVARF 180
Query 181 EDTIRDLPGPKSVSNSAAILRH----PLHSDVVRGGIMLYGSSPDYPTHGLHDWSLKPTM 236
+ DLPG +S+SNSAAILRH + +D VR GI+ YGSSPD+P H + W+L+P M
Sbjct 181 VEATHDLPGERSLSNSAAILRHCERAEVRADWVRSGILSYGSSPDHPQHDIGHWNLRPAM 240
Query 237 SLRSEIIAIQMLEPNESVGYGSSFVADQPLRIGIVACGYADGYQRISP----TGTPVLVD 292
+LRS +IA Q L+ +SVGYGS FVA QP+RIGIVACGYADGY R +P TPVLVD
Sbjct 241 TLRSRLIATQQLQAGDSVGYGSRFVAQQPMRIGIVACGYADGYPRHAPGDTGNATPVLVD 300
Query 293 GIETRTIGRVSMDMLAVDLSAVPKARIGSEVVLWGYSSTGVILPIDDVAAASGTVGYELM 352
G+ T T+GRVSMDMLAVDLS +P A +GSEV LWG+ G +LPID VA A+GT+GYELM
Sbjct 301 GLRTHTVGRVSMDMLAVDLSELPAAGVGSEVTLWGHGPHGSLLPIDAVAQAAGTIGYELM 360
Query 353 CAVTARVPFTIQ 364
CA+ RVP +Q
Sbjct 361 CALAQRVPTHVQ 372
>Q12H34 Alanine racemase [Polaromonas sp. (strain JS666 / ATCC
BAA-500)]
Length=364
Score = 421 bits (1083), Expect = 7e-151
Identities = 214/364 (59%), Positives = 260/364 (71%), Gaps = 8/364 (2%)
Query 1 MPRPIQAVIHLEALAHNLKIVRASAPESQVFAVVKANAYGHGIERVYQAFKQADGFALLD 60
MPRPI A IH ALAHNL R++AP+++V+AVVKANAYGHGIE V+ + ADGFALLD
Sbjct 1 MPRPILATIHRPALAHNLARARSAAPDARVWAVVKANAYGHGIEHVFDGLRSADGFALLD 60
Query 61 IEEAKRLRALGWTGPILLLEGIFSPQDLFDCVQYQLSFTVHHDVQIDWIEGHPEDAQFDI 120
+ EA+RLRAL W GPILLLEG F +DL C + L +H + QID + H +
Sbjct 61 LAEARRLRALDWRGPILLLEGCFEARDLELCSRLSLWHVIHCNEQIDMLAAHKTQVPHRV 120
Query 121 FLKMNSGMNRLGFKPVQYRHAWQRLNALSQVRHLTHMMHFSDADGERFGESGITYQHDLF 180
FLKMNSGMNRLG +P ++R AW RLNAL QV ++ M HFSDADG + GI Q F
Sbjct 121 FLKMNSGMNRLGLRPERFRAAWTRLNALPQVDEISLMTHFSDADGPK----GIAAQLRAF 176
Query 181 EDTIRDLPGPKSVSNSAAILRH----PLHSDVVRGGIMLYGSSPDYPTHGLHDWSLKPTM 236
+ DLPG +S+SNSA +LRH SD VR GI++YGS+PD+P H DW L+PTM
Sbjct 177 DAVTHDLPGERSLSNSAGVLRHGDELAARSDWVRPGIVVYGSAPDFPEHSAADWGLQPTM 236
Query 237 SLRSEIIAIQMLEPNESVGYGSSFVADQPLRIGIVACGYADGYQRISPTGTPVLVDGIET 296
+L S II +Q L ++VGYGSSF AD PLRIG+VACGYADGY R TGTPVLV+G+ T
Sbjct 237 TLSSRIIGVQELAAGDTVGYGSSFTADGPLRIGVVACGYADGYPRHCSTGTPVLVNGVRT 296
Query 297 RTIGRVSMDMLAVDLSAVPKARIGSEVVLWGYSSTGVILPIDDVAAASGTVGYELMCAVT 356
R +GRVSMDM+ VDL+ VP A +G+EV LWG SS G +LPID+VA +GTVGYELMCAV
Sbjct 297 RMVGRVSMDMITVDLTPVPDAGMGAEVTLWGRSSGGAVLPIDEVAQTAGTVGYELMCAVA 356
Query 357 ARVP 360
RVP
Sbjct 357 PRVP 360
>O30746 Alanine racemase, catabolic [Klebsiella aerogenes]
Length=356
Score = 350 bits (898), Expect = 6e-123
Identities = 192/361 (53%), Positives = 241/361 (67%), Gaps = 10/361 (3%)
Query 1 MPRPIQAVIHLEALAHNLKIVRASAPESQVFAVVKANAYGHGIERVYQAFKQADGFALLD 60
M RP+ A I L AL NL+IVR +AP S+++AV K NAYGHG+ RV+ A ADGFALL+
Sbjct 1 MTRPVVASIDLLALRQNLQIVRRAAPGSRLWAVDKDNAYGHGVARVWSALSAADGFALLN 60
Query 61 IEEAKRLRALGWTGPILLLEGIFSPQDLFDCVQYQLSFTVHHDVQIDWIEGHPEDAQFDI 120
