Comparative Genomics

ACIAD0188 / SwissProt Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 18992cae4ec6b79fc05825c45711f5cd.SwissProt.fasta
           24 sequences; 3,305 total letters



Query= ACIAD0188

Length=140
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q6FFJ9 ATP synthase epsilon chain [Acinetobacter baylyi (strain A...  264     3e-96
B0VBP2 ATP synthase epsilon chain [Acinetobacter baumannii (strai...  249     1e-90
A3M145 ATP synthase epsilon chain [Acinetobacter baumannii (strai...  249     1e-90
B2I103 ATP synthase epsilon chain [Acinetobacter baumannii (strai...  249     1e-90
B7I1W5 ATP synthase epsilon chain [Acinetobacter baumannii (strai...  249     1e-90
B7H293 ATP synthase epsilon chain [Acinetobacter baumannii (strai...  249     1e-90
B0VNK5 ATP synthase epsilon chain [Acinetobacter baumannii (strai...  245     8e-89
Q4FQ38 ATP synthase epsilon chain [Psychrobacter arcticus (strain...  185     5e-65
Q1Q8A0 ATP synthase epsilon chain [Psychrobacter cryohalolentis (...  183     2e-64
A5WBW2 ATP synthase epsilon chain [Psychrobacter sp. (strain PRwf...  181     1e-63
A6W3S7 ATP synthase epsilon chain [Marinomonas sp. (strain MWYL1)]    155     2e-53
B3PIS6 ATP synthase epsilon chain [Cellvibrio japonicus (strain U...  152     4e-52
A1U7H3 ATP synthase epsilon chain [Marinobacter nauticus (strain ...  150     2e-51
Q1QSD1 ATP synthase epsilon chain [Chromohalobacter salexigens (s...  150     4e-51
P0A6E6 ATP synthase epsilon chain [Escherichia coli (strain K12)]     128     1e-42
P12988 ATP synthase epsilon chain [Vibrio alginolyticus]              126     9e-42
P41171 ATP synthase epsilon chain [Acidithiobacillus ferridurans]     114     4e-37
O51871 ATP synthase epsilon chain [Buchnera aphidicola subsp. Sch...  105     1e-33
P12699 ATP synthase epsilon chain [Priestia megaterium (strain AT...  88.2    7e-27
O05434 ATP synthase epsilon chain [Moorella thermoacetica (strain...  85.9    5e-26
P37812 ATP synthase epsilon chain [Bacillus subtilis (strain 168)]    83.6    4e-25
P07678 ATP synthase epsilon chain [Bacillus sp. (strain PS3)]         80.1    9e-24
P22480 ATP synthase epsilon chain [Alkalihalophilus pseudofirmus ...  78.6    4e-23
Q9S5B5 ATP synthase epsilon chain [Desulfovibrio vulgaris (strain...  75.9    4e-22


>Q6FFJ9 ATP synthase epsilon chain [Acinetobacter baylyi (strain 
ATCC 33305 / BD413 / ADP1)]
Length=139

 Score = 264 bits (674),  Expect = 3e-96
 Identities = 139/139 (100%), Positives = 139/139 (100%), Gaps = 0/139 (0%)

Query  1    MATMQCDVVSVKESIYSGQVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEE  60
            MATMQCDVVSVKESIYSGQVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEE
Sbjct  1    MATMQCDVVSVKESIYSGQVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEE  60

Query  61   IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALAS  120
            IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALAS
Sbjct  61   IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALAS  120

Query  121  LSEISGQLETIRKIKNRAL  139
            LSEISGQLETIRKIKNRAL
Sbjct  121  LSEISGQLETIRKIKNRAL  139


>B0VBP2 ATP synthase epsilon chain [Acinetobacter baumannii (strain 
AYE)]
Length=139

 Score = 249 bits (637),  Expect = 1e-90
 Identities = 131/138 (95%), Positives = 134/138 (97%), Gaps = 0/138 (0%)

