BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 5cbda0e05678be0d7892a1633c8d3660.TrEMBL.fasta
28 sequences; 3,394 total letters
Query= ACIAD0320
Length=103
Score E
Sequences producing significant alignments: (Bits) Value
Q6FBD4 Transposase of IS1236, IS3 family (ORF 1) [Acinetobacter b... 201 9e-73
N9BBS3 Transposase [Acinetobacter towneri DSM 14962 = CIP 107472] 193 1e-69
Q43915 ORF1 gene product [Acinetobacter baylyi (strain ATCC 33305... 193 1e-69
A0A172YKW4 Transposase [Acinetobacter sp. NCu2D-2] 191 7e-69
N8UFM2 Transposase [Acinetobacter sp. CIP 102129] 191 7e-69
A0A009QHU3 Transposase family protein [Acinetobacter baumannii 62... 190 2e-68
A0A158LN81 Transposase [Acinetobacter baumannii NIPH 190] 190 2e-68
A0A1J6XB93 Transposase [Acinetobacter sp. AR2-3] 190 3e-68
R9BFD9 Transposase [Acinetobacter tandoii DSM 14970 = CIP 107469] 189 4e-68
N9LFS2 Transposase [Acinetobacter baumannii NIPH 80] 189 9e-68
A0A009IH84 Transposase family protein [Acinetobacter baumannii (s... 189 9e-68
N9LPF0 Transposase [Acinetobacter sp. NIPH 284] 189 9e-68
A0A836MGJ5 Transposase [Acinetobacter nosocomialis] 189 9e-68
A0A062FXT5 Transposase family protein [Acinetobacter sp. 72431] 187 2e-67
A0A836MGU7 Transposase [Acinetobacter nosocomialis] 187 2e-67
N8S639 Transposase [Acinetobacter seifertii] 187 4e-67
A0A334XNY2 IS1236 transposase protein 1 [Acinetobacter baumannii] 187 4e-67
A0A1E8E526 Transposase [Acinetobacter towneri] 187 4e-67
Q43916 Putative transposase [Acinetobacter baylyi (strain ATCC 33... 163 5e-54
A0A3B7LWF0 IS3 family transposase [Acinetobacter chinensis] 149 7e-49
Q9X9I2 IS1329 transposase A [Yersinia enterocolitica] 72.8 1e-21
Q8KRE6 Transposase [Azotobacter sp. FA8] 72.0 2e-21
Q46676 12.7 kDa protein [Escherichia coli] 62.8 9e-18
Q7DK18 Genes for Stx2 variant A and B subunit, ORFa and ORFb [Esc... 62.4 1e-17
Q2PG91 Transposase [Vibrio cholerae O139] 61.2 3e-17
Q56375 Transposase [Escherichia coli] 61.2 4e-17
H9L3Y1 Putative transposase [Vibrio cholerae] 61.2 4e-17
B5SZL9 Transposase OrfA [Salmonella enterica subsp. enterica sero... 61.2 4e-17
>Q6FBD4 Transposase of IS1236, IS3 family (ORF 1) [Acinetobacter
baylyi (strain ATCC 33305 / BD413 / ADP1)]
Length=102
Score = 201 bits (512), Expect = 9e-73
Identities = 101/102 (99%), Positives = 102/102 (100%), Gaps = 0/102 (0%)
Query 1 LEIQEMAKRFSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQ 60
+EIQEMAKRFSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQ
Sbjct 1 MEIQEMAKRFSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQ 60
Query 61 LSPEQQRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 102
LSPEQQRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR
Sbjct 61 LSPEQQRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 102
>N9BBS3 Transposase [Acinetobacter towneri DSM 14962 = CIP 107472]
Length=97
Score = 193 bits (491), Expect = 1e-69
Identities = 97/97 (100%), Positives = 97/97 (100%), Gaps = 0/97 (0%)
