BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: edb055623d953bd4a2e28ee234ee9407.SwissProt.fasta
24 sequences; 3,932 total letters
Query= ACIAD0246
Length=160
Score E
Sequences producing significant alignments: (Bits) Value
Q6FFE5 Transcriptional repressor NrdR [Acinetobacter baylyi (stra... 319 2e-117
B7I302 Transcriptional repressor NrdR [Acinetobacter baumannii (s... 294 1e-107
B7H1Q6 Transcriptional repressor NrdR [Acinetobacter baumannii (s... 294 1e-107
B0VDB2 Transcriptional repressor NrdR [Acinetobacter baumannii (s... 294 1e-107
A3M1A1 Transcriptional repressor NrdR [Acinetobacter baumannii (s... 294 1e-107
B0VMH0 Transcriptional repressor NrdR [Acinetobacter baumannii (s... 294 1e-107
Q4FPR9 Transcriptional repressor NrdR [Psychrobacter arcticus (st... 201 1e-70
Q1Q7V5 Transcriptional repressor NrdR [Psychrobacter cryohalolent... 199 6e-70
A5WI35 Transcriptional repressor NrdR [Psychrobacter sp. (strain ... 198 1e-69
Q9HWX1 Transcriptional repressor NrdR [Pseudomonas aeruginosa (st... 192 2e-67
Q02SM4 Transcriptional repressor NrdR [Pseudomonas aeruginosa (st... 192 2e-67
B7V7Q1 Transcriptional repressor NrdR [Pseudomonas aeruginosa (st... 192 2e-67
C1DLH3 Transcriptional repressor NrdR [Azotobacter vinelandii (st... 192 2e-67
A1TYW9 Transcriptional repressor NrdR [Marinobacter nauticus (str... 193 2e-67
Q4K592 Transcriptional repressor NrdR [Pseudomonas fluorescens (s... 191 5e-67
Q2S9R5 Transcriptional repressor NrdR [Hahella chejuensis (strain... 192 6e-67
P0A8D0 Transcriptional repressor NrdR [Escherichia coli (strain K... 178 9e-62
P33661 Transcriptional repressor NrdR [Clostridium acetobutylicum... 137 2e-45
P46227 Transcriptional repressor NrdR [Synechococcus sp. (strain ... 136 6e-45
Q45549 Transcriptional repressor NrdR [Bacillus subtilis (strain ... 131 3e-43
P9WIZ1 Transcriptional repressor NrdR [Mycobacterium tuberculosis... 116 2e-37
O86848 Transcriptional repressor NrdR [Streptomyces clavuligerus] 117 2e-37
O69980 Transcriptional repressor NrdR [Streptomyces coelicolor (s... 115 1e-36
Q47823 D-alanine--D-alanine ligase [Enterococcus gallinarum] 34.3 7e-06
>Q6FFE5 Transcriptional repressor NrdR [Acinetobacter baylyi (strain
ATCC 33305 / BD413 / ADP1)]
Length=159
Score = 319 bits (817), Expect = 2e-117
Identities = 159/159 (100%), Positives = 159/159 (100%), Gaps = 0/159 (0%)
Query 1 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECISCGERFTTFESYEVVMPRVIKSNGKNEP 60
MHCPFCNAADSKVIDSRLAAEGCQIRRRRECISCGERFTTFESYEVVMPRVIKSNGKNEP
Sbjct 1 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECISCGERFTTFESYEVVMPRVIKSNGKNEP 60