+EEA LR GW GPILLLEG F +L QY+L +VH + QI ++ A DI
Sbjct 61 LEEAILLREQGWKGPILLLEGFFHADELAVLDQYRLPTSVHSNWQIKALQQAKLRAPLDI 120
Query 121 FLKMNSGMNRLGFKPVQYRHAWQRLNALSQVRHLTHMMHFSDADGERFGESGITYQHDLF 180
+LK+NSGMNRLGF P + WQ+L A+S V +T M HF++A+ + GI
Sbjct 121 YLKVNSGMNRLGFMPERVHTVWQQLRAISNVGEMTLMSHFAEAENPQ----GIVEPMRRI 176
Query 181 EDTIRDLPGPKSVSNSAAILRHP-LHSDVVRGGIMLYGSSPDYPTHGLHDWSLKPTMSLR 239
E L P+S++NSAA L HP H D VR GI+LYG+SP + + LKP M+LR
Sbjct 177 EQAAEGLDCPRSLANSAATLWHPEAHFDWVRPGIVLYGASPSGQWQDIANTGLKPVMTLR 236
Query 240 SEIIAIQMLEPNESVGYGSSFVADQPLRIGIVACGYADGYQRISPTGTPVLVDGIETRTI 299
SEII +Q L P E++GYG + Q RIGIVACGYADGY R++P+GTPVLVDG+ T T+
Sbjct 237 SEIIGVQNLRPGEAIGYGGLYRTTQEQRIGIVACGYADGYPRVAPSGTPVLVDGVRTTTV 296
Query 300 GRVSMDMLAVDLSAVPKARIGSEVVLWGYSSTGVILPIDDVAAASGTVGYELMCAVTARV 359
GRVSMDMLAVDL+ P+A IG+ V LWG + IDDVAA+SGTVGYELMCA+ RV
Sbjct 297 GRVSMDMLAVDLTPCPQAGIGAPVELWGKE-----IKIDDVAASSGTVGYELMCALAPRV 351
Query 360 P 360
P
Sbjct 352 P 352
>P06191 Alanine racemase, catabolic [Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720)]
Length=356
Score = 341 bits (874), Expect = 2e-119
Identities = 188/362 (52%), Positives = 237/362 (65%), Gaps = 10/362 (3%)
Query 1 MPRPIQAVIHLEALAHNLKIVRASAPESQVFAVVKANAYGHGIERVYQAFKQADGFALLD 60
M RPIQA + L+ + NL IVR +APE++V++VVKANAYGHGIERV+ A DGFA+L+
Sbjct 1 MTRPIQASLDLQVMKQNLAIVRRAAPEARVWSVVKANAYGHGIERVWSALGATDGFAMLN 60
Query 61 IEEAKRLRALGWTGPILLLEGIFSPQDLFDCVQYQLSFTVHHDVQIDWIEGHPEDAQFDI 120
+EEA LR GW GPIL+LEG F QDL Y+L+ +H + Q+ ++ +A DI
Sbjct 61 LEEAITLRERGWKGPILMLEGFFHAQDLEAYDTYRLTTCIHSNWQLKALQNARLNAPLDI 120
Query 121 FLKMNSGMNRLGFKPVQYRHAWQRLNALSQVRHLTHMMHFSDADGERFGESGITYQHDLF 180
++K+NSGMNRLGF+P + + WQ+L A+ V +T M HF+ AD GI
Sbjct 121 YVKVNSGMNRLGFQPERAQTVWQQLRAMRNVGEMTLMSHFAQAD----HPEGIGEAMRRI 176
Query 181 EDTIRDLPGPKSVSNSAAILRHP-LHSDVVRGGIMLYGSSPDYPTHGLHDWSLKPTMSLR 239
L S+SNSAA L HP H D VR GI+LYG+SP + D LKP M+L
Sbjct 177 ALATEGLQCAYSLSNSAATLWHPQAHYDWVRPGIILYGASPSGQWRDIADTGLKPVMTLS 236
Query 240 SEIIAIQMLEPNESVGYGSSFVADQPLRIGIVACGYADGYQRISPTGTPVLVDGIETRTI 299
SEII +Q L E VGYG + Q RIGIVA GYADGY R +PTGTPVLVDGI TRT+
Sbjct 237 SEIIGVQTLSAGERVGYGGGYSVTQEQRIGIVAAGYADGYPRHAPTGTPVLVDGIRTRTV 296
Query 300 GRVSMDMLAVDLSAVPKARIGSEVVLWGYSSTGVILPIDDVAAASGTVGYELMCAVTARV 359
G VSMDMLAVDL+ P+A IG+ V LWG + +DDVA+A+GT+GYEL+CAV RV
Sbjct 297 GTVSMDMLAVDLTPCPQAGIGTPVELWGKE-----IKVDDVASAAGTLGYELLCAVAPRV 351
Query 360 PF 361
PF
Sbjct 352 PF 353
>P29012 Alanine racemase, catabolic [Escherichia coli (strain
K12)]
Length=356
Score = 339 bits (869), Expect = 1e-118
Identities = 188/361 (52%), Positives = 239/361 (66%), Gaps = 10/361 (3%)
