BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: eb3699cc655649390cd4942b55c640a3.TrEMBL.fasta
19 sequences; 8,772 total letters
Query= ACIAD0225
Length=352
Score E
Sequences producing significant alignments: (Bits) Value
A0A7G2SID3 DNA polymerase IV [Acinetobacter sp] 695 0.0
A0A0M1I7P5 DNA polymerase IV [Acinetobacter sp. C15] 579 0.0
A0A3R8ZWC8 DNA polymerase IV [Acinetobacter soli] 579 0.0
N9BZC8 DNA polymerase IV [Acinetobacter soli NIPH 2899] 579 0.0
A0A1P8ELH5 DNA polymerase IV [Acinetobacter soli] 578 0.0
N9C3M8 DNA polymerase IV [Acinetobacter ursingii ANC 3649] 558 0.0
A0A427PSM6 DNA polymerase IV [Acinetobacter sp. FDAARGOS_515] 558 0.0
A0A009YDF8 DNA polymerase IV [Acinetobacter sp. 479375] 556 0.0
A0A3A8EGE1 DNA polymerase IV [Acinetobacter guerrae] 556 0.0
E3VXA8 DNA polymerase IV [Deinococcus ficus] 239 7e-80
E3VXB0 DNA polymerase IV [Deinococcus ficus] 198 3e-64
Q5Q9H5 DNA polymerase kappa [Mus musculus] 193 6e-61
Q5Q9H0 DNA polymerase kappa [Mus musculus] 193 8e-61
Q5Q9H6 DNA polymerase kappa [Mus musculus] 194 5e-59
Q5Q9H7 DNA polymerase kappa [Mus musculus] 191 1e-57
Q5Q9H2 DNA polymerase kappa [Mus musculus] 116 5e-32
Q5Q9H8 DNA polymerase kappa [Mus musculus] 116 7e-32
Q8AWW1 DNA polymerase kappa [Gallus gallus] 116 1e-31
Q5Q9H1 DNA polymerase kappa [Mus musculus] 113 9e-31
>A0A7G2SID3 DNA polymerase IV [Acinetobacter sp]
Length=351
Score = 695 bits (1794), Expect = 0.0
Identities = 349/351 (99%), Positives = 350/351 (99%), Gaps = 0/351 (0%)
Query 1 MRKIIHIDMDAFYASVELRERPELKTLPVVISSHHPRAVIAAASYPARVYGLRSAMPMGQ 60
MRKIIHIDMDAFYASVELRERPELKTLPVVISSHHPRAVIAAASYPARVYGLRSAMPMGQ
Sbjct 1 MRKIIHIDMDAFYASVELRERPELKTLPVVISSHHPRAVIAAASYPARVYGLRSAMPMGQ 60
Query 61 ARKLCPDLIIIEPNFDKYRAVSHQIHQIFQQHTHIIEPLSLDEAYLDVTENLNNLPSATD 120
ARKLCPDLIIIEPNFDKYRAVSHQIHQIFQQHTHIIEPLSLDEAYLDVTENLNNLPSATD
Sbjct 61 ARKLCPDLIIIEPNFDKYRAVSHQIHQIFQQHTHIIEPLSLDEAYLDVTENLNNLPSATD 120
Query 121 VAIQIRQQIWEQTSLTASAGVAPNKFLAKIASDWNKPNGLCVIKPHQVMQFIQNLPLKKI 180
VAIQIRQQIWEQTSLTASAGVAPNKFLAKIASDWNKPNG+CVIKPHQVMQFIQNLPLKKI
Sbjct 121 VAIQIRQQIWEQTSLTASAGVAPNKFLAKIASDWNKPNGICVIKPHQVMQFIQNLPLKKI 180
Query 181 PGVGRVTQDKLQQLKLETLGDLQHIEEAVLIQHFGKYGKQLYLYAQGIDHRSVQAERVRQ 240
PGVGRVTQDKLQQLKLETLGDLQHIEEAVLIQHFGKYGKQLYLYAQGIDHRSVQAERVRQ
Sbjct 181 PGVGRVTQDKLQQLKLETLGDLQHIEEAVLIQHFGKYGKQLYLYAQGIDHRSVQAERVRQ 240
Query 241 QISKETTFDQDLYLHECSSYWLMLAEKVWQSLQNKNLQARGVNIKLKNKHFQVFQHSKSF 300
QISKETTFDQDLYLHECSSYWLMLAEKVWQSLQNKNLQARGVNIKLKNKHFQVFQHSKSF
Sbjct 241 QISKETTFDQDLYLHECSSYWLMLAEKVWQSLQNKNLQARGVNIKLKNKHFQVFQHSKSF 300
Query 301 KRALQSLDEFKSVLALLLQEISLTLDDQYRLIGVGLYQLSPSASESQLTLW 351
KRALQSLDEFKSVLALLLQEISLTLDDQYRLIG GLYQLSPSASESQLTLW
Sbjct 301 KRALQSLDEFKSVLALLLQEISLTLDDQYRLIGDGLYQLSPSASESQLTLW 351
>A0A0M1I7P5 DNA polymerase IV [Acinetobacter sp. C15]
Length=351
Score = 579 bits (1493), Expect = 0.0
Identities = 289/351 (82%), Positives = 313/351 (89%), Gaps = 0/351 (0%)
Query 1 MRKIIHIDMDAFYASVELRERPELKTLPVVISSHHPRAVIAAASYPARVYGLRSAMPMGQ 60
MRKIIHIDMDAFYASVELRERPEL+ LPVVISSHHPRAVIAAASYPAR YGLRSAMPMGQ
Sbjct 1 MRKIIHIDMDAFYASVELRERPELQHLPVVISSHHPRAVIAAASYPARRYGLRSAMPMGQ 60
Query 61 ARKLCPDLIIIEPNFDKYRAVSHQIHQIFQQHTHIIEPLSLDEAYLDVTENLNNLPSATD 120
ARKLCPDLI+IEPNF+KYRAVS QIH +FQQ+T +IEPLSLDEAYLDVTENL LPSATD
Sbjct 61 ARKLCPDLIVIEPNFEKYRAVSQQIHHVFQQYTSLIEPLSLDEAYLDVTENLKQLPSATD 120
Query 121 VAIQIRQQIWEQTSLTASAGVAPNKFLAKIASDWNKPNGLCVIKPHQVMQFIQNLPLKKI 180
