BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 5f48924e200d666a2f80a7f4360aa091.SwissProt.fasta
21 sequences; 11,995 total letters
Query= ACIAD0257
Length=394
Score E
Sequences producing significant alignments: (Bits) Value
Q44879 Carboxy-terminal-processing protease [Bartonella bacillifo... 162 8e-49
Q4L6D0 Probable CtpA-like serine protease [Staphylococcus haemoly... 162 3e-48
Q2YXZ9 Probable CtpA-like serine protease [Staphylococcus aureus ... 161 6e-48
Q7A5M9 Probable CtpA-like serine protease [Staphylococcus aureus ... 161 9e-48
Q99U67 Probable CtpA-like serine protease [Staphylococcus aureus ... 161 9e-48
Q5HPB7 Probable CtpA-like serine protease [Staphylococcus epiderm... 160 2e-47
Q6GGY8 Probable CtpA-like serine protease [Staphylococcus aureus ... 160 2e-47
Q8NWR2 Probable CtpA-like serine protease [Staphylococcus aureus ... 160 2e-47
Q6G9E1 Probable CtpA-like serine protease [Staphylococcus aureus ... 160 2e-47
Q5HG01 Probable CtpA-like serine protease [Staphylococcus aureus ... 160 2e-47
Q8CSK8 Probable CtpA-like serine protease [Staphylococcus epiderm... 159 4e-47
Q49XN1 Probable CtpA-like serine protease [Staphylococcus saproph... 147 7e-43
Q55669 Carboxyl-terminal-processing protease [Synechocystis sp. (... 144 4e-42
O34666 Carboxy-terminal processing protease CtpA [Bacillus subtil... 143 3e-41
P42784 Carboxyl-terminal-processing protease [Synechococcus sp. (... 137 1e-39
O35002 Carboxy-terminal processing protease CtpB [Bacillus subtil... 117 4e-32
O04073 C-terminal processing peptidase, chloroplastic [Tetradesmu... 115 2e-31
P23865 Tail-specific protease [Escherichia coli (strain K12)] 97.1 1e-24
P43669 Tail-specific protease [Salmonella typhimurium (strain LT2... 94.0 1e-23
Q7SZI7 Retinol-binding protein 3 [Xenopus laevis] 49.3 3e-09
P12661 Retinol-binding protein 3 [Bos taurus] 42.7 3e-07
>Q44879 Carboxy-terminal-processing protease [Bartonella bacilliformis
(strain ATCC 35685 / KC583 / Herrer 020/F12,63)]
Length=434
Score = 162 bits (411), Expect = 8e-49
Identities = 110/342 (32%), Positives = 182/342 (53%), Gaps = 22/342 (6%)
Query 49 ESIQQFVQIYNLVKDNYVEAKSDDALFQQAIKGLVSGLDRYSRYLSPEDYKQLVQYTEGD 108
+ + +F I+ V+ YV D L + AI G++ LD +S Y+ E K + T+G+
Sbjct 35 KQLARFGDIFERVRTQYVTIPDDQKLIENAINGMLLSLDPHSSYMDAEKAKDMRDSTKGE 94
Query 109 LASVDFALVYDARIHQWVVRDLKEGADSYKLGLRNGQNVLKIDGQDL--QTLNH--DQVH 164
+ + + + + VV + + + K G+ G + KIDG+ + QTLN DQ+
Sbjct 95 FGGLGIEVTMENNLIK-VVSPIDD-TPAAKAGVLAGDFISKIDGKQISGQTLNEAVDQMR 152
Query 165 TLLYGSIGTPIQI--------QTAEMPVSQTLIRNKKIEADVQPILLHNQVLVLKVKVFQ 216
G GTPI + + ++ + + +I+ K ++ V+ + + +++ K F
Sbjct 153 ----GPAGTPITLTINRFGVDKPLDIKIVRDIIKVKAVKYRVEGDIGYLRLIQFTEKTFS 208
Query 217 QDTANEIKRLLEEYGSPRLKAVIIDLRNNPGGLLSAAVESADLFLNQGIIVSTKSRSEGN 276
D IK + + + +LK ++DLR NPGGLL A+ D FLN+G IVST+ R + +
Sbjct 209 -DLQAAIKDIQSKIPTDKLKGYVLDLRLNPGGLLDQAISVTDAFLNKGEIVSTRGRKQND 267
Query 277 -QQFQALPSSEFLRLKMGILINHRSASAAEVFTAAMKDHQRAWVIGEKSYGKGVVQKLFP 335
+F A + +LIN SASA+E+ A++DH+RA +IG +S+GKG VQ + P
Sbjct 268 VMRFDAKLGDLTDEKPIIVLINGGSASASEIVAGALQDHRRATIIGTQSFGKGSVQTIIP 327
Query 336 LPDGSALQMTVSHYYTPDGSMIEGKGIQPN--QRYPLPADMK 375
L + AL++T + YYTP G+ I+G GI P+ PLP K
Sbjct 328 LGENGALRLTTALYYTPSGTSIQGIGITPDIVVEQPLPEKYK 369
Score = 19.2 bits (38), Expect = 6.0
Identities = 8/22 (36%), Positives = 14/22 (64%), Gaps = 0/22 (0%)
Query 257 ADLFLNQGIIVSTKSRSEGNQQ 278
A +FL+ +IV +S + N+Q
Sbjct 10 AGVFLSASLIVMAQSITTNNEQ 31
>Q4L6D0 Probable CtpA-like serine protease [Staphylococcus haemolyticus
(strain JCSC1435)]
Length=496
Score = 162 bits (410), Expect = 3e-48
Identities = 101/332 (30%), Positives = 177/332 (53%), Gaps = 16/332 (5%)
Query 49 ESIQQFVQIYNLVKDNYVEAKSDDALFQQAIKGLVSGL-DRYSRYLSPEDYKQLVQYTEG 107
+ I++ Y + ++Y + ++ L + AI G+V L D YS Y++ ++ K + G
Sbjct 74 QEIKKIEYAYKTLNNDYYKKQNAGKLSEAAIDGMVKELKDPYSEYMTKDETKSFNEDVSG 133
Query 108 DLASVDFALVYDARIHQWVVRDLKEGADSYKLGLRNGQNVLKIDGQDLQTLNHDQVHTLL 167
D + + + Q ++ + + + K G++ V K+DG+ + DQV L+
Sbjct 134 DFVGIGAEM--QKKDKQIMITSPMKDSPAEKAGIQPKDVVTKVDGKSVVGKPLDQVVKLV 191
Query 168 YGSIGTPIQI------QTAEMPVSQTLIRNKKIEADVQPILLHNQVLVLKVKVFQQDTAN 221
G GT +++ Q E+ + + I K +E + + + V + FQ +TA
Sbjct 192 RGKEGTTVKLTIKRGSQEKEIKIKRGKIHVKSVEYKKK-----DNIGVFTINKFQDNTAG 246
Query 222 EIKRLLEEYGSPRLKAVIIDLRNNPGGLLSAAVESADLFLNQGIIVSTKSRSEGNQQFQA 281
E+K + + ++++++DLRNNPGGLL AV+ A++F+++ V + + + +
Sbjct 247 ELKSAIIKAHKDGVRSIVLDLRNNPGGLLDEAVKMANIFIDKDQTVVKLEKGDDTESIKT 306
Query 282 L--PSSEFLRLKMGILINHRSASAAEVFTAAMKDHQRAWVIGEKSYGKGVVQKLFPLPDG 339
