BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: a7e9e2fb8be35e9a4ffd773978578613.SwissProt.fasta
           3 sequences; 2,170 total letters



Query= ACIAD0328

Length=77
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P45931 Uncharacterized protein YqbO [Bacillus subtilis (strain 168)]  39.3    9e-09
P34306 Uncharacterized protein C06E1.11 [Caenorhabditis elegans]      32.3    2e-06
P34327 Uncharacterized protein C13G5.2 [Caenorhabditis elegans]       30.8    8e-06


>P45931 Uncharacterized protein YqbO [Bacillus subtilis (strain 
168)]
Length=1585

 Score = 39.3 bits (90),  Expect = 9e-09
 Identities = 22/55 (40%), Positives = 28/55 (51%), Gaps = 0/55 (0%)

Query  22   NETPVPNKKSRFSPTVKGALIGAAAGSILPVFGTFSGALIGGIAGKVYSKRCAKA  76
            N+  V  K       + GA  GAA GS++P  GT  G L+GGIAG +      KA
Sbjct  751  NKDNVGEKIGSAGGGLAGAATGAAIGSVIPGVGTAIGGLVGGIAGTMGGSSLGKA  805


 Score = 18.5 bits (36),  Expect = 0.21
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 2/40 (5%)

Query  10    ARPLGS--VEPSEKNETPVPNKKSRFSPTVKGALIGAAAG  47
             A+ LG    +PSEK +T + + +   + T +      AAG
Sbjct  1496  AKALGMEVTDPSEKGQTELSSGQVTAATTGRNQTTFKAAG  1535


 Score = 16.5 bits (31),  Expect = 1.00
 Identities = 9/21 (43%), Positives = 11/21 (52%), Gaps = 0/21 (0%)

Query  56   FSGALIGGIAGKVYSKRCAKA  76
            F G   G I+G+    R AKA
Sbjct  386  FKGFKDGSISGEESLFRVAKA  406


>P34306 Uncharacterized protein C06E1.11 [Caenorhabditis elegans]
Length=234

 Score = 32.3 bits (72),  Expect = 2e-06
 Identities = 18/51 (35%), Positives = 27/51 (53%), Gaps = 1/51 (2%)

Query  26   VPNKKSRFSPTVKGALIGAAAGS-ILPVFGTFSGALIGGIAGKVYSKRCAK  75
            V    + ++     AL G++ GS I P  GT  G +IGGIAG ++    A+
Sbjct  89   VATTATTYASASAAALAGSSIGSAIFPGIGTIFGGIIGGIAGGLFGGHVAE  139


>P34327 Uncharacterized protein C13G5.2 [Caenorhabditis elegans]
Length=351

 Score = 30.8 bits (68),  Expect = 8e-06
 Identities = 17/38 (45%), Positives = 21/38 (55%), Gaps = 5/38 (13%)

Query  34   SPTVKGALIGAAAGSIL-----PVFGTFSGALIGGIAG  66
            S T     IGA AGS++     P  GT  GA++GGI G
Sbjct  242  SGTYSSGSIGAYAGSVIGTSIFPGLGTIFGAVVGGIVG  279



Lambda      K        H        a         alpha
   0.320    0.136    0.402    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 99984


  Database: a7e9e2fb8be35e9a4ffd773978578613.SwissProt.fasta
    Posted date:  Jun 3, 2024  7:50 PM
  Number of letters in database: 2,170
  Number of sequences in database:  3



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40