VAI IRQ IW T LTASAGVAPNKFLAKIASDWNKPNGLCVIKPHQVM FI++LPLKKI
Sbjct 121 VAIHIRQDIWNLTHLTASAGVAPNKFLAKIASDWNKPNGLCVIKPHQVMDFIRDLPLKKI 180
Query 181 PGVGRVTQDKLQQLKLETLGDLQHIEEAVLIQHFGKYGKQLYLYAQGIDHRSVQAERVRQ 240
PGVGRVTQ KLQQLKLETLGDLQHI+EAVLI+HFGKYGKQLYLYAQGIDHR VQ+ERVRQ
Sbjct 181 PGVGRVTQAKLQQLKLETLGDLQHIDEAVLIRHFGKYGKQLYLYAQGIDHRVVQSERVRQ 240
Query 241 QISKETTFDQDLYLHECSSYWLMLAEKVWQSLQNKNLQARGVNIKLKNKHFQVFQHSKSF 300
QISKETTFDQ+LYL EC YW +LAEKVW SLQ+K LQARG++IKLK FQ+FQHSKSF
Sbjct 241 QISKETTFDQNLYLSECDIYWRLLAEKVWLSLQHKQLQARGISIKLKTPDFQIFQHSKSF 300
Query 301 KRALQSLDEFKSVLALLLQEISLTLDDQYRLIGVGLYQLSPSASESQLTLW 351
KRAL SL+EF+ L +LL E+ L QYRLIGVG+YQL P S+SQL+ W
Sbjct 301 KRALASLEEFQHALGVLLTEMQLQPAAQYRLIGVGVYQLGPRESDSQLSFW 351
>A0A3R8ZWC8 DNA polymerase IV [Acinetobacter soli]
Length=351
Score = 579 bits (1492), Expect = 0.0
Identities = 289/351 (82%), Positives = 312/351 (89%), Gaps = 0/351 (0%)
Query 1 MRKIIHIDMDAFYASVELRERPELKTLPVVISSHHPRAVIAAASYPARVYGLRSAMPMGQ 60
MRKIIHIDMDAFYASVELRERPEL+ LPVVISSHHPRAVIAAASYPAR YGLRSAMPMGQ
Sbjct 1 MRKIIHIDMDAFYASVELRERPELQHLPVVISSHHPRAVIAAASYPARRYGLRSAMPMGQ 60
Query 61 ARKLCPDLIIIEPNFDKYRAVSHQIHQIFQQHTHIIEPLSLDEAYLDVTENLNNLPSATD 120
ARKLCPDLI+IEPNF+KYRAVS QIH +FQQ+T +IEPLSLDEAYLDVTENL LPSATD
Sbjct 61 ARKLCPDLIVIEPNFEKYRAVSQQIHHVFQQYTSLIEPLSLDEAYLDVTENLKQLPSATD 120
Query 121 VAIQIRQQIWEQTSLTASAGVAPNKFLAKIASDWNKPNGLCVIKPHQVMQFIQNLPLKKI 180
VAI IRQ IW T LTASAGVAPNKFLAKIASDWNKPNGLCVIKPHQVM FI++LPLKKI
Sbjct 121 VAIHIRQDIWNLTHLTASAGVAPNKFLAKIASDWNKPNGLCVIKPHQVMDFIRDLPLKKI 180
Query 181 PGVGRVTQDKLQQLKLETLGDLQHIEEAVLIQHFGKYGKQLYLYAQGIDHRSVQAERVRQ 240
PGVGRVTQ KLQQLKLETLGDLQHI+EAVLI HFGKYGKQLYLYAQGIDHR VQ+ERVRQ
Sbjct 181 PGVGRVTQAKLQQLKLETLGDLQHIDEAVLIHHFGKYGKQLYLYAQGIDHRVVQSERVRQ 240
Query 241 QISKETTFDQDLYLHECSSYWLMLAEKVWQSLQNKNLQARGVNIKLKNKHFQVFQHSKSF 300
QISKETTFDQ+LYL EC YW +LAEKVW SLQ+K LQARG++IKLK FQ+FQHSKSF
Sbjct 241 QISKETTFDQNLYLSECDIYWRLLAEKVWLSLQHKQLQARGISIKLKTPDFQIFQHSKSF 300
Query 301 KRALQSLDEFKSVLALLLQEISLTLDDQYRLIGVGLYQLSPSASESQLTLW 351
KRAL SL+EF+ L +LL E+ L QYRLIGVG+YQL P S+SQL+ W
Sbjct 301 KRALASLEEFQHALGVLLTEMQLQPAAQYRLIGVGVYQLGPRESDSQLSFW 351
>N9BZC8 DNA polymerase IV [Acinetobacter soli NIPH 2899]
Length=351
Score = 579 bits (1492), Expect = 0.0
Identities = 289/351 (82%), Positives = 312/351 (89%), Gaps = 0/351 (0%)
Query 1 MRKIIHIDMDAFYASVELRERPELKTLPVVISSHHPRAVIAAASYPARVYGLRSAMPMGQ 60
MRKIIHIDMDAFYASVELRERPEL+ LPVVISSHHPRAVIAAASYPAR YGLRSAMPMGQ
Sbjct 1 MRKIIHIDMDAFYASVELRERPELQHLPVVISSHHPRAVIAAASYPARRYGLRSAMPMGQ 60
Query 61 ARKLCPDLIIIEPNFDKYRAVSHQIHQIFQQHTHIIEPLSLDEAYLDVTENLNNLPSATD 120
ARKLCPDLI+IEPNF+KYRAVS QIH +FQQ+T +IEPLSLDEAYLDVTENL LPSATD
Sbjct 61 ARKLCPDLIVIEPNFEKYRAVSQQIHHVFQQYTSLIEPLSLDEAYLDVTENLKQLPSATD 120
Query 121 VAIQIRQQIWEQTSLTASAGVAPNKFLAKIASDWNKPNGLCVIKPHQVMQFIQNLPLKKI 180
VAI IRQ IW T LTASAGVAPNKFLAKIASDWNKPNGLCVIKPHQVM FI++LPLKKI
Sbjct 121 VAIHIRQDIWNLTHLTASAGVAPNKFLAKIASDWNKPNGLCVIKPHQVMDFIRDLPLKKI 180
Query 181 PGVGRVTQDKLQQLKLETLGDLQHIEEAVLIQHFGKYGKQLYLYAQGIDHRSVQAERVRQ 240
PGVGRVTQ KLQQLKLETLGDLQHI+EAVLI HFGKYGKQLYLYAQGIDHR VQ+ERVRQ
Sbjct 181 PGVGRVTQAKLQQLKLETLGDLQHIDEAVLIHHFGKYGKQLYLYAQGIDHRVVQSERVRQ 240
Query 241 QISKETTFDQDLYLHECSSYWLMLAEKVWQSLQNKNLQARGVNIKLKNKHFQVFQHSKSF 300
QISKETTFDQ+LYL EC YW +LAEKVW SLQ+K LQARG++IKLK FQ+FQHSKSF
Sbjct 241 QISKETTFDQNLYLSECDIYWRLLAEKVWLSLQHKQLQARGISIKLKTPDFQIFQHSKSF 300
Query 301 KRALQSLDEFKSVLALLLQEISLTLDDQYRLIGVGLYQLSPSASESQLTLW 351
KRAL SL+EF+ L +LL E+ L QYRLIGVG+YQL P S+SQL+ W
