Comparative Genomics

ACIAD0244 / TrEMBL Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: f4eb383efa1c2f1a46d37dafbd26af31.TrEMBL.fasta
           19 sequences; 2,115 total letters



Query= ACIAD0244

Length=113
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

A0A1P8ELQ1 P-II family nitrogen regulator [Acinetobacter soli]        216     3e-78
A0A6H2CCY7 P-II family nitrogen regulator [Acinetobacter sp. NEB149]  216     3e-78
A0A653KS20 Regulatory protein, P-II 2, for nitrogen assimilation ...  216     3e-78
A0A1T1JFA7 Transcriptional regulator [Acinetobacter sp. MF4640]       216     3e-78
A0A2K8UN03 Nitrogen regulatory protein P-II 2 [Acinetobacter lwof...  216     3e-78
A0A4R0D6W3 P-II family nitrogen regulator [Acinetobacter sp. ANC ...  214     8e-78
N9B5G3 Nitrogen regulatory protein P-II [Acinetobacter towneri DS...  214     8e-78
A0A1Y3DJT0 Transcriptional regulator [Acinetobacter sp. ANC 4973]     214     8e-78
A0A241VQJ0 Transcriptional regulator [Acinetobacter sp. ANC 4558]     214     8e-78
O54449 PII-protein [Azotobacter vinelandii]                           193     2e-69
Q7BBU1 GlnK [Stutzerimonas stutzeri]                                  192     6e-69
Q9EZQ3 PII-like signal transmitter protein GlnK [Azoarcus sp. (st...  186     2e-66
P94852 Nitrogen regulatory P-II protein [Herbaspirillum seropedicae]  176     1e-62
P94125 Nitrogen regulatory protein P-II [Azorhizobium caulinodans]    175     4e-62
Q9EZQ2 PII-like signal transmitter protein GlnB [Azoarcus sp. (st...  172     7e-61
Q7X4H0 Nitrogen regulatory protein P-II 2 [Pseudomonas putida]        171     1e-60
Q9EZQ4 PII-like signal transmitter protein GlnY [Azoarcus sp. (st...  170     4e-60
O31188 Nitrogen regulatory protein P-II [Cereibacter sphaeroides]     170     4e-60
D9IPD3 Nitrogen regulatory protein P-II [Nitrospirillum amazonens...  169     5e-60


>A0A1P8ELQ1 P-II family nitrogen regulator [Acinetobacter soli]
Length=112

 Score = 216 bits (549),  Expect = 3e-78
 Identities = 112/112 (100%), Positives = 112/112 (100%), Gaps = 0/112 (0%)

Query  1    MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60
            MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK
Sbjct  1    MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60

Query  61   IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV  112
            IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV
Sbjct  61   IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV  112


>A0A6H2CCY7 P-II family nitrogen regulator [Acinetobacter sp. 
NEB149]
Length=112

 Score = 216 bits (549),  Expect = 3e-78
 Identities = 112/112 (100%), Positives = 112/112 (100%), Gaps = 0/112 (0%)

Query  1    MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60
            MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK
Sbjct  1    MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60

Query  61   IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV  112
            IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV
Sbjct  61   IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV  112


>A0A653KS20 Regulatory protein, P-II 2, for nitrogen assimilation 
by glutamine synthetase, regulates GlnL (NRII) and GlnE 
(ATase) [Acinetobacter sp. 8I-beige]
Length=112

 Score = 216 bits (549),  Expect = 3e-78
 Identities = 112/112 (100%), Positives = 112/112 (100%), Gaps = 0/112 (0%)

Query  1    MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60
            MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK
Sbjct  1    MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60

Query  61   IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV  112
            IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV
Sbjct  61   IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV  112


>A0A1T1JFA7 Transcriptional regulator [Acinetobacter sp. MF4640]
Length=112

 Score = 216 bits (549),  Expect = 3e-78
 Identities = 112/112 (100%), Positives = 112/112 (100%), Gaps = 0/112 (0%)

Query  1    MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60
            MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK
Sbjct  1    MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60

Query  61   IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV  112
            IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV
Sbjct  61   IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV  112


>A0A2K8UN03 Nitrogen regulatory protein P-II 2 [Acinetobacter 
lwoffii]
Length=112

 Score = 216 bits (549),  Expect = 3e-78
 Identities = 112/112 (100%), Positives = 112/112 (100%), Gaps = 0/112 (0%)

Query  1    MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60
            MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK
Sbjct  1    MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60

Query  61   IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV  112
            IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV
Sbjct  61   IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV  112


>A0A4R0D6W3 P-II family nitrogen regulator [Acinetobacter sp. 
ANC 5045]
Length=112

 Score = 214 bits (546),  Expect = 8e-78
 Identities = 111/112 (99%), Positives = 112/112 (100%), Gaps = 0/112 (0%)

Query  1    MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60
            MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK
Sbjct  1    MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60

Query  61   IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV  112
            IEIAISDEMVD+VIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV
Sbjct  61   IEIAISDEMVDSVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV  112