S+E +K+ IL+N SASA+EVFT AM+DH++A V G K++GKG+VQ DG
Sbjct 307 SNDASNEAKDMKVSILVNEGSASASEVFTGAMRDHKKAKVYGSKTFGKGIVQTTREFKDG 366
Query 340 SALQMTVSHYYTPDGSMIEGKGIQPNQRYPLP 371
S L+ T + TPDG I GKGIQP+ + P
Sbjct 367 SLLKYTQMKWLTPDGHNIHGKGIQPDTKIASP 398
>Q2YXZ9 Probable CtpA-like serine protease [Staphylococcus aureus
(strain bovine RF122 / ET3-1)]
Length=496
Score = 161 bits (408), Expect = 6e-48
Identities = 101/326 (31%), Positives = 170/326 (52%), Gaps = 6/326 (2%)
Query 50 SIQQFVQIYNLVKDNYVEAKSDDALFQQAIKGLVSGL-DRYSRYLSPEDYKQLVQYTEGD 108
++ + +Y ++ +Y + +S D L + AI G+V L D YS YL+ E K + GD
Sbjct 75 NLNKIENVYKILNSDYYKKQSSDKLSKAAIDGMVKELKDPYSEYLTKEQTKSFNEGVSGD 134
Query 109 LASVDFALVYDARIHQWVVRDLKEGADSYKLGLRNGQNVLKIDGQDLQTLNHDQVHTLLY 168
+ + + Q +V +G+ + + G+R + K++G+ ++ D+V +
Sbjct 135 FVGIGAEM--QKKNDQIMVTSPMKGSPAERAGIRPKDVITKVNGKSIKGKALDEVVKDVR 192
Query 169 GSIGTPIQIQTAEMPVSQTL-IRNKKIEADVQPILLHNQVLVLKVKVFQQDTANEIKRLL 227
G T + + + + I+ +KI +V V+ + FQ DT+ E+K +
Sbjct 193 GKENTEVTLTVQRGSEEKDVKIKREKIHVKSVEYKKKGKVGVITINKFQNDTSGELKDAV 252
Query 228 EEYGSPRLKAVIIDLRNNPGGLLSAAVESADLFLNQGIIVSTKSRSEGNQQFQALPSS-- 285
+ LK +++DLRNNPGGLL AV+ A++F+++G V + + + Q +
Sbjct 253 LKAHKDGLKKIVLDLRNNPGGLLDEAVKMANIFIDKGKTVVKLEKGKDTEAIQTSNDALK 312
Query 286 EFLRLKMGILINHRSASAAEVFTAAMKDHQRAWVIGEKSYGKGVVQKLFPLPDGSALQMT 345
E + + IL+N SASA+EVFT A+KD+ +A V G K++GKGVVQ DGS L+ T
Sbjct 313 EAKDMDISILVNEGSASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYT 372
Query 346 VSHYYTPDGSMIEGKGIQPNQRYPLP 371
+ TPDG I GKGI+P+ P
Sbjct 373 EMKWLTPDGHYIHGKGIKPDVTIDTP 398
>Q7A5M9 Probable CtpA-like serine protease [Staphylococcus aureus
(strain N315)]
Length=496
Score = 161 bits (407), Expect = 9e-48
Identities = 101/326 (31%), Positives = 169/326 (52%), Gaps = 6/326 (2%)
Query 50 SIQQFVQIYNLVKDNYVEAKSDDALFQQAIKGLVSGL-DRYSRYLSPEDYKQLVQYTEGD 108
++ + +Y ++ +Y + + D L + AI G+V L D YS YL+ E K + GD
Sbjct 75 NLNKIENVYKILNSDYYKKQDSDKLSKAAIDGMVKELKDPYSEYLTKEQTKSFNEGVSGD 134
Query 109 LASVDFALVYDARIHQWVVRDLKEGADSYKLGLRNGQNVLKIDGQDLQTLNHDQVHTLLY 168
+ + + Q +V +G+ + + G+R + K++G+ ++ D+V +
Sbjct 135 FVGIGAEM--QKKNDQIMVTSPMKGSPAERAGIRPKDVITKVNGKSIKGKALDEVVKDVR 192
Query 169 GSIGTPIQIQTAEMPVSQTL-IRNKKIEADVQPILLHNQVLVLKVKVFQQDTANEIKRLL 227
G T + + + + I+ +KI +V V+ + FQ DT+ E+K +
Sbjct 193 GKENTEVTLTVQRGSEEKDVKIKREKIHVKSVDYKKKGKVGVITINKFQNDTSGELKDAV 252
Query 228 EEYGSPRLKAVIIDLRNNPGGLLSAAVESADLFLNQGIIVSTKSRSEGNQQFQALPSS-- 285
+ LK +++DLRNNPGGLL AV+ A++F+++G V + + + Q S
Sbjct 253 LKAHKDGLKKIVLDLRNNPGGLLDEAVKMANIFIDKGKTVVKLEKGKDTEAIQTSNDSLK 312
Query 286 EFLRLKMGILINHRSASAAEVFTAAMKDHQRAWVIGEKSYGKGVVQKLFPLPDGSALQMT 345
E + + IL+N SASA+EVFT A+KD+ +A V G K++GKGVVQ DGS L+ T
Sbjct 313 EAKDMDISILVNEGSASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYT 372
Query 346 VSHYYTPDGSMIEGKGIQPNQRYPLP 371
+ TPDG I GKGI+P+ P
Sbjct 373 EMKWLTPDGHYIHGKGIKPDVTIDTP 398
>Q99U67 Probable CtpA-like serine protease [Staphylococcus aureus
(strain Mu50 / ATCC 700699)]
Length=496
Score = 161 bits (407), Expect = 9e-48
Identities = 101/326 (31%), Positives = 169/326 (52%), Gaps = 6/326 (2%)
Query 50 SIQQFVQIYNLVKDNYVEAKSDDALFQQAIKGLVSGL-DRYSRYLSPEDYKQLVQYTEGD 108
++ + +Y ++ +Y + + D L + AI G+V L D YS YL+ E K + GD
Sbjct 75 NLNKIENVYKILNSDYYKKQDSDKLSKAAIDGMVKELKDPYSEYLTKEQTKSFNEGVSGD 134
Query 109 LASVDFALVYDARIHQWVVRDLKEGADSYKLGLRNGQNVLKIDGQDLQTLNHDQVHTLLY 168
+ + + Q +V +G+ + + G+R + K++G+ ++ D+V +
Sbjct 135 FVGIGAEM--QKKNDQIMVTSPMKGSPAERAGIRPKDVITKVNGKSIKGKALDEVVKDVR 192
Query 169 GSIGTPIQIQTAEMPVSQTL-IRNKKIEADVQPILLHNQVLVLKVKVFQQDTANEIKRLL 227
G T + + + + I+ +KI +V V+ + FQ DT+ E+K +
Sbjct 193 GKENTEVTLTVQRGSEEKDVKIKREKIHVKSVDYKKKGKVGVITINKFQNDTSGELKDAV 252
Query 228 EEYGSPRLKAVIIDLRNNPGGLLSAAVESADLFLNQGIIVSTKSRSEGNQQFQALPSS-- 285
+ LK +++DLRNNPGGLL AV+ A++F+++G V + + + Q S
Sbjct 253 LKAHKDGLKKIVLDLRNNPGGLLDEAVKMANIFIDKGKTVVKLEKGKDTEAIQTSNDSLK 312
Query 286 EFLRLKMGILINHRSASAAEVFTAAMKDHQRAWVIGEKSYGKGVVQKLFPLPDGSALQMT 345
E + + IL+N SASA+EVFT A+KD+ +A V G K++GKGVVQ DGS L+ T
Sbjct 313 EAKDMDISILVNEGSASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYT 372
Query 346 VSHYYTPDGSMIEGKGIQPNQRYPLP 371
+ TPDG I GKGI+P+ P
Sbjct 373 EMKWLTPDGHYIHGKGIKPDVTIDTP 398
>Q5HPB7 Probable CtpA-like serine protease [Staphylococcus epidermidis
(strain ATCC 35984 / RP62A)]
Length=491
Score = 160 bits (405), Expect = 2e-47
Identities = 105/333 (32%), Positives = 176/333 (53%), Gaps = 20/333 (6%)
Query 50 SIQQFVQIYNLVKDNYVEAKSDDALFQQAIKGLVSGL-DRYSRYLSPEDYKQLVQYTEGD 108