Sbjct 301 KRALASLEEFQHALGVLLTEMQLQPAAQYRLIGVGVYQLGPRESDSQLSFW 351
>A0A1P8ELH5 DNA polymerase IV [Acinetobacter soli]
Length=351
Score = 578 bits (1491), Expect = 0.0
Identities = 289/351 (82%), Positives = 312/351 (89%), Gaps = 0/351 (0%)
Query 1 MRKIIHIDMDAFYASVELRERPELKTLPVVISSHHPRAVIAAASYPARVYGLRSAMPMGQ 60
MRKIIHIDMDAFYASVELRERPEL+ LPVVISSHHPRAVIAAASYPAR YGLRSAMPMGQ
Sbjct 1 MRKIIHIDMDAFYASVELRERPELQHLPVVISSHHPRAVIAAASYPARRYGLRSAMPMGQ 60
Query 61 ARKLCPDLIIIEPNFDKYRAVSHQIHQIFQQHTHIIEPLSLDEAYLDVTENLNNLPSATD 120
ARKLCPDLI+IEPNF+KYRAVS QIH +FQQ+T +IEPLSLDEAYLDVTENL LPSATD
Sbjct 61 ARKLCPDLIVIEPNFEKYRAVSQQIHHVFQQYTSLIEPLSLDEAYLDVTENLKQLPSATD 120
Query 121 VAIQIRQQIWEQTSLTASAGVAPNKFLAKIASDWNKPNGLCVIKPHQVMQFIQNLPLKKI 180
VAI IRQ IW T LTASAGVAPNKFLAKIASDWNKPNGLCVIKPHQVM FI++LPLKKI
Sbjct 121 VAIHIRQDIWNLTHLTASAGVAPNKFLAKIASDWNKPNGLCVIKPHQVMDFIRDLPLKKI 180
Query 181 PGVGRVTQDKLQQLKLETLGDLQHIEEAVLIQHFGKYGKQLYLYAQGIDHRSVQAERVRQ 240
PGVGRVTQ KLQQLKLETLGDLQHI+EAVLI HFGKYGKQLYLYAQGIDHR VQ+ERVRQ
Sbjct 181 PGVGRVTQAKLQQLKLETLGDLQHIDEAVLIHHFGKYGKQLYLYAQGIDHRVVQSERVRQ 240
Query 241 QISKETTFDQDLYLHECSSYWLMLAEKVWQSLQNKNLQARGVNIKLKNKHFQVFQHSKSF 300
QISKETTFDQ+LYL EC YW +LAEKVW SLQ+K LQARG++IKLK FQ+FQHSKSF
Sbjct 241 QISKETTFDQNLYLSECDIYWRLLAEKVWLSLQHKQLQARGISIKLKTPDFQIFQHSKSF 300
Query 301 KRALQSLDEFKSVLALLLQEISLTLDDQYRLIGVGLYQLSPSASESQLTLW 351
KRAL SL+EF+ L +LL E+ L QYRLIGVG+YQL P S+SQL+ W
Sbjct 301 KRALASLEEFQYALGVLLTEMQLQPAAQYRLIGVGVYQLGPRESDSQLSFW 351
>N9C3M8 DNA polymerase IV [Acinetobacter ursingii ANC 3649]
Length=353
Score = 558 bits (1437), Expect = 0.0
Identities = 281/351 (80%), Positives = 311/351 (89%), Gaps = 0/351 (0%)
Query 1 MRKIIHIDMDAFYASVELRERPELKTLPVVISSHHPRAVIAAASYPARVYGLRSAMPMGQ 60
MRKIIHIDMDAFYASVELRERPELK LPVVISSHHPRAVIAAASYPAR +GLRSAM MGQ
Sbjct 3 MRKIIHIDMDAFYASVELRERPELKHLPVVISSHHPRAVIAAASYPAREFGLRSAMSMGQ 62
Query 61 ARKLCPDLIIIEPNFDKYRAVSHQIHQIFQQHTHIIEPLSLDEAYLDVTENLNNLPSATD 120
ARKLCPD+I+IEPNF+KYRAVS QIHQIFQQ+T IIEPLSLDEAYLDVTEN NLPSATD
Sbjct 63 ARKLCPDVIVIEPNFEKYRAVSAQIHQIFQQYTAIIEPLSLDEAYLDVTENFKNLPSATD 122
Query 121 VAIQIRQQIWEQTSLTASAGVAPNKFLAKIASDWNKPNGLCVIKPHQVMQFIQNLPLKKI 180
VAIQIRQ I + T LTASAGVAPNKFLAKIASDWNKP+GLCVIKP QV FIQ+LPLKKI
Sbjct 123 VAIQIRQDILKVTGLTASAGVAPNKFLAKIASDWNKPDGLCVIKPSQVQAFIQDLPLKKI 182
Query 181 PGVGRVTQDKLQQLKLETLGDLQHIEEAVLIQHFGKYGKQLYLYAQGIDHRSVQAERVRQ 240
PGVGRVTQ+KLQQL+LETLGDLQ IEE VLI HFGKYGKQL+LYAQGIDHR+VQAER RQ
Sbjct 183 PGVGRVTQEKLQQLQLETLGDLQQIEENVLIHHFGKYGKQLFLYAQGIDHRTVQAERERQ 242
Query 241 QISKETTFDQDLYLHECSSYWLMLAEKVWQSLQNKNLQARGVNIKLKNKHFQVFQHSKSF 300
QISKETTFD DLYL+EC +YW LAEKVW +LQ+K L ARGV+IKLK K+FQ++QHSKSF
Sbjct 243 QISKETTFDGDLYLNECLAYWPPLAEKVWNNLQHKQLTARGVSIKLKLKNFQIYQHSKSF 302
Query 301 KRALQSLDEFKSVLALLLQEISLTLDDQYRLIGVGLYQLSPSASESQLTLW 351
KR +QS E +L +LL E+ L + QYRLIG+G+YQL+P A E+QL+LW
Sbjct 303 KRPIQSFAELLDILQVLLYEMHLPAEFQYRLIGMGVYQLAPQADENQLSLW 353
>A0A427PSM6 DNA polymerase IV [Acinetobacter sp. FDAARGOS_515]
Length=351
Score = 558 bits (1437), Expect = 0.0
Identities = 281/351 (80%), Positives = 311/351 (89%), Gaps = 0/351 (0%)
Query 1 MRKIIHIDMDAFYASVELRERPELKTLPVVISSHHPRAVIAAASYPARVYGLRSAMPMGQ 60
MRKIIHIDMDAFYASVELRERPELK LPVVISSHHPRAVIAAASYPAR +GLRSAM MGQ
Sbjct 1 MRKIIHIDMDAFYASVELRERPELKHLPVVISSHHPRAVIAAASYPAREFGLRSAMSMGQ 60
Query 61 ARKLCPDLIIIEPNFDKYRAVSHQIHQIFQQHTHIIEPLSLDEAYLDVTENLNNLPSATD 120
ARKLCPD+I+IEPNF+KYRAVS QIHQIFQQ+T IIEPLSLDEAYLDVTEN NLPSATD
