BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 5d727b81d1650e7af41550f4f86bf4d4.TrEMBL.fasta
24 sequences; 7,149 total letters
Query= ACIAD0266
Length=306
Score E
Sequences producing significant alignments: (Bits) Value
Q6FFC6 Tyrosine recombinase XerD [Acinetobacter baylyi (strain AT... 610 0.0
A0A7G2SA86 Tyrosine recombinase XerD [Acinetobacter sp] 608 0.0
A0A3R9GGT7 Tyrosine recombinase XerD [Acinetobacter soli] 546 0.0
A0A0M1I6V4 Tyrosine recombinase XerD [Acinetobacter sp. C15] 546 0.0
A0A1P8ELR3 Tyrosine recombinase XerD [Acinetobacter soli] 545 0.0
N9AK59 Tyrosine recombinase XerD [Acinetobacter soli NIPH 2899] 544 0.0
N8Q1R3 Tyrosine recombinase XerD [Acinetobacter parvus NIPH 1103] 534 0.0
N8XCE7 Tyrosine recombinase XerD [Acinetobacter sp. CIP 102637] 533 0.0
N8VQC1 Tyrosine recombinase XerD [Acinetobacter sp. CIP 102129] 533 0.0
N8W618 Tyrosine recombinase XerD [Acinetobacter sp. CIP 102529] 531 0.0
N9TU19 Tyrosine recombinase XerD [Acinetobacter sp. CIP 102143] 531 0.0
A0A3N4SYQ7 Tyrosine recombinase XerD [Acinetobacter sp. BIGb0102] 531 0.0
N8RPQ1 Tyrosine recombinase XerD [Acinetobacter parvus DSM 16617 ... 531 0.0
N8WJ63 Tyrosine recombinase XerD [Acinetobacter sp. CIP 102082] 531 0.0
Q5IV19 Tyrosine recombinase XerD [Pseudomonas fluorescens] 284 6e-99
B5APJ2 Transposase [Sphingobacterium sp. (strain PM2-P1-29)] 132 8e-40
Q93L48 TpnF protein [Bacteroides thetaiotaomicron] 129 1e-38
A0A077EIP2 Integron integrase [Elizabethkingia anophelis NUHP1] 114 4e-33
A0A077ELZ7 Integron integrase [Elizabethkingia anophelis NUHP1] 112 3e-32
Q9HIM5 Tyrosine recombinase XerA [Thermoplasma acidophilum (strai... 109 3e-31
A0A4P6YBS3 Integrase [Flavobacterium nackdongense] 107 1e-30
Q8CM99 ISSod25 integrase Int_ISSod25 [Shewanella oneidensis (stra... 104 2e-29
B7T9W3 Phage integrase [uncultured bacterium] 97.1 1e-26
O68847 Integron integrase [Vibrio cholerae] 95.9 5e-26
>Q6FFC6 Tyrosine recombinase XerD [Acinetobacter baylyi (strain
ATCC 33305 / BD413 / ADP1)]
Length=305
Score = 610 bits (1572), Expect = 0.0
Identities = 305/305 (100%), Positives = 305/305 (100%), Gaps = 0/305 (0%)
Query 1 MVSKKPRIPAPVTIPEQFSFLQGFRDYLVAQSVSPHTRNAYLSDLIQCAQLVVVPLPQWS 60
MVSKKPRIPAPVTIPEQFSFLQGFRDYLVAQSVSPHTRNAYLSDLIQCAQLVVVPLPQWS
Sbjct 1 MVSKKPRIPAPVTIPEQFSFLQGFRDYLVAQSVSPHTRNAYLSDLIQCAQLVVVPLPQWS 60
Query 61 SETISDVLIELTKTGKSPRSIARSLSALRQFFKFLREQKIRDDNPVALHKSPKLGRTLPK 120
SETISDVLIELTKTGKSPRSIARSLSALRQFFKFLREQKIRDDNPVALHKSPKLGRTLPK
Sbjct 61 SETISDVLIELTKTGKSPRSIARSLSALRQFFKFLREQKIRDDNPVALHKSPKLGRTLPK 120
Query 121 DLSEQDVEALIHAPDTNTALGLRDRAMLEVLYACGLRVSELLNLRLELINLKQGYLRITG 180
DLSEQDVEALIHAPDTNTALGLRDRAMLEVLYACGLRVSELLNLRLELINLKQGYLRITG
Sbjct 121 DLSEQDVEALIHAPDTNTALGLRDRAMLEVLYACGLRVSELLNLRLELINLKQGYLRITG 180
Query 181 KGNKERLVPLGQMATDWIERYLVESRPQLYKSHTDYLFLTQHGGIMSRQNFWYAIKRYAL 240
KGNKERLVPLGQMATDWIERYLVESRPQLYKSHTDYLFLTQHGGIMSRQNFWYAIKRYAL
Sbjct 181 KGNKERLVPLGQMATDWIERYLVESRPQLYKSHTDYLFLTQHGGIMSRQNFWYAIKRYAL 240
Query 241 QANILPEMSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAQIRMQQLHEK 300
QANILPEMSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAQIRMQQLHEK
Sbjct 241 QANILPEMSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAQIRMQQLHEK 300
Query 301 YHPRG 305
YHPRG
Sbjct 301 YHPRG 305
>A0A7G2SA86 Tyrosine recombinase XerD [Acinetobacter sp]
Length=305
Score = 608 bits (1567), Expect = 0.0
Identities = 304/305 (99%), Positives = 304/305 (99%), Gaps = 0/305 (0%)
Query 1 MVSKKPRIPAPVTIPEQFSFLQGFRDYLVAQSVSPHTRNAYLSDLIQCAQLVVVPLPQWS 60
MVSKKPRIPAPVTIPEQF FLQGFRDYLVAQSVSPHTRNAYLSDLIQCAQLVVVPLPQWS
Sbjct 1 MVSKKPRIPAPVTIPEQFRFLQGFRDYLVAQSVSPHTRNAYLSDLIQCAQLVVVPLPQWS 60
Query 61 SETISDVLIELTKTGKSPRSIARSLSALRQFFKFLREQKIRDDNPVALHKSPKLGRTLPK 120
SETISDVLIELTKTGKSPRSIARSLSALRQFFKFLREQKIRDDNPVALHKSPKLGRTLPK
Sbjct 61 SETISDVLIELTKTGKSPRSIARSLSALRQFFKFLREQKIRDDNPVALHKSPKLGRTLPK 120
Query 121 DLSEQDVEALIHAPDTNTALGLRDRAMLEVLYACGLRVSELLNLRLELINLKQGYLRITG 180
