BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 75b0f0f2ce11bd5fdac939c0a5e3e1bf.SwissProt.fasta
21 sequences; 12,061 total letters
Query= ACIAD0340
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
Q6FF64 UvrABC system protein C [Acinetobacter baylyi (strain ATCC... 1190 0.0
B0VE41 UvrABC system protein C [Acinetobacter baumannii (strain A... 1097 0.0
B0VLX1 UvrABC system protein C [Acinetobacter baumannii (strain S... 1095 0.0
Q1Q8B0 UvrABC system protein C [Psychrobacter cryohalolentis (str... 801 0.0
A5WBX3 UvrABC system protein C [Psychrobacter sp. (strain PRwf-1)] 793 0.0
Q4FQ48 UvrABC system protein C [Psychrobacter arcticus (strain DS... 786 0.0
A4XUW4 UvrABC system protein C [Pseudomonas mendocina (strain ymp)] 597 0.0
Q02N77 UvrABC system protein C [Pseudomonas aeruginosa (strain UC... 596 0.0
B7V4X6 UvrABC system protein C [Pseudomonas aeruginosa (strain LE... 596 0.0
Q9I0Q1 UvrABC system protein C [Pseudomonas aeruginosa (strain AT... 594 0.0
B1JB85 UvrABC system protein C [Pseudomonas putida (strain W619)] 591 0.0
P32966 UvrABC system protein C [Pseudomonas protegens (strain DSM... 580 0.0
Q52377 UvrABC system protein C [Pseudomonas syringae pv. syringae... 575 0.0
O66041 UvrABC system protein C [Salmonella typhimurium (strain LT... 508 1e-177
P0A8G0 UvrABC system protein C [Escherichia coli (strain K12)] 506 1e-176
P73580 UvrABC system protein C [Synechocystis sp. (strain PCC 680... 361 3e-120
P14951 UvrABC system protein C [Bacillus subtilis (strain 168)] 335 2e-110
O84898 UvrABC system protein C [Mycoplasmopsis bovis (strain ATCC... 161 9e-46
O84899 UvrABC system protein C [Mycoplasmopsis agalactiae (strain... 147 8e-41
P76213 Excinuclease cho [Escherichia coli (strain K12)] 62.8 1e-13
P07992 DNA excision repair protein ERCC-1 [Homo sapiens] 43.1 3e-07
>Q6FF64 UvrABC system protein C [Acinetobacter baylyi (strain
ATCC 33305 / BD413 / ADP1)]
Length=599
Score = 1190 bits (3079), Expect = 0.0
Identities = 598/599 (99%), Positives = 599/599 (100%), Gaps = 0/599 (0%)
Query 1 VNPNARPHIEKILANMTQLPGVYRMLGKDGELLYVGKAKNLKNRVSSYFVKTIEHPKTQA 60
+NPNARPHIEKILANMTQLPGVYRMLGKDGELLYVGKAKNLKNRVSSYFVKTIEHPKTQA