Sbjct 61 ARKLCPDVIVIEPNFEKYRAVSAQIHQIFQQYTAIIEPLSLDEAYLDVTENFKNLPSATD 120
Query 121 VAIQIRQQIWEQTSLTASAGVAPNKFLAKIASDWNKPNGLCVIKPHQVMQFIQNLPLKKI 180
VAIQIRQ I + T LTASAGVAPNKFLAKIASDWNKP+GLCVIKP QV FIQ+LPLKKI
Sbjct 121 VAIQIRQDILKVTGLTASAGVAPNKFLAKIASDWNKPDGLCVIKPSQVQAFIQDLPLKKI 180
Query 181 PGVGRVTQDKLQQLKLETLGDLQHIEEAVLIQHFGKYGKQLYLYAQGIDHRSVQAERVRQ 240
PGVGRVTQ+KLQQL+LETLGDLQ IEE VLI HFGKYGKQL+LYAQGIDHR+VQAER RQ
Sbjct 181 PGVGRVTQEKLQQLQLETLGDLQQIEENVLIHHFGKYGKQLFLYAQGIDHRTVQAERERQ 240
Query 241 QISKETTFDQDLYLHECSSYWLMLAEKVWQSLQNKNLQARGVNIKLKNKHFQVFQHSKSF 300
QISKETTFD DLYL+EC +YW LAEKVW +LQ+K L ARGV+IKLK K+FQ++QHSKSF
Sbjct 241 QISKETTFDGDLYLNECLAYWPPLAEKVWNNLQHKQLTARGVSIKLKLKNFQIYQHSKSF 300
Query 301 KRALQSLDEFKSVLALLLQEISLTLDDQYRLIGVGLYQLSPSASESQLTLW 351
KR +QS E +L +LL E+ L + QYRLIG+G+YQL+P A E+QL+LW
Sbjct 301 KRPIQSFAELLDILQVLLYEMHLPAEFQYRLIGMGVYQLAPQADENQLSLW 351
>A0A009YDF8 DNA polymerase IV [Acinetobacter sp. 479375]
Length=351
Score = 556 bits (1434), Expect = 0.0
Identities = 277/351 (79%), Positives = 312/351 (89%), Gaps = 0/351 (0%)
Query 1 MRKIIHIDMDAFYASVELRERPELKTLPVVISSHHPRAVIAAASYPARVYGLRSAMPMGQ 60
MRKIIHIDMDAFYASVELRERPELK LPVVISSHHPRAVIAAASYPAR +GLRSAM MGQ
Sbjct 1 MRKIIHIDMDAFYASVELRERPELKDLPVVISSHHPRAVIAAASYPARKFGLRSAMSMGQ 60
Query 61 ARKLCPDLIIIEPNFDKYRAVSHQIHQIFQQHTHIIEPLSLDEAYLDVTENLNNLPSATD 120
ARKLCPD+++IEPNF+KYRAVS QIH IFQQ+T +IEPLSLDEAYLDVTEN NLPSATD
Sbjct 61 ARKLCPDVVVIEPNFEKYRAVSAQIHHIFQQYTSMIEPLSLDEAYLDVTENFKNLPSATD 120
Query 121 VAIQIRQQIWEQTSLTASAGVAPNKFLAKIASDWNKPNGLCVIKPHQVMQFIQNLPLKKI 180
+AIQIRQ+I++ T LTASAGVAPNKFLAKIASDWNKP+GLCVIKP QV FIQ+LPLKKI
Sbjct 121 IAIQIRQEIFKVTGLTASAGVAPNKFLAKIASDWNKPDGLCVIKPSQVQAFIQDLPLKKI 180
Query 181 PGVGRVTQDKLQQLKLETLGDLQHIEEAVLIQHFGKYGKQLYLYAQGIDHRSVQAERVRQ 240
PGVGRVTQ+KLQQL+LETLGDLQ IEE VLI HFGKYGKQL+LYAQGIDHR+VQAER RQ
Sbjct 181 PGVGRVTQEKLQQLQLETLGDLQRIEENVLIHHFGKYGKQLFLYAQGIDHRTVQAERERQ 240
Query 241 QISKETTFDQDLYLHECSSYWLMLAEKVWQSLQNKNLQARGVNIKLKNKHFQVFQHSKSF 300
QISKETTFD DLYL+EC +YW LAEKVW +LQ+K L ARGV+IKLK K+FQ++QHSKSF
Sbjct 241 QISKETTFDGDLYLNECLAYWPPLAEKVWNNLQHKQLTARGVSIKLKLKNFQIYQHSKSF 300
Query 301 KRALQSLDEFKSVLALLLQEISLTLDDQYRLIGVGLYQLSPSASESQLTLW 351
KR +QS E +L +LL E+ L + QYRLIG+G+YQL+P A E+QL+LW
Sbjct 301 KRPIQSFAELLDILQVLLYEMHLPAEFQYRLIGLGVYQLAPQADENQLSLW 351
>A0A3A8EGE1 DNA polymerase IV [Acinetobacter guerrae]
Length=351
Score = 556 bits (1434), Expect = 0.0
Identities = 279/351 (79%), Positives = 310/351 (88%), Gaps = 0/351 (0%)
Query 1 MRKIIHIDMDAFYASVELRERPELKTLPVVISSHHPRAVIAAASYPARVYGLRSAMPMGQ 60
MRKIIHIDMDAFYASVELRERPELK LPVVISSHHPRAVIAAASYPAR +GLRSAM MGQ
Sbjct 1 MRKIIHIDMDAFYASVELRERPELKDLPVVISSHHPRAVIAAASYPARKFGLRSAMSMGQ 60
Query 61 ARKLCPDLIIIEPNFDKYRAVSHQIHQIFQQHTHIIEPLSLDEAYLDVTENLNNLPSATD 120
ARKLCPD+++IEPNF+KYRAVS QIH IFQQ+T +IEPLSLDEAYLDVTEN NLPSATD
Sbjct 61 ARKLCPDVVVIEPNFEKYRAVSAQIHHIFQQYTSMIEPLSLDEAYLDVTENFKNLPSATD 120
Query 121 VAIQIRQQIWEQTSLTASAGVAPNKFLAKIASDWNKPNGLCVIKPHQVMQFIQNLPLKKI 180
VAIQIRQ I++ T L+ASAGVAPNKFLAKIASDWNKP+GLCVIKP QV FIQNLPLKKI
Sbjct 121 VAIQIRQDIFKVTGLSASAGVAPNKFLAKIASDWNKPDGLCVIKPSQVQAFIQNLPLKKI 180
Query 181 PGVGRVTQDKLQQLKLETLGDLQHIEEAVLIQHFGKYGKQLYLYAQGIDHRSVQAERVRQ 240
PGVGRVTQ+KLQQL+LETLGDLQ I+E VLI HFGKYGKQL+LYAQGIDHR+VQAER RQ
Sbjct 181 PGVGRVTQEKLQQLQLETLGDLQQIDENVLIHHFGKYGKQLFLYAQGIDHRTVQAERERQ 240
Query 241 QISKETTFDQDLYLHECSSYWLMLAEKVWQSLQNKNLQARGVNIKLKNKHFQVFQHSKSF 300
QISKETTFD DLYL+EC +YW LAEKVW +LQ K L ARGV IKLK K+FQ++QHSKSF
