BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 7e84e40486d7150dee0ec7ec47b3ce97.SwissProt.fasta
2 sequences; 1,490 total letters
Query= ACIAD0214
Length=663
Score E
Sequences producing significant alignments: (Bits) Value
P05825 Ferrienterobactin receptor [Escherichia coli (strain K12)] 39.3 9e-07
P44523 TonB-dependent heme receptor A [Haemophilus influenzae (st... 37.4 4e-06
>P05825 Ferrienterobactin receptor [Escherichia coli (strain K12)]
Length=746
Score = 39.3 bits (90), Expect = 9e-07
Identities = 39/134 (29%), Positives = 57/134 (43%), Gaps = 22/134 (16%)
Query 38 IVVTA--QDTKTANGLIVEADP--KQPIQPVPATDGADYLQSIMGFNAIKNGAT-----N 88
IVVTA Q+ + + AD K P+ A D + ++++ G N N + N
Sbjct 36 IVVTAAEQNLQAPGVSTITADEIRKNPV----ARDVSKIIRTMPGVNLTGNSTSGQRGNN 91
Query 89 GDVTFRGMFGSRIKILTDGTENLGACPARMD--------APTSYINPESYDRITVIKGPQ 140
+ RGM IL DG R TS++ PE +RI V++GP
Sbjct 92 RQIDIRGMGPENTLILIDGKPVSSRNSVRQGWRGERDTRGDTSWVPPEMIERIEVLRGPA 151
Query 141 TVRYANTGSAATVI 154
RY N G+A V+
Sbjct 152 AARYGN-GAAGGVV 164
Score = 29.3 bits (64), Expect = 0.001
Identities = 20/98 (20%), Positives = 39/98 (40%), Gaps = 6/98 (6%)
Query 571 WRAVAEQNRISLNEGNIVGYDMSKSKGFSTFAINAAYQYSEVLGFSTGIDNLLDKTYSEH 630
W + + + VG + + +S ++A + ++ + + G+DNL DK
Sbjct 649 WYGKQQPKKYNYKGQPAVGPETKEISPYSIVGLSATWDVTKNVSLTGGVDNLFDKRLWRA 708
Query 631 LNK------SGAALFGYAANEQFNNVGRNYWARVSMKF 662
N +GA A +N GR ++ V+ F
Sbjct 709 GNAQTTGDLAGANYIAGAGAYTYNEPGRTWYMSVNTHF 746
Score = 20.0 bits (40), Expect = 0.81
Identities = 30/148 (20%), Positives = 49/148 (33%), Gaps = 23/148 (16%)
Query 305 PPMMPMAMEVTRRTLNARAAITTEWDRLNVISG-------------VDSQRNKHAGNMYM 351
PP M +EV R AR +N+I+ ++ +K G
Sbjct 137 PPEMIERIEVLRGPAAARYGNGAAGGVVNIITKKGSGEWHGSWDAYFNAPEHKEEGATKR 196
Query 352 RDANPIPPLDGDLRFESYGAFSEW---TYRLNPNHKLVAGGRFDHVKVDSAE-------N 401
+ + PL + F YG + + +N H+ G + E N
Sbjct 197 TNFSLTGPLGDEFSFRLYGNLDKTQADAWDINQGHQSARAGTYATTLPAGREGVINKDIN 256
Query 402 DQQRTDTNPSGFIRIESHHPHGLNTYAG 429
R D P + +E+ + N YAG
Sbjct 257 GVVRWDFAPLQSLELEAGYSRQGNLYAG 284
>P44523 TonB-dependent heme receptor A [Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=744
Score = 37.4 bits (85), Expect = 4e-06
Identities = 35/139 (25%), Positives = 62/139 (45%), Gaps = 20/139 (14%)
Query 529 DLSAMYAWGENTTDHKPLPQIAPLEGRLNLRYVQEKYSLGLLWRA--VAEQNRISLN-EG 585
D S WG+ +T + +I P + L + KY L + WRA V Q+R L+ +
Sbjct 621 DTSPRNPWGKTSTW---IAEIPPRKATTALGFNVPKYYLTVGWRAEFVRRQDRSPLSGDP 677
Query 586 NIVGYDMSKSKGFSTFAINAAYQYSEVLGFSTGI--DNLLDKTYSEHLNKSGAALFGYAA 643
+ + S+G+S + ++ +++ G + I DNL ++ Y+ +L
Sbjct 678 KASSWSLPASRGYSLHNLFLSWSPAKIKGMNVKITVDNLFNRAYNPYL------------ 725