Sbjct 1 MNPNARPHIEKILANMTQLPGVYRMLGKDGELLYVGKAKNLKNRVSSYFVKTIEHPKTQA 60
Query 61 LVARIHDIETLVTRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVSSDKPYPRIAS 120
LVARIHDIETLVTRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVSSDKPYPRIAS
Sbjct 61 LVARIHDIETLVTRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVSSDKPYPRIAS 120
Query 121 GRGKGKHQIGKFFGPYPSAYSARDTLLVLQKLFNVRQCENSYFAQRKRPCLQYQIKRCSA 180
GRGKGKHQIGKFFGPYPSAYSARDTLLVLQKLFNVRQCENSYFAQRKRPCLQYQIKRCSA
Sbjct 121 GRGKGKHQIGKFFGPYPSAYSARDTLLVLQKLFNVRQCENSYFAQRKRPCLQYQIKRCSA 180
Query 181 PCVGLISPEDYKQDVDNSIRFLQGDTKELNQELIAKMEEAAEQLAFEKAMFYRDRLGLLR 240
PCVGLISPEDYKQDVDNSIRFLQGDTKELNQELIAKMEEAAEQLAFEKAMFYRDRLGLLR
Sbjct 181 PCVGLISPEDYKQDVDNSIRFLQGDTKELNQELIAKMEEAAEQLAFEKAMFYRDRLGLLR 240
Query 241 EVQAQQAVFKIKGEADILAIAFQAGVTCVQIMYVRNGRMLGGKSYFPDMLSDDLGQMLSD 300
EVQAQQAVFKIKGEADILAIAFQAGVTCVQIMYVRNGRMLGGKSYFPDMLSDDLGQMLSD
Sbjct 241 EVQAQQAVFKIKGEADILAIAFQAGVTCVQIMYVRNGRMLGGKSYFPDMLSDDLGQMLSD 300
Query 301 FIANFYFQVADEVPSELIVNVELPDRKELEQALQTQFDKKIQIKHKVRETRAEWQELAIM 360
FIANFYFQVADEVPSELIVNVELPDRKELEQALQTQFDKKIQIKHKVRETRAEWQELAIM
Sbjct 301 FIANFYFQVADEVPSELIVNVELPDRKELEQALQTQFDKKIQIKHKVRETRAEWQELAIM 360
Query 361 NVQHAIKGQLSNHLELNERFHQLEQVVGRPVDRIECFDISHTMGEATIASCVVFDQGGAR 420
NVQHAIKGQLSNHLELNERFHQLEQVVGRPVDRIECFDISHTMGEATIASCVVFDQGGAR
Sbjct 361 NVQHAIKGQLSNHLELNERFHQLEQVVGRPVDRIECFDISHTMGEATIASCVVFDQGGAR 420
Query 421 KRDYRQFGIEDITAGDDYAAMRQALTRRYKKHIVPDLLLIDGGKGQLHMAMEVMQTLGLD 480
KRDYRQFGIEDITAGDDYAAMRQALTRRYKKHIVPDLLLIDGGKGQLHMAMEVMQTLGLD
Sbjct 421 KRDYRQFGIEDITAGDDYAAMRQALTRRYKKHIVPDLLLIDGGKGQLHMAMEVMQTLGLD 480
Query 481 AFMVGVSKGEGRKPGLETLHFTDGSKIQLPEDHKALHLIQQVRDEAHRFAITKHRAKRDK 540
AFMVGVSKGEGRKPGLETLHFTDGSKIQLPEDHKALHLIQQVRDEAHRFAITKHRAKRDK
Sbjct 481 AFMVGVSKGEGRKPGLETLHFTDGSKIQLPEDHKALHLIQQVRDEAHRFAITKHRAKRDK 540
Query 541 RRAGSVLEVIPGLGPKRRRDLLTHFGGIQGVLKASEKELMLVSGLGPSMARTIYKILHE 599
RRAGSVLEVIPGLGPKRRRDLLTHFGGIQGVLKASEKELMLVSGLGPSMARTIYKILHE
Sbjct 541 RRAGSVLEVIPGLGPKRRRDLLTHFGGIQGVLKASEKELMLVSGLGPSMARTIYKILHE 599
>B0VE41 UvrABC system protein C [Acinetobacter baumannii (strain
AYE)]
Length=599
Score = 1097 bits (2837), Expect = 0.0
Identities = 547/599 (91%), Positives = 573/599 (96%), Gaps = 0/599 (0%)