Sbjct 241 QISKETTFDGDLYLNECLAYWPPLAEKVWNNLQYKQLTARGVTIKLKLKNFQIYQHSKSF 300
Query 301 KRALQSLDEFKSVLALLLQEISLTLDDQYRLIGVGLYQLSPSASESQLTLW 351
KR +QSL E VL +LL E+ L + QYRLIG+G+YQL+P A E+QL+LW
Sbjct 301 KRPIQSLAELLDVLQVLLYEMHLPTEFQYRLIGIGVYQLAPQADENQLSLW 351
>E3VXA8 DNA polymerase IV [Deinococcus ficus]
Length=358
Score = 239 bits (611), Expect = 7e-80
Identities = 143/341 (42%), Positives = 197/341 (58%), Gaps = 3/341 (1%)
Query 1 MRKIIHIDMDAFYASVELRERPELKTLPVVISSHHPRAVIAAASYPARVYGLRSAMPMGQ 60
MRKI+H+D DAF+ASVELR+ P L+ V ++ H PR+V+ A+Y AR YG+RSA+P+
Sbjct 3 MRKIVHVDADAFFASVELRDNPSLRGKAVAVAYHGPRSVVTTATYEARQYGVRSALPLRT 62
Query 61 ARKLCPDLIIIEPNFDKYRAVSHQIHQIFQQHTHIIEPLSLDEAYLDVTENLNNLPSATD 120
A CP LI+IEP D YR S IH +F + T +IEPLSLDEAYLDVT SAT
Sbjct 63 ALARCPHLIVIEPRMDAYREASRLIHGVFTEFTDLIEPLSLDEAYLDVTRPKRGPGSATR 122
Query 121 VAIQIRQQIWEQT-SLTASAGVAPNKFLAKIASDWNKPNGLCVIKPHQVMQFIQNLPLKK 179
+A +IR+ + E+T LT SAGV+ NK LAK+ S NKP+GL VI P I LP+ +
Sbjct 123 IAQEIRRLVRERTGGLTVSAGVSFNKMLAKLGSGMNKPDGLTVILPQDADALIARLPVGE 182
Query 180 IPGVGRVTQDKLQQLKLETLGDLQHIEEAVLIQHFGKYGKQLYLYAQGIDHRSVQAERVR 239
G+G VT KL++L + T DL+ L FG++G +Y A+GID R V R
Sbjct 183 FYGIGPVTAAKLERLGIRTGADLRARSLTELTAAFGRHGAHMYAIARGIDDRPVDPSDDR 242
Query 240 QQISKETTFDQDL-YLHECSSYWLMLAEKVWQSLQNKNLQARGVNIKLKNKHFQVFQHSK 298
+ + E T+D DL L + + L+E+ + L L R V +K+K +F+V +
Sbjct 243 KSVGTEDTYDTDLRTLADMHAKLPGLSERTARRLARHGLAGRVVTVKVKFSNFEVISRQQ 302
Query 299 SFKRALQSLDEFKSVLALLLQEISLTLDDQYRLIGVGLYQL 339
S +Q+ +E V LL L RL+GV + L
Sbjct 303 SLPVPVQTAEEIGRVARRLL-GADLVGTRAVRLLGVTVSHL 342
>E3VXB0 DNA polymerase IV [Deinococcus ficus]
Length=326
Score = 198 bits (504), Expect = 3e-64
Identities = 121/305 (40%), Positives = 170/305 (56%), Gaps = 3/305 (1%)
Query 34 HHPRAVIAAASYPARVYGLRSAMPMGQARKLCPDLIIIEPNFDKYRAVSHQIHQIFQQHT 93
H PR+V+ A+Y AR YG+RSA+P+ A CP LI+IEP D YR S I +F + T
Sbjct 4 HGPRSVVTTATYEARQYGVRSALPLRTALARCPHLIVIEPRMDAYREASEIIQGVFHEFT 63
Query 94 HIIEPLSLDEAYLDVTENLNNLPSATDVAIQIRQQIWEQT-SLTASAGVAPNKFLAKIAS 152
++EPLSLDEAYLD+T PSAT +A +IR+ + E+T LT SAGV+ NK LAK+ S
Sbjct 64 DLVEPLSLDEAYLDLTTPKQGPPSATLIAQEIRRLVRERTGGLTVSAGVSYNKLLAKLGS 123
Query 153 DWNKPNGLCVIKPHQVMQFIQNLPLKKIPGVGRVTQDKLQQLKLETLGDLQHIEEAVLIQ 212
NKP+GL VI PHQ + LP+ G+G VT KL++L + T DL+ A L
Sbjct 124 GMNKPDGLTVILPHQADALLARLPVDAFFGIGPVTAAKLERLGIRTGADLRARPLAELTA 183
Query 213 HFGKYGKQLYLYAQGIDHRSVQAERVRQQISKETTFDQDL-YLHECSSYWLMLAEKVWQS 271
FG +G ++ A+G+D R V R+ + E T+DQDL L E + L+E+ +
Sbjct 184 AFGSHGAHMHAIARGVDDRPVDPSDDRKSVGTEDTYDQDLRTLPEMLAKLPDLSERTSRR 243
Query 272 LQNKNLQARGVNIKLKNKHFQVFQHSKSFKRALQSLDEFKSVLALLLQEISLTLDDQYRL 331
L L R V +K+K +F+V + +E + V LL L RL
Sbjct 244 LARHGLAGRVVAVKVKFANFEVVTRQLRLPSPVHRPEEIERVARHLLTP-ELVAGRPVRL 302
Query 332 IGVGL 336
+G+ +
Sbjct 303 LGISV 307
>Q5Q9H5 DNA polymerase kappa [Mus musculus]
Length=453
Score = 193 bits (491), Expect = 6e-61
Identities = 115/319 (36%), Positives = 188/319 (59%), Gaps = 11/319 (3%)
Query 4 IIHIDMDAFYASVELRERPELKTLPVVISSHHPRAVIAAASYPARVYGLRSAMPMGQARK 63
I+H+DMDAFYA+VE+R+ PELK P+ + S +++A ++Y AR +G+R+AMP A++
Sbjct 102 IVHVDMDAFYAAVEMRDNPELKDKPIAVGS---MSMLATSNYHARRFGVRAAMPGFIAKR 158
Query 64 LCPDLIIIEPNFDKYRAVSHQIHQIFQQHTHIIEPLSLDEAYLDVTENLNNLPSATDVAI 123
LCP LII+ PNFDKYRAVS ++ +I ++ +SLDEAYL++T++L
Sbjct 159 LCPQLIIVPPNFDKYRAVSKEVKEILAEYDPNFMAMSLDEAYLNITQHLQERQDWP---- 214
Query 124 QIRQQIWEQTSLTASAGVAPNKFLAKIASDWNKPNGLCVIKPHQ--VMQFIQNLPLKKIP 181
+ +++ + + G+APN LAK+ SD NKPNG I P + VM FI++LP++K+
