BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 86737f952b1392d6971d71e2fece1bbb.SwissProt.fasta
16 sequences; 12,056 total letters
Query= ACIAD0243
Length=98
Score E
Sequences producing significant alignments: (Bits) Value
Q3ZD69 Prelamin-A/C [Sus scrofa] 38.1 3e-07
P02545 Prelamin-A/C [Homo sapiens] 38.1 3e-07
P48679 Prelamin-A/C [Rattus norvegicus] 38.1 3e-07
P48678 Prelamin-A/C [Mus musculus] 38.1 3e-07
Q46868 Ubiquinone biosynthesis accessory factor UbiK [Escherichia... 36.2 4e-07
Q8ZLY9 Ubiquinone biosynthesis accessory factor UbiK [Salmonella ... 35.8 8e-07
Q3UP38 EF-hand calcium-binding domain-containing protein 4B [Mus ... 35.8 2e-06
Q6P132 Tax1-binding protein 1 homolog B [Danio rerio] 35.0 3e-06
Q6AYX5 Outer dense fiber protein 2 [Rattus norvegicus] 35.0 3e-06
A3KGV1 Outer dense fiber protein 2 [Mus musculus] 34.3 6e-06
F4JJP1 WEB family protein At4g27595, chloroplastic [Arabidopsis t... 33.9 8e-06
Q6VGS5 Protein Daple [Mus musculus] 33.1 2e-05
Q8CP38 Exodeoxyribonuclease 7 large subunit [Staphylococcus epide... 32.7 2e-05
Q5HP29 Exodeoxyribonuclease 7 large subunit [Staphylococcus epide... 32.7 2e-05
P42566 Epidermal growth factor receptor substrate 15 [Homo sapiens] 32.3 3e-05
P33176 Kinesin-1 heavy chain [Homo sapiens] 32.3 3e-05
>Q3ZD69 Prelamin-A/C [Sus scrofa]
Length=664
Score = 38.1 bits (87), Expect = 3e-07
Identities = 22/65 (34%), Positives = 38/65 (58%), Gaps = 1/65 (2%)
Query 33 EQVDQPKKDLEKNLRALLNEAVEKLDLVSKQEIERQHHALHQANLRLKSLQEQVTLLEQQ 92
+QV+Q KK+LEK A L+ A + + S + H L Q+ +R+ SL Q++ L++Q
Sbjct 254 DQVEQYKKELEKTYSAKLDNARQSAERNSNL-VGAAHEELQQSRIRIDSLSAQLSQLQKQ 312
Query 93 IHNKK 97
+ K+
Sbjct 313 LAAKE 317
>P02545 Prelamin-A/C [Homo sapiens]
Length=664
Score = 38.1 bits (87), Expect = 3e-07
Identities = 22/65 (34%), Positives = 38/65 (58%), Gaps = 1/65 (2%)
Query 33 EQVDQPKKDLEKNLRALLNEAVEKLDLVSKQEIERQHHALHQANLRLKSLQEQVTLLEQQ 92
+QV+Q KK+LEK A L+ A + + S + H L Q+ +R+ SL Q++ L++Q
Sbjct 254 DQVEQYKKELEKTYSAKLDNARQSAERNSNL-VGAAHEELQQSRIRIDSLSAQLSQLQKQ 312
Query 93 IHNKK 97
+ K+
Sbjct 313 LAAKE 317
>P48679 Prelamin-A/C [Rattus norvegicus]
Length=665
Score = 38.1 bits (87), Expect = 3e-07
Identities = 22/65 (34%), Positives = 38/65 (58%), Gaps = 1/65 (2%)
Query 33 EQVDQPKKDLEKNLRALLNEAVEKLDLVSKQEIERQHHALHQANLRLKSLQEQVTLLEQQ 92
+QV+Q KK+LEK A L+ A + + S + H L Q+ +R+ SL Q++ L++Q
Sbjct 254 DQVEQYKKELEKTYSAKLDNARQSAERNSNL-VGAAHEELQQSRIRIDSLSAQLSQLQKQ 312