Query 1 VNPNARPHIEKILANMTQLPGVYRMLGKDGELLYVGKAKNLKNRVSSYFVKTIEHPKTQA 60
+N NARPHIEKILAN+TQLPGVY+MLGK+GELLYVGKAKNLKNRVSSYFVKTIEHPKTQA
Sbjct 1 MNQNARPHIEKILANLTQLPGVYKMLGKEGELLYVGKAKNLKNRVSSYFVKTIEHPKTQA 60
Query 61 LVARIHDIETLVTRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVSSDKPYPRIAS 120
LVARI+DIETLVTRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVS+DKPYPRIAS
Sbjct 61 LVARIYDIETLVTRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVSADKPYPRIAS 120
Query 121 GRGKGKHQIGKFFGPYPSAYSARDTLLVLQKLFNVRQCENSYFAQRKRPCLQYQIKRCSA 180
GRGKGKHQIGKFFGPYPSAYSARDTLLVLQKLFNVRQCENSYF+QRKRPCLQYQIKRCSA
Sbjct 121 GRGKGKHQIGKFFGPYPSAYSARDTLLVLQKLFNVRQCENSYFSQRKRPCLQYQIKRCSA 180
Query 181 PCVGLISPEDYKQDVDNSIRFLQGDTKELNQELIAKMEEAAEQLAFEKAMFYRDRLGLLR 240
PCVGL+SPEDYK+DV+NSIRFLQGDTKELNQELIAKME+AA L FEKA+FYRDRL LLR
Sbjct 181 PCVGLVSPEDYKEDVNNSIRFLQGDTKELNQELIAKMEQAAADLEFEKAVFYRDRLSLLR 240
Query 241 EVQAQQAVFKIKGEADILAIAFQAGVTCVQIMYVRNGRMLGGKSYFPDMLSDDLGQMLSD 300
EVQAQQAVFK+KGEADILAIA+QAGVTCVQIM+VRNGRMLGGKSYFPDML DDLGQMLSD
Sbjct 241 EVQAQQAVFKVKGEADILAIAYQAGVTCVQIMHVRNGRMLGGKSYFPDMLGDDLGQMLSD 300
Query 301 FIANFYFQVADEVPSELIVNVELPDRKELEQALQTQFDKKIQIKHKVRETRAEWQELAIM 360
F+ANFYFQVADEVPSELIVN LPDRKELE+AL QF KK+QIK VRETRAEW ELA M
Sbjct 301 FMANFYFQVADEVPSELIVNTALPDRKELEEALAQQFGKKVQIKSSVRETRAEWLELAEM 360
Query 361 NVQHAIKGQLSNHLELNERFHQLEQVVGRPVDRIECFDISHTMGEATIASCVVFDQGGAR 420
NVQHAIKGQLSNHLELNERFHQLEQVVGRP+DRIECFDISHTMGEA IASCVVFDQGGAR
Sbjct 361 NVQHAIKGQLSNHLELNERFHQLEQVVGRPIDRIECFDISHTMGEAPIASCVVFDQGGAR 420
Query 421 KRDYRQFGIEDITAGDDYAAMRQALTRRYKKHIVPDLLLIDGGKGQLHMAMEVMQTLGLD 480
KRDYRQF I+DITAGDDYAAMRQALTRRYKK ++PDLLLIDGGKGQLHMAMEVMQ LGL+
Sbjct 421 KRDYRQFAIQDITAGDDYAAMRQALTRRYKKAMLPDLLLIDGGKGQLHMAMEVMQELGLE 480
Query 481 AFMVGVSKGEGRKPGLETLHFTDGSKIQLPEDHKALHLIQQVRDEAHRFAITKHRAKRDK 540
AFMVGVSKGEGRKPGLETLHFTDG+KIQLPED KALHLIQQVRDEAHRFAITKHRAKRDK
Sbjct 481 AFMVGVSKGEGRKPGLETLHFTDGTKIQLPEDSKALHLIQQVRDEAHRFAITKHRAKRDK 540
Query 541 RRAGSVLEVIPGLGPKRRRDLLTHFGGIQGVLKASEKELMLVSGLGPSMARTIYKILHE 599
RR+ SVLE IPGLGPKRRRDLLTHFGGIQGVLKASEKEL +V GLG MARTIYKILHE
Sbjct 541 RRSTSVLEAIPGLGPKRRRDLLTHFGGIQGVLKASEKELTVVPGLGEVMARTIYKILHE 599