DLSEQDVEALIHAPDTNTALGLRDRAMLEVLYACGLRVSELLNLRLELINLKQGYLRITG
Sbjct 121 DLSEQDVEALIHAPDTNTALGLRDRAMLEVLYACGLRVSELLNLRLELINLKQGYLRITG 180
Query 181 KGNKERLVPLGQMATDWIERYLVESRPQLYKSHTDYLFLTQHGGIMSRQNFWYAIKRYAL 240
KGNKERLVPLGQMATDWIERYLVESRPQLYKSHTDYLFLTQHGGIMSRQNFWYAIKRYAL
Sbjct 181 KGNKERLVPLGQMATDWIERYLVESRPQLYKSHTDYLFLTQHGGIMSRQNFWYAIKRYAL 240
Query 241 QANILPEMSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAQIRMQQLHEK 300
QANILPEMSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAQIRMQQLHEK
Sbjct 241 QANILPEMSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAQIRMQQLHEK 300
Query 301 YHPRG 305
YHPRG
Sbjct 301 YHPRG 305
>A0A3R9GGT7 Tyrosine recombinase XerD [Acinetobacter soli]
Length=305
Score = 546 bits (1406), Expect = 0.0
Identities = 271/304 (89%), Positives = 287/304 (94%), Gaps = 0/304 (0%)
Query 1 MVSKKPRIPAPVTIPEQFSFLQGFRDYLVAQSVSPHTRNAYLSDLIQCAQLVVVPLPQWS 60
M+SKKPR PAP+TIP+ FSFL GFRDYLVAQSVSPHTRNAYLSDLIQCAQL LP+WS
Sbjct 1 MISKKPRTPAPITIPKPFSFLHGFRDYLVAQSVSPHTRNAYLSDLIQCAQLSRHALPEWS 60
Query 61 SETISDVLIELTKTGKSPRSIARSLSALRQFFKFLREQKIRDDNPVALHKSPKLGRTLPK 120
++ ISDVLIELTK GKSPRSIAR LSALRQF+KFLREQKIR DNPVALHKSPKLGR+LP+
Sbjct 61 ADDISDVLIELTKLGKSPRSIARCLSALRQFYKFLREQKIRTDNPVALHKSPKLGRSLPQ 120
Query 121 DLSEQDVEALIHAPDTNTALGLRDRAMLEVLYACGLRVSELLNLRLELINLKQGYLRITG 180
DLSEQDV+ALIHAPDT+TALGLRDRAMLEVLYACGLRVSELLNL+LELINLKQGYLRITG
Sbjct 121 DLSEQDVDALIHAPDTSTALGLRDRAMLEVLYACGLRVSELLNLKLELINLKQGYLRITG 180
Query 181 KGNKERLVPLGQMATDWIERYLVESRPQLYKSHTDYLFLTQHGGIMSRQNFWYAIKRYAL 240
KGNKERLVPLGQ AT+W+ERYL ESRP LYKS TDYLFLTQHGGIMSRQNFWYAIKRYAL
Sbjct 181 KGNKERLVPLGQFATEWVERYLRESRPALYKSATDYLFLTQHGGIMSRQNFWYAIKRYAL 240
Query 241 QANILPEMSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAQIRMQQLHEK 300
QANI E+SPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAQIRMQQLHE+
Sbjct 241 QANIQMELSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAQIRMQQLHEQ 300
Query 301 YHPR 304
YHPR
Sbjct 301 YHPR 304
>A0A0M1I6V4 Tyrosine recombinase XerD [Acinetobacter sp. C15]
Length=305
Score = 546 bits (1406), Expect = 0.0
Identities = 271/304 (89%), Positives = 287/304 (94%), Gaps = 0/304 (0%)
Query 1 MVSKKPRIPAPVTIPEQFSFLQGFRDYLVAQSVSPHTRNAYLSDLIQCAQLVVVPLPQWS 60
M+SKKPR PAP+TIP+ FSFL GFRDYLVAQSVSPHTRNAYLSDLIQCAQL LP+WS
Sbjct 1 MISKKPRTPAPITIPKPFSFLHGFRDYLVAQSVSPHTRNAYLSDLIQCAQLSRHALPEWS 60
Query 61 SETISDVLIELTKTGKSPRSIARSLSALRQFFKFLREQKIRDDNPVALHKSPKLGRTLPK 120
++ ISDVLIELTK GKSPRSIAR LSALRQF+KFLREQKIR DNPVALHKSPKLGR+LP+
Sbjct 61 ADDISDVLIELTKLGKSPRSIARCLSALRQFYKFLREQKIRTDNPVALHKSPKLGRSLPQ 120
Query 121 DLSEQDVEALIHAPDTNTALGLRDRAMLEVLYACGLRVSELLNLRLELINLKQGYLRITG 180
DLSEQDV+ALIHAPDT+TALGLRDRAMLEVLYACGLRVSELLNL+LELINLKQGYLRITG
Sbjct 121 DLSEQDVDALIHAPDTSTALGLRDRAMLEVLYACGLRVSELLNLKLELINLKQGYLRITG 180
Query 181 KGNKERLVPLGQMATDWIERYLVESRPQLYKSHTDYLFLTQHGGIMSRQNFWYAIKRYAL 240
KGNKERLVPLGQ AT+W+ERYL ESRP LYKS TDYLFLTQHGGIMSRQNFWYAIKRYAL
Sbjct 181 KGNKERLVPLGQFATEWVERYLRESRPALYKSATDYLFLTQHGGIMSRQNFWYAIKRYAL 240
Query 241 QANILPEMSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAQIRMQQLHEK 300
QANI E+SPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAQIRMQQLHE+
Sbjct 241 QANIQMELSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAQIRMQQLHEQ 300
Query 301 YHPR 304
YHPR
Sbjct 301 YHPR 304
>A0A1P8ELR3 Tyrosine recombinase XerD [Acinetobacter soli]
Length=305
Score = 545 bits (1403), Expect = 0.0
Identities = 271/304 (89%), Positives = 286/304 (94%), Gaps = 0/304 (0%)
Query 1 MVSKKPRIPAPVTIPEQFSFLQGFRDYLVAQSVSPHTRNAYLSDLIQCAQLVVVPLPQWS 60
M+SKKPR PAP+TIP+ FSFL GFRDYLVAQSVSPHTRNAYLSDLIQCAQL LP+WS
Sbjct 1 MISKKPRTPAPITIPKPFSFLHGFRDYLVAQSVSPHTRNAYLSDLIQCAQLSRHALPEWS 60
Query 61 SETISDVLIELTKTGKSPRSIARSLSALRQFFKFLREQKIRDDNPVALHKSPKLGRTLPK 120
++ ISDVLIELTK GKSPRSIAR LSALRQF+KFLREQKIR DNPVALHKSPKLGR+LP+
Sbjct 61 ADDISDVLIELTKLGKSPRSIARCLSALRQFYKFLREQKIRTDNPVALHKSPKLGRSLPQ 120
Query 121 DLSEQDVEALIHAPDTNTALGLRDRAMLEVLYACGLRVSELLNLRLELINLKQGYLRITG 180
DLSEQDV+ALIHAPDT TALGLRDRAMLEVLYACGLRVSELLNL+LELINLKQGYLRITG