Query 1 MPRPIQAVIHLEALAHNLKIVRASAPESQVFAVVKANAYGHGIERVYQAFKQADGFALLD 60
M RPIQA + L+AL NL IVR +A ++V++VVKANAYGHGIER++ A DGFALL+
Sbjct 1 MTRPIQASLDLQALKQNLSIVRQAATHARVWSVVKANAYGHGIERIWSAIGATDGFALLN 60
Query 61 IEEAKRLRALGWTGPILLLEGIFSPQDLFDCVQYQLSFTVHHDVQIDWIEGHPEDAQFDI 120
+EEA LR GW GPIL+LEG F QDL Q++L+ VH + Q+ ++ A DI
Sbjct 61 LEEAITLRERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLDI 120
Query 121 FLKMNSGMNRLGFKPVQYRHAWQRLNALSQVRHLTHMMHFSDADGERFGESGITYQHDLF 180
+LK+NSGMNRLGF+P + WQ+L A++ V +T M HF++A+ GI+
Sbjct 121 YLKVNSGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAE----HPDGISGAMARI 176
Query 181 EDTIRDLPGPKSVSNSAAILRHP-LHSDVVRGGIMLYGSSPDYPTHGLHDWSLKPTMSLR 239
E L +S+SNSAA L HP H D VR GI+LYG+SP + + L+P M+L
Sbjct 177 EQAAEGLECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLS 236
Query 240 SEIIAIQMLEPNESVGYGSSFVADQPLRIGIVACGYADGYQRISPTGTPVLVDGIETRTI 299
SEII +Q L+ E VGYG + A RIGIVA GYADGY R +PTGTPVLVDG+ T T+
Sbjct 237 SEIIGVQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHAPTGTPVLVDGVRTMTV 296
Query 300 GRVSMDMLAVDLSAVPKARIGSEVVLWGYSSTGVILPIDDVAAASGTVGYELMCAVTARV 359
G VSMDMLAVDL+ P+A IG+ V LWG + IDDVAAA+GTVGYELMCA+ RV
Sbjct 297 GTVSMDMLAVDLTPCPQAGIGTPVELWGKE-----IKIDDVAAAAGTVGYELMCALALRV 351
Query 360 P 360
P
Sbjct 352 P 352
>Q9HUN4 Alanine racemase, biosynthetic [Pseudomonas aeruginosa
(strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG
12228 / 1C / PRS 101 / PAO1)]
Length=358
Score = 265 bits (678), Expect = 1e-89
Identities = 163/367 (44%), Positives = 216/367 (59%), Gaps = 24/367 (7%)
Query 3 RPIQAVIHLEALAHNLKIVRASAPESQVFAVVKANAYGHGIERVYQAFKQ-ADGFALLDI 61
RP+ A + L A+ HN + + AP+ Q FAVVKANAYGHG V A ADGFA+ +
Sbjct 2 RPLVATVDLSAIRHNYALAKRCAPQRQAFAVVKANAYGHGAREVVTALHDDADGFAVACL 61
Query 62 EEAKRLRALGWTGPILLLEGIFSPQDLFDCVQYQLSFTVHHDVQIDWIEGHPEDAQFDIF 121
EEA +RAL + ILLLEG F + Q +L + Q + D +++
Sbjct 62 EEAAEVRALHASARILLLEGCFEASEYALAGQLRLDLVIQGAEQGEAFLAAGLDIPLNVW 121
Query 122 LKMNSGMNRLGFKPVQYRHAWQRLNALSQVRHLTHMMHFSDADGERFGESGITYQHDLFE 181
LK++SGM+RLGF P R RL + VR L + HF+ AD ER H L E
Sbjct 122 LKLDSGMHRLGFDPAALRAWHARLRSHPGVRELNLISHFACAD-ER--------NHPLTE 172
Query 182 DTIRDLPG-------PKSVSNSAAILRHPL-HSDVVRGGIMLYGSSPDYPTHGLHDWSLK 233
+ G +S++NSAA+L P H D +R GIMLYGS+P + LK
Sbjct 173 QQLESFLGLLDLDFDQRSLANSAAVLTIPAAHMDWLRPGIMLYGSTP-LADLSAAELGLK 231
Query 234 PTMSLRSEIIAIQMLEPNESVGYGSSFVADQPLRIGIVACGYADGYQRISPTGTPVLVDG 293
P MSL +++I+++ + ESVGYG++++A++P RIG V+CGYADGY R +P GTPVLV G
Sbjct 232 PAMSLGAQLISLREVAVGESVGYGATWIAERPARIGTVSCGYADGYPRTAPAGTPVLVGG 291
Query 294 IETRTIGRVSMDMLAVDLSAVPKARIGSEVVLWGYSSTGVILPIDDVAAASGTVGYELMC 353