>B0VLX1 UvrABC system protein C [Acinetobacter baumannii (strain
SDF)]
Length=599
Score = 1095 bits (2833), Expect = 0.0
Identities = 546/599 (91%), Positives = 572/599 (95%), Gaps = 0/599 (0%)
Query 1 VNPNARPHIEKILANMTQLPGVYRMLGKDGELLYVGKAKNLKNRVSSYFVKTIEHPKTQA 60
+N NARPHIEKILAN+TQLPGVY+MLGK+GELLYVGKAKNLKNRVSSYFVKTIEHPKTQA
Sbjct 1 MNQNARPHIEKILANLTQLPGVYKMLGKEGELLYVGKAKNLKNRVSSYFVKTIEHPKTQA 60
Query 61 LVARIHDIETLVTRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVSSDKPYPRIAS 120
LVARI+DIETLVTRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVS+DKPYPRIAS
Sbjct 61 LVARIYDIETLVTRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVSADKPYPRIAS 120
Query 121 GRGKGKHQIGKFFGPYPSAYSARDTLLVLQKLFNVRQCENSYFAQRKRPCLQYQIKRCSA 180
GRGKGKHQIGKFFGPYPSAYSARDTLLVLQKLFNVRQCENSYF+QRKRPCLQYQIKRCSA
Sbjct 121 GRGKGKHQIGKFFGPYPSAYSARDTLLVLQKLFNVRQCENSYFSQRKRPCLQYQIKRCSA 180
Query 181 PCVGLISPEDYKQDVDNSIRFLQGDTKELNQELIAKMEEAAEQLAFEKAMFYRDRLGLLR 240
PCVGL+SPEDYK+DV+NSIRFLQGDTKELNQELIAKME+AA L FEKA+FYRDRL LLR
Sbjct 181 PCVGLVSPEDYKEDVNNSIRFLQGDTKELNQELIAKMEQAAADLEFEKAVFYRDRLSLLR 240
Query 241 EVQAQQAVFKIKGEADILAIAFQAGVTCVQIMYVRNGRMLGGKSYFPDMLSDDLGQMLSD 300
EVQAQQAVFK+KGEADILAI +QAGVTCVQIM+VRNGRMLGGKSYFPDML DDLGQMLSD
Sbjct 241 EVQAQQAVFKVKGEADILAITYQAGVTCVQIMHVRNGRMLGGKSYFPDMLGDDLGQMLSD 300
Query 301 FIANFYFQVADEVPSELIVNVELPDRKELEQALQTQFDKKIQIKHKVRETRAEWQELAIM 360
F+ANFYFQVADEVPSELIVN LPDRKELE+AL QF KK+QIK VRETRAEW ELA M
Sbjct 301 FMANFYFQVADEVPSELIVNTALPDRKELEEALAQQFGKKVQIKSSVRETRAEWLELAEM 360
Query 361 NVQHAIKGQLSNHLELNERFHQLEQVVGRPVDRIECFDISHTMGEATIASCVVFDQGGAR 420
NVQHAIKGQLSNHLELNERFHQLEQVVGRP+DRIECFDISHTMGEA IASCVVFDQGGAR
Sbjct 361 NVQHAIKGQLSNHLELNERFHQLEQVVGRPIDRIECFDISHTMGEAPIASCVVFDQGGAR 420
Query 421 KRDYRQFGIEDITAGDDYAAMRQALTRRYKKHIVPDLLLIDGGKGQLHMAMEVMQTLGLD 480
KRDYRQF I+DITAGDDYAAMRQALTRRYKK ++PDLLLIDGGKGQLHMAMEVMQ LGL+
Sbjct 421 KRDYRQFAIQDITAGDDYAAMRQALTRRYKKAMLPDLLLIDGGKGQLHMAMEVMQELGLE 480
Query 481 AFMVGVSKGEGRKPGLETLHFTDGSKIQLPEDHKALHLIQQVRDEAHRFAITKHRAKRDK 540
AFMVGVSKGEGRKPGLETLHFTDG+KIQLPED KALHLIQQVRDEAHRFAITKHRAKRDK
Sbjct 481 AFMVGVSKGEGRKPGLETLHFTDGTKIQLPEDSKALHLIQQVRDEAHRFAITKHRAKRDK 540
Query 541 RRAGSVLEVIPGLGPKRRRDLLTHFGGIQGVLKASEKELMLVSGLGPSMARTIYKILHE 599