Query  1    MATMQCDVVSVKESIYSGQVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEE  60
            MATMQCDVVSVKESIYSG VTMLIAKGAGGELGILPGHAPLVTLLQPGPIRV LENGTEE
Sbjct  1    MATMQCDVVSVKESIYSGAVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVLLENGTEE  60

Query  61   IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALAS  120
            IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALA+
Sbjct  61   IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALAA  120

Query  121  LSEISGQLETIRKIKNRA  138
            L+E + QLETIRKIKNRA
Sbjct  121  LAETAAQLETIRKIKNRA  138


>A3M145 ATP synthase epsilon chain [Acinetobacter baumannii (strain 
ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377)]
Length=139

 Score = 249 bits (637),  Expect = 1e-90
 Identities = 131/138 (95%), Positives = 134/138 (97%), Gaps = 0/138 (0%)

Query  1    MATMQCDVVSVKESIYSGQVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEE  60
            MATMQCDVVSVKESIYSG VTMLIAKGAGGELGILPGHAPLVTLLQPGPIRV LENGTEE
Sbjct  1    MATMQCDVVSVKESIYSGAVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVLLENGTEE  60

Query  61   IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALAS  120
            IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALA+
Sbjct  61   IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALAA  120

Query  121  LSEISGQLETIRKIKNRA  138
            L+E + QLETIRKIKNRA
Sbjct  121  LAETAAQLETIRKIKNRA  138


>B2I103 ATP synthase epsilon chain [Acinetobacter baumannii (strain 
ACICU)]
Length=139

 Score = 249 bits (637),  Expect = 1e-90
 Identities = 131/138 (95%), Positives = 134/138 (97%), Gaps = 0/138 (0%)

Query  1    MATMQCDVVSVKESIYSGQVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEE  60
            MATMQCDVVSVKESIYSG VTMLIAKGAGGELGILPGHAPLVTLLQPGPIRV LENGTEE
Sbjct  1    MATMQCDVVSVKESIYSGAVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVLLENGTEE  60

Query  61   IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALAS  120
            IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALA+
Sbjct  61   IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALAA  120

Query  121  LSEISGQLETIRKIKNRA  138
            L+E + QLETIRKIKNRA
Sbjct  121  LAETAAQLETIRKIKNRA  138


>B7I1W5 ATP synthase epsilon chain [Acinetobacter baumannii (strain 
AB0057)]
Length=139

 Score = 249 bits (637),  Expect = 1e-90
 Identities = 131/138 (95%), Positives = 134/138 (97%), Gaps = 0/138 (0%)

Query  1    MATMQCDVVSVKESIYSGQVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEE  60
            MATMQCDVVSVKESIYSG VTMLIAKGAGGELGILPGHAPLVTLLQPGPIRV LENGTEE
Sbjct  1    MATMQCDVVSVKESIYSGAVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVLLENGTEE  60

Query  61   IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALAS  120
            IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALA+
Sbjct  61   IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALAA  120

Query  121  LSEISGQLETIRKIKNRA  138
            L+E + QLETIRKIKNRA
Sbjct  121  LAETAAQLETIRKIKNRA  138


>B7H293 ATP synthase epsilon chain [Acinetobacter baumannii (strain 
AB307-0294)]
Length=139

 Score = 249 bits (637),  Expect = 1e-90
 Identities = 131/138 (95%), Positives = 134/138 (97%), Gaps = 0/138 (0%)

Query  1    MATMQCDVVSVKESIYSGQVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEE  60
            MATMQCDVVSVKESIYSG VTMLIAKGAGGELGILPGHAPLVTLLQPGPIRV LENGTEE
Sbjct  1    MATMQCDVVSVKESIYSGAVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVLLENGTEE  60

Query  61   IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALAS  120
            IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALA+
Sbjct  61   IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALAA  120

Query  121  LSEISGQLETIRKIKNRA  138
            L+E + QLETIRKIKNRA
Sbjct  121  LAETAAQLETIRKIKNRA  138


>B0VNK5 ATP synthase epsilon chain [Acinetobacter baumannii (strain 
SDF)]
Length=139