Query 6 MAKRFSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 65
MAKRFSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ
Sbjct 1 MAKRFSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 60
Query 66 QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 102
QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR
Sbjct 61 QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 97
>Q43915 ORF1 gene product [Acinetobacter baylyi (strain ATCC 33305
/ BD413 / ADP1)]
Length=97
Score = 193 bits (491), Expect = 1e-69
Identities = 97/97 (100%), Positives = 97/97 (100%), Gaps = 0/97 (0%)
Query 6 MAKRFSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 65
MAKRFSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ
Sbjct 1 MAKRFSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 60
Query 66 QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 102
QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR
Sbjct 61 QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 97
>A0A172YKW4 Transposase [Acinetobacter sp. NCu2D-2]
Length=97
Score = 191 bits (486), Expect = 7e-69
Identities = 96/97 (99%), Positives = 96/97 (99%), Gaps = 0/97 (0%)
Query 6 MAKRFSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 65
MAKRFSPEFKQQAIDYALSNSHEPIA IAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ
Sbjct 1 MAKRFSPEFKQQAIDYALSNSHEPIAAIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 60
Query 66 QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 102
QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR
Sbjct 61 QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 97
>N8UFM2 Transposase [Acinetobacter sp. CIP 102129]
Length=97
Score = 191 bits (486), Expect = 7e-69
Identities = 96/97 (99%), Positives = 96/97 (99%), Gaps = 0/97 (0%)
Query 6 MAKRFSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 65
MAKRFSPEFKQQAIDYALSNSHEPIA IAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ
Sbjct 1 MAKRFSPEFKQQAIDYALSNSHEPIAAIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 60
Query 66 QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 102
QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR
Sbjct 61 QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 97
>A0A009QHU3 Transposase family protein [Acinetobacter baumannii
625974]
Length=97
Score = 190 bits (483), Expect = 2e-68
Identities = 95/97 (98%), Positives = 96/97 (99%), Gaps = 0/97 (0%)
Query 6 MAKRFSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 65
MAKRFSPEFKQQAIDYALSNSHEPIA IAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ
Sbjct 1 MAKRFSPEFKQQAIDYALSNSHEPIAAIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 60
Query 66 QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 102
QRILELEKEVKQL+EANDILKKAHVYFLTDHAKKSTR
Sbjct 61 QRILELEKEVKQLKEANDILKKAHVYFLTDHAKKSTR 97
>A0A158LN81 Transposase [Acinetobacter baumannii NIPH 190]
Length=97
Score = 190 bits (483), Expect = 2e-68
Identities = 95/97 (98%), Positives = 96/97 (99%), Gaps = 0/97 (0%)