GRVSMDMLAVDLS +P+AR+G V LWG L +D+VA A GT+GYEL+
Sbjct 292 RRAILAGRVSMDMLAVDLSDLPEARVGDPVELWGAG-----LSVDEVARACGTLGYELLS 346
Query 354 AVTARVP 360
VTARVP
Sbjct 347 KVTARVP 353
>Q88CB2 Alanine racemase, catabolic [Pseudomonas putida (strain
ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)]
Length=357
Score = 253 bits (645), Expect = 8e-85
Identities = 152/360 (42%), Positives = 216/360 (60%), Gaps = 12/360 (3%)
Query 3 RPIQAVIHLEALAHNLKIVRASAPESQVFAVVKANAYGHGIERVYQAFK-QADGFALLDI 61
RP +A+I L+AL HN ++ R ++ AV+KA+AYGHG R A + +ADGFA+ I
Sbjct 2 RPARALIDLQALRHNYRLAR-ELTGAKALAVIKADAYGHGAVRCALALEAEADGFAVACI 60
Query 62 EEAKRLRALGWTGPILLLEGIFSPQDLFDCVQYQLSFTVHHDVQIDWIEGHPEDAQFDIF 121
EEA LRA G P+LLLEG F +L ++ L VH Q++ IE P +++
Sbjct 61 EEALELRAAGIKAPVLLLEGFFEASELALIAEHDLWCVVHSLWQLEAIEKTPLHKPLNVW 120
Query 122 LKMNSGMNRLGFKPVQYRHAWQRLNALSQVRHLTHMMHFSDADGERFGESGITYQHDLFE 181
LK++SGM+R+G P Y A+QRL A +V + M HF+ AD + Q +FE
Sbjct 121 LKLDSGMHRVGLHPKDYHDAYQRLLASGKVSRIVLMTHFARAD--ELDADATSQQIAVFE 178
Query 182 DTIRDLPGPKSVSNSAAILRHP-LHSDVVRGGIMLYGSSPDYPTHGLHDWSLKPTMSLRS 240
+ L S+ NS +L P SD VR G+MLYG++P + L+P M+L+S
Sbjct 179 AARQGLAAECSLRNSPGVLGWPQAPSDWVRPGLMLYGATP-FEVAQAEAARLQPVMTLQS 237
Query 241 EIIAIQMLEPNESVGYGSSFVADQPLRIGIVACGYADGYQRISPTGTPVLVDGIETRTIG 300
+I+++ L E VGYG+ FV+ +P R+G+VA GYADGY R +P GTPVLV G T+ IG
Sbjct 238 RVISVRELPAGEPVGYGAKFVSPRPTRVGVVAMGYADGYPRQAPNGTPVLVAGKRTQLIG 297
Query 301 RVSMDMLAVDLSAVPKARIGSEVVLWGYSSTGVILPIDDVAAASGTVGYELMCAVTARVP 360
RVSMDML++DL+ VP+A +GS V WG + +VAA +GT+ Y++ C + RVP
Sbjct 298 RVSMDMLSIDLTDVPQATVGSPVEFWGKQ-----VLASEVAAHAGTIPYQIFCNL-KRVP 351
>Q9KUY6 Alanine racemase [Vibrio cholerae serotype O1 (strain
ATCC 39315 / El Tor Inaba N16961)]
Length=361
Score = 251 bits (642), Expect = 3e-84
Identities = 148/355 (42%), Positives = 212/355 (60%), Gaps = 10/355 (3%)
Query 7 AVIHLEALAHNLKIVRASAPESQVFAVVKANAYGHGIERVYQAFKQADGFALLDIEEAKR 66
A I+LEAL HNL+ V+ APES++ AVVKAN YGHG+ + + AD F + IEEA +
Sbjct 6 AYINLEALQHNLQRVKQQAPESKIMAVVKANGYGHGLRHIARHALGADAFGVARIEEALQ 65
Query 67 LRALGWTGPILLLEGIFSPQDLFDCVQYQLSFTVHHDVQIDWIEGHPEDAQFDIFLKMNS 126
LRA G PILLLEG +SP DL V + VH + Q+ +E + ++LK++S
Sbjct 66 LRASGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLQALEQAQLETPVMVWLKVDS 125
Query 127 GMNRLGFKPVQYRHAWQRLNALSQV-RHLTHMMHFSDADGERFGESGITYQHDLFEDTIR 185
GM+RLG +P QY+ RL+ V + L +M HF AD +S Q +LF +
Sbjct 126 GMHRLGVRPEQYQDFVARLHQCENVAKPLRYMSHFGCAD--ELDKSTTVEQTELFLSLTQ 183
Query 186 DLPGPKSVSNSAAILRHPLHS-DVVRGGIMLYGSSPDYPTHGLHDWSLKPTMSLRSEIIA 244
G +S++ SA +L P + VR GI++YG SP + +P M+L+S +IA
Sbjct 184 GCQGERSLAASAGLLAWPQSQLEWVRPGIIMYGVSP-FVEKSAVQLGYQPVMTLKSHLIA 242