Sbjct 121 DLSEQDVDALIHAPDTATALGLRDRAMLEVLYACGLRVSELLNLKLELINLKQGYLRITG 180
Query 181 KGNKERLVPLGQMATDWIERYLVESRPQLYKSHTDYLFLTQHGGIMSRQNFWYAIKRYAL 240
KGNKERLVPLGQ AT+W+ERYL ESRP LYKS TDYLFLTQHGGIMSRQNFWYAIKRYAL
Sbjct 181 KGNKERLVPLGQFATEWVERYLRESRPALYKSATDYLFLTQHGGIMSRQNFWYAIKRYAL 240
Query 241 QANILPEMSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAQIRMQQLHEK 300
QANI E+SPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAQIRMQQLHE+
Sbjct 241 QANIQMELSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAQIRMQQLHEQ 300
Query 301 YHPR 304
YHPR
Sbjct 301 YHPR 304
>N9AK59 Tyrosine recombinase XerD [Acinetobacter soli NIPH 2899]
Length=305
Score = 544 bits (1402), Expect = 0.0
Identities = 270/304 (89%), Positives = 286/304 (94%), Gaps = 0/304 (0%)
Query 1 MVSKKPRIPAPVTIPEQFSFLQGFRDYLVAQSVSPHTRNAYLSDLIQCAQLVVVPLPQWS 60
M+SKKPR PAP+TIP+ FSFL GFRDYLVAQSVSPHTRNAYLSDLIQCAQL LP+WS
Sbjct 1 MISKKPRTPAPITIPKPFSFLHGFRDYLVAQSVSPHTRNAYLSDLIQCAQLSRHALPEWS 60
Query 61 SETISDVLIELTKTGKSPRSIARSLSALRQFFKFLREQKIRDDNPVALHKSPKLGRTLPK 120
++ ISDVLIELTK GKSPRSIAR LSALRQF+KFLREQKIR DNPVALHKSPKLGR+LP+
Sbjct 61 ADDISDVLIELTKLGKSPRSIARCLSALRQFYKFLREQKIRTDNPVALHKSPKLGRSLPQ 120
Query 121 DLSEQDVEALIHAPDTNTALGLRDRAMLEVLYACGLRVSELLNLRLELINLKQGYLRITG 180
DLSEQDV+ LIHAPDT+TALGLRDRAMLEVLYACGLRVSELLNL+LELINLKQGYLRITG
Sbjct 121 DLSEQDVDVLIHAPDTSTALGLRDRAMLEVLYACGLRVSELLNLKLELINLKQGYLRITG 180
Query 181 KGNKERLVPLGQMATDWIERYLVESRPQLYKSHTDYLFLTQHGGIMSRQNFWYAIKRYAL 240
KGNKERLVPLGQ AT+W+ERYL ESRP LYKS TDYLFLTQHGGIMSRQNFWYAIKRYAL
Sbjct 181 KGNKERLVPLGQFATEWVERYLRESRPALYKSATDYLFLTQHGGIMSRQNFWYAIKRYAL 240
Query 241 QANILPEMSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAQIRMQQLHEK 300
QANI E+SPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAQIRMQQLHE+
Sbjct 241 QANIQMELSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAQIRMQQLHEQ 300
Query 301 YHPR 304
YHPR
Sbjct 301 YHPR 304
>N8Q1R3 Tyrosine recombinase XerD [Acinetobacter parvus NIPH 1103]
Length=306
Score = 534 bits (1376), Expect = 0.0
Identities = 266/306 (87%), Positives = 285/306 (93%), Gaps = 1/306 (0%)
Query 1 MVSKKPRIPAPVTIPEQFSFLQGFRDYLVAQSVSPHTRNAYLSDLIQCAQL-VVVPLPQW 59
M++KKPRIP VTIPE SFLQGFRDYLVAQ+VSPHTRNAYLSDLIQC++L V LPQW
Sbjct 1 MLNKKPRIPTAVTIPEHLSFLQGFRDYLVAQTVSPHTRNAYLSDLIQCSELHTSVSLPQW 60
Query 60 SSETISDVLIELTKTGKSPRSIARSLSALRQFFKFLREQKIRDDNPVALHKSPKLGRTLP 119
SS I+DVLI LTK+GKSPRSIAR LSALRQF+KFLREQKIRDDNPVA H+SPK+GR LP
Sbjct 61 SSADIADVLIALTKSGKSPRSIARCLSALRQFYKFLREQKIRDDNPVATHQSPKIGRALP 120
Query 120 KDLSEQDVEALIHAPDTNTALGLRDRAMLEVLYACGLRVSELLNLRLELINLKQGYLRIT 179
KDLSEQDVE+LI+APDTNTALGLRDRAMLEVLYACGLRVSELLNLR+ELINLKQG+LRIT
Sbjct 121 KDLSEQDVESLINAPDTNTALGLRDRAMLEVLYACGLRVSELLNLRMELINLKQGFLRIT 180
Query 180 GKGNKERLVPLGQMATDWIERYLVESRPQLYKSHTDYLFLTQHGGIMSRQNFWYAIKRYA 239
GKGNKERLVPLGQ A DWIE+YL+ESRPQLYKS TDYLFLTQHGGIMSRQNFWYAIKRYA
Sbjct 181 GKGNKERLVPLGQYACDWIEKYLLESRPQLYKSSTDYLFLTQHGGIMSRQNFWYAIKRYA 240
Query 240 LQANILPEMSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAQIRMQQLHE 299
LQANI E+SPHTLRHAFATHLLNHGADLRVVQ+LLGHSDLSTTQIYTHVAQ RMQ+LH
Sbjct 241 LQANIQAELSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAQHRMQELHG 300
Query 300 KYHPRG 305
KYHPRG
Sbjct 301 KYHPRG 306
>N8XCE7 Tyrosine recombinase XerD [Acinetobacter sp. CIP 102637]
Length=306
Score = 533 bits (1374), Expect = 0.0
Identities = 265/306 (87%), Positives = 285/306 (93%), Gaps = 1/306 (0%)
Query 1 MVSKKPRIPAPVTIPEQFSFLQGFRDYLVAQSVSPHTRNAYLSDLIQCAQL-VVVPLPQW 59
M++KKPRIP VTIPE SFLQGFRDYLVAQ+VSPHTRNAYLSDLIQC++L V LPQW
Sbjct 1 MLNKKPRIPTAVTIPEHLSFLQGFRDYLVAQTVSPHTRNAYLSDLIQCSELHTSVSLPQW 60
Query 60 SSETISDVLIELTKTGKSPRSIARSLSALRQFFKFLREQKIRDDNPVALHKSPKLGRTLP 119
SS I+DVLI LTK+GKSPRSIAR LSALRQF+KFLREQK+RDDNPVA H+SPK+GR LP
Sbjct 61 SSADIADVLIALTKSGKSPRSIARCLSALRQFYKFLREQKLRDDNPVATHQSPKIGRALP 120
Query 120 KDLSEQDVEALIHAPDTNTALGLRDRAMLEVLYACGLRVSELLNLRLELINLKQGYLRIT 179
KDLSEQDVE+LI+APDTNTALGLRDRAMLEVLYACGLRVSELLNLR+ELINLKQG+LRIT