Query 61 FDEAKLRRSLMHALQKRPVTQEQIEAVLSDIQLKIRRLGERDVKSRMIGEIVMQALFALD 120
FDEAKLRRSLMHALQKRPVTQEQIEAVLSDIQLKIRRLGERDVKSRMIGEIVMQALFALD
Sbjct 61 FDEAKLRRSLMHALQKRPVTQEQIEAVLSDIQLKIRRLGERDVKSRMIGEIVMQALFALD 120
Query 121 HVAYVRFASVYQDFQDVEAFRRQIEQMQQREQECEKHDV 159
HVAYVRFASVYQDFQDVEAFRRQIEQMQQREQECEKHDV
Sbjct 121 HVAYVRFASVYQDFQDVEAFRRQIEQMQQREQECEKHDV 159
>B7I302 Transcriptional repressor NrdR [Acinetobacter baumannii
(strain AB0057)]
Length=152
Score = 294 bits (752), Expect = 1e-107
Identities = 146/151 (97%), Positives = 149/151 (99%), Gaps = 0/151 (0%)
Query 1 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECISCGERFTTFESYEVVMPRVIKSNGKNEP 60
MHCPFCNAADSKVIDSRLAAEGCQIRRRREC+SCGERFTTFESYEVVMPRVIKSNGKNEP
Sbjct 1 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECVSCGERFTTFESYEVVMPRVIKSNGKNEP 60
Query 61 FDEAKLRRSLMHALQKRPVTQEQIEAVLSDIQLKIRRLGERDVKSRMIGEIVMQALFALD 120
FDEAKLRRSLMHALQKRPVTQEQIE VLSDIQL+IRRLGERDVKSR IGEIVMQ+LFALD
Sbjct 61 FDEAKLRRSLMHALQKRPVTQEQIETVLSDIQLQIRRLGERDVKSRTIGEIVMQSLFALD 120
Query 121 HVAYVRFASVYQDFQDVEAFRRQIEQMQQRE 151
HVAYVRFASVYQDFQDVEAFRRQIEQMQQRE
Sbjct 121 HVAYVRFASVYQDFQDVEAFRRQIEQMQQRE 151
>B7H1Q6 Transcriptional repressor NrdR [Acinetobacter baumannii
(strain AB307-0294)]
Length=152
Score = 294 bits (752), Expect = 1e-107
Identities = 146/151 (97%), Positives = 149/151 (99%), Gaps = 0/151 (0%)
Query 1 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECISCGERFTTFESYEVVMPRVIKSNGKNEP 60
MHCPFCNAADSKVIDSRLAAEGCQIRRRREC+SCGERFTTFESYEVVMPRVIKSNGKNEP
Sbjct 1 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECVSCGERFTTFESYEVVMPRVIKSNGKNEP 60
Query 61 FDEAKLRRSLMHALQKRPVTQEQIEAVLSDIQLKIRRLGERDVKSRMIGEIVMQALFALD 120
FDEAKLRRSLMHALQKRPVTQEQIE VLSDIQL+IRRLGERDVKSR IGEIVMQ+LFALD
Sbjct 61 FDEAKLRRSLMHALQKRPVTQEQIETVLSDIQLQIRRLGERDVKSRTIGEIVMQSLFALD 120
Query 121 HVAYVRFASVYQDFQDVEAFRRQIEQMQQRE 151
HVAYVRFASVYQDFQDVEAFRRQIEQMQQRE
Sbjct 121 HVAYVRFASVYQDFQDVEAFRRQIEQMQQRE 151
>B0VDB2 Transcriptional repressor NrdR [Acinetobacter baumannii
(strain AYE)]
Length=152
Score = 294 bits (752), Expect = 1e-107
Identities = 146/151 (97%), Positives = 149/151 (99%), Gaps = 0/151 (0%)
Query 1 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECISCGERFTTFESYEVVMPRVIKSNGKNEP 60
MHCPFCNAADSKVIDSRLAAEGCQIRRRREC+SCGERFTTFESYEVVMPRVIKSNGKNEP
Sbjct 1 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECVSCGERFTTFESYEVVMPRVIKSNGKNEP 60
Query 61 FDEAKLRRSLMHALQKRPVTQEQIEAVLSDIQLKIRRLGERDVKSRMIGEIVMQALFALD 120
FDEAKLRRSLMHALQKRPVTQEQIE VLSDIQL+IRRLGERDVKSR IGEIVMQ+LFALD
Sbjct 61 FDEAKLRRSLMHALQKRPVTQEQIETVLSDIQLQIRRLGERDVKSRTIGEIVMQSLFALD 120
