BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 1556e493c75776a286999d1c2f7cb549.SwissProt.fasta
1 sequences; 464 total letters
Query= ACIAD0158
Length=133
Score E
Sequences producing significant alignments: (Bits) Value
Q0WP36 Molybdate transporter 2 [Arabidopsis thaliana] 34.3 5e-07
>Q0WP36 Molybdate transporter 2 [Arabidopsis thaliana]
Length=464
Score = 34.3 bits (77), Expect = 5e-07
Identities = 16/46 (35%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query 89 WIERRVTFKHPLSAELQEKVLNVCSKTPV--TKTLLRSVEIKTTIV 132
W+ RR+ K+PLS+EL V ++ + P+ T TL+ ++++ TT++
Sbjct 18 WLRRRLRLKNPLSSELSGAVGDLGTFIPIVLTLTLVSNLDLSTTLI 63
Lambda K H a alpha
0.323 0.135 0.411 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 48510
Database: 1556e493c75776a286999d1c2f7cb549.SwissProt.fasta
Posted date: May 9, 2024 11:00 PM
Number of letters in database: 464
Number of sequences in database: 1
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40