Query 6 MAKRFSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 65
MAKRFSPEFKQQAIDYALSNSHEPIA IAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ
Sbjct 1 MAKRFSPEFKQQAIDYALSNSHEPIAAIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 60
Query 66 QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 102
QRILELEKEVKQL+EANDILKKAHVYFLTDHAKKSTR
Sbjct 61 QRILELEKEVKQLKEANDILKKAHVYFLTDHAKKSTR 97
>A0A1J6XB93 Transposase [Acinetobacter sp. AR2-3]
Length=97
Score = 190 bits (482), Expect = 3e-68
Identities = 95/97 (98%), Positives = 95/97 (98%), Gaps = 0/97 (0%)
Query 6 MAKRFSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 65
MAKRFSPEFKQQAIDYALSNSHEPIA IAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ
Sbjct 1 MAKRFSPEFKQQAIDYALSNSHEPIAAIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 60
Query 66 QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 102
QRILELEKEVKQLRE NDILKKAHVYFLTDHAKKSTR
Sbjct 61 QRILELEKEVKQLREVNDILKKAHVYFLTDHAKKSTR 97
>R9BFD9 Transposase [Acinetobacter tandoii DSM 14970 = CIP 107469]
Length=97
Score = 189 bits (481), Expect = 4e-68
Identities = 95/97 (98%), Positives = 95/97 (98%), Gaps = 0/97 (0%)
Query 6 MAKRFSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 65
MAKRFSPEFKQQAIDYALSNSHEPIA IA KLGVGYSTLDKWIREANPVGSSKRQLSPEQ
Sbjct 1 MAKRFSPEFKQQAIDYALSNSHEPIAAIAHKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 60
Query 66 QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 102
QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR
Sbjct 61 QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 97
>N9LFS2 Transposase [Acinetobacter baumannii NIPH 80]
Length=97
Score = 189 bits (479), Expect = 9e-68
Identities = 94/97 (97%), Positives = 96/97 (99%), Gaps = 0/97 (0%)
Query 6 MAKRFSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 65
MAKRF+PEFKQQAIDYALSNSHEPIA IAQKLGVGYSTL+KWIREANPVGSSKRQLSPEQ
Sbjct 1 MAKRFNPEFKQQAIDYALSNSHEPIAAIAQKLGVGYSTLEKWIREANPVGSSKRQLSPEQ 60
Query 66 QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 102
QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR
Sbjct 61 QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 97
>A0A009IH84 Transposase family protein [Acinetobacter baumannii
(strain 1295743)]
Length=97
Score = 189 bits (479), Expect = 9e-68
Identities = 94/97 (97%), Positives = 96/97 (99%), Gaps = 0/97 (0%)
Query 6 MAKRFSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 65
MAKRF+PEFKQQAIDYALSNSHEPIA IAQKLGVGYSTL+KWIREANPVGSSKRQLSPEQ
Sbjct 1 MAKRFNPEFKQQAIDYALSNSHEPIAAIAQKLGVGYSTLEKWIREANPVGSSKRQLSPEQ 60
Query 66 QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 102
QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR
Sbjct 61 QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 97
>N9LPF0 Transposase [Acinetobacter sp. NIPH 284]
Length=97
Score = 189 bits (479), Expect = 9e-68
Identities = 94/97 (97%), Positives = 95/97 (98%), Gaps = 0/97 (0%)
Query 6 MAKRFSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 65