RR+ SVLE IPGLGPKRRRDLLTHFGGIQGVLKASEKEL +V GLG MARTIYKILHE
Sbjct 541 RRSTSVLEAIPGLGPKRRRDLLTHFGGIQGVLKASEKELTVVPGLGEVMARTIYKILHE 599
>Q1Q8B0 UvrABC system protein C [Psychrobacter cryohalolentis
(strain ATCC BAA-1226 / DSM 17306 / VKM B-2378 / K5)]
Length=614
Score = 801 bits (2068), Expect = 0.0
Identities = 381/601 (63%), Positives = 496/601 (83%), Gaps = 7/601 (1%)
Query 6 RPHIEKILANMTQLPGVYRMLGKDGELLYVGKAKNLKNRVSSYFVKTIEHPKTQALVARI 65
+ ++ ++ + LPGVY+MLGK+G++LYVGKAK+LK+RV+SYF KTI+HPKT+ALVARI
Sbjct 14 KARLKHLIQRLPNLPGVYKMLGKNGDILYVGKAKSLKSRVNSYFAKTIDHPKTRALVARI 73
Query 66 HDIETLVTRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVSSDKPYPRIASGRGKG 125
H+IET++TRSETEALLLEQNLIK++RPPYN++LRDDKSY+Y+F+S+DKPYPR+A GRGKG
Sbjct 74 HNIETIITRSETEALLLEQNLIKEYRPPYNVLLRDDKSYLYVFISADKPYPRLAYGRGKG 133
Query 126 KHQIGKFFGPYPSAYSARDTLLVLQKLFNVRQCENSYFAQRKRPCLQYQIKRCSAPCVGL 185
HQ G+FFGP+PSA++A++TL+++QK+F +RQC N++F QRKRPCL+YQIKRC APCVGL
Sbjct 134 NHQKGRFFGPFPSAHAAKETLVLMQKMFQMRQCTNTFFKQRKRPCLEYQIKRCRAPCVGL 193
Query 186 ISPEDYKQDVDNSIRFLQGDTKELNQELIAKMEEAAEQLAFEKAMFYRDRLGLLREVQAQ 245
+SPE+Y +DV+N+IRFL+GD+ +++ LI KME +AE+L FEKA+FYRD+L +LREVQA+
Sbjct 194 VSPEEYSEDVNNTIRFLKGDSSDIHTALIEKMEASAEELDFEKAVFYRDQLSMLREVQAK 253
Query 246 QAVFKIKGEADILAIAFQAGVTCVQIMYVRNGRMLGGKSYFPDM-LSDDLGQMLSDFIAN 304
QAV+ ++GEAD++AIA Q G+TCV ++ VR GR+LGGK+YFPD+ S+ L LS FI +
Sbjct 254 QAVYTVQGEADVIAIASQGGMTCVNVLTVRGGRVLGGKNYFPDVDSSEPLADNLSAFITS 313
Query 305 FYFQVADEVPSELIVNVELPDRKELEQALQTQFDKKIQIKHKVRETRAEWQELAIMNVQH 364
FYFQV D++P+E+I++ ELPD+ + +AL T F K+ IK VRE RAEW +LA +N +
Sbjct 314 FYFQVTDDLPAEIILSDELPDQLAVSEALATHFGSKVVIKTSVREHRAEWLDLAKLNTNN 373
Query 365 AIKGQLSNHLELNERFHQLE----QVVGRPVDRIECFDISHTMGEATIASCVVFDQGGAR 420
A+K +L ++LEL+ RF L+ +V R +DRIECFDISHTMGEATI SCVVFDQGG+R
Sbjct 374 ALKTKLGDYLELHARFGALKDVLTEVTDRTIDRIECFDISHTMGEATIGSCVVFDQGGSR 433
Query 421 KRDYRQFGIEDITAGDDYAAMRQALTRRYKKHIVPDLLLIDGGKGQLHMAMEVMQTLGL- 479
+RDYRQ+ I DI GDDYAAM+Q LTRRYKK +PDLLLIDGGKGQL +A EV+ LG+
Sbjct 434 RRDYRQYAIHDIVGGDDYAAMKQVLTRRYKKQPLPDLLLIDGGKGQLGIAKEVLTELGIL 493
Query 480 -DAFMVGVSKGEGRKPGLETLHFTDGSKIQLPEDHKALHLIQQVRDEAHRFAITKHRAKR 538