Query 121 HVAYVRFASVYQDFQDVEAFRRQIEQMQQRE 151
HVAYVRFASVYQDFQDVEAFRRQIEQMQQRE
Sbjct 121 HVAYVRFASVYQDFQDVEAFRRQIEQMQQRE 151
>A3M1A1 Transcriptional repressor NrdR [Acinetobacter baumannii
(strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377)]
Length=152
Score = 294 bits (752), Expect = 1e-107
Identities = 146/151 (97%), Positives = 149/151 (99%), Gaps = 0/151 (0%)
Query 1 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECISCGERFTTFESYEVVMPRVIKSNGKNEP 60
MHCPFCNAADSKVIDSRLAAEGCQIRRRREC+SCGERFTTFESYEVVMPRVIKSNGKNEP
Sbjct 1 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECVSCGERFTTFESYEVVMPRVIKSNGKNEP 60
Query 61 FDEAKLRRSLMHALQKRPVTQEQIEAVLSDIQLKIRRLGERDVKSRMIGEIVMQALFALD 120
FDEAKLRRSLMHALQKRPVTQEQIE VLSDIQL+IRRLGERDVKSR IGEIVMQ+LFALD
Sbjct 61 FDEAKLRRSLMHALQKRPVTQEQIETVLSDIQLQIRRLGERDVKSRTIGEIVMQSLFALD 120
Query 121 HVAYVRFASVYQDFQDVEAFRRQIEQMQQRE 151
HVAYVRFASVYQDFQDVEAFRRQIEQMQQRE
Sbjct 121 HVAYVRFASVYQDFQDVEAFRRQIEQMQQRE 151
>B0VMH0 Transcriptional repressor NrdR [Acinetobacter baumannii
(strain SDF)]
Length=152
Score = 294 bits (752), Expect = 1e-107
Identities = 146/151 (97%), Positives = 149/151 (99%), Gaps = 0/151 (0%)
Query 1 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECISCGERFTTFESYEVVMPRVIKSNGKNEP 60
MHCPFCNAADSKVIDSRLAAEGCQIRRRREC+SCGERFTTFESYEVVMPRVIKSNGKNEP
Sbjct 1 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECVSCGERFTTFESYEVVMPRVIKSNGKNEP 60
Query 61 FDEAKLRRSLMHALQKRPVTQEQIEAVLSDIQLKIRRLGERDVKSRMIGEIVMQALFALD 120
FDEAKLRRSLMHALQKRPVTQEQIE VLSDIQL+IRRLGERDVKSR IGEIVMQ+LFALD
Sbjct 61 FDEAKLRRSLMHALQKRPVTQEQIETVLSDIQLQIRRLGERDVKSRTIGEIVMQSLFALD 120
Query 121 HVAYVRFASVYQDFQDVEAFRRQIEQMQQRE 151
HVAYVRFASVYQDFQDVEAFRRQIEQMQQRE
Sbjct 121 HVAYVRFASVYQDFQDVEAFRRQIEQMQQRE 151
>Q4FPR9 Transcriptional repressor NrdR [Psychrobacter arcticus
(strain DSM 17307 / VKM B-2377 / 273-4)]
Length=152
Score = 201 bits (510), Expect = 1e-70
Identities = 93/152 (61%), Positives = 126/152 (83%), Gaps = 0/152 (0%)
Query 1 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECISCGERFTTFESYEVVMPRVIKSNGKNEP 60
MHCP+CNA+D+KVIDSRLAAEG Q+RRRR C SC ERFTTFE EVVMPR+IKS+GK EP
Sbjct 1 MHCPYCNASDTKVIDSRLAAEGAQVRRRRSCNSCQERFTTFEVVEVVMPRIIKSSGKIEP 60
Query 61 FDEAKLRRSLMHALQKRPVTQEQIEAVLSDIQLKIRRLGERDVKSRMIGEIVMQALFALD 120
+D KLRRS++ LQKRP+T ++ EA++S I+ ++R++GER+V S+++GEI+M L LD
Sbjct 61 YDNDKLRRSILLPLQKRPITIDEQEAMISRIEKRVRQMGEREVSSKVLGEIIMSELKTLD 120
Query 121 HVAYVRFASVYQDFQDVEAFRRQIEQMQQREQ 152
VAYVRFASVY+DFQD++AF ++I ++ ++
Sbjct 121 DVAYVRFASVYRDFQDIDAFHQEIANIRPNDK 152
>Q1Q7V5 Transcriptional repressor NrdR [Psychrobacter cryohalolentis