MAKRFSPEFKQQAIDYALSNSHEPIA IAQKLGVGYSTLDKWIRE NPVGSSKRQLSPEQ
Sbjct 1 MAKRFSPEFKQQAIDYALSNSHEPIAAIAQKLGVGYSTLDKWIRETNPVGSSKRQLSPEQ 60
Query 66 QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 102
QRILELEKEVKQL+EANDILKKAHVYFLTDHAKKSTR
Sbjct 61 QRILELEKEVKQLKEANDILKKAHVYFLTDHAKKSTR 97
>A0A836MGJ5 Transposase [Acinetobacter nosocomialis]
Length=97
Score = 189 bits (479), Expect = 9e-68
Identities = 94/97 (97%), Positives = 96/97 (99%), Gaps = 0/97 (0%)
Query 6 MAKRFSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 65
MAKRF+PEFKQQAIDYALSNSHEPIA IAQKLGVGYSTL+KWIREANPVGSSKRQLSPEQ
Sbjct 1 MAKRFNPEFKQQAIDYALSNSHEPIAAIAQKLGVGYSTLEKWIREANPVGSSKRQLSPEQ 60
Query 66 QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 102
QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR
Sbjct 61 QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 97
>A0A062FXT5 Transposase family protein [Acinetobacter sp. 72431]
Length=97
Score = 187 bits (476), Expect = 2e-67
Identities = 93/97 (96%), Positives = 96/97 (99%), Gaps = 0/97 (0%)
Query 6 MAKRFSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 65
MAKRF+PEFKQQAIDYALSNSHEPIA IAQKLGVGYSTLDKWIREANPVGSSKRQLSPE+
Sbjct 1 MAKRFNPEFKQQAIDYALSNSHEPIAAIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEK 60
Query 66 QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 102
QRI+ELEKEVKQLREANDILKKAHVYFLTDHAKKSTR
Sbjct 61 QRIVELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 97
>A0A836MGU7 Transposase [Acinetobacter nosocomialis]
Length=97
Score = 187 bits (476), Expect = 2e-67
Identities = 93/97 (96%), Positives = 96/97 (99%), Gaps = 0/97 (0%)
Query 6 MAKRFSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 65
MAKRF+PEFKQQAIDYALSNSHEPIA IAQKLGVGYSTLDKWIREANPVGSSKRQLSPE+
Sbjct 1 MAKRFNPEFKQQAIDYALSNSHEPIAAIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEK 60
Query 66 QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 102
QRI+ELEKEVKQLREANDILKKAHVYFLTDHAKKSTR
Sbjct 61 QRIVELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 97
>N8S639 Transposase [Acinetobacter seifertii]
Length=97
Score = 187 bits (475), Expect = 4e-67
Identities = 93/97 (96%), Positives = 95/97 (98%), Gaps = 0/97 (0%)
Query 6 MAKRFSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 65
MAKRF+PEFKQQAIDYALSNSHEPIA I QKLGVGYSTL+KWIREANPVGSSKRQLSPEQ
Sbjct 1 MAKRFNPEFKQQAIDYALSNSHEPIAAIVQKLGVGYSTLEKWIREANPVGSSKRQLSPEQ 60
Query 66 QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 102
QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR
Sbjct 61 QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 97
>A0A334XNY2 IS1236 transposase protein 1 [Acinetobacter baumannii]
Length=97
Score = 187 bits (475), Expect = 4e-67
Identities = 94/97 (97%), Positives = 95/97 (98%), Gaps = 0/97 (0%)
Query 6 MAKRFSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 65
MAKRFSPEFKQQAIDYALSNSHE IA IAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ
Sbjct 1 MAKRFSPEFKQQAIDYALSNSHEAIAAIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 60