Sbjct 121 KDLSEQDVESLINAPDTNTALGLRDRAMLEVLYACGLRVSELLNLRMELINLKQGFLRIT 180
Query 180 GKGNKERLVPLGQMATDWIERYLVESRPQLYKSHTDYLFLTQHGGIMSRQNFWYAIKRYA 239
GKGNKERLVPLGQ A DWIE+YL+ESRPQLYKS TDYLFLTQHGGIMSRQNFWYAIKRYA
Sbjct 181 GKGNKERLVPLGQYACDWIEKYLLESRPQLYKSSTDYLFLTQHGGIMSRQNFWYAIKRYA 240
Query 240 LQANILPEMSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAQIRMQQLHE 299
LQANI E+SPHTLRHAFATHLLNHGADLRVVQ+LLGHSDLSTTQIYTHVAQ RMQ+LH
Sbjct 241 LQANIQAELSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAQHRMQELHG 300
Query 300 KYHPRG 305
KYHPRG
Sbjct 301 KYHPRG 306
>N8VQC1 Tyrosine recombinase XerD [Acinetobacter sp. CIP 102129]
Length=306
Score = 533 bits (1373), Expect = 0.0
Identities = 265/306 (87%), Positives = 285/306 (93%), Gaps = 1/306 (0%)
Query 1 MVSKKPRIPAPVTIPEQFSFLQGFRDYLVAQSVSPHTRNAYLSDLIQCAQL-VVVPLPQW 59
M++KKPRIP VTIPE SFLQGFRDYLVAQ+VSPHTRNAYLSDLIQC++L V LPQW
Sbjct 1 MLNKKPRIPTAVTIPEHLSFLQGFRDYLVAQTVSPHTRNAYLSDLIQCSELHTSVSLPQW 60
Query 60 SSETISDVLIELTKTGKSPRSIARSLSALRQFFKFLREQKIRDDNPVALHKSPKLGRTLP 119
SS+ I+DVLI LTK+GKSPRSIAR LSALRQF+KFLREQKIRDDNPVA H+SPK+GR LP
Sbjct 61 SSDDIADVLIALTKSGKSPRSIARCLSALRQFYKFLREQKIRDDNPVATHQSPKIGRALP 120
Query 120 KDLSEQDVEALIHAPDTNTALGLRDRAMLEVLYACGLRVSELLNLRLELINLKQGYLRIT 179
KDLSEQDVE+LI+APDT+TALGLRDRAMLEVLYACGLRVSELLNLR+ELINLKQG+LRIT
Sbjct 121 KDLSEQDVESLINAPDTDTALGLRDRAMLEVLYACGLRVSELLNLRMELINLKQGFLRIT 180
Query 180 GKGNKERLVPLGQMATDWIERYLVESRPQLYKSHTDYLFLTQHGGIMSRQNFWYAIKRYA 239
GKGNKERLVPLGQ A DWIE+YL ESRPQLYKS TDYLFLTQHGGIMSRQNFWYAIKRYA
Sbjct 181 GKGNKERLVPLGQYACDWIEKYLTESRPQLYKSSTDYLFLTQHGGIMSRQNFWYAIKRYA 240
Query 240 LQANILPEMSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAQIRMQQLHE 299
LQANI E+SPHTLRHAFATHLLNHGADLRVVQ+LLGHSDLSTTQIYTHVAQ RMQ+LH
Sbjct 241 LQANIQAELSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAQHRMQELHG 300
Query 300 KYHPRG 305
KYHPRG
Sbjct 301 KYHPRG 306
>N8W618 Tyrosine recombinase XerD [Acinetobacter sp. CIP 102529]
Length=306
Score = 531 bits (1369), Expect = 0.0
Identities = 264/306 (86%), Positives = 284/306 (93%), Gaps = 1/306 (0%)
Query 1 MVSKKPRIPAPVTIPEQFSFLQGFRDYLVAQSVSPHTRNAYLSDLIQCAQL-VVVPLPQW 59
M++KKPRIP+ V IPE SFLQGFRDYLVAQ+VSPHTRNAYLSDLIQC++L V LPQW
Sbjct 1 MLNKKPRIPSAVNIPEHLSFLQGFRDYLVAQTVSPHTRNAYLSDLIQCSELHTSVSLPQW 60
Query 60 SSETISDVLIELTKTGKSPRSIARSLSALRQFFKFLREQKIRDDNPVALHKSPKLGRTLP 119
SS I+DVLI LTK+GKSPRSIAR LSALRQF+KFLREQK+RDDNPVA H+SPK+GR LP
Sbjct 61 SSADIADVLIALTKSGKSPRSIARCLSALRQFYKFLREQKLRDDNPVATHQSPKIGRALP 120
Query 120 KDLSEQDVEALIHAPDTNTALGLRDRAMLEVLYACGLRVSELLNLRLELINLKQGYLRIT 179
KDLSEQDVE+LI+APDTNTALGLRDRAMLEVLYACGLRVSELLNLR+ELINLKQG+LRIT
Sbjct 121 KDLSEQDVESLINAPDTNTALGLRDRAMLEVLYACGLRVSELLNLRMELINLKQGFLRIT 180
Query 180 GKGNKERLVPLGQMATDWIERYLVESRPQLYKSHTDYLFLTQHGGIMSRQNFWYAIKRYA 239
GKGNKERLVPLGQ A DWIE+YL ESRPQLYKS TDYLFLTQHGGIMSRQNFWYAIKRYA
Sbjct 181 GKGNKERLVPLGQYACDWIEKYLTESRPQLYKSSTDYLFLTQHGGIMSRQNFWYAIKRYA 240
Query 240 LQANILPEMSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAQIRMQQLHE 299
LQANI E+SPHTLRHAFATHLLNHGADLRVVQ+LLGHSDLSTTQIYTHVAQ RMQ+LH
Sbjct 241 LQANIQAELSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAQHRMQELHG 300
Query 300 KYHPRG 305
KYHPRG
Sbjct 301 KYHPRG 306
>N9TU19 Tyrosine recombinase XerD [Acinetobacter sp. CIP 102143]
Length=306
Score = 531 bits (1369), Expect = 0.0
Identities = 264/306 (86%), Positives = 284/306 (93%), Gaps = 1/306 (0%)
Query 1 MVSKKPRIPAPVTIPEQFSFLQGFRDYLVAQSVSPHTRNAYLSDLIQCAQL-VVVPLPQW 59
M++KKPRIP+ V IPE SFLQGFRDYLVAQ+VSPHTRNAYLSDLIQC++L V LPQW
Sbjct 1 MLNKKPRIPSAVNIPEHLSFLQGFRDYLVAQTVSPHTRNAYLSDLIQCSELHTSVSLPQW 60
Query 60 SSETISDVLIELTKTGKSPRSIARSLSALRQFFKFLREQKIRDDNPVALHKSPKLGRTLP 119
SS I+DVLI LTK+GKSPRSIAR LSALRQF+KFLREQK+RDDNPVA H+SPK+GR LP
Sbjct 61 SSADIADVLIALTKSGKSPRSIARCLSALRQFYKFLREQKLRDDNPVATHQSPKIGRALP 120
Query 120 KDLSEQDVEALIHAPDTNTALGLRDRAMLEVLYACGLRVSELLNLRLELINLKQGYLRIT 179
KDLSEQDVE+LI+APDTNTALGLRDRAMLEVLYACGLRVSELLNLR+ELINLKQG+LRIT