 Score = 245 bits (625),  Expect = 8e-89
 Identities = 129/138 (93%), Positives = 133/138 (96%), Gaps = 0/138 (0%)

Query  1    MATMQCDVVSVKESIYSGQVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEE  60
            MATMQCDVVSVKES+YSG VTMLIAKGAGGELGILPGHAPLVTLLQ GPIRV LENGTEE
Sbjct  1    MATMQCDVVSVKESLYSGAVTMLIAKGAGGELGILPGHAPLVTLLQLGPIRVLLENGTEE  60

Query  61   IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALAS  120
            IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALA+
Sbjct  61   IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALAA  120

Query  121  LSEISGQLETIRKIKNRA  138
            L+E + QLETIRKIKNRA
Sbjct  121  LAETAAQLETIRKIKNRA  138


>Q4FQ38 ATP synthase epsilon chain [Psychrobacter arcticus (strain 
DSM 17307 / VKM B-2377 / 273-4)]
Length=138

 Score = 185 bits (469),  Expect = 5e-65
 Identities = 91/138 (66%), Positives = 112/138 (81%), Gaps = 0/138 (0%)

Query  1    MATMQCDVVSVKESIYSGQVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEE  60
            MAT+QC +VS +E +YSG+++MLIA G  GE+GILPGH PL+TLL+PG +RVQ  NG EE
Sbjct  1    MATLQCRIVSAREELYSGEISMLIASGTEGEIGILPGHTPLITLLKPGAMRVQTSNGEEE  60

Query  61   IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALAS  120
            ++YVSGGVLEVQP +VTVLADTA+RA NLDE+ I+EARK AEQ+L NQ   +   AALAS
Sbjct  61   VIYVSGGVLEVQPKMVTVLADTAMRAHNLDESKIVEARKKAEQMLVNQSDTVQINAALAS  120

Query  121  LSEISGQLETIRKIKNRA  138
            L+E   QL+TIRK KNRA
Sbjct  121  LAESVAQLQTIRKYKNRA  138


>Q1Q8A0 ATP synthase epsilon chain [Psychrobacter cryohalolentis 
(strain ATCC BAA-1226 / DSM 17306 / VKM B-2378 / K5)]
Length=138

 Score = 183 bits (465),  Expect = 2e-64
 Identities = 90/138 (65%), Positives = 113/138 (82%), Gaps = 0/138 (0%)

Query  1    MATMQCDVVSVKESIYSGQVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEE  60
            MAT+QC VVS +E +YSG+++MLIA G  GE+G+LPGH PL+TLL+PG +RVQ  +G EE
Sbjct  1    MATLQCRVVSAREELYSGEISMLIATGTEGEIGVLPGHTPLITLLKPGAMRVQTPDGEEE  60

Query  61   IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALAS  120
            ++YVSGGVLEVQP +VTVLADTA+RA NLDE+ I+EARK AEQ+L NQ   + + AALAS
Sbjct  61   VIYVSGGVLEVQPKMVTVLADTAMRAHNLDESKIVEARKKAEQMLVNQSDTVQTNAALAS  120

Query  121  LSEISGQLETIRKIKNRA  138
            L+E   QL+TIRK KNRA
Sbjct  121  LAESVAQLQTIRKYKNRA  138


>A5WBW2 ATP synthase epsilon chain [Psychrobacter sp. (strain 
PRwf-1)]
Length=138

 Score = 181 bits (460),  Expect = 1e-63
 Identities = 90/138 (65%), Positives = 114/138 (83%), Gaps = 0/138 (0%)

Query  1    MATMQCDVVSVKESIYSGQVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEE  60
            MAT+QC VVS +E IY+G+++MLIA G+ GE+GIL GH PL+TLL+PG +R+Q  +G EE
Sbjct  1    MATLQCRVVSAREEIYAGEISMLIATGSEGEVGILAGHTPLITLLKPGSMRIQTPDGNEE  60