(strain ATCC BAA-1226 / DSM 17306 / VKM B-2378 / K5)]
Length=152
Score = 199 bits (505), Expect = 6e-70
Identities = 92/152 (61%), Positives = 125/152 (82%), Gaps = 0/152 (0%)
Query 1 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECISCGERFTTFESYEVVMPRVIKSNGKNEP 60
MHCP+CNA+++KVIDSRLAAEG Q+RRRR C SC ERFTTFE EVVMPR+IKS+GK EP
Sbjct 1 MHCPYCNASETKVIDSRLAAEGAQVRRRRSCNSCQERFTTFEVVEVVMPRIIKSSGKIEP 60
Query 61 FDEAKLRRSLMHALQKRPVTQEQIEAVLSDIQLKIRRLGERDVKSRMIGEIVMQALFALD 120
+D KLRRS++ LQKRP+T ++ E ++S I+ ++R++GER+V S+++GEI+M L LD
Sbjct 61 YDNDKLRRSILLPLQKRPITIDEQEGMISRIEKRVRQMGEREVSSKVLGEIIMSELKTLD 120
Query 121 HVAYVRFASVYQDFQDVEAFRRQIEQMQQREQ 152
VAYVRFASVY+DFQD++AF ++I ++ E+
Sbjct 121 DVAYVRFASVYRDFQDIDAFHQEIANIRPNEK 152
>A5WI35 Transcriptional repressor NrdR [Psychrobacter sp. (strain
PRwf-1)]
Length=153
Score = 198 bits (503), Expect = 1e-69
Identities = 93/153 (61%), Positives = 125/153 (82%), Gaps = 0/153 (0%)
Query 1 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECISCGERFTTFESYEVVMPRVIKSNGKNEP 60
M CP+CNA D+KVIDSRLAAEG Q+RRRR+C C ERFTTFE EVVMPR+IKSNG+ EP
Sbjct 1 MQCPYCNADDTKVIDSRLAAEGAQVRRRRQCNQCQERFTTFEVVEVVMPRIIKSNGRIEP 60
Query 61 FDEAKLRRSLMHALQKRPVTQEQIEAVLSDIQLKIRRLGERDVKSRMIGEIVMQALFALD 120
+D KL+RS+ LQKRPVT ++ EA++S I+ +IR+LGER++ S+ +GE+VM L LD
Sbjct 61 YDSQKLKRSIQLPLQKRPVTLDEQEAMISRIEKRIRQLGEREISSKGLGEVVMSELKELD 120
Query 121 HVAYVRFASVYQDFQDVEAFRRQIEQMQQREQE 153
VAYVRFASVY+DFQD+EAFR++++ ++ +++
Sbjct 121 DVAYVRFASVYRDFQDIEAFRQELQNIRPVDEQ 153
>Q9HWX1 Transcriptional repressor NrdR [Pseudomonas aeruginosa
(strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG
12228 / 1C / PRS 101 / PAO1)]
Length=154
Score = 192 bits (489), Expect = 2e-67
Identities = 89/147 (61%), Positives = 118/147 (80%), Gaps = 0/147 (0%)
Query 1 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECISCGERFTTFESYEVVMPRVIKSNGKNEP 60
MHCPFC A D+KVIDSRL AEG Q+RRRREC++CGERFTTFE+ E+VMPR+IK +G +P
Sbjct 1 MHCPFCGAHDTKVIDSRLVAEGDQVRRRRECLACGERFTTFETAELVMPRLIKQDGSRQP 60
Query 61 FDEAKLRRSLMHALQKRPVTQEQIEAVLSDIQLKIRRLGERDVKSRMIGEIVMQALFALD 120
FDE KLR + AL+KRPV+ E++EA + I+ ++R GER++KSR++GE+VM L LD
Sbjct 61 FDEDKLRAGMQRALEKRPVSVERLEAAIGHIKHQLRATGEREIKSRVLGELVMAELQKLD 120
Query 121 HVAYVRFASVYQDFQDVEAFRRQIEQM 147
VAY+RFASVY+ FQD+ FR +IE++
Sbjct 121 EVAYIRFASVYRRFQDLNEFREEIERL 147
>Q02SM4 Transcriptional repressor NrdR [Pseudomonas aeruginosa
(strain UCBPP-PA14)]
Length=154
Score = 192 bits (489), Expect = 2e-67
Identities = 89/147 (61%), Positives = 118/147 (80%), Gaps = 0/147 (0%)
Query 1 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECISCGERFTTFESYEVVMPRVIKSNGKNEP 60