Sbjct 215 EDKRRYFIKMGNYLKIGIAPNTMLAKVCSDKNKPNGQYQILPSRSAVMDFIKDLPIRKVS 274
Query 182 GVGRVTQDKLQQLKLETLGDLQHIEEAVLIQHFGKYGKQLYLY-AQGIDHRSVQAERVRQ 240
G+G+VT+ L L + T +L + + A+L F + +L+ A G+ + + R+
Sbjct 275 GIGKVTEKMLMALGIVTCTEL-YQQRALLSLLFSETSWHYFLHIALGLGSTDLARDGERK 333
Query 241 QISKETTFDQDLYLHECSSYWLMLAEKVWQSLQNKNLQARGVNIKLKNKHFQVFQHSKSF 300
+S E TF + E S L ++ LQ + L+ R V IKLKN +F+V + +
Sbjct 334 SMSVERTFSEISKTEEQYSLCQELCAELAHDLQKEGLKGRTVTIKLKNVNFEVKTRASTV 393
Query 301 KRALQSLDEFKSVLALLLQ 319
A+ + +E ++ LL+
Sbjct 394 PAAISTAEEIFAIAKELLR 412
>Q5Q9H0 DNA polymerase kappa [Mus musculus]
Length=467
Score = 193 bits (491), Expect = 8e-61
Identities = 115/319 (36%), Positives = 188/319 (59%), Gaps = 11/319 (3%)
Query 4 IIHIDMDAFYASVELRERPELKTLPVVISSHHPRAVIAAASYPARVYGLRSAMPMGQARK 63
I+H+DMDAFYA+VE+R+ PELK P+ + S +++A ++Y AR +G+R+AMP A++
Sbjct 102 IVHVDMDAFYAAVEMRDNPELKDKPIAVGS---MSMLATSNYHARRFGVRAAMPGFIAKR 158
Query 64 LCPDLIIIEPNFDKYRAVSHQIHQIFQQHTHIIEPLSLDEAYLDVTENLNNLPSATDVAI 123
LCP LII+ PNFDKYRAVS ++ +I ++ +SLDEAYL++T++L
Sbjct 159 LCPQLIIVPPNFDKYRAVSKEVKEILAEYDPNFMAMSLDEAYLNITQHLQERQDWP---- 214
Query 124 QIRQQIWEQTSLTASAGVAPNKFLAKIASDWNKPNGLCVIKPHQ--VMQFIQNLPLKKIP 181
+ +++ + + G+APN LAK+ SD NKPNG I P + VM FI++LP++K+
Sbjct 215 EDKRRYFIKMGNYLKIGIAPNTMLAKVCSDKNKPNGQYQILPSRSAVMDFIKDLPIRKVS 274
Query 182 GVGRVTQDKLQQLKLETLGDLQHIEEAVLIQHFGKYGKQLYLY-AQGIDHRSVQAERVRQ 240
G+G+VT+ L L + T +L + + A+L F + +L+ A G+ + + R+
Sbjct 275 GIGKVTEKMLMALGIVTCTEL-YQQRALLSLLFSETSWHYFLHIALGLGSTDLARDGERK 333
Query 241 QISKETTFDQDLYLHECSSYWLMLAEKVWQSLQNKNLQARGVNIKLKNKHFQVFQHSKSF 300
+S E TF + E S L ++ LQ + L+ R V IKLKN +F+V + +
Sbjct 334 SMSVERTFSEISKTEEQYSLCQELCAELAHDLQKEGLKGRTVTIKLKNVNFEVKTRASTV 393
Query 301 KRALQSLDEFKSVLALLLQ 319
A+ + +E ++ LL+
Sbjct 394 PAAISTAEEIFAIAKELLR 412
>Q5Q9H6 DNA polymerase kappa [Mus musculus]
Length=772
Score = 194 bits (493), Expect = 5e-59
Identities = 123/346 (36%), Positives = 201/346 (58%), Gaps = 13/346 (4%)
Query 4 IIHIDMDAFYASVELRERPELKTLPVVISSHHPRAVIAAASYPARVYGLRSAMPMGQARK 63
I+H+DMDAFYA+VE+R+ PELK P+ + S +++A ++Y AR +G+R+AMP A++
Sbjct 102 IVHVDMDAFYAAVEMRDNPELKDKPIAVGS---MSMLATSNYHARRFGVRAAMPGFIAKR 158
Query 64 LCPDLIIIEPNFDKYRAVSHQIHQIFQQHTHIIEPLSLDEAYLDVTENLNNLPSATDVAI 123
LCP LII+ PNFDKYRAVS ++ +I ++ +SLDEAYL++T++L
Sbjct 159 LCPQLIIVPPNFDKYRAVSKEVKEILAEYDPNFMAMSLDEAYLNITQHLQERQDWP---- 214
Query 124 QIRQQIWEQTSLTASAGVAPNKFLAKIASDWNKPNGLCVIKPHQ--VMQFIQNLPLKKIP 181
+ +++ + + G+APN LAK+ SD NKPNG I P + VM FI++LP++K+
Sbjct 215 EDKRRYFIKMGNYLKIGIAPNTMLAKVCSDKNKPNGQYQILPSRSAVMDFIKDLPIRKVS 274
Query 182 GVGRVTQDKLQQLKLETLGDLQHIEEAVLIQHFGKYGKQLYLY-AQGIDHRSVQAERVRQ 240
G+G+VT+ L L + T +L + + A+L F + +L+ A G+ + + R+
Sbjct 275 GIGKVTEKMLMALGIVTCTEL-YQQRALLSLLFSETSWHYFLHIALGLGSTDLARDGERK 333
Query 241 QISKETTFDQDLYLHECSSYWLMLAEKVWQSLQNKNLQARGVNIKLKNKHFQVFQHSKSF 300
+S E TF + E S L ++ LQ + L+ R V IKLKN +F+V + +
Sbjct 334 SMSVERTFSEISKTEEQYSLCQELCAELAHDLQKEGLKGRTVTIKLKNVNFEVKTRASTV 393
Query 301 KRALQSLDE-FKSVLALLLQEISLTLDDQYRLIGVGLYQLSPSASE 345
A+ + +E F LL E+++ RL +G+ ++S +SE
Sbjct 394 PAAISTAEEIFAIAKELLRTEVNVGSPHPLRLRLMGV-RMSTFSSE 438
>Q5Q9H7 DNA polymerase kappa [Mus musculus]
Length=793
Score = 191 bits (484), Expect = 1e-57
Identities = 126/363 (35%), Positives = 203/363 (56%), Gaps = 26/363 (7%)
Query 4 IIHIDMDAFYASVELRERPELKTLPVVISSHHPRAVIAAASYPARVYGLRSAMPMGQARK 63
I+H+DMDAFYA+VE+R+ PELK P+ + S +++A ++Y AR +G+R+AMP A++