Query 245 IQMLEPNESVGYGSSFVADQPLRIGIVACGYADGYQRISPTGTPVLVDGIETRTIGRVSM 304
++ ++ ESVGYG ++ + + +IG++A GY DGY R +P GTPV+V+G GRVSM
Sbjct 243 VREVKAGESVGYGGTWTSQRDTKIGVIAIGYGDGYPRTAPNGTPVVVNGRRVPIAGRVSM 302
Query 305 DMLAVDLSAVPKARIGSEVVLWGYSSTGVILPIDDVAAASGTVGYELMCAVTARV 359
DML VDL R+G E +LWG LP+++VAA GT+GYEL+ +T+RV
Sbjct 303 DMLTVDLGPDACDRVGDEAMLWGNE-----LPVEEVAAHIGTIGYELVTKLTSRV 352
>B9WZ64 Alanine racemase [Pseudomonas taetrolens]
Length=357
Score = 250 bits (638), Expect = 1e-83
Identities = 152/360 (42%), Positives = 214/360 (59%), Gaps = 12/360 (3%)
Query 3 RPIQAVIHLEALAHNLKIVRASAPESQVFAVVKANAYGHGIERVYQAFK-QADGFALLDI 61
RP +A+I L+AL HN ++ R ++ AV+KA+AYGHG R A + +ADGFA+ I
Sbjct 2 RPARALIDLQALRHNYRLAR-ELTGAKALAVIKADAYGHGAVRCALALEAEADGFAVACI 60
Query 62 EEAKRLRALGWTGPILLLEGIFSPQDLFDCVQYQLSFTVHHDVQIDWIEGHPEDAQFDIF 121
EEA LRA G P+LLLEG F +L ++ L VH Q++ IE ++
Sbjct 61 EEALELRAAGIKAPVLLLEGFFEASELALIAEHDLWCVVHSLWQLEAIERTQLHKPLTVW 120
Query 122 LKMNSGMNRLGFKPVQYRHAWQRLNALSQVRHLTHMMHFSDADGERFGESGITYQHDLFE 181
LK++SGM+R+G P Y A+QRL A +V + M HF+ AD Q +FE
Sbjct 121 LKLDSGMHRVGLHPKDYHEAYQRLLASGKVARIVLMSHFARAD--ELDADATAQQIAVFE 178
Query 182 DTIRDLPGPKSVSNSAAILRHP-LHSDVVRGGIMLYGSSPDYPTHGLHDWSLKPTMSLRS 240
+ L S+ NS +L P SD VR G+MLYG++P + L+P M+L+S
Sbjct 179 AARQGLAAECSLRNSPGVLGWPQAPSDWVRPGLMLYGATP-FEVAQAEAERLQPVMTLQS 237
Query 241 EIIAIQMLEPNESVGYGSSFVADQPLRIGIVACGYADGYQRISPTGTPVLVDGIETRTIG 300
+I+++ L E VGYG+ FV+ +P R+G+VA GYADGY R +P GTPVLV G T+ IG
Sbjct 238 RVISVRELPAGEPVGYGAKFVSPRPTRVGVVAMGYADGYPRQAPNGTPVLVAGKRTQLIG 297
Query 301 RVSMDMLAVDLSAVPKARIGSEVVLWGYSSTGVILPIDDVAAASGTVGYELMCAVTARVP 360
RVSMDML++DL+ VP+A +GS V LWG + +VAA +GT+ Y++ C + RVP
Sbjct 298 RVSMDMLSIDLTDVPEATVGSPVELWGKH-----VLASEVAAHAGTIPYQIFCNL-KRVP 351
>P0A6B5 Alanine racemase, biosynthetic [Shigella flexneri]
Length=359
Score = 239 bits (610), Expect = 2e-79
Identities = 141/354 (40%), Positives = 205/354 (58%), Gaps = 9/354 (3%)
Query 8 VIHLEALAHNLKIVRASAPESQVFAVVKANAYGHGIERVYQAFKQADGFALLDIEEAKRL 67
VI+ AL HNL+ +R AP S++ AVVKANAYGHG+ + AD F + +EEA RL
Sbjct 7 VINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPDADAFGVARLEEALRL 66
Query 68 RALGWTGPILLLEGIFSPQDLFDCVQYQLSFTVHHDVQIDWIEGHPEDAQFDIFLKMNSG 127
RA G T P+LLLEG F +DL VH++ Q+ +E D +++K+++G
Sbjct 67 RAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWMKLDTG 126
Query 128 MNRLGFKPVQYRHAWQRLNALSQVRHLTHMM-HFSDADGERFGESGITYQHDLFEDTIRD 186
M+RLG +P Q + RL VR +++ HF+ AD + G + Q +F
Sbjct 127 MHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGAT--EKQLAIFNTFCEG 184
Query 187 LPGPKSVSNSAAILRHP-LHSDVVRGGIMLYGSSPDYPTHGLHDWSLKPTMSLRSEIIAI 245