MHCPFC A D+KVIDSRL AEG Q+RRRREC++CGERFTTFE+ E+VMPR+IK +G +P
Sbjct 1 MHCPFCGAHDTKVIDSRLVAEGDQVRRRRECLACGERFTTFETAELVMPRLIKQDGSRQP 60
Query 61 FDEAKLRRSLMHALQKRPVTQEQIEAVLSDIQLKIRRLGERDVKSRMIGEIVMQALFALD 120
FDE KLR + AL+KRPV+ E++EA + I+ ++R GER++KSR++GE+VM L LD
Sbjct 61 FDEDKLRAGMQRALEKRPVSVERLEAAIGHIKHQLRATGEREIKSRVLGELVMAELQKLD 120
Query 121 HVAYVRFASVYQDFQDVEAFRRQIEQM 147
VAY+RFASVY+ FQD+ FR +IE++
Sbjct 121 EVAYIRFASVYRRFQDLNEFREEIERL 147
>B7V7Q1 Transcriptional repressor NrdR [Pseudomonas aeruginosa
(strain LESB58)]
Length=154
Score = 192 bits (489), Expect = 2e-67
Identities = 89/147 (61%), Positives = 118/147 (80%), Gaps = 0/147 (0%)
Query 1 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECISCGERFTTFESYEVVMPRVIKSNGKNEP 60
MHCPFC A D+KVIDSRL AEG Q+RRRREC++CGERFTTFE+ E+VMPR+IK +G +P
Sbjct 1 MHCPFCGAHDTKVIDSRLVAEGDQVRRRRECLACGERFTTFETAELVMPRLIKQDGSRQP 60
Query 61 FDEAKLRRSLMHALQKRPVTQEQIEAVLSDIQLKIRRLGERDVKSRMIGEIVMQALFALD 120
FDE KLR + AL+KRPV+ E++EA + I+ ++R GER++KSR++GE+VM L LD
Sbjct 61 FDEDKLRAGMQRALEKRPVSVERLEAAIGHIKHQLRATGEREIKSRVLGELVMAELQKLD 120
Query 121 HVAYVRFASVYQDFQDVEAFRRQIEQM 147
VAY+RFASVY+ FQD+ FR +IE++
Sbjct 121 EVAYIRFASVYRRFQDLNEFREEIERL 147
>C1DLH3 Transcriptional repressor NrdR [Azotobacter vinelandii
(strain DJ / ATCC BAA-1303)]
Length=154
Score = 192 bits (489), Expect = 2e-67
Identities = 91/149 (61%), Positives = 119/149 (80%), Gaps = 0/149 (0%)
Query 1 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECISCGERFTTFESYEVVMPRVIKSNGKNEP 60
MHCPFC+A D+KVIDSRL AEG Q+RRRREC +CGERFTTFE+ E+VMPRVIK +G +P
Sbjct 1 MHCPFCSAHDTKVIDSRLVAEGDQVRRRRECQACGERFTTFETAELVMPRVIKQDGSRQP 60
Query 61 FDEAKLRRSLMHALQKRPVTQEQIEAVLSDIQLKIRRLGERDVKSRMIGEIVMQALFALD 120
FDE KLR + AL+KRPV+ E++EA + I+ ++R GER+VKSR++GE+VM L LD
Sbjct 61 FDEDKLRAGMQRALEKRPVSVERLEAAIGRIKHELRATGEREVKSRVLGELVMAELRKLD 120
Query 121 HVAYVRFASVYQDFQDVEAFRRQIEQMQQ 149
VAY+RFASVY+ FQD+ FR +IE++ +
Sbjct 121 EVAYIRFASVYRRFQDLNEFREEIERLSR 149
>A1TYW9 Transcriptional repressor NrdR [Marinobacter nauticus
(strain ATCC 700491 / DSM 11845 / VT8)]
Length=172
Score = 193 bits (490), Expect = 2e-67
Identities = 92/149 (62%), Positives = 117/149 (79%), Gaps = 0/149 (0%)
Query 1 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECISCGERFTTFESYEVVMPRVIKSNGKNEP 60
MHCPFC AD+KVIDSRL AEG Q+RRRREC+SC ERFTTFE+ E+VMPRV+K +G +P
Sbjct 1 MHCPFCGEADTKVIDSRLVAEGDQVRRRRECLSCRERFTTFETAELVMPRVVKQDGTRQP 60
Query 61 FDEAKLRRSLMHALQKRPVTQEQIEAVLSDIQLKIRRLGERDVKSRMIGEIVMQALFALD 120
FDE KLR +M AL+KRPV+ E+I+A L+ I+ ++R GER+VKS +GE VM L LD