D ++ V+KGEGRK GLE LHF D + LP D KALHL+ +RDEAHRFAIT HR KR
Sbjct 494 GDTLLISVAKGEGRKAGLEVLHFIDHEPLDLPMDSKALHLLMHIRDEAHRFAITAHRKKR 553
Query 539 DKRRAGSVLEVIPGLGPKRRRDLLTHFGGIQGVLKASEKELMLVSGLGPSMARTIYKILH 598
DKRR+ SVLEVIPGLG KRRRDLL HFGG+Q +L AS++EL V G+GP +A+T+YK+LH
Sbjct 554 DKRRSSSVLEVIPGLGEKRRRDLLNHFGGMQQLLGASQQELAGVQGIGPVLAKTVYKVLH 613
Query 599 E 599
E
Sbjct 614 E 614
>A5WBX3 UvrABC system protein C [Psychrobacter sp. (strain PRwf-1)]
Length=614
Score = 793 bits (2047), Expect = 0.0
Identities = 382/598 (64%), Positives = 491/598 (82%), Gaps = 7/598 (1%)
Query 9 IEKILANMTQLPGVYRMLGKDGELLYVGKAKNLKNRVSSYFVKTIEHPKTQALVARIHDI 68
++ ++ + LPGVY+MLGK+G++LYVGKAK+LK+RV+SYF KTI+HPKT+ALV+RIHDI
Sbjct 17 LKHLIKRLPNLPGVYKMLGKNGDILYVGKAKSLKSRVNSYFAKTIDHPKTRALVSRIHDI 76
Query 69 ETLVTRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVSSDKPYPRIASGRGKGKHQ 128
ET++TRSETEALLLEQNLIK+HRPPYN++LRDDKSY+Y+F+S+D+PYPR+A GRGK KHQ
Sbjct 77 ETIITRSETEALLLEQNLIKEHRPPYNVLLRDDKSYLYVFISADQPYPRLAYGRGKAKHQ 136
Query 129 IGKFFGPYPSAYSARDTLLVLQKLFNVRQCENSYFAQRKRPCLQYQIKRCSAPCVGLISP 188
GKFFGP+PSA++A++TL+++QK+F +RQC N++F QRKRPCL+YQIKRC APCVGL+S
Sbjct 137 KGKFFGPFPSAHAAKETLVLMQKMFQMRQCTNTFFRQRKRPCLEYQIKRCRAPCVGLVSA 196
Query 189 EDYKQDVDNSIRFLQGDTKELNQELIAKMEEAAEQLAFEKAMFYRDRLGLLREVQAQQAV 248
E+Y DV N+IRFL+GD+ +++ LI KME +AE L FEKA FYRD+L +LREVQ++QAV
Sbjct 197 EEYAADVQNTIRFLKGDSSDIHTTLIEKMEHSAEALDFEKAAFYRDQLSMLREVQSRQAV 256
Query 249 FKIKGEADILAIAFQAGVTCVQIMYVRNGRMLGGKSYFPDMLSDD-LGQMLSDFIANFYF 307
+ ++GEADI++IA QAG+TCV ++ VR GR+LGGK+YFPD+ S++ + LS FI +FYF
Sbjct 257 YTVQGEADIISIASQAGMTCVNVLTVRGGRVLGGKNYFPDVDSNEPINDNLSAFITSFYF 316
Query 308 QVADEVPSELIVNVELPDRKELEQALQTQFDKKIQIKHKVRETRAEWQELAIMNVQHAIK 367
QV D++P+E+I++ ELPD+ L++AL T F+ K IK VRE RAEW +LA +N +A+K
Sbjct 317 QVTDDLPAEIIISHELPDQMALQEALSTYFEAKTVIKTNVREHRAEWLDLAKLNAHNALK 376
Query 368 GQLSNHLELNERFHQLEQVV----GRPVDRIECFDISHTMGEATIASCVVFDQGGARKRD 423
+L ++LEL+ RF L++V+ +D IECFDISHTMGEATIASCVVFDQGGARKRD
Sbjct 377 TKLGDYLELHARFAALKEVLEPVSQSSIDTIECFDISHTMGEATIASCVVFDQGGARKRD 436
Query 424 YRQFGIEDITAGDDYAAMRQALTRRYKKHIVPDLLLIDGGKGQLHMAMEVMQTLGL--DA 481
YRQ+ I + GDDYAAM QA+TRRYKKH +PD+LLIDGGKGQL MA V+ LGL D