PG +S++ S IL P H D VR GI+LYG SP D+ +P MSL S +IA+
Sbjct 185 KPGQRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSSLIAV 244
Query 246 QMLEPNESVGYGSSFVADQPLRIGIVACGYADGYQRISPTGTPVLVDGIETRTIGRVSMD 305
+ + E VGYG ++V+++ R+G+VA GY DGY R +P+GTPVLV+G E +GRV+MD
Sbjct 245 REHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPIVGRVAMD 304
Query 306 MLAVDLSAVPKARIGSEVVLWGYSSTGVILPIDDVAAASGTVGYELMCAVTARV 359
M+ VDL + + G V+LWG LP++ +A + YEL+ +T+RV
Sbjct 305 MICVDLGPQAQDKAGDPVILWGEG-----LPVERIAEMTKVSAYELITRLTSRV 353
>P0A6B6 Alanine racemase, biosynthetic [Shigella boydii]
Length=359
Score = 239 bits (610), Expect = 2e-79
Identities = 141/354 (40%), Positives = 205/354 (58%), Gaps = 9/354 (3%)
Query 8 VIHLEALAHNLKIVRASAPESQVFAVVKANAYGHGIERVYQAFKQADGFALLDIEEAKRL 67
VI+ AL HNL+ +R AP S++ AVVKANAYGHG+ + AD F + +EEA RL
Sbjct 7 VINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPDADAFGVARLEEALRL 66
Query 68 RALGWTGPILLLEGIFSPQDLFDCVQYQLSFTVHHDVQIDWIEGHPEDAQFDIFLKMNSG 127
RA G T P+LLLEG F +DL VH++ Q+ +E D +++K+++G
Sbjct 67 RAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWMKLDTG 126
Query 128 MNRLGFKPVQYRHAWQRLNALSQVRHLTHMM-HFSDADGERFGESGITYQHDLFEDTIRD 186
M+RLG +P Q + RL VR +++ HF+ AD + G + Q +F
Sbjct 127 MHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGAT--EKQLAIFNTFCEG 184
Query 187 LPGPKSVSNSAAILRHP-LHSDVVRGGIMLYGSSPDYPTHGLHDWSLKPTMSLRSEIIAI 245
PG +S++ S IL P H D VR GI+LYG SP D+ +P MSL S +IA+
Sbjct 185 KPGQRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSSLIAV 244
Query 246 QMLEPNESVGYGSSFVADQPLRIGIVACGYADGYQRISPTGTPVLVDGIETRTIGRVSMD 305
+ + E VGYG ++V+++ R+G+VA GY DGY R +P+GTPVLV+G E +GRV+MD
Sbjct 245 REHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPIVGRVAMD 304
Query 306 MLAVDLSAVPKARIGSEVVLWGYSSTGVILPIDDVAAASGTVGYELMCAVTARV 359
M+ VDL + + G V+LWG LP++ +A + YEL+ +T+RV
Sbjct 305 MICVDLGPQAQDKAGDPVILWGEG-----LPVERIAEMTKVSAYELITRLTSRV 353
>P0A6B4 Alanine racemase, biosynthetic [Escherichia coli (strain
K12)]
Length=359
Score = 239 bits (610), Expect = 2e-79
Identities = 141/354 (40%), Positives = 205/354 (58%), Gaps = 9/354 (3%)
Query 8 VIHLEALAHNLKIVRASAPESQVFAVVKANAYGHGIERVYQAFKQADGFALLDIEEAKRL 67
VI+ AL HNL+ +R AP S++ AVVKANAYGHG+ + AD F + +EEA RL
Sbjct 7 VINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPDADAFGVARLEEALRL 66
Query 68 RALGWTGPILLLEGIFSPQDLFDCVQYQLSFTVHHDVQIDWIEGHPEDAQFDIFLKMNSG 127
RA G T P+LLLEG F +DL VH++ Q+ +E D +++K+++G
Sbjct 67 RAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWMKLDTG 126
Query 128 MNRLGFKPVQYRHAWQRLNALSQVRHLTHMM-HFSDADGERFGESGITYQHDLFEDTIRD 186