Sbjct 61 FDEEKLRAGIMKALEKRPVSIEEIDAALNRIKYRLRSTGEREVKSMQLGEEVMTELRQLD 120
Query 121 HVAYVRFASVYQDFQDVEAFRRQIEQMQQ 149
VAYVRFASVY+ FQD+ F+ +IE++ Q
Sbjct 121 KVAYVRFASVYRSFQDINEFKEEIERLSQ 149
>Q4K592 Transcriptional repressor NrdR [Pseudomonas fluorescens
(strain ATCC BAA-477 / NRRL B-23932 / Pf-5)]
Length=154
Score = 191 bits (486), Expect = 5e-67
Identities = 90/147 (61%), Positives = 118/147 (80%), Gaps = 0/147 (0%)
Query 1 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECISCGERFTTFESYEVVMPRVIKSNGKNEP 60
MHCPFC A D+KVIDSRL AEG Q+RRRREC++CGERFTTFE+ E+VMPR+IK++G +P
Sbjct 1 MHCPFCGANDTKVIDSRLVAEGEQVRRRRECLACGERFTTFETAELVMPRLIKTDGSRQP 60
Query 61 FDEAKLRRSLMHALQKRPVTQEQIEAVLSDIQLKIRRLGERDVKSRMIGEIVMQALFALD 120
FDE KLR + AL+KRPV+ E++EA L I+ K+R GER+VKS ++GE+VM L LD
Sbjct 61 FDEEKLRAGMQRALEKRPVSVERLEAALVHIKHKLRATGEREVKSLVVGELVMTELQKLD 120
Query 121 HVAYVRFASVYQDFQDVEAFRRQIEQM 147
VAY+RFASVY+ FQD+ FR +I+++
Sbjct 121 EVAYIRFASVYRRFQDLNEFREEIDRL 147
>Q2S9R5 Transcriptional repressor NrdR [Hahella chejuensis (strain
KCTC 2396)]
Length=170
Score = 192 bits (487), Expect = 6e-67
Identities = 89/149 (60%), Positives = 119/149 (80%), Gaps = 0/149 (0%)
Query 1 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECISCGERFTTFESYEVVMPRVIKSNGKNEP 60
MHCPFC+AAD+KVIDSRL A+G Q+RRRREC+SC ERFTT+E+ E+VMPRV+K +G EP
Sbjct 1 MHCPFCSAADTKVIDSRLVADGSQVRRRRECVSCSERFTTYEAAELVMPRVVKQDGTREP 60
Query 61 FDEAKLRRSLMHALQKRPVTQEQIEAVLSDIQLKIRRLGERDVKSRMIGEIVMQALFALD 120
FDE KLR + AL+KRPV+ E+IEA + I+ ++R GER++ SR+IGE VM L LD
Sbjct 61 FDEDKLRAGFLKALEKRPVSMEEIEAAVDRIKFRLRATGERELNSRVIGEEVMSELRELD 120
Query 121 HVAYVRFASVYQDFQDVEAFRRQIEQMQQ 149
VA+VRFASVY+ FQD++ FR +I+++ +
Sbjct 121 QVAFVRFASVYRRFQDLDEFRAEIDKLSR 149
>P0A8D0 Transcriptional repressor NrdR [Escherichia coli (strain
K12)]
Length=149
Score = 178 bits (451), Expect = 9e-62
Identities = 81/148 (55%), Positives = 112/148 (76%), Gaps = 0/148 (0%)
Query 1 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECISCGERFTTFESYEVVMPRVIKSNGKNEP 60
MHCPFC A D+KVIDSRL EG +RRRR+C+ C ERFTTFE E+VMPRV+KSN EP
Sbjct 1 MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREP 60
Query 61 FDEAKLRRSLMHALQKRPVTQEQIEAVLSDIQLKIRRLGERDVKSRMIGEIVMQALFALD 120
F+E KLR ++ AL+KRPV+ + +E ++ I+ ++R GER+V S+MIG +VM+ L LD
Sbjct 61 FNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLD 120
Query 121 HVAYVRFASVYQDFQDVEAFRRQIEQMQ 148
VAY+RFASVY+ F+D++ F +I +++
Sbjct 121 KVAYIRFASVYRSFEDIKEFGEEIARLE 148
>P33661 Transcriptional repressor NrdR [Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787)]
Length=151
Score = 137 bits (344), Expect = 2e-45