Query 644 NEQFNNVGRNYWARVSMKF 662
E + GRN +S KF
Sbjct 726 GELASGTGRNIKFSLSQKF 744
Score = 33.5 bits (75), Expect = 6e-05
Identities = 39/154 (25%), Positives = 66/154 (43%), Gaps = 11/154 (7%)
Query 6 FLLQPMTAAILIATASTFANAQDDIQTKKMAPIVVTAQDTKTANGLIVEADPKQP-IQPV 64
FLL + L TA ++ + +++ PI+V D +N L + KQ I+
Sbjct 10 FLLVTLVGIQLNVTAKQNSSNSN---REELLPIIVNTNDD--SNKLPGRSVLKQKNIEQX 64
Query 65 PATDGADYLQSIMGFNAIKNGATNGD-VTFRGMFGSR-IKILTDGTENLGACPARMDAPT 122
A + A+ + + G N G + GM + +++ DG + +
Sbjct 65 QADNAANLINILPGVNMAGGFRPGGQTLNINGMGDAEDVRVQLDGATKSFE---KYQQGS 121
Query 123 SYINPESYDRITVIKGPQTVRYANTGSAATVIFD 156
+I PE R+TV KG + +Y N G A TV F+
Sbjct 122 IFIEPELLRRVTVDKGNYSPQYGNGGFAGTVKFE 155
Score = 18.9 bits (37), Expect = 1.8
Identities = 10/45 (22%), Positives = 18/45 (40%), Gaps = 0/45 (0%)
Query 53 VEADPKQPIQPVPATDGADYLQSIMGFNAIKNGATNGDVTFRGMF 97
+ DPK +PA+ G + ++ K N +T +F
Sbjct 673 LSGDPKASSWSLPASRGYSLHNLFLSWSPAKIKGMNVKITVDNLF 717
Score = 17.7 bits (34), Expect = 4.1
Identities = 7/24 (29%), Positives = 14/24 (58%), Gaps = 0/24 (0%)
Query 563 EKYSLGLLWRAVAEQNRISLNEGN 586
EKY G ++ R+++++GN
Sbjct 115 EKYQQGSIFIEPELLRRVTVDKGN 138
Score = 17.3 bits (33), Expect = 5.4
Identities = 8/22 (36%), Positives = 11/22 (50%), Gaps = 0/22 (0%)
Query 274 QKNLTDVIKKVEAQVDYSYNDH 295
QKNL + A DYS ++
Sbjct 444 QKNLALKYNDISAGHDYSQKNY 465
Score = 16.9 bits (32), Expect = 7.1
Identities = 9/29 (31%), Positives = 12/29 (41%), Gaps = 1/29 (3%)
Query 457 KTTQLDLGFEFEQGALTSWVSAYAGLIND 485
K + G ++ Q W S Y GL D
Sbjct 450 KYNDISAGHDYSQKNYNGW-SYYLGLNYD 477
Score = 16.5 bits (31), Expect = 9.4
Identities = 7/20 (35%), Positives = 10/20 (50%), Gaps = 0/20 (0%)
Query 488 LVPYQSNPNGSVTILPARNI 507
L+P N N LP R++
Sbjct 36 LLPIIVNTNDDSNKLPGRSV 55
Score = 16.5 bits (31), Expect = 9.4
Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Query 431 GYVERSPDYWEISRVSNN-LLNYLNTEKTTQLDLGFEFEQGALTSWVSAY 479
G V + DY R N+ +L N +KT + L ++ L + S Y
Sbjct 205 GSVRNAGDY---KRPDNSKILFSKNNQKTGLIKLNWQISPEHLLTLSSVY 251
Score = 16.5 bits (31), Expect = 9.4
Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 6/37 (16%)
Query 213 NGDSVHSSWERWNA------DLALGWKPTQDSWIELK 243
+GD SSW + +L L W P + + +K
Sbjct 674 SGDPKASSWSLPASRGYSLHNLFLSWSPAKIKGMNVK 710
Lambda K H a alpha
0.316 0.132 0.394 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 867838
Database: 7e84e40486d7150dee0ec7ec47b3ce97.SwissProt.fasta
Posted date: May 20, 2024 7:38 AM
Number of letters in database: 1,490
Number of sequences in database: 2
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