M+RLG +P Q + RL VR +++ HF+ AD + G + Q +F
Sbjct 127 MHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGAT--EKQLAIFNTFCEG 184
Query 187 LPGPKSVSNSAAILRHP-LHSDVVRGGIMLYGSSPDYPTHGLHDWSLKPTMSLRSEIIAI 245
PG +S++ S IL P H D VR GI+LYG SP D+ +P MSL S +IA+
Sbjct 185 KPGQRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSSLIAV 244
Query 246 QMLEPNESVGYGSSFVADQPLRIGIVACGYADGYQRISPTGTPVLVDGIETRTIGRVSMD 305
+ + E VGYG ++V+++ R+G+VA GY DGY R +P+GTPVLV+G E +GRV+MD
Sbjct 245 REHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPIVGRVAMD 304
Query 306 MLAVDLSAVPKARIGSEVVLWGYSSTGVILPIDDVAAASGTVGYELMCAVTARV 359
M+ VDL + + G V+LWG LP++ +A + YEL+ +T+RV
Sbjct 305 MICVDLGPQAQDKAGDPVILWGEG-----LPVERIAEMTKVSAYELITRLTSRV 353
>Q93HP9 Alanine racemase, biosynthetic [Shigella sonnei]
Length=359
Score = 238 bits (608), Expect = 3e-79
Identities = 141/354 (40%), Positives = 205/354 (58%), Gaps = 9/354 (3%)
Query 8 VIHLEALAHNLKIVRASAPESQVFAVVKANAYGHGIERVYQAFKQADGFALLDIEEAKRL 67
VI+ AL HNL+ +R AP S++ AVVKANAYGHG+ + AD F + +EEA RL
Sbjct 7 VINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPDADAFGVARLEEALRL 66
Query 68 RALGWTGPILLLEGIFSPQDLFDCVQYQLSFTVHHDVQIDWIEGHPEDAQFDIFLKMNSG 127
RA G T P+LLLEG F +DL VH++ Q+ +E D +++K+++G
Sbjct 67 RAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWMKLDTG 126
Query 128 MNRLGFKPVQYRHAWQRLNALSQVRHLTHMM-HFSDADGERFGESGITYQHDLFEDTIRD 186
M+RLG +P Q + RL VR +++ HF+ AD + G + Q +F
Sbjct 127 MHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGAT--EKQLAIFNTFCEG 184
Query 187 LPGPKSVSNSAAILRHP-LHSDVVRGGIMLYGSSPDYPTHGLHDWSLKPTMSLRSEIIAI 245
PG +S++ S IL P H D VR GI+LYG SP D+ +P MSL S +IA+
Sbjct 185 KPGQRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSIGADFGCQPVMSLTSSLIAV 244
Query 246 QMLEPNESVGYGSSFVADQPLRIGIVACGYADGYQRISPTGTPVLVDGIETRTIGRVSMD 305
+ + E VGYG ++V+++ R+G+VA GY DGY R +P+GTPVLV+G E +GRV+MD
Sbjct 245 REHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPIVGRVAMD 304
Query 306 MLAVDLSAVPKARIGSEVVLWGYSSTGVILPIDDVAAASGTVGYELMCAVTARV 359
M+ VDL + + G V+LWG LP++ +A + YEL+ +T+RV
Sbjct 305 MICVDLGPQAQDKAGDPVILWGEG-----LPVERIAEMTKVSAYELITRLTSRV 353
>Q932V0 Alanine racemase, biosynthetic [Shigella dysenteriae]
Length=359
Score = 238 bits (608), Expect = 3e-79
Identities = 141/354 (40%), Positives = 205/354 (58%), Gaps = 9/354 (3%)
Query 8 VIHLEALAHNLKIVRASAPESQVFAVVKANAYGHGIERVYQAFKQADGFALLDIEEAKRL 67
VI+ AL HNL+ +R AP S++ AVVKANAYGHG+ + AD F + +EEA RL
Sbjct 7 VINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPDADAFGVARLEEALRL 66
Query 68 RALGWTGPILLLEGIFSPQDLFDCVQYQLSFTVHHDVQIDWIEGHPEDAQFDIFLKMNSG 127
RA G T P+LLLEG F +DL VH++ Q+ +E D +++K+++G