Query  61   IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALAS  120
            ++YVSGGVLEVQP +VTVLADTA+RA +LDEA I+EARK AEQ+LANQ   L + AALAS
Sbjct  61   VIYVSGGVLEVQPKLVTVLADTAVRAHDLDEAKIVEARKKAEQMLANQTETLQTNAALAS  120

Query  121  LSEISGQLETIRKIKNRA  138
            L+E   QL+TIRK +NRA
Sbjct  121  LAESVAQLQTIRKYRNRA  138


>A6W3S7 ATP synthase epsilon chain [Marinomonas sp. (strain MWYL1)]
Length=139

 Score = 155 bits (392),  Expect = 2e-53
 Identities = 76/134 (57%), Positives = 103/134 (77%), Gaps = 0/134 (0%)

Query  3    TMQCDVVSVKESIYSGQVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEEIV  62
            T+ CD+VS ++ I+SG V  L+A G+ G+LGI+PGHAPL+T LQ GP+RV  ENG EE++
Sbjct  4    TVHCDIVSAEQEIFSGTVQSLVAAGSYGDLGIMPGHAPLLTTLQAGPVRVVKENGDEEVI  63

Query  63   YVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALASLS  122
            +VSGG LEVQPH VTVLA+TA RA +LDE A L+A+++A++LLANQK D+D   A A L 
Sbjct  64   FVSGGFLEVQPHRVTVLANTATRARDLDEEAALKAQEHAKELLANQKPDVDYTRATAELV  123

Query  123  EISGQLETIRKIKN  136
            E   +L TI++ +N
Sbjct  124  EAMARLRTIQQFRN  137


>B3PIS6 ATP synthase epsilon chain [Cellvibrio japonicus (strain 
Ueda107)]
Length=141

 Score = 152 bits (384),  Expect = 4e-52
 Identities = 75/136 (55%), Positives = 102/136 (75%), Gaps = 0/136 (0%)

Query  3    TMQCDVVSVKESIYSGQVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEEIV  62
            T+QCD+VS +  I+SG V M++A GA G+LG+  GHAPL+T + PGP+RV  + GTEEI 
Sbjct  4    TLQCDIVSAEREIFSGLVEMVVATGALGDLGVAYGHAPLLTSINPGPVRVIKQGGTEEIF  63

Query  63   YVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALASLS  122
            YVSGG LEVQP+ VTVLADTA+RA+++DEAA LEA++ A+  LA Q S++D   A   L+
Sbjct  64   YVSGGYLEVQPYHVTVLADTALRANDMDEAAALEAQERAQHQLAEQASEIDFQRAAVQLA  123

Query  123  EISGQLETIRKIKNRA  138
            E + QL T++ IK +A
Sbjct  124  EAAAQLRTLQAIKKKA  139


>A1U7H3 ATP synthase epsilon chain [Marinobacter nauticus (strain 
ATCC 700491 / DSM 11845 / VT8)]
Length=140

 Score = 150 bits (380),  Expect = 2e-51
 Identities = 75/133 (56%), Positives = 103/133 (77%), Gaps = 0/133 (0%)

Query  3    TMQCDVVSVKESIYSGQVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEEIV  62
            T+ CDVVS +E IYSG V MLIA G  GELGI  GHAPL++ L+PG +R+  + G+EEI+
Sbjct  4    TVHCDVVSAEEKIYSGLVEMLIATGTEGELGIQYGHAPLLSELKPGAVRIIKQGGSEEIL  63

Query  63   YVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALASLS  122
            YVSGG LEVQP++VT++ADTA+RA ++DEAA LEA+K AE+ LAN+  + + + A A L+
Sbjct  64   YVSGGYLEVQPNLVTLMADTAVRAKDVDEAAALEAQKQAEKALANKTGEFEYSRAAAELA  123

Query  123  EISGQLETIRKIK  135
            E + QL TI+K++
Sbjct  124  EAAAQLRTIQKLR  136


>Q1QSD1 ATP synthase epsilon chain [Chromohalobacter salexigens 
(strain ATCC BAA-138 / DSM 3043 / CIP 106854 / NCIMB 13768 
/ 1H11)]
Length=141