Sbjct 102 IVHVDMDAFYAAVEMRDNPELKDKPIAVGS---MSMLATSNYHARRFGVRAAMPGFIAKR 158
Query 64 LCPDLIIIEPNFDKYRAVSHQIHQIFQQHTHIIEPLSLDEAYLDVTENLN---------- 113
LCP LII+ PNFDKYRAVS ++ +I ++ +SLDEAYL++T++L
Sbjct 159 LCPQLIIVPPNFDKYRAVSKEVKEILAEYDPNFMAMSLDEAYLNITQHLQERQDWPEDKR 218
Query 114 ----NLPSATDVAIQIRQQIWEQTSLTASA---GVAPNKFLAKIASDWNKPNGLCVIKPH 166
+ + +A+ +L A G+APN LAK+ SD NKPNG I P
Sbjct 219 RYFIKMGNYLKIAMMTLDLAASNLNLLRPAKPPGIAPNTMLAKVCSDKNKPNGQYQILPS 278
Query 167 Q--VMQFIQNLPLKKIPGVGRVTQDKLQQLKLETLGDLQHIEEAVLIQHFGKYGKQLYLY 224
+ VM FI++LP++K+ G+G+VT+ L L + T +L + + A+L F + +L+
Sbjct 279 RSAVMDFIKDLPIRKVSGIGKVTEKMLMALGIVTCTEL-YQQRALLSLLFSETSWHYFLH 337
Query 225 -AQGIDHRSVQAERVRQQISKETTFDQDLYLHECSSYWLMLAEKVWQSLQNKNLQARGVN 283
A G+ + + R+ +S E TF + E S L ++ LQ + L+ R V
Sbjct 338 IALGLGSTDLARDGERKSMSVERTFSEISKTEEQYSLCQELCAELAHDLQKEGLKGRTVT 397
Query 284 IKLKNKHFQVFQHSKSFKRALQSLDE-FKSVLALLLQEISLTLDDQYRLIGVGLYQLSPS 342
IKLKN +F+V + + A+ + +E F LL E+++ RL +G+ ++S
Sbjct 398 IKLKNVNFEVKTRASTVPAAISTAEEIFAIAKELLRTEVNVGSPHPLRLRLMGV-RMSTF 456
Query 343 ASE 345
+SE
Sbjct 457 SSE 459
>Q5Q9H2 DNA polymerase kappa [Mus musculus]
Length=495
Score = 116 bits (290), Expect = 5e-32
Identities = 54/109 (50%), Positives = 82/109 (75%), Gaps = 3/109 (3%)
Query 4 IIHIDMDAFYASVELRERPELKTLPVVISSHHPRAVIAAASYPARVYGLRSAMPMGQARK 63
I+H+DMDAFYA+VE+R+ PELK P+ + S +++A ++Y AR +G+R+AMP A++
Sbjct 102 IVHVDMDAFYAAVEMRDNPELKDKPIAVGS---MSMLATSNYHARRFGVRAAMPGFIAKR 158
Query 64 LCPDLIIIEPNFDKYRAVSHQIHQIFQQHTHIIEPLSLDEAYLDVTENL 112
LCP LII+ PNFDKYRAVS ++ +I ++ +SLDEAYL++T++L
Sbjct 159 LCPQLIIVPPNFDKYRAVSKEVKEILAEYDPNFMAMSLDEAYLNITQHL 207
Score = 112 bits (280), Expect = 1e-30
Identities = 73/206 (35%), Positives = 118/206 (57%), Gaps = 4/206 (2%)
Query 117 SATDVAIQIRQQIWEQTSLTASAGVAPNKFLAKIASDWNKPNGLCVIKPHQ--VMQFIQN 174
SA +V +IR +I ++T+LTASAG+APN LAK+ SD NKPNG I P + VM FI++
Sbjct 288 SAEEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPSRSAVMDFIKD 347
Query 175 LPLKKIPGVGRVTQDKLQQLKLETLGDLQHIEEAVLIQHFGKYGKQLYLY-AQGIDHRSV 233
LP++K+ G+G+VT+ L L + T +L + + A+L F + +L+ A G+ +
Sbjct 348 LPIRKVSGIGKVTEKMLMALGIVTCTEL-YQQRALLSLLFSETSWHYFLHIALGLGSTDL 406
Query 234 QAERVRQQISKETTFDQDLYLHECSSYWLMLAEKVWQSLQNKNLQARGVNIKLKNKHFQV 293
+ R+ +S E TF + E S L ++ LQ + L+ R V IKLKN +F+V
Sbjct 407 ARDGERKSMSVERTFSEISKTEEQYSLCQELCAELAHDLQKEGLKGRTVTIKLKNVNFEV 466
Query 294 FQHSKSFKRALQSLDEFKSVLALLLQ 319
+ + A+ + +E ++ LL+
Sbjct 467 KTRASTVPAAISTAEEIFAIAKELLR 492
>Q5Q9H8 DNA polymerase kappa [Mus musculus]
Length=533
Score = 116 bits (290), Expect = 7e-32
Identities = 54/109 (50%), Positives = 82/109 (75%), Gaps = 3/109 (3%)
Query 4 IIHIDMDAFYASVELRERPELKTLPVVISSHHPRAVIAAASYPARVYGLRSAMPMGQARK 63
I+H+DMDAFYA+VE+R+ PELK P+ + S +++A ++Y AR +G+R+AMP A++
Sbjct 102 IVHVDMDAFYAAVEMRDNPELKDKPIAVGS---MSMLATSNYHARRFGVRAAMPGFIAKR 158
Query 64 LCPDLIIIEPNFDKYRAVSHQIHQIFQQHTHIIEPLSLDEAYLDVTENL 112
LCP LII+ PNFDKYRAVS ++ +I ++ +SLDEAYL++T++L
Sbjct 159 LCPQLIIVPPNFDKYRAVSKEVKEILAEYDPNFMAMSLDEAYLNITQHL 207
Score = 112 bits (280), Expect = 2e-30
Identities = 73/206 (35%), Positives = 118/206 (57%), Gaps = 4/206 (2%)
Query 117 SATDVAIQIRQQIWEQTSLTASAGVAPNKFLAKIASDWNKPNGLCVIKPHQ--VMQFIQN 174
SA +V +IR +I ++T+LTASAG+APN LAK+ SD NKPNG I P + VM FI++
Sbjct 288 SAEEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPSRSAVMDFIKD 347
Query 175 LPLKKIPGVGRVTQDKLQQLKLETLGDLQHIEEAVLIQHFGKYGKQLYLY-AQGIDHRSV 233
LP++K+ G+G+VT+ L L + T +L + + A+L F + +L+ A G+ +