Identities = 65/144 (45%), Positives = 96/144 (67%), Gaps = 0/144 (0%)
Query 1 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECISCGERFTTFESYEVVMPRVIKSNGKNEP 60
M CPFC ++SKV+DSR + IRRRREC+ C +R+TT+E E + VIK + E
Sbjct 1 MKCPFCGYSESKVVDSRSTEDNMAIRRRRECLECSKRYTTYEKVEDIPILVIKKDSSREF 60
Query 61 FDEAKLRRSLMHALQKRPVTQEQIEAVLSDIQLKIRRLGERDVKSRMIGEIVMQALFALD 120
FD++K+ L+ + +KRPV+++QIE + SD++ I +VKS IGE+VM+ L +D
Sbjct 61 FDKSKVINGLIKSCEKRPVSRQQIEDIASDVEKSISNQMVTEVKSDAIGEMVMEKLKEID 120
Query 121 HVAYVRFASVYQDFQDVEAFRRQI 144
+AYVRFASVY+ F+D+ F +I
Sbjct 121 EIAYVRFASVYRQFKDINTFMEEI 144
>P46227 Transcriptional repressor NrdR [Synechococcus sp. (strain
ATCC 27144 / PCC 6301 / SAUG 1402/1)]
Length=168
Score = 136 bits (342), Expect = 6e-45
Identities = 65/153 (42%), Positives = 100/153 (65%), Gaps = 0/153 (0%)
Query 1 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECISCGERFTTFESYEVVMPRVIKSNGKNEP 60
M CP C DS+V++SR + G +RRRREC+SCG RFTT+E E V VIK NG E
Sbjct 1 MQCPACRHTDSRVLESRSSESGRSVRRRRECLSCGHRFTTYERVEFVPISVIKRNGDRES 60
Query 61 FDEAKLRRSLMHALQKRPVTQEQIEAVLSDIQLKIRRLGERDVKSRMIGEIVMQALFALD 120
FD +KL R ++ A +K V+ +Q++ ++ +I+ +++ RDV+S IGE+V+Q + L
Sbjct 61 FDRSKLLRGIVRACEKTGVSAQQMDLLVDEIEGTLQQRSSRDVQSSEIGEMVLQQIGRLS 120
Query 121 HVAYVRFASVYQDFQDVEAFRRQIEQMQQREQE 153
VAY+RFASVY+ F+ V F ++++Q ++
Sbjct 121 EVAYIRFASVYRQFRGVRDFVETLDRLQDLSRD 153
>Q45549 Transcriptional repressor NrdR [Bacillus subtilis (strain
168)]
Length=152
Score = 131 bits (329), Expect = 3e-43
Identities = 66/152 (43%), Positives = 96/152 (63%), Gaps = 0/152 (0%)
Query 1 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECISCGERFTTFESYEVVMPRVIKSNGKNEP 60
M CP C ++V+DSR +G IRRRREC SC RFTTFE E V+K G E
Sbjct 1 MKCPSCQHNGTRVLDSRPVDDGKSIRRRRECESCHYRFTTFEKVEETPLIVVKKEGVREE 60
Query 61 FDEAKLRRSLMHALQKRPVTQEQIEAVLSDIQLKIRRLGERDVKSRMIGEIVMQALFALD 120
F K+ R L+ A +KRPV+ + +E + DI+ ++R G +VKS ++GE+VM L +D
Sbjct 61 FSREKMLRGLIKACEKRPVSLKTLEDMCFDIEKELRNQGCSEVKSELVGEMVMDRLAKID 120
Query 121 HVAYVRFASVYQDFQDVEAFRRQIEQMQQREQ 152
VAYVRFASVY+ F+D+ F +++ + ++E+
Sbjct 121 EVAYVRFASVYRQFKDINVFIDELKDLIKKER 152
>P9WIZ1 Transcriptional repressor NrdR [Mycobacterium tuberculosis
(strain ATCC 25618 / H37Rv)]
Length=154
Score = 116 bits (291), Expect = 2e-37
Identities = 60/148 (41%), Positives = 84/148 (57%), Gaps = 3/148 (2%)
Query 1 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECISCGERFTTFESYEVVMPRVIKSNGKNEP 60
MHCPFC DS+VIDSR EG IRRRR C CG RFTT E+ + V+K +G EP
Sbjct 1 MHCPFCRHPDSRVIDSRETDEGQAIRRRRSCPECGRRFTTVETAVLA---VVKRSGVTEP 57
Query 61 FDEAKLRRSLMHALQKRPVTQEQIEAVLSDIQLKIRRLGERDVKSRMIGEIVMQALFALD 120