Query 93 IHNKK 97
+ K+
Sbjct 313 LAAKE 317
>P48678 Prelamin-A/C [Mus musculus]
Length=665
Score = 38.1 bits (87), Expect = 3e-07
Identities = 22/65 (34%), Positives = 38/65 (58%), Gaps = 1/65 (2%)
Query 33 EQVDQPKKDLEKNLRALLNEAVEKLDLVSKQEIERQHHALHQANLRLKSLQEQVTLLEQQ 92
+QV+Q KK+LEK A L+ A + + S + H L Q+ +R+ SL Q++ L++Q
Sbjct 254 DQVEQYKKELEKTYSAKLDNARQSAERNSNL-VGAAHEELQQSRIRIDSLSAQLSQLQKQ 312
Query 93 IHNKK 97
+ K+
Sbjct 313 LAAKE 317
>Q46868 Ubiquinone biosynthesis accessory factor UbiK [Escherichia
coli (strain K12)]
Length=96
Score = 36.2 bits (82), Expect = 4e-07
Identities = 17/53 (32%), Positives = 33/53 (62%), Gaps = 0/53 (0%)
Query 40 KDLEKNLRALLNEAVEKLDLVSKQEIERQHHALHQANLRLKSLQEQVTLLEQQ 92
+D+EK +R L + +LDLVS++E + Q L + +L L+++++ LE +
Sbjct 27 EDVEKKIRQTLQAQLTRLDLVSREEFDVQTQVLLRTREKLALLEQRISELENR 79
>Q8ZLY9 Ubiquinone biosynthesis accessory factor UbiK [Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)]
Length=119
Score = 35.8 bits (81), Expect = 8e-07
Identities = 17/51 (33%), Positives = 32/51 (63%), Gaps = 0/51 (0%)
Query 40 KDLEKNLRALLNEAVEKLDLVSKQEIERQHHALHQANLRLKSLQEQVTLLE 90
+D+EK +R L + +LDLVS++E + Q L + +L L+++++ LE
Sbjct 47 EDIEKKIRQTLQSQLTRLDLVSREEFDVQTQVLLRTREKLALLEQRLSELE 97
>Q3UP38 EF-hand calcium-binding domain-containing protein 4B [Mus
musculus]
Length=726
Score = 35.8 bits (81), Expect = 2e-06
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 9/70 (13%)
Query 32 LEQVDQPKKDLEKNLRALLNEAVE------KLDLVSKQ---EIERQHHALHQANLRLKSL 82
LE+++Q ++ LE AL N+ E KL L +++ E+ER H L +A +L+SL
Sbjct 271 LERLNQKQRKLEGQCAALHNDKHETKAENSKLRLTNQELARELERTSHQLQEAQQQLESL 330
Query 83 QEQVTLLEQQ 92
Q + L+Q+
Sbjct 331 QREACELQQE 340
Score = 18.9 bits (37), Expect = 1.3
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 5/73 (7%)
Query 25 ETLLHAILEQVDQPKKDLEKNLRALLNEAVEKLDLVSKQEIERQHHALHQANLRLKSLQE 84
E + H E Q K + E+ L + E+ S+ E+E++ A Q RL Q
Sbjct 225 EEIQHLYEEMEQQIKSEREQ----FLLKDTERFQARSR-ELEKKLSAKEQELERLNQKQR 279
Query 85 QVTLLEQQIHNKK 97
++ +HN K
Sbjct 280 KLEGQCAALHNDK 292
Score = 17.7 bits (34), Expect = 3.3
Identities = 6/11 (55%), Positives = 9/11 (82%), Gaps = 0/11 (0%)
Query 30 AILEQVDQPKK 40
A +EQ+D P+K
Sbjct 24 ACVEQLDHPEK 34
Score = 16.5 bits (31), Expect = 8.0
Identities = 7/13 (54%), Positives = 9/13 (69%), Gaps = 0/13 (0%)
Query 54 VEKLDLVSKQEIE 66
VE+LD K E+E
Sbjct 26 VEQLDHPEKLEVE 38
>Q6P132 Tax1-binding protein 1 homolog B [Danio rerio]