++++ +Y + +Y + +S D L Q AI G+V L D YS Y++ E+ KQ + GD
Sbjct 70 NLKKIEYVYQTLNKDYYKKQSSDKLTQSAIDGMVKELKDPYSEYMTAEETKQFNEGVSGD 129
Query 109 LASVDFALVYDARIHQWVVRDLKEGADSYKLGLRNGQNVLKIDGQDLQTLNHDQVHTLLY 168
+ + + Q V + + + K G++ V +++ + DQV ++
Sbjct 130 FVGIGAEM--QKKNEQISVTSPMKDSPAEKAGIQPKDIVTQVNHHSVVGKPLDQVVKMVR 187
Query 169 GSIGTPIQI------QTAEMPVSQTLIRNKKIEADVQPILLHNQVLVLKVKVFQQDTANE 222
G GT + + Q ++ + + I K +E + + V VL + FQ +T+ E
Sbjct 188 GKKGTYVTLTIKRGSQEKDIKIKRDTIHVKSVEYEKK-----GNVGVLTINKFQSNTSGE 242
Query 223 IKRLLEEYGSPRLKAVIIDLRNNPGGLLSAAVESADLFLNQGIIV----STKSRSEGNQQ 278
+K + + ++ +I+DLRNNPGGLL AV+ A++F+++G V K + E
Sbjct 243 LKSAIIKAHKQGIRHIILDLRNNPGGLLDEAVKMANIFIDKGNTVVQLEKGKDKEELKTS 302
Query 279 FQALPSSEFLRLKMGILINHRSASAAEVFTAAMKDHQRAWVIGEKSYGKGVVQKLFPLPD 338
QAL ++ +K+ IL+N SASA+EVFT AMKD+ +A V G K++GKG+VQ + D
Sbjct 303 NQALKQAK--DMKVSILVNEGSASASEVFTGAMKDYHKAKVYGSKTFGKGIVQTIREFSD 360
Query 339 GSALQMTVSHYYTPDGSMIEGKGIQPNQRYPLP 371
GS ++ T + TPDG I GKGI+P+ P
Sbjct 361 GSLIKYTEMKWLTPDGHYIHGKGIRPDVSISTP 393
>Q6GGY8 Probable CtpA-like serine protease [Staphylococcus aureus
(strain MRSA252)]
Length=496
Score = 160 bits (405), Expect = 2e-47
Identities = 100/326 (31%), Positives = 170/326 (52%), Gaps = 6/326 (2%)
Query 50 SIQQFVQIYNLVKDNYVEAKSDDALFQQAIKGLVSGL-DRYSRYLSPEDYKQLVQYTEGD 108
++ + +Y ++ +Y + ++ D L + AI G+V L D YS YL+ E K + GD
Sbjct 75 NLNKIENVYKILNSDYYKKQNSDKLSKAAIDGMVKELKDPYSEYLTKEQTKSFNEGVSGD 134
Query 109 LASVDFALVYDARIHQWVVRDLKEGADSYKLGLRNGQNVLKIDGQDLQTLNHDQVHTLLY 168
+ + + Q +V +G+ + + G+R + K++G+ ++ D+V +
Sbjct 135 FVGIGAEM--QKKNDQIMVTSPMKGSPAERAGIRPKDVITKVNGKSIKGKALDEVVKDVR 192
Query 169 GSIGTPIQIQTAEMPVSQTL-IRNKKIEADVQPILLHNQVLVLKVKVFQQDTANEIKRLL 227
G T + + + + I+ +KI +V V+ + FQ DT+ E+K +
Sbjct 193 GKENTEVTLTVQRGSEEKDVKIKREKIHVKSVEYKKKGKVGVITINKFQNDTSGELKDAV 252
Query 228 EEYGSPRLKAVIIDLRNNPGGLLSAAVESADLFLNQGIIVSTKSRSEGNQQFQALPSS-- 285
+ LK +++DLRNNPGGLL AV+ A++F+++G V + + + Q +
Sbjct 253 LKAHKDGLKKIVLDLRNNPGGLLDEAVKMANIFIDKGKTVVKLEKGKDTEAIQTSNDALK 312
Query 286 EFLRLKMGILINHRSASAAEVFTAAMKDHQRAWVIGEKSYGKGVVQKLFPLPDGSALQMT 345
E + + IL+N SASA+EVFT A+KD+ +A V G K++GKGVVQ DGS L+ T
Sbjct 313 EAKDMDISILVNEGSASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYT 372
Query 346 VSHYYTPDGSMIEGKGIQPNQRYPLP 371
+ TPDG I GKGI+P+ P
Sbjct 373 EMKWLTPDGHYIHGKGIKPDVTIDTP 398
>Q8NWR2 Probable CtpA-like serine protease [Staphylococcus aureus
(strain MW2)]
Length=496
Score = 160 bits (404), Expect = 2e-47
Identities = 100/326 (31%), Positives = 169/326 (52%), Gaps = 6/326 (2%)
Query 50 SIQQFVQIYNLVKDNYVEAKSDDALFQQAIKGLVSGL-DRYSRYLSPEDYKQLVQYTEGD 108
++ + +Y ++ +Y + + D L + AI G+V L D YS YL+ E K + GD
Sbjct 75 NLNKIENVYKILNSDYYKKQDSDKLSKAAIDGMVKELKDPYSEYLTKEQTKSFNEGVSGD 134
Query 109 LASVDFALVYDARIHQWVVRDLKEGADSYKLGLRNGQNVLKIDGQDLQTLNHDQVHTLLY 168
+ + + Q +V +G+ + + G+R + K++G+ ++ D+V +
Sbjct 135 FVGIGAEM--QKKNDQIMVTSPMKGSPAERAGIRPKDVITKVNGKSIKGKALDEVVKDVR 192
Query 169 GSIGTPIQIQTAEMPVSQTL-IRNKKIEADVQPILLHNQVLVLKVKVFQQDTANEIKRLL 227
G T + + + + I+ +KI +V V+ + FQ DT+ E+K +
Sbjct 193 GKENTEVTLTVQRGSEEKDVKIKREKIHVKSVEYKKKGKVGVITINKFQNDTSGELKDAV 252
Query 228 EEYGSPRLKAVIIDLRNNPGGLLSAAVESADLFLNQGIIVSTKSRSEGNQQFQALPSS-- 285
+ LK +++DLRNNPGGLL AV+ A++F+++G V + + + Q +
Sbjct 253 LKAHKDGLKKIVLDLRNNPGGLLDEAVKMANIFIDKGKTVVKLEKGKDTEAIQTSNDALK 312
Query 286 EFLRLKMGILINHRSASAAEVFTAAMKDHQRAWVIGEKSYGKGVVQKLFPLPDGSALQMT 345
E + + IL+N SASA+EVFT A+KD+ +A V G K++GKGVVQ DGS L+ T
Sbjct 313 EAKDMDISILVNEGSASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYT 372
Query 346 VSHYYTPDGSMIEGKGIQPNQRYPLP 371
+ TPDG I GKGI+P+ P
Sbjct 373 EMKWLTPDGHYIHGKGIKPDVTIDTP 398
>Q6G9E1 Probable CtpA-like serine protease [Staphylococcus aureus
(strain MSSA476)]
Length=496
Score = 160 bits (404), Expect = 2e-47
Identities = 100/326 (31%), Positives = 169/326 (52%), Gaps = 6/326 (2%)
Query 50 SIQQFVQIYNLVKDNYVEAKSDDALFQQAIKGLVSGL-DRYSRYLSPEDYKQLVQYTEGD 108
++ + +Y ++ +Y + + D L + AI G+V L D YS YL+ E K + GD
Sbjct 75 NLNKIENVYKILNSDYYKKQDSDKLSKAAIDGMVKELKDPYSEYLTKEQTKSFNEGVSGD 134
Query 109 LASVDFALVYDARIHQWVVRDLKEGADSYKLGLRNGQNVLKIDGQDLQTLNHDQVHTLLY 168
+ + + Q +V +G+ + + G+R + K++G+ ++ D+V +
Sbjct 135 FVGIGAEM--QKKNDQIMVTSPMKGSPAERAGIRPKDVITKVNGKSIKGKALDEVVKDVR 192
Query 169 GSIGTPIQIQTAEMPVSQTL-IRNKKIEADVQPILLHNQVLVLKVKVFQQDTANEIKRLL 227
G T + + + + I+ +KI +V V+ + FQ DT+ E+K +
Sbjct 193 GKENTEVTLTVQRGSEEKDVKIKREKIHVKSVEYKKKGKVGVITINKFQNDTSGELKDAV 252
Query 228 EEYGSPRLKAVIIDLRNNPGGLLSAAVESADLFLNQGIIVSTKSRSEGNQQFQALPSS-- 285