Sbjct 348 LPIRKVSGIGKVTEKMLMALGIVTCTEL-YQQRALLSLLFSETSWHYFLHIALGLGSTDL 406
Query 234 QAERVRQQISKETTFDQDLYLHECSSYWLMLAEKVWQSLQNKNLQARGVNIKLKNKHFQV 293
+ R+ +S E TF + E S L ++ LQ + L+ R V IKLKN +F+V
Sbjct 407 ARDGERKSMSVERTFSEISKTEEQYSLCQELCAELAHDLQKEGLKGRTVTIKLKNVNFEV 466
Query 294 FQHSKSFKRALQSLDEFKSVLALLLQ 319
+ + A+ + +E ++ LL+
Sbjct 467 KTRASTVPAAISTAEEIFAIAKELLR 492
>Q8AWW1 DNA polymerase kappa [Gallus gallus]
Length=867
Score = 116 bits (291), Expect = 1e-31
Identities = 71/205 (35%), Positives = 121/205 (59%), Gaps = 4/205 (2%)
Query 117 SATDVAIQIRQQIWEQTSLTASAGVAPNKFLAKIASDWNKPNGLCVIKPHQ--VMQFIQN 174
SA + +IR +I ++T LTASAG+APN LAK+ SD NKPNG C I P + V+ FI++
Sbjct 282 SAEEAVKEIRFRIEQKTQLTASAGIAPNTMLAKMCSDRNKPNGQCRISPERQAVLDFIKD 341
Query 175 LPLKKIPGVGRVTQDKLQQLKLETLGDLQHIEEAVLIQHFGKYGKQLYL-YAQGIDHRSV 233
LP++K+PG+G+VT+ L+ L + T +L + + A+L F + + +L + G+ +
Sbjct 342 LPIRKVPGIGKVTEKMLKALGIVTCSEL-YQQRALLSLLFSEASWRSFLDISLGLGSTHL 400
Query 234 QAERVRQQISKETTFDQDLYLHECSSYWLMLAEKVWQSLQNKNLQARGVNIKLKNKHFQV 293
+ + R+ +S E TF + + S L ++ Q LQ + L+ + V +KLKN +F+V
Sbjct 401 EKDGERKSMSTERTFSEISKAEDQYSLCQELCRELAQDLQKEGLKGKTVTLKLKNVNFEV 460
Query 294 FQHSKSFKRALQSLDEFKSVLALLL 318
+ + ++ + DE +V +LL
Sbjct 461 KTRASTVLSSVSTEDEIFAVAKMLL 485
Score = 110 bits (274), Expect = 2e-29
Identities = 53/109 (49%), Positives = 79/109 (72%), Gaps = 3/109 (3%)
Query 4 IIHIDMDAFYASVELRERPELKTLPVVISSHHPRAVIAAASYPARVYGLRSAMPMGQARK 63
I+HIDMDAFYA+VE+R+ PELK P+ + S ++++ ++Y AR +G+R+AMP A+K
Sbjct 104 IVHIDMDAFYAAVEMRDNPELKEKPIAVGS---MSMLSTSNYHARRFGVRAAMPGFIAKK 160
Query 64 LCPDLIIIEPNFDKYRAVSHQIHQIFQQHTHIIEPLSLDEAYLDVTENL 112
LCP L I+ NF+KYR VS ++ +I ++ P+ LDEAYL+VTE+L
Sbjct 161 LCPHLTIVPLNFEKYRKVSKEVKEILAEYDPHFMPMGLDEAYLNVTEHL 209
>Q5Q9H1 DNA polymerase kappa [Mus musculus]
Length=547
Score = 113 bits (282), Expect = 9e-31
Identities = 53/109 (49%), Positives = 81/109 (74%), Gaps = 3/109 (3%)
Query 4 IIHIDMDAFYASVELRERPELKTLPVVISSHHPRAVIAAASYPARVYGLRSAMPMGQARK 63
I+H+DMDAFYA+VE+R+ PELK P+ + S +++A ++Y AR +G+R+AMP A++
Sbjct 102 IVHVDMDAFYAAVEMRDNPELKDKPIAVGS---MSMLATSNYHARRFGVRAAMPGFIAKR 158
Query 64 LCPDLIIIEPNFDKYRAVSHQIHQIFQQHTHIIEPLSLDEAYLDVTENL 112
LCP LII+ PNFDKYRAVS ++ +I ++ +SLDEA L++T++L
Sbjct 159 LCPQLIIVPPNFDKYRAVSKEVKEILAEYDPNFMAMSLDEAXLNITQHL 207
Score = 112 bits (280), Expect = 2e-30
Identities = 73/206 (35%), Positives = 118/206 (57%), Gaps = 4/206 (2%)
Query 117 SATDVAIQIRQQIWEQTSLTASAGVAPNKFLAKIASDWNKPNGLCVIKPHQ--VMQFIQN 174
SA +V +IR +I ++T+LTASAG+APN LAK+ SD NKPNG I P + VM FI++
Sbjct 288 SAEEVVKEIRFRIEQKTTLTASAGIAPNTMLAKVCSDKNKPNGQYQILPSRSAVMDFIKD 347
Query 175 LPLKKIPGVGRVTQDKLQQLKLETLGDLQHIEEAVLIQHFGKYGKQLYLY-AQGIDHRSV 233
LP++K+ G+G+VT+ L L + T +L + + A+L F + +L+ A G+ +
Sbjct 348 LPIRKVSGIGKVTEKMLMALGIVTCTEL-YQQRALLSLLFSETSWHYFLHIALGLGSTDL 406
Query 234 QAERVRQQISKETTFDQDLYLHECSSYWLMLAEKVWQSLQNKNLQARGVNIKLKNKHFQV 293
+ R+ +S E TF + E S L ++ LQ + L+ R V IKLKN +F+V
Sbjct 407 ARDGERKSMSVERTFSEISKTEEQYSLCQELCAELAHDLQKEGLKGRTVTIKLKNVNFEV 466
Query 294 FQHSKSFKRALQSLDEFKSVLALLLQ 319
+ + A+ + +E ++ LL+
Sbjct 467 KTRASTVPAAISTAEEIFAIAKELLR 492
Lambda K H a alpha
0.322 0.135 0.397 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 2348703
Database: eb3699cc655649390cd4942b55c640a3.TrEMBL.fasta
Posted date: May 12, 2024 12:09 PM
Number of letters in database: 8,772
Number of sequences in database: 19
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