Sbjct 437 YRQYAIHGVQDGDDYAAMAQAITRRYKKHPLPDVLLIDGGKGQLSMAKNVLTELGLLNDT 496
Query 482 FMVGVSKGEGRKPGLETLHFTDGSKIQLPEDHKALHLIQQVRDEAHRFAITKHRAKRDKR 541
++GV+KGEGRK GLE LHF + + LP D KALHLI +RDEAHRFAIT HR KRDKR
Sbjct 497 LLIGVAKGEGRKAGLEVLHFIEHEPLDLPMDSKALHLIMNIRDEAHRFAITAHRKKRDKR 556
Query 542 RAGSVLEVIPGLGPKRRRDLLTHFGGIQGVLKASEKELMLVSGLGPSMARTIYKILHE 599
R+ SVLE IPGLG KRRRDLL HFGG+Q +L AS++EL V+G+G MA TIYK+LHE
Sbjct 557 RSSSVLEAIPGLGEKRRRDLLNHFGGLQQLLGASQQELEGVNGIGKVMANTIYKVLHE 614
>Q4FQ48 UvrABC system protein C [Psychrobacter arcticus (strain
DSM 17307 / VKM B-2377 / 273-4)]
Length=614
Score = 786 bits (2031), Expect = 0.0
Identities = 375/601 (62%), Positives = 491/601 (82%), Gaps = 7/601 (1%)
Query 6 RPHIEKILANMTQLPGVYRMLGKDGELLYVGKAKNLKNRVSSYFVKTIEHPKTQALVARI 65
+ ++ ++ + LPGVY+MLGK+G++LYVGKAK+LK+RV+SYF KTI+HPKT+ALVARI
Sbjct 14 KARLKHLIQRLPNLPGVYKMLGKNGDILYVGKAKSLKSRVNSYFAKTIDHPKTRALVARI 73
Query 66 HDIETLVTRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVSSDKPYPRIASGRGKG 125
H+IET++TRSETEALLLEQNLIK++RPPYN++LRDDKSY+Y+F+S+D+PYPR+A GRGK
Sbjct 74 HNIETIITRSETEALLLEQNLIKEYRPPYNVLLRDDKSYLYVFISADQPYPRLAYGRGKV 133
Query 126 KHQIGKFFGPYPSAYSARDTLLVLQKLFNVRQCENSYFAQRKRPCLQYQIKRCSAPCVGL 185
HQ G FFGP+PSA++A++TL+++QK+F +RQC N++F QRKRPCL+YQIKRC APCVGL
Sbjct 134 NHQKGCFFGPFPSAHAAKETLVLMQKMFQMRQCTNTFFKQRKRPCLEYQIKRCRAPCVGL 193
Query 186 ISPEDYKQDVDNSIRFLQGDTKELNQELIAKMEEAAEQLAFEKAMFYRDRLGLLREVQAQ 245
+S E+Y +DV+N+IRFL+GD+ +++ LI KME +AE+L FEKA+FYRD+L +LREVQA+
Sbjct 194 VSAEEYSEDVNNTIRFLKGDSSDIHSALIEKMEASAEELDFEKAVFYRDQLSMLREVQAK 253
Query 246 QAVFKIKGEADILAIAFQAGVTCVQIMYVRNGRMLGGKSYFPDM-LSDDLGQMLSDFIAN 304
QAV+ ++GEAD++AIA Q G+TCV ++ VR GR+LGGK+YFPD+ S L LS FI +
Sbjct 254 QAVYTVQGEADVIAIASQVGMTCVNVLTVRGGRVLGGKNYFPDVDSSQPLADNLSAFITS 313
Query 305 FYFQVADEVPSELIVNVELPDRKELEQALQTQFDKKIQIKHKVRETRAEWQELAIMNVQH 364
FYFQV D++P+E++++ ELPD+ + +AL + F K+ IK VRE RAEW +LA +N +
Sbjct 314 FYFQVTDDLPAEIMLSHELPDQVAVSEALASHFGSKVVIKTNVREHRAEWLDLAKLNTNN 373
Query 365 AIKGQLSNHLELNERFHQLEQVVG----RPVDRIECFDISHTMGEATIASCVVFDQGGAR 420
A+K +L ++LEL+ RF L+ V+ R +DRIECFDISHTMGEATI CVVFDQ G+R
Sbjct 374 ALKTKLGDYLELHARFGALKDVLADITDRTIDRIECFDISHTMGEATIGGCVVFDQSGSR 433
Query 421 KRDYRQFGIEDITAGDDYAAMRQALTRRYKKHIVPDLLLIDGGKGQLHMAMEVMQTLGL- 479