Length=823
Score = 35.0 bits (79), Expect = 3e-06
Identities = 20/81 (25%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query 17 NLLVFIMLETLLHAILEQVDQPKKDLEKNLRALLNEAVEKLDLVSKQEIERQHHALHQAN 76
++LV + L +EQ+ Q KK+L +NL L E E +D K +E+++ +++
Sbjct 145 DILVVTTKASYLEQKMEQIQQEKKELLENLDLLQKERDELID--EKNRLEKEYEQERESS 202
Query 77 LRLKSLQEQVTLLEQQIHNKK 97
+L+ +++ L Q + ++
Sbjct 203 AQLRKDVQELQLSAQSLQEER 223
Score = 23.1 bits (48), Expect = 0.046
Identities = 14/69 (20%), Positives = 34/69 (49%), Gaps = 6/69 (9%)
Query 23 MLETLLHAILEQVDQP--KKDLEKNLRALLNEAVEKLDLV----SKQEIERQHHALHQAN 76
+L+ ++H L+ + K D + + +LNE E+ ++ +K E++ + +
Sbjct 521 VLDAIIHGRLKSSSKELDKNDKYRKCKQMLNEERERCSMITDELTKMEVKLREQMKTNES 580
Query 77 LRLKSLQEQ 85
LR++ E+
Sbjct 581 LRMQLAAEE 589
Score = 21.9 bits (45), Expect = 0.12
Identities = 18/74 (24%), Positives = 40/74 (54%), Gaps = 2/74 (3%)
Query 24 LETLLHAILEQVDQPKKDLEKNLRALLNEAVEKLDLVSKQEIERQHHALHQANLRLKSLQ 83
L+ ++ E+ ++ K+ +E++ LL + E L V+++ ++++ L R+K L
Sbjct 212 LQLSAQSLQEEREEVKRRMEESTARLL-QLEEDLIGVTQKGLQKETE-LDCLKDRVKKLN 269
Query 84 EQVTLLEQQIHNKK 97
+ LE Q+ N+K
Sbjct 270 LEKEALEGQLKNEK 283
Score = 21.9 bits (45), Expect = 0.12
Identities = 19/69 (28%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query 26 TLLHAILEQVDQPKKDLEKNLRALLNEAVE-KLDLVSKQEIERQHHALHQANLRLKSLQE 84
T L A L+ + + E + L +E K L K++ RQ A + K+L+E
Sbjct 301 TKLSAELQMLKSVDVNKENTIAQLKDELARVKSCLAEKEKQHRQLLANSSPSGESKALRE 360
Query 85 QVTLLEQQI 93
Q+ E+Q+
Sbjct 361 QLRQKEEQL 369
Score = 17.3 bits (33), Expect = 4.4
Identities = 13/63 (21%), Positives = 28/63 (44%), Gaps = 3/63 (5%)
Query 35 VDQPKKDLEKNLRALLNEAVEKLDLVSKQEIERQHHALHQANLRLKSLQEQVTLLEQQIH 94
+ Q K +L + L + + L++ + AL + +L+ +EQ+ +QQ +
Sbjct 321 IAQLKDELARVKSCLAEKEKQHRQLLANSSPSGESKALRE---QLRQKEEQLQATQQQAN 377
Query 95 NKK 97
K
Sbjct 378 MLK 380
>Q6AYX5 Outer dense fiber protein 2 [Rattus norvegicus]
Length=825
Score = 35.0 bits (79), Expect = 3e-06
Identities = 20/63 (32%), Positives = 35/63 (56%), Gaps = 5/63 (8%)
Query 33 EQVDQPKKDLEKNLRALLNEAVEKLDLVSKQEIERQHHALHQANLRLKSLQEQVTLLEQQ 92
+Q+ Q +LE+ L A + VE L +++K+E A+HQA LRL+ + L +Q
Sbjct 655 KQLSQKVDELERKLEATSTQNVEFLQVIAKRE-----EAIHQAQLRLEEKTRECGSLARQ 709
Query 93 IHN 95
+ +
Sbjct 710 LES 712
Score = 17.3 bits (33), Expect = 4.4
Identities = 14/59 (24%), Positives = 27/59 (46%), Gaps = 2/59 (3%)
Query 35 VDQPKKDLEKNLRALLNEAVEKLDLVSKQEIERQHHALHQANLRLKSLQEQVTLLEQQI 93