+ LK +++DLRNNPGGLL AV+ A++F+++G V + + + Q +
Sbjct 253 LKAHKDGLKKIVLDLRNNPGGLLDEAVKMANIFIDKGKTVVKLEKGKDTEAIQTSNDALK 312
Query 286 EFLRLKMGILINHRSASAAEVFTAAMKDHQRAWVIGEKSYGKGVVQKLFPLPDGSALQMT 345
E + + IL+N SASA+EVFT A+KD+ +A V G K++GKGVVQ DGS L+ T
Sbjct 313 EAKDMDISILVNEGSASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYT 372
Query 346 VSHYYTPDGSMIEGKGIQPNQRYPLP 371
+ TPDG I GKGI+P+ P
Sbjct 373 EMKWLTPDGHYIHGKGIKPDVTIDTP 398
>Q5HG01 Probable CtpA-like serine protease [Staphylococcus aureus
(strain COL)]
Length=496
Score = 160 bits (404), Expect = 2e-47
Identities = 100/326 (31%), Positives = 169/326 (52%), Gaps = 6/326 (2%)
Query 50 SIQQFVQIYNLVKDNYVEAKSDDALFQQAIKGLVSGL-DRYSRYLSPEDYKQLVQYTEGD 108
++ + +Y ++ +Y + + D L + AI G+V L D YS YL+ E K + GD
Sbjct 75 NLNKIENVYKILNSDYYKKQDSDKLSKAAIDGMVKELKDPYSEYLTKEQTKSFNEGVSGD 134
Query 109 LASVDFALVYDARIHQWVVRDLKEGADSYKLGLRNGQNVLKIDGQDLQTLNHDQVHTLLY 168
+ + + Q +V +G+ + + G+R + K++G+ ++ D+V +
Sbjct 135 FVGIGAEM--QKKNDQIMVTSPMKGSPAERAGIRPKDVITKVNGKSIKGKALDEVVKDVR 192
Query 169 GSIGTPIQIQTAEMPVSQTL-IRNKKIEADVQPILLHNQVLVLKVKVFQQDTANEIKRLL 227
G T + + + + I+ +KI +V V+ + FQ DT+ E+K +
Sbjct 193 GKENTEVTLTVQRGSEEKDVKIKREKIHVKSVEYKKKGKVGVITINKFQNDTSGELKDAV 252
Query 228 EEYGSPRLKAVIIDLRNNPGGLLSAAVESADLFLNQGIIVSTKSRSEGNQQFQALPSS-- 285
+ LK +++DLRNNPGGLL AV+ A++F+++G V + + + Q +
Sbjct 253 LKAHKDGLKKIVLDLRNNPGGLLDEAVKMANIFIDKGKTVVKLEKGKDTEAIQTSNDALK 312
Query 286 EFLRLKMGILINHRSASAAEVFTAAMKDHQRAWVIGEKSYGKGVVQKLFPLPDGSALQMT 345
E + + IL+N SASA+EVFT A+KD+ +A V G K++GKGVVQ DGS L+ T
Sbjct 313 EAKDMDISILVNEGSASASEVFTGALKDYNKAKVYGSKTFGKGVVQTTREFKDGSLLKYT 372
Query 346 VSHYYTPDGSMIEGKGIQPNQRYPLP 371
+ TPDG I GKGI+P+ P
Sbjct 373 EMKWLTPDGHYIHGKGIKPDVTIDTP 398
>Q8CSK8 Probable CtpA-like serine protease [Staphylococcus epidermidis
(strain ATCC 12228 / FDA PCI 1200)]
Length=491
Score = 159 bits (402), Expect = 4e-47
Identities = 105/333 (32%), Positives = 175/333 (53%), Gaps = 20/333 (6%)
Query 50 SIQQFVQIYNLVKDNYVEAKSDDALFQQAIKGLVSGL-DRYSRYLSPEDYKQLVQYTEGD 108
++++ +Y + +Y + +S D L Q AI G+V L D YS Y++ E+ KQ + GD
Sbjct 70 NLKKIEYVYQTLNKDYYKKQSSDKLTQSAIDGMVKELKDPYSEYMTAEETKQFNEGVSGD 129
Query 109 LASVDFALVYDARIHQWVVRDLKEGADSYKLGLRNGQNVLKIDGQDLQTLNHDQVHTLLY 168
+ + + Q V + + + K G++ V +++ + DQV ++
Sbjct 130 FVGIGAEM--QKKNEQISVTSPMKDSPAEKAGIQPKDIVTQVNHHSVVGKPLDQVVKMVR 187
Query 169 GSIGTPIQI------QTAEMPVSQTLIRNKKIEADVQPILLHNQVLVLKVKVFQQDTANE 222
G GT + + Q ++ + + I K +E + + V VL + FQ +T+ E
Sbjct 188 GKKGTYVTLTIKRGSQEKDIKIKRDTIHVKSVEYEKK-----GNVGVLTINKFQSNTSGE 242
Query 223 IKRLLEEYGSPRLKAVIIDLRNNPGGLLSAAVESADLFLNQGIIV----STKSRSEGNQQ 278
+K + + ++ +I+DLRNNPGGLL AV+ A++F+++G V K + E
Sbjct 243 LKSAIIKAHKQGIRHIILDLRNNPGGLLDEAVKMANIFIDKGNTVVQLEKGKDKEELKTS 302
Query 279 FQALPSSEFLRLKMGILINHRSASAAEVFTAAMKDHQRAWVIGEKSYGKGVVQKLFPLPD 338
QAL ++ +K+ IL+N SASA+EVFT AMKD+ +A V G K++GKG+VQ D
Sbjct 303 NQALKQAK--DMKVSILVNEGSASASEVFTGAMKDYHKAKVYGSKTFGKGIVQTTREFSD 360
Query 339 GSALQMTVSHYYTPDGSMIEGKGIQPNQRYPLP 371
GS ++ T + TPDG I GKGI+P+ P
Sbjct 361 GSLIKYTEMKWLTPDGHYIHGKGIRPDVSISTP 393
>Q49XN1 Probable CtpA-like serine protease [Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229
/ NCIMB 8711 / NCTC 7292 / S-41)]
Length=491
Score = 147 bits (372), Expect = 7e-43
Identities = 95/328 (29%), Positives = 166/328 (51%), Gaps = 6/328 (2%)
Query 49 ESIQQFVQIYNLVKDNYVEAKSDDALFQQAIKGLVSGLDR-YSRYLSPEDYKQLVQYTEG 107
+ +++ Q+Y + D Y + S + L AI G+V LD YS Y++ ++ K + G
Sbjct 69 DEMKKVEQVYQTLDDEYYKDTSSEELGTAAIDGMVKKLDDPYSDYMTKKETKSFNEDVSG 128
Query 108 DLASVDFALVYDARIHQWVVRDLKEGADSYKLGLRNGQNVLKIDGQDLQTLNHDQVHTLL 167
D + + + +Q + + + + K G++ V K++G+ ++ + + +
Sbjct 129 DFVGIGAEM--QKKGNQIQITSPMKQSPAEKAGIQPKDVVTKVNGKSIKGQPLEAIVKKV 186
Query 168 YGSIGTPIQIQTAEMPVSQTL-IRNKKIEADVQPILLHNQVLVLKVKVFQQDTANEIKRL 226
G GT + + + + I+ KI H V V + FQ T+ E+K
Sbjct 187 RGKQGTKVTLTIERGGQAHDITIKRDKIHVKSVEYQKHGDVGVFTINKFQNSTSGELKSA 246
Query 227 LEEYGSPRLKAVIIDLRNNPGGLLSAAVESADLFLNQGIIVSTKSRSEGNQQFQAL--PS 284
+ + ++ +++DLRNNPGGLL AV+ A++F+++ V + + + +A S
Sbjct 247 IIKAHKDGIRKIVLDLRNNPGGLLDEAVKMANIFIDKNETVVQLEKGKHKEAIKASNDAS 306
Query 285 SEFLRLKMGILINHRSASAAEVFTAAMKDHQRAWVIGEKSYGKGVVQKLFPLPDGSALQM 344
E + + IL+N SASA+EVFT AMKD+ +A V G K++GKG+VQ DGS L+
Sbjct 307 KEAKDMDVSILVNKGSASASEVFTGAMKDYNKAKVYGSKTFGKGIVQTTREFEDGSLLKF 366
Query 345 TVSHYYTPDGSMIEGKGIQPNQRYPLPA 372
T + TP I GKGI P+++ PA
Sbjct 367 TNMKWLTPKSHYIHGKGITPDKKIEEPA 394
>Q55669 Carboxyl-terminal-processing protease [Synechocystis sp.