F K+ + A Q R V + + + ++ +R G ++ S +G ++ L LD
Sbjct 58 FSREKVISGVRRACQGRQVDDDALNLLAQQVEDSVRAAGSPEIPSHDVGLAILGPLRELD 117
Query 121 HVAYVRFASVYQDFQDVEAFRRQIEQMQ 148
VAY+RFASVY+ F + F R+IE ++
Sbjct 118 EVAYLRFASVYRSFSSADDFAREIEALR 145
>O86848 Transcriptional repressor NrdR [Streptomyces clavuligerus]
Length=172
Score = 117 bits (292), Expect = 2e-37
Identities = 59/156 (38%), Positives = 90/156 (58%), Gaps = 3/156 (2%)
Query 1 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECISCGERFTTFESYEVVMPRVIKSNGKNEP 60
MHCPFC DS+V+DSR +G IRRRR+C C RFTT E+ ++ VIK +G EP
Sbjct 1 MHCPFCRHPDSRVVDSRTTDDGTSIRRRRQCPDCSRRFTTVETASLM---VIKRSGVTEP 57
Query 61 FDEAKLRRSLMHALQKRPVTQEQIEAVLSDIQLKIRRLGERDVKSRMIGEIVMQALFALD 120
F K+ + A Q RPVT++ + + ++ +R G ++ + +G ++ L LD
Sbjct 58 FSRTKVISGVRKACQGRPVTEDALAQLGQRVEEAVRATGSAELTTHDVGLAILGPLQELD 117
Query 121 HVAYVRFASVYQDFQDVEAFRRQIEQMQQREQECEK 156
VAY+RFASVY+ F +E F I ++++ E+
Sbjct 118 LVAYLRFASVYRAFDSLEDFEAAIAELREHRLPAER 153
>O69980 Transcriptional repressor NrdR [Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145)]
Length=182
Score = 115 bits (288), Expect = 1e-36
Identities = 57/149 (38%), Positives = 88/149 (59%), Gaps = 3/149 (2%)
Query 1 MHCPFCNAADSKVIDSRLAAEGCQIRRRRECISCGERFTTFESYEVVMPRVIKSNGKNEP 60
MHCPFC DS+V+DSR +G IRRRR+C C RFTT E+ ++ V+K +G EP
Sbjct 1 MHCPFCRHPDSRVVDSRTTDDGTSIRRRRQCPDCSRRFTTVETCSLM---VVKRSGVTEP 57
Query 61 FDEAKLRRSLMHALQKRPVTQEQIEAVLSDIQLKIRRLGERDVKSRMIGEIVMQALFALD 120
F K+ + A Q RPVT++ + + ++ +R G ++ + +G ++ L LD
Sbjct 58 FSRTKVINGVRKACQGRPVTEDALAQLGQRVEEAVRATGSAELTTHDVGLAILGPLQELD 117
Query 121 HVAYVRFASVYQDFQDVEAFRRQIEQMQQ 149
VAY+RFASVY+ F +E F I ++++
Sbjct 118 LVAYLRFASVYRAFDSLEDFEAAIAELRE 146
>Q47823 D-alanine--D-alanine ligase [Enterococcus gallinarum]
Length=316
Score = 34.3 bits (77), Expect = 7e-06
Identities = 37/123 (30%), Positives = 59/123 (48%), Gaps = 14/123 (11%)
Query 41 FESYE--VVMPRVIK--SNGKNEPFDEAKLRRSLMHALQK--RPVTQEQIEAVLSDIQLK 94
FE E ++ P IK + G + +A+ R L +ALQ+ R T+ +E + +++
Sbjct 158 FEQCEGSLLYPMFIKPANMGSSVGITKAENREELQNALQEAYRYDTRAIVEQGIEAREIE 217
Query 95 IRRLGERDVKSRMIGEIVMQALFALDHVAYVRFASVYQDFQDVEAFRRQI-EQMQQREQE 153
+ LG DV++ M GEIV VA+ + S Y D + QI E+ Q + QE
Sbjct 218 VAVLGNEDVRTTMPGEIVKD-------VAFYDYNSKYLDNKIEMQIPAQIPEETQAKAQE 270
Query 154 CEK 156
K
Sbjct 271 FAK 273
Lambda K H a alpha
0.328 0.138 0.404 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 368440
Database: edb055623d953bd4a2e28ee234ee9407.SwissProt.fasta
Posted date: May 13, 2024 9:18 AM
Number of letters in database: 3,932
Number of sequences in database: 24
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