 Score = 150 bits (378),  Expect = 4e-51
 Identities = 75/137 (55%), Positives = 101/137 (74%), Gaps = 0/137 (0%)

Query  1    MATMQCDVVSVKESIYSGQVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEE  60
            MA+ QCD+VS +++I+SG    LIA G  G+LGIL GHAPL+T L+PGP+RV  E G EE
Sbjct  1    MASFQCDIVSAEKAIFSGSAEQLIAAGVSGDLGILRGHAPLLTELKPGPVRVMREGGEEE  60

Query  61   IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALAS  120
            + YV+GG LEVQP VV+VLADTA RA +LDEAA  EAR+ A + + +++SDLD   A A 
Sbjct  61   VYYVTGGFLEVQPDVVSVLADTATRAHDLDEAAAEEARQEALKAMGDKQSDLDYTRAAAE  120

Query  121  LSEISGQLETIRKIKNR  137
            L+E   QL TI++++ +
Sbjct  121  LAEAVAQLRTIQQLREK  137


>P0A6E6 ATP synthase epsilon chain [Escherichia coli (strain K12)]
Length=139

 Score = 128 bits (322),  Expect = 1e-42
 Identities = 65/133 (49%), Positives = 91/133 (68%), Gaps = 0/133 (0%)

Query  3    TMQCDVVSVKESIYSGQVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEEIV  62
            T   DVVS ++ ++SG V  +   G+ GELGI PGHAPL+T ++PG IR+  ++G EE +
Sbjct  4    TYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFI  63

Query  63   YVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALASLS  122
            Y+SGG+LEVQP  VTVLADTAIR  +LDEA  +EA++ AE+ +++   D+D A A A L+
Sbjct  64   YLSGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELA  123

Query  123  EISGQLETIRKIK  135
            +   QL  I   K
Sbjct  124  KAIAQLRVIELTK  136


>P12988 ATP synthase epsilon chain [Vibrio alginolyticus]
Length=140

 Score = 126 bits (316),  Expect = 9e-42
 Identities = 63/135 (47%), Positives = 88/135 (65%), Gaps = 0/135 (0%)

Query  3    TMQCDVVSVKESIYSGQVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEEIV  62
            T   DVVS ++ I+SG+V      G+ GELGI  GH PL+T ++PG +R+  ++G EEI+
Sbjct  5    TFHLDVVSAEKKIFSGRVETFQVTGSEGELGIFHGHTPLLTAIKPGMVRIVKQHGHEEII  64

Query  63   YVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALASLS  122
            YVSGG++E+QP   TVLADTAIR + LD A   EA++ AE+ + NQ  D+D A A + L+
Sbjct  65   YVSGGMVEIQPGTATVLADTAIRGEELDAAKAEEAKRRAEEQIQNQHGDMDFAQAASELA  124

Query  123  EISGQLETIRKIKNR  137
            +   QL  I   K R
Sbjct  125  KAIAQLRVIELTKKR  139


>P41171 ATP synthase epsilon chain [Acidithiobacillus ferridurans]
Length=141

 Score = 114 bits (285),  Expect = 4e-37
 Identities = 60/135 (44%), Positives = 92/135 (68%), Gaps = 1/135 (1%)

Query  3    TMQCDVVSVKESIYSGQVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEEIV  62
            T+   VVS + SIY+G   M++A G  GELGILP HAPL+T L+PG +R+ +     E +
Sbjct  4    TIDVRVVSAEGSIYAGVADMVVAPGEMGELGILPRHAPLLTGLRPGELRI-IHGAETEYL  62

Query  63   YVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALASLS  122
            +V+GG+LE+QP +VTVLAD+A RA ++DEA  L A++ AE  +A     ++ AAA A L 
Sbjct  63   FVNGGILEIQPDMVTVLADSAERATDIDEAKALAAKQAAEARMAGHTDQMEYAAAQAELL  122

Query  123  EISGQLETIRKIKNR  137
            E   +L+T+++++ +
Sbjct  123  EQIARLKTVQRLREQ  137


>O51871 ATP synthase epsilon chain [Buchnera aphidicola subsp. 
Schizaphis graminum (strain Sg)]
Length=138