(strain PCC 6803 / Kazusa)]
Length=427
Score = 144 bits (364), Expect = 4e-42
Identities = 93/298 (31%), Positives = 154/298 (52%), Gaps = 10/298 (3%)
Query 78 AIKGLVSGLDR-YSRYLSPEDYKQLVQYTEGDLASVDFALVYDARIHQWVVRDLKEGADS 136
AI+ +++ LD ++R L PE Y L T G+L+ V + + +Q + G+ +
Sbjct 81 AIEEMLATLDEPFTRLLRPEQYGNLQVTTTGELSGVGLQININPETNQLEIMAPLAGSPA 140
Query 137 YKLGLRNGQNVLKIDGQDLQTLNHDQVHTLLYGSIGTPIQIQT----AEMPVSQTLIRN- 191
+ GL+ +L IDG D QTL+ D+ + G T + ++ E+P TL R
Sbjct 141 EEAGLQPHDQILAIDGVDTQTLSLDEAAARMRGPKNTKVSLEILSAGTEVPQEFTLTRQL 200
Query 192 ---KKIEADVQPILLHNQVLVLKVKVFQQDTANEIKRLLEEYGSPRLKAVIIDLRNNPGG 248
+ A + V +++ F + E+ L + I+DLRNNPGG
Sbjct 201 ISLSPVAAQLDDSRPGQSVGYIRLSQFSANAYKEVAHALHQLEEQGADGYILDLRNNPGG 260
Query 249 LLSAAVESADLFLNQGIIVSTKSRSEGNQQFQALPSSEFLRLKMGILINHRSASAAEVFT 308
LL A ++ A L+L + IV T +R + F A + R + +L+N +ASA+E+
Sbjct 261 LLQAGIDIARLWLPESTIVYTVNRQGTQESFTANGEAATDR-PLVVLVNQGTASASEILA 319
Query 309 AAMKDHQRAWVIGEKSYGKGVVQKLFPLPDGSALQMTVSHYYTPDGSMIEGKGIQPNQ 366
A++D+QRA ++GEK++GKG++Q LF L DG+ + +TV+ Y TP I GI P++
Sbjct 320 GALQDNQRATLVGEKTFGKGLIQSLFELSDGAGIAVTVAKYETPQHHDIHKLGIMPDE 377
Score = 22.3 bits (46), Expect = 0.66
Identities = 31/114 (27%), Positives = 46/114 (40%), Gaps = 31/114 (27%)
Query 45 EVPVESIQQFVQIYNLVKDNYVEAKSDDALFQQAIKGLVSGLDRYSRYLSPEDYKQLVQY 104
EVP Q+F L+ + V A+ DD+ Q++ G R S++ S YK++
Sbjct 189 EVP----QEFTLTRQLISLSPVAAQLDDSRPGQSV-----GYIRLSQF-SANAYKEVAH- 237
Query 105 TEGDLASVDFALVYDARIHQWVVRDLKEGADSYKLGLRNGQNVLKIDGQDLQTL 158
+HQ ++GAD Y L LRN L G D+ L
Sbjct 238 ----------------ALHQLE----EQGADGYILDLRNNPGGLLQAGIDIARL 271
Score = 20.4 bits (41), Expect = 2.6
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 0/36 (0%)
Query 290 LKMGILINHRSASAAEVFTAAMKDHQRAWVIGEKSY 325
L MG LI + +A FT K ++W + +SY
Sbjct 15 LLMGALIYLGNTPSALAFTEEQKLLLQSWRLVNQSY 50
>O34666 Carboxy-terminal processing protease CtpA [Bacillus subtilis
(strain 168)]
Length=466
Score = 143 bits (360), Expect = 3e-41
Identities = 92/347 (27%), Positives = 167/347 (48%), Gaps = 12/347 (3%)
Query 43 SAEVPVESIQQFVQIYNLVKDNYVEAKSDDALFQQAIKGLVSGLDR-YSRYLSPEDYKQL 101
SA + + Y +K +Y + DD L AIKG++ LD YS Y+ E K
Sbjct 36 SASTGDSKFDKLNKAYEQIKSDYYQKTDDDKLVDGAIKGMIQSLDDPYSTYMDQEQAKSF 95
Query 102 VQYTEGDLASVDFALVYDARIHQWVVRDLKEGADSYKLGLRNGQNVLKIDGQDLQTLNHD 161
+ + A V + +V +K G+ + K G++ ++K++G+ ++ +N +
Sbjct 96 DETISASFEGIG-AQVEEKDGEILIVSPIK-GSPAEKAGIKPRDQIIKVNGKSVKGMNVN 153
Query 162 QVHTLLYGSIGTPIQIQTAEMPVSQTLIRNKKIEADVQPI---LLHNQVLVLKVKVFQQD 218
+ L+ G GT ++++ V + K+ V+ + + N + +++ F +
Sbjct 154 EAVALIRGKKGTKVKLELNRAGVGNIDLSIKRDTIPVETVYSEMKDNNIGEIQITSFSET 213
Query 219 TANEIKRLLEEYGSPRLKAVIIDLRNNPGGLLSAAVESADLFLNQGIIVSTKSRSEGNQQ 278
TA E+ ++ K I+DLR NPGGL+ A+ ++LF+++G + G+++
Sbjct 214 TAKELTDAIDSLEKKGAKGYILDLRGNPGGLMEQAITMSNLFIDKGKNIMQVEYKNGSKE 273
Query 279 FQALPSSEFLRLKMGILINHRSASAAEVFTAAMKDHQRAWVIGEKSYGKGVVQKLFPLPD 338
+ +L+N +ASAAE+ AA+ + +IGE ++GKG VQ D
Sbjct 274 VMKAEKERKVTKPTVVLVNDGTASAAEIMAAALHESSNVPLIGETTFGKGTVQTAKEYDD 333
Query 339 GSALQMTVSHYYTPDGSMIEGKGIQPNQRYPLPADMK------DETY 379
GS +++TV+ + T DG I KGI+P + LP K D+TY
Sbjct 334 GSTVKLTVAKWLTADGEWIHKKGIKPQVKAELPDYAKLPYLDADKTY 380
>P42784 Carboxyl-terminal-processing protease [Synechococcus sp.