+++ K++LE+ L E + V + IER L+ K LQ++ L ++
Sbjct 150 LEERKEELEEVAHELAE--TEHENTVLRHNIERIKEEKDFTMLQKKHLQQEKECLMSKL 206
>A3KGV1 Outer dense fiber protein 2 [Mus musculus]
Length=830
Score = 34.3 bits (77), Expect = 6e-06
Identities = 20/63 (32%), Positives = 35/63 (56%), Gaps = 5/63 (8%)
Query 33 EQVDQPKKDLEKNLRALLNEAVEKLDLVSKQEIERQHHALHQANLRLKSLQEQVTLLEQQ 92
+Q+ Q +LE+ L A + VE L +++K+E A+HQA LRL+ + L +Q
Sbjct 660 KQLSQKVDELERKLEATSAQNVEFLQVIAKRE-----EAIHQAQLRLEEKTRECGSLARQ 714
Query 93 IHN 95
+ +
Sbjct 715 LES 717
Score = 17.3 bits (33), Expect = 4.4
Identities = 14/59 (24%), Positives = 27/59 (46%), Gaps = 2/59 (3%)
Query 35 VDQPKKDLEKNLRALLNEAVEKLDLVSKQEIERQHHALHQANLRLKSLQEQVTLLEQQI 93
+++ K++LE+ L E + V + IER L+ K LQ++ L ++
Sbjct 155 LEERKEELEEVAHELAE--TEHENTVLRHNIERIKEEKDFTMLQKKHLQQEKECLMSKL 211
>F4JJP1 WEB family protein At4g27595, chloroplastic [Arabidopsis
thaliana]
Length=1221
Score = 33.9 bits (76), Expect = 8e-06
Identities = 21/54 (39%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query 39 KKDLEKNL---RALLNEAVEKLDLVSKQEIERQHHALHQANLRLKSLQEQVTLL 89
K +++K + + L A E LDL KQ +E +HALH+A L +L+E+V L
Sbjct 325 KNEVDKQVEESKELKTSASESLDLAMKQ-LEENNHALHEAELGNATLKEKVESL 377
Score = 24.3 bits (51), Expect = 0.019
Identities = 17/45 (38%), Positives = 23/45 (51%), Gaps = 10/45 (22%)
Query 33 EQVDQPKKDLEKNL------RALLNEAVEKLDLVSKQEIERQHHA 71
EQ+++ KKD K L L EA EKL ++ + QHHA
Sbjct 111 EQIERLKKDKAKALDDLKESEKLTKEANEKL----REALAAQHHA 151
Score = 23.1 bits (48), Expect = 0.047
Identities = 20/67 (30%), Positives = 33/67 (49%), Gaps = 8/67 (12%)
Query 35 VDQPKKDLE----KNLRALLNE--AVEKLD--LVSKQEIERQHHALHQANLRLKSLQEQV 86
V+ K DLE + +RALLNE A ++ L K E+ + + ++K E +
Sbjct 409 VESIKSDLETTQGEKVRALLNEKTATSQIQNLLSEKTELATELENCKKEEEKIKKAMESL 468
Query 87 TLLEQQI 93
TL Q++
Sbjct 469 TLDLQEV 475
Score = 21.6 bits (44), Expect = 0.16
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Query 52 EAVEKLDLVSKQEIE--RQHHALHQANLRLKSLQEQVTLLEQQI 93
EAV K ++ K+E+E R HAL + L S E++ ++Q++
Sbjct 171 EAVHKKEVSWKKEVESIRSQHALDIS--ALLSTTEELHRIKQEL 212
Score = 18.5 bits (36), Expect = 1.8
Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 9/64 (14%)
Query 32 LEQVDQPKKDLEKNLRALLNEAVEKLDLVSKQEIERQHHALHQANLRLKSLQEQVTLLEQ 91
L +VD+ D E L++ E +E+ + A + L LQE + E
Sbjct 810 LSKVDEIFADREAKLQSSTQE---------NEELREREVAYLKKIEELAKLQENLLDKEN 860
Query 92 QIHN 95
++H+
Sbjct 861 ELHD 864
>Q6VGS5 Protein Daple [Mus musculus]