 Score = 105 bits (262),  Expect = 1e-33
 Identities = 50/125 (40%), Positives = 83/125 (66%), Gaps = 0/125 (0%)

Query  7    DVVSVKESIYSGQVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEEIVYVSG  66
            D+VSV++ I+SG V  +   G+ GE+GI PGH  L+++++PG I +  +N TEE +Y+SG
Sbjct  6    DIVSVEKRIFSGLVDRIQVSGSEGEMGIYPGHTQLLSIIKPGVIYIFHKNKTEECLYISG  65

Query  67   GVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALASLSEISG  126
            G+LEVQP VV++LAD AIR  +LD   +++A+K AE+    + +++     L  +S+   
Sbjct  66   GILEVQPSVVSILADVAIRGIDLDRKRVVKAKKQAEEYFKKETTNVKKDDVLLEISKAIA  125

Query  127  QLETI  131
            +L  +
Sbjct  126  KLRVL  130


>P12699 ATP synthase epsilon chain [Priestia megaterium (strain 
ATCC 12872 / QMB1551)]
Length=134

 Score = 88.2 bits (217),  Expect = 7e-27
 Identities = 51/129 (40%), Positives = 75/129 (58%), Gaps = 1/129 (1%)

Query  1    MATMQCDVVSVKESIYSGQVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEE  60
            M T+   VV+    +Y  +V M+  +   GELGIL GH P+V  LQ G +R++  + TE 
Sbjct  1    MKTIHVSVVTPDGPVYESEVEMVSTRAQSGELGILHGHIPMVAPLQIGAVRLKKASSTE-  59

Query  61   IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALAS  120
            +V VSGG LEV+P  VT+LA  A  A+ +D A   EA+K AE  L +++ D+D   A  +
Sbjct  60   LVAVSGGFLEVRPDKVTILAQAAETAEEIDVARAEEAKKRAEMRLDSKQDDVDVKRAEIA  119

Query  121  LSEISGQLE  129
            L     +L+
Sbjct  120  LKRAVNRLD  128


>O05434 ATP synthase epsilon chain [Moorella thermoacetica (strain 
ATCC 39073 / JCM 9320)]
Length=134

 Score = 85.9 bits (211),  Expect = 5e-26
 Identities = 48/129 (37%), Positives = 73/129 (57%), Gaps = 0/129 (0%)

Query  1    MATMQCDVVSVKESIYSGQVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEE  60
            MA++  ++++ +  +   +   +IA G  G LG+LP HAPL+T LQ G +  +     EE
Sbjct  1    MASLNLEIITPERVVLQAEAASVIAPGIQGYLGVLPEHAPLITPLQAGVVTCRRRERAEE  60

Query  61   IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALAS  120
             V VSGG LE  P  V +LADTA R++ +D     +AR+ AE+ L  +   LD A A A+
Sbjct  61   RVAVSGGFLEAGPDQVIILADTAERSEEIDVEWARQARERAERRLRERPPGLDVARAEAA  120

Query  121  LSEISGQLE  129
            L     +L+
Sbjct  121  LRRAVARLK  129


>P37812 ATP synthase epsilon chain [Bacillus subtilis (strain 
168)]
Length=132

 Score = 83.6 bits (205),  Expect = 4e-25
 Identities = 46/133 (35%), Positives = 76/133 (57%), Gaps = 1/133 (1%)

Query  1    MATMQCDVVSVKESIYSGQVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEE  60
            M T++ ++V+    +Y   + M+  +   G+LGILPGH P V  L+ G +R++ ++G  E
Sbjct  1    MKTVKVNIVTPDGPVYDADIEMVSVRAESGDLGILPGHIPTVAPLKIGAVRLK-KDGQTE  59

Query  61   IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALAS  120
            +V VSGG +EV+P  VT+LA  A  A+ +D+     AR+ A++ L +Q  D D   A  +
Sbjct  60   MVAVSGGFVEVRPDHVTILAQAAETAEGIDKERAEAARQRAQERLNSQSDDTDIRRAELA  119