(strain ATCC 27264 / PCC 7002 / PR-6)]
Length=414
Score = 137 bits (345), Expect = 1e-39
Identities = 98/321 (31%), Positives = 163/321 (51%), Gaps = 17/321 (5%)
Query 87 DRYSRYLSPEDYKQLVQYTEGDLASVDFALVYDARIHQWVVRDLKEGADSYKLGLRNGQN 146
D Y+R L PE Y+ L T G+L+ V + + + V G+ + G+
Sbjct 89 DPYTRLLRPEQYRSLKVSTSGELSGVGLQINVNPEVDVLEVILPLPGSPAEAAGIEAKDQ 148
Query 147 VLKIDGQDLQTLNHDQVHTLLYGSIGTPIQIQTAEMPVSQTLIRNKKIEAD---VQPILL 203
+L IDG D + + ++ + G G+ + + T + P + T +R K+ D + P+
Sbjct 149 ILAIDGIDTRNIGLEEAAARMRGKKGSTVSL-TVKSPKTDT-VRTVKVTRDTIALNPVYD 206
Query 204 H------NQVLVLKVKVFQQDTANEIKRLLEEYGSPRLKAVIIDLRNNPGGLLSAAVESA 257
+V +++ F + EI + L + ++DLRNNPGGLL A +E A
Sbjct 207 KLDEKNGEKVGYIRLNQFSANAKTEIIKSLNQLQKQGADRYVLDLRNNPGGLLQAGIEIA 266
Query 258 DLFLNQGIIVSTKSRSEGNQQFQALPSSEFLRLKMGILINHRSASAAEVFTAAMKDHQRA 317
L+L+Q IV T +R + + A+ + +L+N +ASA+E+ A++D+ RA
Sbjct 267 RLWLDQETIVYTVNRQGIFESYSAV-GQPLTDAPLVVLVNQATASASEILAGALQDNGRA 325
Query 318 WVIGEKSYGKGVVQKLFPLPDGSALQMTVSHYYTPDGSMIEGKGIQPNQRYPLP----AD 373
++GEK++GKG++Q LF LPDG+ + +TV+ Y TP I GI P++ P A
Sbjct 326 MLVGEKTFGKGLIQSLFELPDGAGMAVTVAKYETPLHHDINKLGIMPDEVVPQEPIGYAM 385
Query 374 MKDETYLENVADL-LLKQPKS 393
M ET L+ A L LL Q ++
Sbjct 386 MGSETDLQYQAALDLLTQDQA 406
>O35002 Carboxy-terminal processing protease CtpB [Bacillus subtilis
(strain 168)]
Length=480
Score = 117 bits (294), Expect = 4e-32
Identities = 86/335 (26%), Positives = 163/335 (49%), Gaps = 32/335 (10%)
Query 49 ESIQQFVQIYNLVKDNYVEAKSDDALFQQAIKGLVSGL-DRYSRYLSPEDYKQLVQYTEG 107
+++ + + Y L+ + YVE + L + AI+G++S L D YS Y+ + KQ +
Sbjct 50 KAMDKIEKAYELISNEYVEKVDREKLLEGAIQGMLSTLNDPYSVYMDKQTAKQFSDSLDS 109
Query 108 DLASVDFAL-VYDARIHQWVVRDLKEGADSYKLGLRNGQNVLKIDGQDL--QTLNHD--Q 162
+ + + D +I +V K+ + + K GL+ ++ I+G+ + + LNH +
Sbjct 110 SFEGIGAEVGMEDGKII--IVSPFKK-SPAEKAGLKPNDEIISINGESMAGKDLNHAVLK 166
Query 163 VHTLLYGSIGTPIQ-----------IQTAEMPVSQTLIRNKKIEADVQPILLHNQVLVLK 211
+ S+ IQ I+ AE+P+ KK++ + V +
Sbjct 167 IRGKKGSSVSMKIQRPGTKKQLSFRIKRAEIPLETVFASEKKVQG--------HSVGYIA 218
Query 212 VKVFQQDTANEIKRLLEEYGSPRLKAVIIDLRNNPGGLLSAAVESADLFL--NQGIIVST 269
+ F + TA + + L E ++ ++ID+R NPGG L + E F+ +Q I
Sbjct 219 ISTFSEHTAEDFAKALRELEKKEIEGLVIDVRGNPGGYLQSVEEILKHFVTKDQPYIQIA 278
Query 270 KSRSEGNQQFQALPSSEFLRLKMGILINHRSASAAEVFTAAMKDHQRAWVIGEKSYGKGV 329
+ + + F L + + ++ + SASA+E+ A+K+ V+G+ S+GKG
Sbjct 279 ERNGDKKRYFSTLTHKK--AYPVNVITDKGSASASEILAGALKEAGHYDVVGDTSFGKGT 336
Query 330 VQKLFPLPDGSALQMTVSHYYTPDGSMIEGKGIQP 364
VQ+ P+ DGS +++T+ + TP+G+ I KGI+P
Sbjct 337 VQQAVPMGDGSNIKLTLYKWLTPNGNWIHKKGIEP 371
>O04073 C-terminal processing peptidase, chloroplastic [Tetradesmus
obliquus]
Length=464
Score = 115 bits (289), Expect = 2e-31
Identities = 91/341 (27%), Positives = 160/341 (47%), Gaps = 27/341 (8%)
Query 61 VKDNYVEAKSDDALFQ--QAIKGLVSGLDR-YSRYLSPEDYKQLVQYTEGDLASVDFALV 117
+++ Y++ + D Q AI+ L++ LD ++R+L P L + T G + V +
Sbjct 109 LRETYLKKEPMDRRAQTYDAIRKLLAVLDDPFTRFLEPSRLAALRRGTAGSVTGVGLEIT 168
Query 118 YDARIHQ-WVVRDLKEGADSYKLGLRNGQNVLKIDGQDLQTLNHDQVHTLLYGSI----- 171
YD + VV G + K G R G ++ +DG ++ L+ V LL G
Sbjct 169 YDGGSGKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGLSLYDVSDLLQGEADSQVE 228
Query 172 ------GTPIQIQTAEM--------PVSQTLIRNKKIEADVQPILLHNQVLVLKVKVFQQ 217
G P +T ++ PV+ T N A + P Q+ +++ F
Sbjct 229 VVLHAPGAPSNTRTLQLTRQKVTINPVTFTTCSNVAAAA-LPPGAAKQQLGYVRLATFNS 287
Query 218 DTANEIKRLLEEYGSPRLKAVIIDLRNNPGGLLSAAVESADLFLNQGIIVSTKSRSEGNQ 277
+T ++ E + +++D+RNN GGL A V A + +++G +V
Sbjct 288 NTTAAAQQAFTELSKQGVAGLVLDIRNNGGGLFPAGVNVARMLVDRGDLVLIADSQGIRD 347
Query 278 QFQALPSSEFLRLKMGILINHRSASAAEVFTAAMKDHQRAWVIGEKSYGKGVVQKLFPLP 337
+ A +S + +L+N +ASA+EV A+KD +R + GE+++GKG++Q + L
Sbjct 348 IYSADGNSIDSATPLVVLVNRGTASASEVLAGALKDSKRGLIAGERTFGKGLIQTVVDLS 407
Query 338 DGSALQMTVSHYYTPDGSMIEGKGIQPNQRYP---LPADMK 375
DGS + +TV+ Y TP G I G+ P+ + LP D++
Sbjct 408 DGSGVAVTVARYQTPAGVDINKIGVSPDVQLDPEVLPTDLE 448
>P23865 Tail-specific protease [Escherichia coli (strain K12)]
Length=682
Score = 97.1 bits (240), Expect = 1e-24
Identities = 83/338 (25%), Positives = 154/338 (46%), Gaps = 35/338 (10%)
Query 58 YNLVKDNYVEAKSDDALFQQAIKGLVSGLDRYSRYLSPEDYKQLVQYTEGDLASVDFALV 117