Sbjct 121 KDLSEQDVESLINAPDTNTALGLRDRAMLEVLYACGLRVSELLNLRMELINLKQGFLRIT 180
Query 180 GKGNKERLVPLGQMATDWIERYLVESRPQLYKSHTDYLFLTQHGGIMSRQNFWYAIKRYA 239
GKGNKERLVPLGQ A DWIE+YL ESRPQLYKS TDYLFLTQHGGIMSRQNFWYAIKRYA
Sbjct 181 GKGNKERLVPLGQYACDWIEKYLTESRPQLYKSSTDYLFLTQHGGIMSRQNFWYAIKRYA 240
Query 240 LQANILPEMSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAQIRMQQLHE 299
LQANI E+SPHTLRHAFATHLLNHGADLRVVQ+LLGHSDLSTTQIYTHVAQ RMQ+LH
Sbjct 241 LQANIQAELSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAQHRMQELHG 300
Query 300 KYHPRG 305
KYHPRG
Sbjct 301 KYHPRG 306
>A0A3N4SYQ7 Tyrosine recombinase XerD [Acinetobacter sp. BIGb0102]
Length=306
Score = 531 bits (1369), Expect = 0.0
Identities = 264/306 (86%), Positives = 282/306 (92%), Gaps = 1/306 (0%)
Query 1 MVSKKPRIPAPVTIPEQFSFLQGFRDYLVAQSVSPHTRNAYLSDLIQCAQL-VVVPLPQW 59
M++KKPRIPA V IPE FLQGFRDYLVAQ+VSPHTRNAYLSDLIQC++L + LP+W
Sbjct 1 MLNKKPRIPAAVNIPEHLGFLQGFRDYLVAQTVSPHTRNAYLSDLIQCSELHQKIALPEW 60
Query 60 SSETISDVLIELTKTGKSPRSIARSLSALRQFFKFLREQKIRDDNPVALHKSPKLGRTLP 119
SS+ I+DVLI LTK GKSPRSIAR LSALRQF+KFLREQK+RDDNPVA H SPK+GR LP
Sbjct 61 SSDDIADVLIALTKAGKSPRSIARCLSALRQFYKFLREQKLRDDNPVATHHSPKIGRALP 120
Query 120 KDLSEQDVEALIHAPDTNTALGLRDRAMLEVLYACGLRVSELLNLRLELINLKQGYLRIT 179
KDLSEQDVEALI+APDTNTALGLRDRAM EVLYACGLRVSELLNL+LELINLKQGYLRIT
Sbjct 121 KDLSEQDVEALINAPDTNTALGLRDRAMFEVLYACGLRVSELLNLKLELINLKQGYLRIT 180
Query 180 GKGNKERLVPLGQMATDWIERYLVESRPQLYKSHTDYLFLTQHGGIMSRQNFWYAIKRYA 239
GKGNKERLVPLGQ A DWIE+YLVESRPQLYKS TDYLFLTQHGGIMSRQNFWYAIKRYA
Sbjct 181 GKGNKERLVPLGQFACDWIEKYLVESRPQLYKSSTDYLFLTQHGGIMSRQNFWYAIKRYA 240
Query 240 LQANILPEMSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAQIRMQQLHE 299
LQANI E+SPHTLRHAFATHLLNHGADLRVVQ+LLGHSDLSTTQIYTHVAQ RMQ+LH
Sbjct 241 LQANIQAELSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAQHRMQELHG 300
Query 300 KYHPRG 305
KYHPRG
Sbjct 301 KYHPRG 306
>N8RPQ1 Tyrosine recombinase XerD [Acinetobacter parvus DSM 16617
= CIP 108168]
Length=306
Score = 531 bits (1369), Expect = 0.0
Identities = 264/306 (86%), Positives = 284/306 (93%), Gaps = 1/306 (0%)
Query 1 MVSKKPRIPAPVTIPEQFSFLQGFRDYLVAQSVSPHTRNAYLSDLIQCAQL-VVVPLPQW 59
M++KKPRIP+ V IPE SFLQGFRDYLVAQ+VSPHTRNAYLSDLIQC++L V LPQW
Sbjct 1 MLNKKPRIPSAVNIPEHLSFLQGFRDYLVAQTVSPHTRNAYLSDLIQCSELHTSVSLPQW 60
Query 60 SSETISDVLIELTKTGKSPRSIARSLSALRQFFKFLREQKIRDDNPVALHKSPKLGRTLP 119
SS I+DVLI LTK+GKSPRSIAR LSALRQF+KFLREQK+RDDNPVA H+SPK+GR LP
Sbjct 61 SSADIADVLIALTKSGKSPRSIARCLSALRQFYKFLREQKLRDDNPVATHQSPKIGRALP 120
Query 120 KDLSEQDVEALIHAPDTNTALGLRDRAMLEVLYACGLRVSELLNLRLELINLKQGYLRIT 179
KDLSEQDVE+LI+APDTNTALGLRDRAMLEVLYACGLRVSELLNLR+ELINLKQG+LRIT
Sbjct 121 KDLSEQDVESLINAPDTNTALGLRDRAMLEVLYACGLRVSELLNLRMELINLKQGFLRIT 180
Query 180 GKGNKERLVPLGQMATDWIERYLVESRPQLYKSHTDYLFLTQHGGIMSRQNFWYAIKRYA 239
GKGNKERLVPLGQ A DWIE+YL ESRPQLYKS TDYLFLTQHGGIMSRQNFWYAIKRYA
Sbjct 181 GKGNKERLVPLGQYACDWIEKYLTESRPQLYKSSTDYLFLTQHGGIMSRQNFWYAIKRYA 240
Query 240 LQANILPEMSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAQIRMQQLHE 299
LQANI E+SPHTLRHAFATHLLNHGADLRVVQ+LLGHSDLSTTQIYTHVAQ RMQ+LH
Sbjct 241 LQANIQAELSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAQHRMQELHG 300
Query 300 KYHPRG 305
KYHPRG
Sbjct 301 KYHPRG 306
>N8WJ63 Tyrosine recombinase XerD [Acinetobacter sp. CIP 102082]
Length=306
Score = 531 bits (1369), Expect = 0.0
Identities = 264/306 (86%), Positives = 284/306 (93%), Gaps = 1/306 (0%)
Query 1 MVSKKPRIPAPVTIPEQFSFLQGFRDYLVAQSVSPHTRNAYLSDLIQCAQL-VVVPLPQW 59
M++KKPRIP+ V IPE SFLQGFRDYLVAQ+VSPHTRNAYLSDLIQC++L V LPQW
Sbjct 1 MLNKKPRIPSAVNIPEHLSFLQGFRDYLVAQTVSPHTRNAYLSDLIQCSELHTSVSLPQW 60
Query 60 SSETISDVLIELTKTGKSPRSIARSLSALRQFFKFLREQKIRDDNPVALHKSPKLGRTLP 119
SS I+DVLI LTK+GKSPRSIAR LSALRQF+KFLREQK+RDDNPVA H+SPK+GR LP
Sbjct 61 SSADIADVLIALTKSGKSPRSIARCLSALRQFYKFLREQKLRDDNPVATHQSPKIGRALP 120
Query 120 KDLSEQDVEALIHAPDTNTALGLRDRAMLEVLYACGLRVSELLNLRLELINLKQGYLRIT 179
KDLSEQDVE+LI+APDTNTALGLRDRAMLEVLYACGLRVSELLNLR+ELINLKQG+LRIT
Sbjct 121 KDLSEQDVESLINAPDTNTALGLRDRAMLEVLYACGLRVSELLNLRMELINLKQGFLRIT 180