Sbjct 67 RAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWMKLDTG 126
Query 128 MNRLGFKPVQYRHAWQRLNALSQVRHLTHMM-HFSDADGERFGESGITYQHDLFEDTIRD 186
M+RLG +P Q + RL VR +++ HF+ AD + G + Q +F
Sbjct 127 MHRLGVRPEQAGAFYHRLTQCKNVRQPVNIVSHFARADEPKCGAT--EKQLAIFNTFCEG 184
Query 187 LPGPKSVSNSAAILRHP-LHSDVVRGGIMLYGSSPDYPTHGLHDWSLKPTMSLRSEIIAI 245
PG +S++ S IL P H D VR GI+LYG SP D+ +P MSL S +IA+
Sbjct 185 KPGQRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSSLIAV 244
Query 246 QMLEPNESVGYGSSFVADQPLRIGIVACGYADGYQRISPTGTPVLVDGIETRTIGRVSMD 305
+ + E VGYG ++V+++ R+G+VA GY DGY R +P+GTPVLV+G E +GRV+MD
Sbjct 245 REHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPIVGRVAMD 304
Query 306 MLAVDLSAVPKARIGSEVVLWGYSSTGVILPIDDVAAASGTVGYELMCAVTARV 359
M+ VDL + + G V+LWG LP++ +A + YEL+ +T+RV
Sbjct 305 MICVDLGPQAQDKAGDPVILWGEG-----LPVERIAEMTKVSAYELITRLTSRV 353
>P0A1A3 Alanine racemase, biosynthetic [Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720)]
Length=359
Score = 237 bits (604), Expect = 1e-78
Identities = 143/354 (40%), Positives = 204/354 (58%), Gaps = 9/354 (3%)
Query 8 VIHLEALAHNLKIVRASAPESQVFAVVKANAYGHGIERVYQAFKQADGFALLDIEEAKRL 67
VI+ AL HNL+ +R AP S++ AVVKANAYGHG+ + AD F + +EEA RL
Sbjct 7 VINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLETARTLPDADAFGVARLEEALRL 66
Query 68 RALGWTGPILLLEGIFSPQDLFDCVQYQLSFTVHHDVQIDWIEGHPEDAQFDIFLKMNSG 127
RA G T PILLLEG F DL L VH+ Q+ +E +++K+++G
Sbjct 67 RAGGITQPILLLEGFFDAADLPTISAQCLHTAVHNQEQLAALEAVELAEPVTVWMKLDTG 126
Query 128 MNRLGFKPVQYRHAWQRLNALSQVRHLTHMM-HFSDADGERFGESGITYQHDLFEDTIRD 186
M+RLG +P + +QRL VR +++ HF+ AD G + +Q D+F +
Sbjct 127 MHRLGVRPEEAEAFYQRLTHCKNVRQPVNIVSHFARADEPECGAT--EHQLDIFNAFCQG 184
Query 187 LPGPKSVSNSAAILRHP-LHSDVVRGGIMLYGSSPDYPTHGLHDWSLKPTMSLRSEIIAI 245
PG +S++ S IL P H D R GI+LYG SP D+ +P MSL S +IA+
Sbjct 185 KPGQRSIAASGGILLWPQSHFDWARPGIILYGVSPLEHKPWGPDFGFQPVMSLTSSLIAV 244
Query 246 QMLEPNESVGYGSSFVADQPLRIGIVACGYADGYQRISPTGTPVLVDGIETRTIGRVSMD 305
+ + E VGYG ++V+++ R+G+VA GY DGY R +P+GTPVLV+G E +GRV+MD
Sbjct 245 RDHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPIVGRVAMD 304
Query 306 MLAVDLSAVPKARIGSEVVLWGYSSTGVILPIDDVAAASGTVGYELMCAVTARV 359
M+ VDL + G VVLWG LP++ +A + YEL+ +T+RV
Sbjct 305 MICVDLGPNAQDNAGDPVVLWGEG-----LPVERIAEMTKVSAYELITRLTSRV 353
Lambda K H a alpha
0.323 0.139 0.422 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 2256030
Database: 96dcf95c6054bf68170a17793ad16b80.SwissProt.fasta
Posted date: May 20, 2024 10:29 PM
Number of letters in database: 8,335
Number of sequences in database: 23
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