Y + S+D +F A+ +D ++ YLSP + +Q TE L+ V
Sbjct 195 YKFAIRRLAQTNSED-VFSLAMTAFAREIDPHTNYLSPRNTEQF--NTEMSLSLEGIGAV 251
Query 118 YDARIHQWVVRDLKEGADSYKL-GLRNGQNVLKIDGQ------DLQTLNHDQVHTLLYGS 170
V+ + G + K + G ++ + GQ D+ D V L+ G
Sbjct 252 LQMDDDYTVINSMVAGGPAAKSKAISVGDKIVGV-GQTGKPMVDVIGWRLDDVVALIKGP 310
Query 171 IGTPIQIQ-----------TAEMPVSQTLIRNKKIEADVQPILLHNQVLVLKVKVFQQDT 219
G+ ++++ T + + + ++ ++ V+ + +V VL + F
Sbjct 311 KGSKVRLEILPAGKGTKTRTVTLTRERIRLEDRAVKMSVKTVG-KEKVGVLDIPGFYVGL 369
Query 220 ANEIKRLLEEYGSPRLKAVIIDLRNNPGGLLSAAVESADLFLNQGIIVSTKSRSEGNQQF 279
+++K L++ + +VIIDLR+N GG L+ AV + LF+ G IV + + ++
Sbjct 370 TDDVKVQLQKLEKQNVSSVIIDLRSNGGGALTEAVSLSGLFIPAGPIVQVRDNNGKVRED 429
Query 280 QALPSSEFLRLKMGILINHRSASAAEVFTAAMKDHQRAWVIGEKSYGKGVVQKLFPL--- 336
F + + +L++ SASA+E+F AAM+D+ RA V+GE ++GKG VQ+ L
Sbjct 430 SDTDGQVFYKGPLVVLVDRFSASASEIFAAAMQDYGRALVVGEPTFGKGTVQQYRSLNRI 489
Query 337 ---------PDGSALQMTVSHYYTPDGSMIEGKGIQPN 365
P ++Q T+ +Y +G + KG+ P+
Sbjct 490 YDQMLRPEWPALGSVQYTIQKFYRVNGGSTQRKGVTPD 527
>P43669 Tail-specific protease [Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720)]
Length=682
Score = 94.0 bits (232), Expect = 1e-23
Identities = 82/338 (24%), Positives = 157/338 (46%), Gaps = 35/338 (10%)
Query 58 YNLVKDNYVEAKSDDALFQQAIKGLVSGLDRYSRYLSPEDYKQLVQYTEGDLASVDFALV 117
Y + S+D +F A+ +D ++ YLSP + +Q TE L+ V
Sbjct 195 YKFAIRRLAQTNSED-VFSLAMTAFAREIDPHTNYLSPRNTEQF--NTEMSLSLEGIGAV 251
Query 118 YDARIHQWVVRDLKEGADSYKL-GLRNGQNVLKIDGQ------DLQTLNHDQVHTLLYGS 170
V+ L G + K + G ++ + GQ D+ D V L+ G
Sbjct 252 LQMDDDYTVINSLVAGGPAAKSKSISVGDRIVGV-GQAGKPMVDVIGWRLDDVVALIKGP 310
Query 171 IGTPIQIQ---------TAEMPVSQTLIR--NKKIEADVQPILLHNQVLVLKVKVFQQDT 219
G+ ++++ T + +++ IR ++ ++ V+ + +V VL + F
Sbjct 311 KGSKVRLEILPAGKGTKTRIITLTRERIRLEDRAVKMSVKTVG-KEKVGVLDIPGFYVGL 369
Query 220 ANEIKRLLEEYGSPRLKAVIIDLRNNPGGLLSAAVESADLFLNQGIIVSTKSRSEGNQQF 279
+++K L++ + +++IDLR+N GG L+ AV + LF+ G IV + + ++
Sbjct 370 TDDVKVQLQKLEKQNVNSIVIDLRSNGGGALTEAVSLSGLFIPSGPIVQVRDNNGKVRED 429
Query 280 QALPSSEFLRLKMGILINHRSASAAEVFTAAMKDHQRAWVIGEKSYGKGVVQKLFPL--- 336
+ + + +L++ SASA+E+F AAM+D+ RA ++GE ++GKG VQ+ L
Sbjct 430 SDTDGVVYYKGPLVVLVDRFSASASEIFAAAMQDYGRALIVGEPTFGKGTVQQYRSLNRI 489
Query 337 ---------PDGSALQMTVSHYYTPDGSMIEGKGIQPN 365
P ++Q T+ +Y +G + KG+ P+
Sbjct 490 YDQMLRPEWPALGSVQYTIQKFYRVNGGSTQRKGVTPD 527
>Q7SZI7 Retinol-binding protein 3 [Xenopus laevis]
Length=1219
Score = 49.3 bits (116), Expect = 3e-09
Identities = 61/247 (25%), Positives = 108/247 (44%), Gaps = 30/247 (12%)
Query 129 DLKEGADSYKLGLRNGQNVLKIDGQDLQTLNHDQVHTLLYGSIGTPIQIQTAEMPVSQTL 188
+L+ + +L L++ + L + G +Q N + +L + T ++ +P +
Sbjct 369 ELQSLTEDPRLVLKSKTDTLVMPGDSIQAENIPEDEAMLQALVNTVFKVSI--LPGNIGY 426
Query 189 IRNKKIEADVQPILLHNQVLVLKVKVFQQDTANEIKRLLEEYGSPRLKAVIIDLRNNPGG 248
+R + ADV ++ K+ F +T E + E +IIDLR N GG
Sbjct 427 LRFDQF-ADVS--------VIAKLAPFIVNTVWEPITITEN--------LIIDLRYNVGG 469
Query 249 LLSAAVESADLFLNQG--IIVSTKSRSEGNQQFQALPSSEFLRLKMG------ILINHRS 300
+A FL+ I + T + N + + L G +L +H++
Sbjct 470 SSTAVPLLLSYFLDPETKIHLFTLHNRQQNSTDEVYSHPKVLGKPYGSKKGVYVLTSHQT 529
Query 301 ASAAEVFTAAMKDHQRAWVIGEKSYGKGVVQKLFPLPDGSALQMTVS--HYYTPDGSMIE 358
A+AAE F M+ RA +IGE + G + K+FP DG+ L +TV ++ +G
Sbjct 530 ATAAEEFAYLMQSLSRATIIGEITSGNLMHSKVFPF-DGTQLSVTVPIINFIDSNGDYWL 588
Query 359 GKGIQPN 365
G G+ P+
Sbjct 589 GGGVVPD 595
Score = 42.7 bits (99), Expect = 3e-07
Identities = 43/143 (30%), Positives = 68/143 (48%), Gaps = 18/143 (13%)
Query 237 AVIIDLRNNPGGLLSAAVESADLF-----LNQGIIVSTKSRSEGNQQFQALPSSEFLRLK 291
++IID+R N GG +A F L V +S S G + LP E +
Sbjct 756 SLIIDMRYNTGGYSTAIPIFCSYFFDPEPLQHLYTVYDRSTSTG-KDIWTLP--EVFGER 812
Query 292 MG------ILINHRSASAAEVFTAAMKDHQRAWVIGEKSYGKGVVQKLFPLPDGSALQMT 345
G IL +H + SAAEVFT ++KD RA +IGE + G + ++ + D S L +T
Sbjct 813 YGSTKDIYILTSHMTGSAAEVFTRSLKDLNRATLIGEPTSGVSLSVGMYKVGD-SNLYVT 871
Query 346 VSHYY---TPDGSMIEGKGIQPN 365
+ + + G + G++P+
Sbjct 872 IPNQVVISSVTGKVWSVSGVEPH 894
Score = 37.0 bits (84), Expect = 2e-05
Identities = 46/187 (25%), Positives = 79/187 (42%), Gaps = 21/187 (11%)
Query 218 DTANEIKRLLEEYGSPRL---KAVIIDLRNNPGGLLSAAVESADLFLNQG--IIVSTKSR 272
D N++ LL E+ ++ A+IID+R N GG S+ F ++G +++