Query 180 GKGNKERLVPLGQMATDWIERYLVESRPQLYKSHTDYLFLTQHGGIMSRQNFWYAIKRYA 239
GKGNKERLVPLGQ A DWIE+YL ESRPQLYKS TDYLFLTQHGGIMSRQNFWYAIKRYA
Sbjct 181 GKGNKERLVPLGQYACDWIEKYLTESRPQLYKSSTDYLFLTQHGGIMSRQNFWYAIKRYA 240
Query 240 LQANILPEMSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAQIRMQQLHE 299
LQANI E+SPHTLRHAFATHLLNHGADLRVVQ+LLGHSDLSTTQIYTHVAQ RMQ+LH
Sbjct 241 LQANIQAELSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAQHRMQELHG 300
Query 300 KYHPRG 305
KYHPRG
Sbjct 301 KYHPRG 306
>Q5IV19 Tyrosine recombinase XerD [Pseudomonas fluorescens]
Length=298
Score = 284 bits (727), Expect = 6e-99
Identities = 155/279 (56%), Positives = 195/279 (70%), Gaps = 4/279 (1%)
Query 31 QSVSPHTRNAYLSDLIQC---AQLVVVPLPQWSSETISDVLIELTKTGKSPRSIARSLSA 87
+ +S +TR+AY SDL Q + L E I D L + PRS AR LS
Sbjct 20 KGLSDNTRDAYRSDLALFNGWLQENHLELINAGRELILDHLAWRLEQNYKPRSTARFLSG 79
Query 88 LRQFFKFLREQKIRDDNPVALHKSPKLGRTLPKDLSEQDVEALIHAPDTNTALGLRDRAM 147
LR F+++L +K+ +P + P+LGR LPK LSE DVEAL+ APD + A+G RDRAM
Sbjct 80 LRGFYRYLLREKLIAVDPTLRVEMPQLGRPLPKSLSEADVEALLAAPDLSEAIGQRDRAM 139
Query 148 LEVLYACGLRVSELLNLRLELINLKQGYLRITGKGNKERLVPLGQMATDWIERYLVESRP 207
LEVLYACGLRV+EL++L LE +NL+QG LR+ GKG+KERLVP+G+ A W+ERY+ ++R
Sbjct 140 LEVLYACGLRVTELISLTLEQVNLRQGVLRVMGKGSKERLVPMGEEAIVWVERYVRDARH 199
Query 208 QLYKSH-TDYLFLTQHGGIMSRQNFWYAIKRYALQANILPEMSPHTLRHAFATHLLNHGA 266
+L +D LF + G M+RQ FW+ IK A A I +SPHTLRHAFATHLLNHGA
Sbjct 200 ELLGGRPSDALFPSLRGEQMTRQTFWHRIKHQAKVAGINKSLSPHTLRHAFATHLLNHGA 259
Query 267 DLRVVQLLLGHSDLSTTQIYTHVAQIRMQQLHEKYHPRG 305
DLRVVQ+LLGHSDLSTTQIYTHVA+ R+Q LH K+HPRG
Sbjct 260 DLRVVQMLLGHSDLSTTQIYTHVARARLQDLHAKHHPRG 298
Score = 18.9 bits (37), Expect = 3.4
Identities = 8/19 (42%), Positives = 15/19 (79%), Gaps = 1/19 (5%)
Query 29 VAQSVSPHT-RNAYLSDLI 46
+ +S+SPHT R+A+ + L+
Sbjct 237 INKSLSPHTLRHAFATHLL 255
>B5APJ2 Transposase [Sphingobacterium sp. (strain PM2-P1-29)]
Length=279
Score = 132 bits (331), Expect = 8e-40
Identities = 89/281 (32%), Positives = 148/281 (53%), Gaps = 21/281 (7%)
Query 21 LQGFRDYLVAQSVSPHTRNAYLSDLIQCAQLVVVPLPQWSSETISDV---LIELTKTGKS 77
L+ F L+ Q + +T +Y D V P +SD+ + E + GK
Sbjct 7 LETFEKRLLMQRYAGNTIRSY-KDYASIFLKHVSKYPSLEEIPLSDIEAFINEKVQNGKI 65
Query 78 PRSIARSL-SALRQFFKFLREQKIRDDNPVALHKSPKLGRTLPKDLSEQDVEALIHAPDT 136
S + L A+++ ++ + ++KI+ D KL PK S+++V ++
Sbjct 66 SVSYQKGLVGAIKKMYELILDKKIQLDYLYPKRSFSKL----PKFFSKEEVRNIL----- 116
Query 137 NTALGLRDRAMLEVLYACGLRVSELLNLRLELINLKQGYLRI-TGKGNKERLVPLGQMAT 195
+ L+ +A+L +Y+CGLR+SELLNL+++ I G +RI KGNK+R+V L
Sbjct 117 DNTQNLKHKAILMTIYSCGLRLSELLNLKIKDIKSSDGIIRIHQSKGNKDRIVSLPDKLL 176
Query 196 DWIERYLVESRPQLYKSHTDYLFLTQHGGIMSRQNFWYAIKRYALQANILPEMSPHTLRH 255
+ Y +P+ +YLF + GG S ++ +K+ ++AN+ E S HTLRH
Sbjct 177 ATLRHYYQAFKPK------EYLFEGEKGGKYSERSVQLILKKALIKANVQSEGSVHTLRH 230
Query 256 AFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAQIRMQQ 296
++ATHL+ G D+R+V+ LLGH ++ TT IYTH+ I Q+
Sbjct 231 SYATHLIQSGIDIRIVKELLGHENIKTTMIYTHITDIDKQK 271
>Q93L48 TpnF protein [Bacteroides thetaiotaomicron]
Length=279
Score = 129 bits (323), Expect = 1e-38
Identities = 88/281 (31%), Positives = 147/281 (52%), Gaps = 21/281 (7%)
Query 21 LQGFRDYLVAQSVSPHTRNAYLSDLIQCAQLVVVPLPQWSSETISDV---LIELTKTGKS 77
L+ F L+ Q + +T +Y D V P +SD+ + E + GK
Sbjct 7 LETFEKRLLMQRYAGNTIRSY-KDYASIFLKHVSKYPSLEEIPLSDIEAFINEKVQNGKI 65
Query 78 PRSIARSL-SALRQFFKFLREQKIRDDNPVALHKSPKLGRTLPKDLSEQDVEALIHAPDT 136
S + L A+++ ++ + ++KI+ D KL PK S+++V ++
Sbjct 66 SVSYQKGLVGAIKKMYELILDKKIQLDYLYPKRSFSKL----PKFFSKEEVRNIL----- 116
Query 137 NTALGLRDRAMLEVLYACGLRVSELLNLRLELINLKQGYLRI-TGKGNKERLVPLGQMAT 195
+ L+ +A+L +Y+CGLR+SELLNL+++ I G +RI KGNK+R+V L
Sbjct 117 DNTQNLKHKAILMTIYSCGLRLSELLNLKIKDIKSSDGIIRIHQSKGNKDRIVSLPDKLL 176
Query 196 DWIERYLVESRPQLYKSHTDYLFLTQHGGIMSRQNFWYAIKRYALQANILPEMSPHTLRH 255
+ Y +P+ +YLF + GG S ++ +K+ ++AN+ E S HT RH
Sbjct 177 ATLRHYYQAFKPK------EYLFEGEKGGKYSERSVQLILKKALIKANVQSEGSVHTGRH 230
Query 256 AFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAQIRMQQ 296