Query  121  LSEISGQLETIRK  133
            L     +L+   K
Sbjct  120  LQRALNRLDVAGK  132


>P07678 ATP synthase epsilon chain [Bacillus sp. (strain PS3)]
Length=132

 Score = 80.1 bits (196),  Expect = 9e-24
 Identities = 49/128 (38%), Positives = 71/128 (55%), Gaps = 2/128 (2%)

Query  1    MATMQCDVVSVKESIYSGQVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEE  60
            M T+   VV+    +Y   V M+  K   GELGILPGH PLV  L+    R++ + G  +
Sbjct  1    MKTIHVSVVTPDGPVYEDDVEMVSVKAKSGELGILPGHIPLVAPLEISAARLK-KGGKTQ  59

Query  61   IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALAS  120
             + VSGG LEV+P  VT+LA  A RA+++D     +ARK+    L +Q+ D+D   A  +
Sbjct  60   YIAVSGGFLEVRPDNVTILAQAAERAEDID-VLRAKARKSGRTPLQSQQDDIDFKRAELA  118

Query  121  LSEISGQL  128
            L     +L
Sbjct  119  LKRAMNRL  126


>P22480 ATP synthase epsilon chain [Alkalihalophilus pseudofirmus 
(strain ATCC BAA-2126 / JCM 17055 / OF4)]
Length=133

 Score = 78.6 bits (192),  Expect = 4e-23
 Identities = 50/134 (37%), Positives = 75/134 (56%), Gaps = 2/134 (1%)

Query  1    MATMQCDVVSVKESIYSGQVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEE  60
            M+T++ +VV+    +Y G V M++ +   GELGILP H PLV  L  G +R++  N +EE
Sbjct  1    MSTIRVNVVTPDGKVYDGDVDMVVVRTVEGELGILPKHIPLVAPLTVGAVRLKKGN-SEE  59

Query  61   IVYVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSD-LDSAAALA  119
             V VSGG +EV+P  VT+LA+ A     +D      A++ AE  L + K D +D   A  
Sbjct  60   QVAVSGGFVEVRPDQVTILAEAAELPSAIDVDRARAAKERAESRLNSTKQDAVDFKRAEL  119

Query  120  SLSEISGQLETIRK  133
            +L     +L+   K
Sbjct  120  ALKRAINRLDVTGK  133


>Q9S5B5 ATP synthase epsilon chain [Desulfovibrio vulgaris (strain 
DSM 19637 / Miyazaki F)]
Length=134

 Score = 75.9 bits (185),  Expect = 4e-22
 Identities = 45/126 (36%), Positives = 71/126 (56%), Gaps = 1/126 (1%)

Query  3    TMQCDVVSVKESIYSGQVTMLIAKGAGGELGILPGHAPLVTLLQPGPIRVQLENGTEEIV  62
            ++  ++V+    + S +V  + A G  GE GILP H P ++ L  G +  +   G    +
Sbjct  4    SLHLEIVTPDRLVLSEKVDYVGAPGYEGEFGILPNHIPFLSALNIGSLYYKA-GGKTHWI  62

Query  63   YVSGGVLEVQPHVVTVLADTAIRADNLDEAAILEARKNAEQLLANQKSDLDSAAALASLS  122
            +VSGG  EV  + VTVLA++A RA+++D     +A++ AEQ LA  K  LDSA A A+L 
Sbjct  63   FVSGGFAEVSDNKVTVLAESAERAEDIDLERARKAKERAEQRLAQAKEKLDSARAQAALQ  122

Query  123  EISGQL  128
                ++
Sbjct  123  RAMARM  128



Lambda      K        H        a         alpha
   0.318    0.134    0.360    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 258825


  Database: 18992cae4ec6b79fc05825c45711f5cd.SwissProt.fasta
    Posted date:  Jun 3, 2024  10:38 AM
  Number of letters in database: 3,305
  Number of sequences in database:  24



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40