Sbjct 1035 DLLNQVSDLLVEHVWKKVVDQDALIIDMRFNIGGPTSSIPIFCSYFFDEGTPVLLDKIYS 1094
Query 273 SEGNQQFQALPSSEFLRLKMG------ILINHRSASAAEVFTAAMKDHQRAWVIGEKSYG 326
N + + G IL + + AAE F MK RA+V+GE + G
Sbjct 1095 RTSNAMTDIWTLPDLVGKTFGSKKPLIILTSSLTEGAAEEFVYIMKRLGRAYVVGEVTSG 1154
Query 327 KGVVQKLFPLPDGSALQMTVSHYYTPD---GSMIEGKGIQPNQRYPLPADMKDETYLENV 383
+ + + D + L +T+ + G EGKG+ P+ ++ ET L
Sbjct 1155 GCHPPQTYHV-DDTHLYLTIPTSRSASAEPGESWEGKGVLPD------LEISSETALLKA 1207
Query 384 ADLLLKQ 390
++L Q
Sbjct 1208 KEILESQ 1214
Score = 24.6 bits (52), Expect = 0.14
Identities = 31/136 (23%), Positives = 53/136 (39%), Gaps = 8/136 (6%)
Query 237 AVIIDLRNNPGGLLSAAVESADLFLNQGIIVSTKSRSEGNQQFQALPSSEFLRLKMG--- 293
A+I+DLR + G +S + I + + N E + + G
Sbjct 162 ALILDLRYSTQGEVSGIPFVVSYLCDSEIHIDSIYNRPSNTTTDLWTLPELMGERYGKVK 221
Query 294 ---ILINHRSASAAEVFTAAMKDHQRAWVIGEKSYGKGV-VQKLFPLPDGSALQMTVSHY 349
+L + + AE + +K RA V+GEK+ G + QK+ + + VS
Sbjct 222 DVVVLTSKYTKGVAEDASYILKHMNRAIVVGEKTAGGSLDTQKIKIGQSDFYITVPVSRS 281
Query 350 YTP-DGSMIEGKGIQP 364
+P G E G+ P
Sbjct 282 LSPLTGQSWEVSGVSP 297
>P12661 Retinol-binding protein 3 [Bos taurus]
Length=1286
Score = 42.7 bits (99), Expect = 3e-07
Identities = 52/186 (28%), Positives = 82/186 (44%), Gaps = 16/186 (9%)
Query 202 LLHNQVLVLKVKVFQQ-DTANEIKRLLEEYGSPRL---KAVIIDLRNNPGGLLSAAVESA 257
+L V L+ +F + ++ LL E+ ++ A+I+D+R N GG S+
Sbjct 1035 VLEGNVGYLRFDMFGDCELLTQVSELLVEHVWKKIVHTDALIVDMRFNIGGPTSSISALC 1094
Query 258 DLFLNQGI-IVSTKSRSEGNQQFQALPSSEFL-------RLKMGILINHRSASAAEVFTA 309
F ++G I+ K + N L + L + M IL + +A AAE FT
Sbjct 1095 SYFFDEGPPILLDKIYNRPNNSVSELWTLSQLEGERYGSKKSMVILTSTLTAGAAEEFTY 1154
Query 310 AMKDHQRAWVIGEKSYGKGVVQKLFPLPDGSALQMTV---SHYYTPDGSMIEGKGIQPNQ 366
MK RA VIGE + G + + + D + L +T+ DGS EG G+ P+
Sbjct 1155 IMKRLGRALVIGEVTSGGCQPPQTYHV-DDTDLYLTIPTARSVGAADGSSWEGVGVVPDV 1213
Query 367 RYPLPA 372
P A
Sbjct 1214 AVPAEA 1219
Score = 41.2 bits (95), Expect = 1e-06
Identities = 39/145 (27%), Positives = 64/145 (44%), Gaps = 12/145 (8%)
Query 237 AVIIDLRNNPGGLLSAAVESADLFLN---QGIIVSTKSRSEGN-QQFQALPSSEFLRL-- 290
A+++DLR NPG +A F + + S R+ + LP R
Sbjct 775 ALVVDLRYNPGSYSTAVPLLCSYFFEAEPRRHLYSVFDRATSRVTEVWTLPHVTGQRYGS 834
Query 291 --KMGILINHRSASAAEVFTAAMKDHQRAWVIGEKSYGKGVVQKLFPLPDGSALQMTVSH 348
+ +L++H S SAAE F M+D QRA +IGE + G + ++ + SAL ++
Sbjct 835 HKDLYVLVSHTSGSAAEAFAHTMQDLQRATIIGEPTAGGALSVGIYQV-GSSALYASMPT 893
Query 349 YYTPDGSMIEG---KGIQPNQRYPL 370
S E G++P+ P+
Sbjct 894 QMAMSASTGEAWDLAGVEPDITVPM 918
Score = 34.3 bits (77), Expect = 1e-04
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 20/203 (10%)
Query 181 EMPVSQTLIRNKKIEADVQPILLHNQVLVLKVKVFQQDTANEI--KRLLEEYGSPR--LK 236
E+P + +R +++ Q +L V L+ F + E+ +L + P +
Sbjct 412 EVPEDEA-VRRALVDSVFQVSVLPGNVGYLRFDSFADASVLEVLGPYILHQVWEPLQDTE 470
Query 237 AVIIDLRNNPGGLLSAAVESADLFLNQGI----IVSTKSRSEGNQQFQALPSSEFLRLKM 292
+I+DLR NPGG SA F + + ST R N + +E L
Sbjct 471 HLIMDLRQNPGGPSSAVPLLLSYFQSPDASPVRLFSTYDRRT-NITREHFSQTELLGRPY 529
Query 293 G------ILINHRSASAAEVFTAAMKDHQRAWVIGEKSYGKGV---VQKLFPLPDGS-AL 342
G +L +HR+A+AAE M+ A ++GE + G + L P+G AL
Sbjct 530 GTQRGVYLLTSHRTATAAEELAFLMQSLGWATLVGEITAGSLLHTHTVSLLETPEGGLAL 589
Query 343 QMTVSHYYTPDGSMIEGKGIQPN 365
+ V + G G G+ P+
Sbjct 590 TVPVLTFIDNHGECWLGGGVVPD 612
Score = 31.6 bits (70), Expect = 0.001
Identities = 40/141 (28%), Positives = 62/141 (44%), Gaps = 14/141 (10%)
Query 237 AVIIDLRNNPGGLLSAAVESADLFLNQGIIVS---TKSRSEGNQQFQALPSSEFLRLKMG 293
A+++DLR+ GG +S + +L+ G VS T N + E L K
Sbjct 164 ALVLDLRHCTGGHVS-GIPYVISYLHPGSTVSHVDTVYDRPSNTTTEIWTLPEALGEKYS 222
Query 294 ------ILINHRSASAAEVFTAAMKDHQRAWVIGEKSYGKGV-VQKLFPLPDGSALQMTV 346
+L + R+ AE +K +RA V+GE++ G + +QKL L + V
Sbjct 223 ADKDVVVLTSSRTGGVAEDIAYILKQMRRAIVVGERTVGGALNLQKLRVGQSDFFLTVPV 282
Query 347 SHYYTP--DGSMI-EGKGIQP 364
S P +GS EG G+ P
Sbjct 283 SRSLGPLGEGSQTWEGSGVLP 303
Lambda K H a alpha
0.318 0.135 0.382 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 3692740
Database: 5f48924e200d666a2f80a7f4360aa091.SwissProt.fasta
Posted date: May 20, 2024 2:32 PM
Number of letters in database: 11,995
Number of sequences in database: 21
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