++ATHL+ G D+R+V+ LLGH ++ TT IYTH+ I Q+
Sbjct 231 SYATHLIQSGIDIRIVKELLGHENIKTTMIYTHITDIDKQK 271
>A0A077EIP2 Integron integrase [Elizabethkingia anophelis NUHP1]
Length=286
Score = 114 bits (285), Expect = 4e-33
Identities = 82/247 (33%), Positives = 131/247 (53%), Gaps = 27/247 (11%)
Query 62 ETISDVLIELTKTGKSPRS--IARSLSALRQFFKFLREQKIRDDNPVALHKSPKLGRTLP 119
E I D L L K KSP ++ LR FL + + + ++L + K + LP
Sbjct 42 EQIHDYLFYLQKKSKSPSQSYFKHTVYGLR----FLLKSEGLSYDYLSLPEI-KREKKLP 96
Query 120 KDLSEQDVEALIHAPDTNTALGLRDRAMLEVLYACGLRVSELLNLRLELINLKQGYLRIT 179
LS+Q+V ++ L+ + ++ +LY CGLR E+ NLRL ++ + L++
Sbjct 97 VVLSKQEVWQMLSGCKL-----LKHKILIGILYGCGLRCMEVRNLRLCDLDFGRKQLKVV 151
Query 180 -GKGNKERLVPLGQMATDWIERYLVESRPQLYKSHTDYLFLTQHGGIM--------SRQN 230
GKG K+R +PL + +++Y+ +P+ DYLF GG S++
Sbjct 152 QGKGKKDRYLPLSEHLIRGLKKYIEAEKPE------DYLFGEPRGGRAGGDFDSRYSQRG 205
Query 231 FWYAIKRYALQANILPEMSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVA 290
+A+K+ + ANIL E+S HTLRH+FATHLL G D+ ++ LLGH + TT +Y +A
Sbjct 206 VQWAVKQASKTANILKEVSVHTLRHSFATHLLEDGMDILSIKNLLGHESIDTTLVYLQIA 265
Query 291 QIRMQQL 297
Q+ Q+L
Sbjct 266 QLSTQKL 272
>A0A077ELZ7 Integron integrase [Elizabethkingia anophelis NUHP1]
Length=286
Score = 112 bits (279), Expect = 3e-32
Identities = 82/247 (33%), Positives = 129/247 (52%), Gaps = 27/247 (11%)
Query 62 ETISDVLIELTKTGKSPRS--IARSLSALRQFFKFLREQKIRDDNPVALHKSPKLGRTLP 119
E I D L L K KSP ++ LR FL + + + ++L + K + LP
Sbjct 42 EQIHDYLFYLQKKSKSPSQSYFKHTVYGLR----FLLKSEGLSYDFLSLPEIKK-EKKLP 96
Query 120 KDLSEQDVEALIHAPDTNTALGLRDRAMLEVLYACGLRVSELLNLRLELINLKQGYLRIT 179
LS+Q+V ++ L+ + ++ +LY CGLR E+ NLRL ++ + L++
Sbjct 97 VVLSKQEVWQMLSGCKL-----LKHKILIGILYGCGLRCMEVRNLRLCDLDFDRKQLKVV 151
Query 180 -GKGNKERLVPLGQMATDWIERYLVESRPQLYKSHTDYLFLTQHGGIM--------SRQN 230
GKG K+R +PL +++Y+ +P+ DYLF GG S++
Sbjct 152 QGKGKKDRYLPLSDHLIRGLKKYIEAEKPE------DYLFGEPRGGRAGGGFDSRYSQRG 205
Query 231 FWYAIKRYALQANILPEMSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVA 290
+A+K+ + A IL E+S HTLRH+FATHLL G D+ ++ LLGH + TT IY +A
Sbjct 206 VQWAVKQASRAAKILKEVSVHTLRHSFATHLLEDGMDILSIKNLLGHESIDTTLIYLQIA 265
Query 291 QIRMQQL 297
Q+ Q+L
Sbjct 266 QLSTQKL 272
>Q9HIM5 Tyrosine recombinase XerA [Thermoplasma acidophilum (strain
ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)]
Length=283
Score = 109 bits (272), Expect = 3e-31
Identities = 80/293 (27%), Positives = 148/293 (51%), Gaps = 18/293 (6%)
Query 16 EQFSFLQGFRDYLVAQSVSPHTRNAY---LSDLIQCAQLVVVPLPQWSSETISDVLIELT 72
E +L F +Y+ + S +T Y + + + E + L
Sbjct 4 ETNEYLSRFVEYMTGERKSRYTIKEYRFLVDQFLSFMNKKPDEITPMDIERYKNFLAVKK 63
Query 73 KTGKSPRSIARSLSALRQFFKFLREQKIRDDNPVALHKSPKLGRTLPKDLSEQDVEALIH 132
+ K+ + +A + A++ F+K L + P+ L PK +P LSE + + LI
Sbjct 64 RYSKTSQYLA--IKAVKLFYKALDLRV-----PINL-TPPKRPSHMPVYLSEDEAKRLIE 115
Query 133 APDTNTALGLRDRAMLEVLYACGLRVSELLNLRLELINLKQGYLRI-TGKGNKERLVPLG 191
A ++T R A++ VL G+RV EL NL++ ++L++ + + +GKG+K+R+V +
Sbjct 116 AASSDT----RMYAIVSVLAYTGVRVGELCNLKISDVDLQESIINVRSGKGDKDRIVIMA 171
Query 192 QMATDWIERYLVESRPQLYKSHTDYLFLTQHGGIMSRQNFWYAIKRYALQANILPEMSPH 251
+ + YL + R + + DYLF++ I+ +A I +++PH
Sbjct 172 EECVKALGSYL-DLRLSM-DTDNDYLFVSNRRVRFDTSTIERMIRDLGKKAGIQKKVTPH 229
Query 252 TLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAQIRMQQLHEKYHPR 304
LRH FAT +L +G D+R +Q +LGH+ ++TTQIYTH+ +++++ ++ PR
Sbjct 230 VLRHTFATSVLRNGGDIRFIQQILGHASVATTQIYTHLNDSALREMYTQHRPR 282
>A0A4P6YBS3 Integrase [Flavobacterium nackdongense]
Length=262
Score = 107 bits (266), Expect = 1e-30
Identities = 66/196 (34%), Positives = 112/196 (57%), Gaps = 20/196 (10%)
Query 111 SPKLGRTLPKDLSEQDVEALIHAPDTNTALGLRDRAMLEVLYACGLRVSELLNLRLELIN 170
S K +TLP LS+++V A++ A L+ R ++ +LY CGLR E ++RL+ ++
Sbjct 64 SIKHEKTLPVVLSKEEVWAMLQ-----NAKLLKHRILIGLLYGCGLRCMEARSVRLQDLD 118
Query 171 LKQGYLRIT-GKGNKERLVPLGQMATDWIERYLVESRPQLYKSHTDYLF----LTQHGGI 225
+ L++ GKG K+R VPL + +++Y+ +P+ DYLF + + GG
Sbjct 119 FDRQQLKVVQGKGKKDRYVPLSEHLIRGLKKYIEAEKPK------DYLFNGQPIERAGGD 172