>N9B5G3 Nitrogen regulatory protein P-II [Acinetobacter towneri 
DSM 14962 = CIP 107472]
Length=112

 Score = 214 bits (546),  Expect = 8e-78
 Identities = 111/112 (99%), Positives = 112/112 (100%), Gaps = 0/112 (0%)

Query  1    MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60
            MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK
Sbjct  1    MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60

Query  61   IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV  112
            IEIAISDEMVD+VIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV
Sbjct  61   IEIAISDEMVDSVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV  112


>A0A1Y3DJT0 Transcriptional regulator [Acinetobacter sp. ANC 4973]
Length=112

 Score = 214 bits (546),  Expect = 8e-78
 Identities = 111/112 (99%), Positives = 112/112 (100%), Gaps = 0/112 (0%)

Query  1    MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60
            MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK
Sbjct  1    MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60

Query  61   IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV  112
            IEIAISDEMVD+VIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV
Sbjct  61   IEIAISDEMVDSVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV  112


>A0A241VQJ0 Transcriptional regulator [Acinetobacter sp. ANC 4558]
Length=112

 Score = 214 bits (546),  Expect = 8e-78
 Identities = 111/112 (99%), Positives = 112/112 (100%), Gaps = 0/112 (0%)

Query  1    MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60
            MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK
Sbjct  1    MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60

Query  61   IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV  112
            IEIAISDEMVD+VIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV
Sbjct  61   IEIAISDEMVDSVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV  112


>O54449 PII-protein [Azotobacter vinelandii]
Length=112

 Score = 193 bits (491),  Expect = 2e-69
 Identities = 95/112 (85%), Positives = 104/112 (93%), Gaps = 0/112 (0%)

Query  1    MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60
            MKLVTAI+KPFKLDDVRE+LSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK
Sbjct  1    MKLVTAIIKPFKLDDVRESLSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60

Query  61   IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV  112
            I++AI D  +D VIE+IT+ A+TGKIGDGKIFV NLEQ IRIRTGETG DA+
Sbjct  61   IDVAIEDSQLDHVIEAITKAANTGKIGDGKIFVVNLEQAIRIRTGETGTDAI  112


>Q7BBU1 GlnK [Stutzerimonas stutzeri]
Length=112

 Score = 192 bits (488),  Expect = 6e-69
 Identities = 94/112 (84%), Positives = 105/112 (94%), Gaps = 0/112 (0%)

Query  1    MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60
            MKLVTAI+KPFKLDDVRE+LSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK
Sbjct  1    MKLVTAIIKPFKLDDVRESLSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60

Query  61   IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV  112
            I++AI+D+ +D VIE+IT+ A+TGKIGDGKIFV NLEQ IRIRTGET  DA+
Sbjct  61   IDVAIADDQLDRVIEAITKAANTGKIGDGKIFVVNLEQAIRIRTGETDTDAI  112


>Q9EZQ3 PII-like signal transmitter protein GlnK [Azoarcus sp. 
(strain BH72)]
Length=112

 Score = 186 bits (471),  Expect = 2e-66
 Identities = 93/112 (83%), Positives = 102/112 (91%), Gaps = 0/112 (0%)

Query  1    MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60
            MK +TAI+KPFKLD+VREALS IGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK
Sbjct  1    MKFITAIIKPFKLDEVREALSAIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60

Query  61   IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV  112
            IE AI DE++D  IE+I + ASTGKIGDGKIFV +LEQ IRIRTGETGADA+
Sbjct  61   IEAAIRDELLDQAIEAIEKSASTGKIGDGKIFVFDLEQAIRIRTGETGADAL  112


>P94852 Nitrogen regulatory P-II protein [Herbaspirillum seropedicae]
Length=112

 Score = 176 bits (447),  Expect = 1e-62
 Identities = 84/112 (75%), Positives = 100/112 (89%), Gaps = 0/112 (0%)

Query  1    MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60
            MK VTAI+KPFKLD+VRE+L+E+GV G+TVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK
Sbjct  1    MKQVTAIIKPFKLDEVRESLAEVGVTGLTVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60

Query  61   IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV  112
            IE+ + D++V+  +++I + A TGKIGDGKIFV  +EQVIRIRTGETG DAV
Sbjct  61   IEVVVDDKVVEQAVDAIIKAARTGKIGDGKIFVQEVEQVIRIRTGETGPDAV  112


>P94125 Nitrogen regulatory protein P-II [Azorhizobium caulinodans]
Length=112

 Score = 175 bits (443),  Expect = 4e-62
 Identities = 80/112 (71%), Positives = 100/112 (89%), Gaps = 0/112 (0%)

Query  1    MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60
            MK + AI+KPFKLD+V+EAL E+G+QGITVTE KGFGRQKGHTELYRGAEYVVDFLPKVK
Sbjct  1    MKKIEAIIKPFKLDEVKEALQEVGLQGITVTEAKGFGRQKGHTELYRGAEYVVDFLPKVK  60