Length=2009
Score = 33.1 bits (74), Expect = 2e-05
Identities = 21/59 (36%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query 40 KDLEKNLRALLNEAV----EKLDLVSKQEIERQHHALHQANLRLKSLQEQVTLLEQQIH 94
KDLE+ + L++AV E+ + S +++E+++ ALHQA S Q+ L +QQ+H
Sbjct 557 KDLEQE-KGHLHQAVWSLRERPQVNSTKDVEKENRALHQAVTEAGSKLSQLELEKQQLH 614
Score = 32.0 bits (71), Expect = 4e-05
Identities = 20/55 (36%), Positives = 29/55 (53%), Gaps = 2/55 (4%)
Query 40 KDLEKNLRALLNEAVEKLDLVSKQEIERQHHALHQANLRLKSLQEQVTLLEQQIH 94
KD+EK RAL E +S+ E+E+Q LH+ K EQ LE+++H
Sbjct 583 KDVEKENRALHQAVTEAGSKLSQLELEKQQ--LHRDLEEAKEKGEQAEALEKELH 635
Score = 20.8 bits (42), Expect = 0.30
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query 28 LHAILE----QVDQPKKDLEKNLRALLNEAVEKLDLVSKQEIERQHHALHQA---NLRLK 80
LH LE ++ + DL++ L E +EK+ ++ +ER+ A N RL+
Sbjct 1189 LHRNLELEHKELGERHGDLQQRKAEL--EELEKVLSTEREALEREQKTNAIATSENQRLR 1246
Query 81 SLQEQVTLLEQQI 93
++++ L QQ+
Sbjct 1247 GELDRISFLHQQL 1259
Score = 20.4 bits (41), Expect = 0.41
Identities = 11/39 (28%), Positives = 21/39 (54%), Gaps = 0/39 (0%)
Query 43 EKNLRALLNEAVEKLDLVSKQEIERQHHALHQANLRLKS 81
E N+ + +A+ + L + + + H L + NL+LKS
Sbjct 354 EDNIILIETKAMLEEQLTASRARSDKVHELEKENLQLKS 392
Score = 20.0 bits (40), Expect = 0.55
Identities = 22/72 (31%), Positives = 32/72 (44%), Gaps = 5/72 (7%)
Query 27 LLHAILEQVDQPKKDLEKNLRALLNEAVEKLDLVSK-QEIERQHHAL-HQANLRLKSLQE 84
L AIL+ EK RAL E D+ SK +E+E+ + L Q + ++L
Sbjct 847 LKDAILDDSAAKLSAAEKESRALDKELARCRDVGSKLKELEKDNRDLTKQVTMHTRTL-- 904
Query 85 QVTLLEQQIHNK 96
TL E + K
Sbjct 905 -TTLREDLVLEK 915
Score = 17.3 bits (33), Expect = 4.5
Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Query 24 LETLLHAILEQVD----QPKKDLEKNLRALLNEAVEKLDLVSKQEIERQH 69
LE H +L Q+ Q + LE+N+ + E+ + K R+H
Sbjct 1322 LEEENHHLLSQIQLLSQQNQMLLEQNMESKEQYHEEQKQYIDKLNALRRH 1371
>Q8CP38 Exodeoxyribonuclease 7 large subunit [Staphylococcus epidermidis
(strain ATCC 12228 / FDA PCI 1200)]
Length=445
Score = 32.7 bits (73), Expect = 2e-05
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 9/64 (14%)
Query 31 ILEQVDQPKKDLEKNLRALLNEAVEKLDLVSKQEIERQHHALHQANLRLKSLQEQVTLLE 90
+ +Q Q + +LE+ L LLN VEK + H L Q + K+L +Q+T +
Sbjct 307 LYDQQIQKRDELERQLNHLLNTKVEK---------SKHHLKLLQQSFNFKNLNQQITQEK 357
Query 91 QQIH 94
Q I+
Sbjct 358 QSIY 361
>Q5HP29 Exodeoxyribonuclease 7 large subunit [Staphylococcus epidermidis
(strain ATCC 35984 / RP62A)]
Length=445
