BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: dd5be6beeb67e45f24359cd8867b5dfe.TrEMBL.fasta
2 sequences; 79 total letters
Query= ACIAD0224
Length=45
Score E
Sequences producing significant alignments: (Bits) Value
Q6FFG5 Uncharacterized protein [Acinetobacter baylyi (strain ATCC... 95.5 5e-34
A0A0D5YM17 Uncharacterized protein [Acinetobacter baumannii] 32.3 5e-09
>Q6FFG5 Uncharacterized protein [Acinetobacter baylyi (strain
ATCC 33305 / BD413 / ADP1)]
Length=44
Score = 95.5 bits (236), Expect = 5e-34
Identities = 44/44 (100%), Positives = 44/44 (100%), Gaps = 0/44 (0%)
Query 1 MHLPMYLLKCNQIPLLIALCPVIGATTKSEYCRASDLKAWDSQL 44
MHLPMYLLKCNQIPLLIALCPVIGATTKSEYCRASDLKAWDSQL
Sbjct 1 MHLPMYLLKCNQIPLLIALCPVIGATTKSEYCRASDLKAWDSQL 44
>A0A0D5YM17 Uncharacterized protein [Acinetobacter baumannii]
Length=35
Score = 32.3 bits (72), Expect = 5e-09
Identities = 16/21 (76%), Positives = 16/21 (76%), Gaps = 0/21 (0%)
Query 14 PLLIALCPVIGATTKSEYCRA 34
PLL A PVIG TTKSEY RA
Sbjct 5 PLLSAYRPVIGVTTKSEYYRA 25
Lambda K H a alpha
0.337 0.144 0.498 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 2911
Database: dd5be6beeb67e45f24359cd8867b5dfe.TrEMBL.fasta
Posted date: Jun 3, 2024 5:24 PM
Number of letters in database: 79
Number of sequences in database: 2
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40