Query  61   IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV  112
            IE+ ++D+MV+  +E++ R A TG+IGDGKIFV+++E+ IRIRTGETG DA+
Sbjct  61   IEVVLADDMVEKAVEALLRAAQTGRIGDGKIFVSSIEEAIRIRTGETGLDAI  112


>Q9EZQ2 PII-like signal transmitter protein GlnB [Azoarcus sp. 
(strain BH72)]
Length=112

 Score = 172 bits (435),  Expect = 7e-61
 Identities = 78/112 (70%), Positives = 99/112 (88%), Gaps = 0/112 (0%)

Query  1    MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60
            MK + AI+KPFKLD+VREALSE+G+ G+TVTEVKGFGRQKGHTELYRGAEYVVDFLPK+K
Sbjct  1    MKKIEAIIKPFKLDEVREALSEVGIAGLTVTEVKGFGRQKGHTELYRGAEYVVDFLPKIK  60

Query  61   IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV  112
            +E+ ++D+MV+  ++++ + A TGKIGDGKIFVT +EQV+RIRTGET   A+
Sbjct  61   VEVVVADDMVEQTMDAVIKAAQTGKIGDGKIFVTPVEQVVRIRTGETNEAAI  112


>Q7X4H0 Nitrogen regulatory protein P-II 2 [Pseudomonas putida]
Length=99

 Score = 171 bits (432),  Expect = 1e-60
 Identities = 84/98 (86%), Positives = 93/98 (95%), Gaps = 0/98 (0%)

Query  1   MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60
           MKLVTAI+KPFKLDDVRE+LSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK
Sbjct  1   MKLVTAIIKPFKLDDVRESLSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60

Query  61  IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQ  98
           I++AI D+ +D VIE+IT+ A+TGKIGDGKIFV NLEQ
Sbjct  61  IDVAIDDKDLDRVIEAITKAANTGKIGDGKIFVVNLEQ  98


>Q9EZQ4 PII-like signal transmitter protein GlnY [Azoarcus sp. 
(strain BH72)]
Length=112

 Score = 170 bits (430),  Expect = 4e-60
 Identities = 78/112 (70%), Positives = 99/112 (88%), Gaps = 0/112 (0%)

Query  1    MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60
            MKL+TAI++PFKLD+VREAL+ +GV G+TVTE+KGFGRQKGH ELYRGAEYVVDF+PKVK
Sbjct  1    MKLITAIIRPFKLDEVREALAHVGVTGLTVTEIKGFGRQKGHAELYRGAEYVVDFVPKVK  60

Query  61   IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV  112
            +E  ++DE ++A +E+I   A TGKIGDGK+FVT ++Q IRIRTGE+GADA+
Sbjct  61   LETVVADERLEATLEAIQAAAHTGKIGDGKMFVTTVDQTIRIRTGESGADAL  112


>O31188 Nitrogen regulatory protein P-II [Cereibacter sphaeroides]
Length=112

 Score = 170 bits (430),  Expect = 4e-60
 Identities = 81/112 (72%), Positives = 97/112 (87%), Gaps = 0/112 (0%)

Query  1    MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60
            MK + AI+KPFKLD+V+EAL   GVQG++VTEVKGFGRQKGHTELYRGAEYVVDFLPKVK
Sbjct  1    MKKIEAIIKPFKLDEVKEALQAAGVQGLSVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60

Query  61   IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV  112
            IE+ ++D+MV+A +E+I   A T KIGDGKIF++ +EQ IRIRTGETG DAV
Sbjct  61   IEVVLADDMVEAAVEAIVSAARTDKIGDGKIFISPVEQAIRIRTGETGEDAV  112


>D9IPD3 Nitrogen regulatory protein P-II [Nitrospirillum amazonense 
Y2]
Length=112

 Score = 169 bits (429),  Expect = 5e-60
 Identities = 82/112 (73%), Positives = 96/112 (86%), Gaps = 0/112 (0%)

Query  1    MKLVTAIVKPFKLDDVREALSEIGVQGITVTEVKGFGRQKGHTELYRGAEYVVDFLPKVK  60
            MK + AI+KPFKLD+V+EAL E+G++GITVTE KGFGRQKGHTELYRGAEYVVDFLPKVK
Sbjct  1    MKKIEAIIKPFKLDEVKEALHEVGIKGITVTEAKGFGRQKGHTELYRGAEYVVDFLPKVK  60

Query  61   IEIAISDEMVDAVIESITRVASTGKIGDGKIFVTNLEQVIRIRTGETGADAV  112
            IEI + D++VD  IE+I + A TG+IGDGKI VT +E VIRIRTGE G DAV
Sbjct  61   IEIVMDDQLVDRAIEAIQQAAHTGRIGDGKILVTPVEDVIRIRTGERGPDAV  112



Lambda      K        H        a         alpha
   0.323    0.142    0.387    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 128235


  Database: f4eb383efa1c2f1a46d37dafbd26af31.TrEMBL.fasta
    Posted date:  May 20, 2024  3:54 PM
  Number of letters in database: 2,115
  Number of sequences in database:  19



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40