Score = 32.7 bits (73), Expect = 2e-05
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 9/64 (14%)
Query 31 ILEQVDQPKKDLEKNLRALLNEAVEKLDLVSKQEIERQHHALHQANLRLKSLQEQVTLLE 90
+ +Q Q + +LE+ L LLN VEK + H L Q + K+L +Q+T +
Sbjct 307 LYDQQIQKRDELERQLNHLLNTKVEK---------SKHHLKLLQQSFNFKNLNQQITQEK 357
Query 91 QQIH 94
Q I+
Sbjct 358 QSIY 361
>P42566 Epidermal growth factor receptor substrate 15 [Homo sapiens]
Length=896
Score = 32.3 bits (72), Expect = 3e-05
Identities = 18/76 (24%), Positives = 37/76 (49%), Gaps = 9/76 (12%)
Query 31 ILEQVDQPKKDLEKNLRALLNEAVEKLDLVS---------KQEIERQHHALHQANLRLKS 81
+L+++D+ K LE+ L+ + + E+ L+S + +I L +A L
Sbjct 397 LLDELDEQKAQLEEQLKEVRKKCAEEAQLISSLKAELTSQESQISTYEEELAKAREELSR 456
Query 82 LQEQVTLLEQQIHNKK 97
LQ++ LE+ + + K
Sbjct 457 LQQETAELEESVESGK 472
>P33176 Kinesin-1 heavy chain [Homo sapiens]
Length=963
Score = 32.3 bits (72), Expect = 3e-05
Identities = 19/66 (29%), Positives = 33/66 (50%), Gaps = 0/66 (0%)
Query 32 LEQVDQPKKDLEKNLRALLNEAVEKLDLVSKQEIERQHHALHQANLRLKSLQEQVTLLEQ 91
L+ V+Q K+ LE+++ AL E V+ E+E++H Q +K EQ +
Sbjct 650 LQNVEQKKRQLEESVDALSEELVQLRAQEKVHEMEKEHLNKVQTANEVKQAVEQQIQSHR 709
Query 92 QIHNKK 97
+ H K+
Sbjct 710 ETHQKQ 715
Score = 21.9 bits (45), Expect = 0.12
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 10/79 (13%)
Query 24 LETLLHAILEQVDQPKKDLEKNLRALLNEAVEKLDLVSKQEIERQHHAL-------HQAN 76
+E I + DQ +K + + R + EKL + QE R+ H L QA
Sbjct 723 VEAKAKLITDLQDQNQKMMLEQERLRVEH--EKLK-ATDQEKSRKLHELTVMQDRREQAR 779
Query 77 LRLKSLQEQVTLLEQQIHN 95
LK L+E V Q +HN
Sbjct 780 QDLKGLEETVAKELQTLHN 798
Score = 19.6 bits (39), Expect = 0.73
Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query 44 KNLRALLNEAVEKLDLVSKQEIERQHHALHQANLRLKSLQEQVTLLEQQ 92
K L + E+ +K++ +++E+ + Q ++KSL E + +EQ+
Sbjct 609 KQLESTQTESNKKME-ENEKELAACQLRISQHEAKIKSLTEYLQNVEQK 656
Score = 19.6 bits (39), Expect = 0.73
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 8/55 (15%)
Query 42 LEKNLRALLNEAVEKLDLVSKQEIERQHHALHQANLRLKSLQEQVTLLEQQIHNK 96
LEK LRA E V+ L+ K+ A A+ K Q++V +++ + +K
Sbjct 863 LEKRLRATA-ERVKALESALKE-------AKENASRDRKRYQQEVDRIKEAVRSK 909
Lambda K H a alpha
0.325 0.139 0.363 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 637504
Database: 86737f952b1392d6971d71e2fece1bbb.SwissProt.fasta
Posted date: May 20, 2024 7:25 PM
Number of letters in database: 12,056
Number of sequences in database: 16
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