Query 66 QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 102
QRILELEKEVKQL+EANDILKKAHVYFLTDHAKKSTR
Sbjct 61 QRILELEKEVKQLKEANDILKKAHVYFLTDHAKKSTR 97
>A0A1E8E526 Transposase [Acinetobacter towneri]
Length=97
Score = 187 bits (475), Expect = 4e-67
Identities = 94/97 (97%), Positives = 95/97 (98%), Gaps = 0/97 (0%)
Query 6 MAKRFSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 65
MAKRFSPEFKQQAIDYALSNSHE IA IAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ
Sbjct 1 MAKRFSPEFKQQAIDYALSNSHEAIAAIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 60
Query 66 QRILELEKEVKQLREANDILKKAHVYFLTDHAKKSTR 102
QRILELEKEVKQL+EANDILKKAHVYFLTDHAKKSTR
Sbjct 61 QRILELEKEVKQLKEANDILKKAHVYFLTDHAKKSTR 97
>Q43916 Putative transposase [Acinetobacter baylyi (strain ATCC
33305 / BD413 / ADP1)]
Length=386
Score = 163 bits (412), Expect = 5e-54
Identities = 82/83 (99%), Positives = 83/83 (100%), Gaps = 0/83 (0%)
Query 6 MAKRFSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 65
MAKRFSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ
Sbjct 1 MAKRFSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 60
Query 66 QRILELEKEVKQLREANDILKKA 88
QRILELEKEVKQLREANDILKK+
Sbjct 61 QRILELEKEVKQLREANDILKKS 83
>A0A3B7LWF0 IS3 family transposase [Acinetobacter chinensis]
Length=386
Score = 149 bits (377), Expect = 7e-49
Identities = 74/83 (89%), Positives = 78/83 (94%), Gaps = 0/83 (0%)
Query 6 MAKRFSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQLSPEQ 65
MAKRFSPEFKQQAIDYALSNSHE +A IAQKLGVGYSTLDKWIRE NP GSSKRQLSPEQ
Sbjct 1 MAKRFSPEFKQQAIDYALSNSHESVAAIAQKLGVGYSTLDKWIRETNPAGSSKRQLSPEQ 60
Query 66 QRILELEKEVKQLREANDILKKA 88
QRI+ELEKEVKQL+EAND LKK+
Sbjct 61 QRIVELEKEVKQLKEANDNLKKS 83
>Q9X9I2 IS1329 transposase A [Yersinia enterocolitica]
Length=110
Score = 72.8 bits (177), Expect = 1e-21
Identities = 37/98 (38%), Positives = 62/98 (63%), Gaps = 11/98 (11%)
Query 2 EIQEMAKRFSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREAN-------PV 54
E++ K F+ EFKQ+ ++ L + + P+ A+ + +G STL +W+R+ P+
Sbjct 6 EVRMRKKSFTHEFKQECVNLVLQHKY-PVTQAAETMNIGLSTLQRWLRQYRGESRGNTPI 64
Query 55 GSSKRQLSPEQQRILELEKEVKQLREANDILKKAHVYF 92
S+ ++PEQ+RI ELEK+V+QL+ ND+LKKA +F
Sbjct 65 ASA---ITPEQRRIQELEKQVRQLQSDNDLLKKASAFF 99
>Q8KRE6 Transposase [Azotobacter sp. FA8]
Length=107
Score = 72.0 bits (175), Expect = 2e-21
Identities = 38/93 (41%), Positives = 60/93 (65%), Gaps = 7/93 (8%)
Query 7 AKRFSPEFKQQAIDYALSNSHE------PIATIAQKLGVGYSTLDKWIREAN-PVGSSKR 59
A+++SPE +Q+A+ L + E I +IA K+G TL +W+R+A G +
Sbjct 4 ARKYSPEVRQRAVRMVLEHQDEHESQWAAINSIAAKIGCTAETLRRWVRQAERDTGRREG 63
Query 60 QLSPEQQRILELEKEVKQLREANDILKKAHVYF 92
Q +PE++RI LE+EV++LR+AN+IL+KA YF
Sbjct 64 QTTPERERIKALEREVRELRQANEILRKASAYF 96
>Q46676 12.7 kDa protein [Escherichia coli]
Length=108
Score = 62.8 bits (151), Expect = 9e-18
Identities = 38/92 (41%), Positives = 54/92 (59%), Gaps = 8/92 (9%)
Query 9 RFSPEFKQQAIDYALSNSHE------PIATIAQKLGVGYSTLDKWIR--EANPVGSSKRQ 60
RFSPE +Q+AI L + E I +IA K+G TL W+R E + GS