Query 226 M----SRQNFWYAIKRYALQANILPEMSPHTLRHAFATHLLNHGADLRVVQLLLGHSDLS 281
S++ +A+K+ A A + E+ HTLRH++ATHLL G D+ ++ LLGH ++
Sbjct 173 FDSRYSQRGVQWAVKQVAKAAGVKKEVHTHTLRHSYATHLLEDGMDIMTLKDLLGHQNIE 232
Query 282 TTQIYTHVAQIRMQQL 297
TT Y +AQ+ Q++
Sbjct 233 TTMEYLQIAQLASQRI 248
>Q8CM99 ISSod25 integrase Int_ISSod25 [Shewanella oneidensis (strain
MR-1)]
Length=287
Score = 104 bits (260), Expect = 2e-29
Identities = 84/275 (31%), Positives = 131/275 (48%), Gaps = 21/275 (8%)
Query 19 SFLQGFRDYLVAQSVSPHTRNAYLSDLIQCAQLVVVPLPQWSSETISDVLIELTKTGKSP 78
S LQ F D + + S TRNAYL + Q PL + E ++ L
Sbjct 3 SLLQQFHDEISLRGYSARTRNAYLYAITQLQHYANQPLDNITDEQLTAYFRYLNLEWHHS 62
Query 79 RSIAR-SLSALRQFFKFLREQKIRDDNPVALHKSPKLGRTLPKDLSEQDVEALIHAPDTN 137
R+ + L+ + F+ E ++ D + L PK LP+ LS QD+ AL++
Sbjct 63 RATLKLQLNGIHFFY----EHVLKRDFTIQL-SLPKRPHKLPQLLSCQDIAALLYH---- 113
Query 138 TALGLRDRAMLEVLYACGLRVSELLNLRLELINLKQGYLRIT-GKGNKERLVPLGQMATD 196
L+ RAML + Y CGLRVSEL ++++ I+ ++ L++ GKG +R V L
Sbjct 114 -CQNLKQRAMLALCYGCGLRVSELTHIKVADIDGQRQLLKVCQGKGACDRWVILSPTLLI 172
Query 197 WIERYLVESRPQLYKSHTDYLFLTQHGGI---MSRQNFWYAIKRYALQANILPEMSPHTL 253
+ +Y P ++LF + + + + F A+ + A A+I SPH+L
Sbjct 173 LLRQYWQAYHP------VEWLFASTYHDVVYPLHESTFRKALAKAARLASITKPCSPHSL 226
Query 254 RHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTH 288
RHA+ATH L G L +Q LGH + +T+ Y H
Sbjct 227 RHAYATHQLQAGMPLHQLQAQLGHHSIKSTERYLH 261
>B7T9W3 Phage integrase [uncultured bacterium]
Length=291
Score = 97.1 bits (240), Expect = 1e-26
Identities = 78/271 (29%), Positives = 131/271 (48%), Gaps = 11/271 (4%)
Query 22 QGFRDYLVAQSVSPHTRNAYLSDLIQCAQLVVVPLPQWSSETISDVLIELTKTGKSPRSI 81
Q D + ++++P T++AY+ + + + S E + + + G S S+
Sbjct 13 QRMLDDMRMRNLAPKTQSAYIRAVRSLTRYLRRSPDTASPEDLRLFQLHMVDAGTSAVSL 72
Query 82 ARSLSALRQFFKFLREQKIRDDNPVALHKSPKLGRTLPKDLSEQDVEALIHAPDTNTALG 141
+L+ L+ FF E+ + +A + + R LP LS+++V LI A A
Sbjct 73 NATLTGLKFFFDVTLERS----DAMAKMRPVRTPRRLPVVLSQEEVSRLIAA-----APS 123
Query 142 LRDRAMLEVLYACGLRVSELLNLRLELINLKQGYLRIT-GKGNKERLVPLGQMATDWIER 200
++ + L V Y GLRV E++ LR+ I+ ++ LR+ GKG K+R L + +
Sbjct 124 IKYQTALSVAYGAGLRVGEIVRLRVADIDSQRMTLRVDQGKGRKDRYAILPPLLLQRLRA 183
Query 201 YLVESRPQLYKSHTDYLFLTQHG-GIMSRQNFWYAIKRYALQANILPEMSPHTLRHAFAT 259
+ + + +LF + MS + + A A I ++ HTLRH+FAT
Sbjct 184 WWKAAHAEGAIRADGWLFPGRDPVQPMSARQLNRVVHEAAAAAGIGKRVAMHTLRHSFAT 243
Query 260 HLLNHGADLRVVQLLLGHSDLSTTQIYTHVA 290
HLL D+RV+Q+LLGH L TT +Y VA
Sbjct 244 HLLEQKVDIRVIQVLLGHKKLETTSMYAQVA 274
>O68847 Integron integrase [Vibrio cholerae]
Length=320
Score = 95.9 bits (237), Expect = 5e-26
Identities = 91/313 (29%), Positives = 142/313 (45%), Gaps = 55/313 (18%)
Query 20 FLQGFRDYLVAQSVSPHTRNAYLSDLIQCAQLVVVPLPQ-WSSETISDVLIELTKTGK-S 77
FL R+++ + + T AYL + + P + + + L L GK +
Sbjct 5 FLLSVREFMQTRYYAKKTIEAYLHWITRYIHFHNKKHPSLMGDKEVEEFLTYLAVQGKVA 64
Query 78 PRSIARSLSALRQFFKFLREQKIRDDNPVALH---KSPKLGRTLPKDLSEQDVEALIHAP 134
++ + +L++L +K + + P++L + +L R LP L+ ++ L+
Sbjct 65 TKTQSLALNSLSFLYKEILK------TPLSLEIRFQRSQLERKLPVVLTRDEIRRLLEIV 118
Query 135 DTNTALGLRDRAMLEVLYACGLRVSELLNLRLELINLKQGYLRI-TGKGNKERLVPLG-- 191
D L ++ +LY GLR+ E + LR++ I+ G +RI GKG K R V L
Sbjct 119 DPKHQLPIK------LLYGSGLRLMECMRLRVQDIDFDYGAIRIWQGKGGKNRTVTLAKE 172
Query 192 -------QMATD----------------WIERYLVESRPQL-YKSHTDYLF------LTQ 221
Q+A W+ L E P Y+ YLF L
Sbjct 173 LYPHLKEQIALAKRYYDRDLHQKNYGGVWLPTALKEKYPNAPYEFRWHYLFPSFQLSLDP 232
Query 222 HGGIMSRQNF-----WYAIKRYALQANILPEMSPHTLRHAFATHLLNHGADLRVVQLLLG 276
+M R + A++R A +A I ++ HTLRH+FATHLL GAD+R VQ LG
Sbjct 233 ESDVMRRHHMNETVLQKAVRRSAQEAGIEKTVTCHTLRHSFATHLLEVGADIRTVQEQLG 292
Query 277 HSDLSTTQIYTHV 289
H+D+ TTQIYTHV
Sbjct 293 HTDVKTTQIYTHV 305
Lambda K H a alpha
0.324 0.137 0.407 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1547226
Database: 5d727b81d1650e7af41550f4f86bf4d4.TrEMBL.fasta
Posted date: May 20, 2024 11:30 PM
Number of letters in database: 7,149
Number of sequences in database: 24
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