Sbjct 6 RFSPEVRQRAIRMVLESQDEYDSQWAAICSIAPKIGCTPETLRVWVRQHERDTGGSDGGL 65
Query 61 LSPEQQRILELEKEVKQLREANDILKKAHVYF 92
+ E+QR+ ELE+E ++LR +NDIL++A YF
Sbjct 66 TTAERQRLKELERENRELRRSNDILRQASAYF 97
>Q7DK18 Genes for Stx2 variant A and B subunit, ORFa and ORFb
[Escherichia coli]
Length=108
Score = 62.4 bits (150), Expect = 1e-17
Identities = 38/92 (41%), Positives = 53/92 (58%), Gaps = 8/92 (9%)
Query 9 RFSPEFKQQAIDYALSNSHE------PIATIAQKLGVGYSTLDKWIR--EANPVGSSKRQ 60
RFSPE +Q+AI L + E I +IA K+G TL W+R E + G
Sbjct 6 RFSPEVRQRAIRMVLESQDEYDSQWAAICSIAPKIGCTPETLRVWVRQHERDTGGGDGGL 65
Query 61 LSPEQQRILELEKEVKQLREANDILKKAHVYF 92
S E+QR+ ELE+E ++LR +NDIL++A YF
Sbjct 66 TSAERQRLKELERENRELRRSNDILRQASAYF 97
>Q2PG91 Transposase [Vibrio cholerae O139]
Length=102
Score = 61.2 bits (147), Expect = 3e-17
Identities = 35/95 (37%), Positives = 52/95 (55%), Gaps = 5/95 (5%)
Query 10 FSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQ----LSPEQ 65
FS EFK +A L ++ + AQ + VG ST+DKW+R+ K ++PEQ
Sbjct 9 FSAEFKLEAAQLVLDQNYS-VTEAAQAMNVGKSTMDKWVRQLREERQGKTPKASPMTPEQ 67
Query 66 QRILELEKEVKQLREANDILKKAHVYFLTDHAKKS 100
I EL+K++ +L E N+ILKKA ++D S
Sbjct 68 IEIRELKKKLARLEEHNEILKKATALLMSDSLNNS 102
>Q56375 Transposase [Escherichia coli]
Length=108
Score = 61.2 bits (147), Expect = 4e-17
Identities = 36/92 (39%), Positives = 53/92 (58%), Gaps = 8/92 (9%)
Query 9 RFSPEFKQQAIDYALSNSHE------PIATIAQKLGVGYSTLDKWIR--EANPVGSSKRQ 60
RFSPE +Q+A+ L + E I +IA K+G TL W+R E + G
Sbjct 6 RFSPEVRQRAVRMVLESQSEYDSQWATICSIAPKIGCTRETLRVWVRQHERDTGGGDGGL 65
Query 61 LSPEQQRILELEKEVKQLREANDILKKAHVYF 92
+ E+QR+ ELE+E ++LR +NDIL++A YF
Sbjct 66 TTAERQRLKELERENRELRRSNDILRQASAYF 97
>H9L3Y1 Putative transposase [Vibrio cholerae]
Length=114
Score = 61.2 bits (147), Expect = 4e-17
Identities = 35/95 (37%), Positives = 52/95 (55%), Gaps = 5/95 (5%)
Query 10 FSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQ----LSPEQ 65
FS EFK +A L ++ + AQ + VG ST+DKW+R+ K ++PEQ
Sbjct 21 FSAEFKLEAAQLVLDQNYS-VTEAAQAMNVGKSTMDKWVRQLREERQGKTPKASPMTPEQ 79
Query 66 QRILELEKEVKQLREANDILKKAHVYFLTDHAKKS 100
I EL+K++ +L E N+ILKKA ++D S
Sbjct 80 IEIRELKKKLARLEEHNEILKKATALLMSDSLNNS 114
>B5SZL9 Transposase OrfA [Salmonella enterica subsp. enterica
serovar Kentucky]
Length=114
Score = 61.2 bits (147), Expect = 4e-17
Identities = 35/95 (37%), Positives = 52/95 (55%), Gaps = 5/95 (5%)
Query 10 FSPEFKQQAIDYALSNSHEPIATIAQKLGVGYSTLDKWIREANPVGSSKRQ----LSPEQ 65
FS EFK +A L ++ + AQ + VG ST+DKW+R+ K ++PEQ
Sbjct 21 FSAEFKLEAAQLVLDQNYS-VTEAAQAMNVGKSTMDKWVRQLREERQGKTPKASPMTPEQ 79
Query 66 QRILELEKEVKQLREANDILKKAHVYFLTDHAKKS 100
I EL+K++ +L E N+ILKKA ++D S
Sbjct 80 IEIRELKKKLARLEEHNEILKKATALLMSDSLNNS 114
Lambda K H a alpha
0.319 0.132 0.369 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 172900
Database: 5cbda0e05678be0d7892a1633c8d3660.TrEMBL.fasta
Posted date: May 20, 2024 8:06 PM
Number of letters in database: 3,394
Number of sequences in database: 28
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