+RDYRQ+ I DI GDDYAAM+Q LTRRYKK +PDLLLIDGGKGQL +A EV+ LG+
Sbjct 434 RRDYRQYAIHDIVGGDDYAAMKQVLTRRYKKQPLPDLLLIDGGKGQLGIAKEVLTELGML 493
Query 480 -DAFMVGVSKGEGRKPGLETLHFTDGSKIQLPEDHKALHLIQQVRDEAHRFAITKHRAKR 538
D ++GV+KGEGRK GLE LHF D + LP D KALHL+ +RDEAHRFAIT HR KR
Sbjct 494 GDTLLIGVAKGEGRKAGLEVLHFIDHEPLDLPMDSKALHLLMHIRDEAHRFAITAHRKKR 553
Query 539 DKRRAGSVLEVIPGLGPKRRRDLLTHFGGIQGVLKASEKELMLVSGLGPSMARTIYKILH 598
DKRR+ SVLEVIPGLG KRRRDLL HFGG+Q +L AS++EL V G+GP +A+T+YK+LH
Sbjct 554 DKRRSSSVLEVIPGLGEKRRRDLLNHFGGLQQLLGASQQELAGVQGIGPILAKTVYKVLH 613
Query 599 E 599
E
Sbjct 614 E 614
>A4XUW4 UvrABC system protein C [Pseudomonas mendocina (strain
ymp)]
Length=607
Score = 597 bits (1538), Expect = 0.0
Identities = 314/597 (53%), Positives = 417/597 (70%), Gaps = 13/597 (2%)
Query 13 LANMTQLPGVYRMLGKDGELLYVGKAKNLKNRVSSYFVKTIEHPKTQALVARIHDIETLV 72
LA + PGVYRM D LLYVGKAKNLK R+SSYF KT + PKT ALVARI +ET +
Sbjct 11 LATCSGRPGVYRMFDADARLLYVGKAKNLKKRLSSYFRKTGQAPKTAALVARIAQVETTI 70
Query 73 TRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVSSDKPYPRIASGRGKGKHQIGKF 132
T +ETEALLLEQ LIK+ RPPYNI+LRDDKSY Y+F+S D +PR+ RG K + G++
Sbjct 71 TANETEALLLEQTLIKEWRPPYNILLRDDKSYPYVFLS-DGEFPRLGIHRGAKKAK-GRY 128
Query 133 FGPYPSAYSARDTLLVLQKLFNVRQCENSYFAQRKRPCLQYQIKRCSAPCVGLISPEDYK 192
FGPYPSA + R++L +LQK F VRQCE+SY+ R RPCLQYQIKRC PCVGL+SPE+Y
Sbjct 129 FGPYPSALAIRESLSLLQKTFLVRQCEDSYYRNRTRPCLQYQIKRCKGPCVGLVSPEEYA 188
Query 193 QDVDNSIRFLQGDTKELNQELIAKMEEAAEQLAFEKAMFYRDRLGLLREVQAQQAVFKIK 252
+DV +S+ FL+G + L++EL A ME+A+ L FE+A RD++ +LR VQ QQ++
Sbjct 189 EDVRHSVMFLEGRSNALSEELSASMEKASMALEFERAAELRDQISMLRRVQDQQSMEGGS 248
Query 253 GEADILAIAFQAGVTCVQIMYVRNGRMLGGKSYFPDM-LSDDLGQMLSDFIANFYFQVAD 311
G+ D++A+ G CV ++ VR GR+LG K++FP + + ++ G++L F+A +Y A+
Sbjct 249 GDVDVVAVMLNPGGACVHLISVRGGRVLGSKNFFPQVAIEEEGGEVLMAFLAQYYLGNAE 308
Query 312 -EVPSELIVNVELPDRKELEQALQTQFDKKIQIKHKVRETRAEWQELAIMNVQHAIKGQL 370
++PSELIVNV+ D L +A+++ + + I +VR TRA WQ+LA+ N + A+ +L
Sbjct 309 RDLPSELIVNVQHEDFSTLIEAVESLRGRSLSISLRVRGTRARWQQLAVTNAEQALAARL 368
Query 371 SNHLELNERFHQLEQV--VGRPVDRIECFDISHTMGEATIASCVVFDQGGARKRDYRQFG 428
+N L ERF L V + P R+ECFDISH+ GEAT+ASCVVF G K DYR+F
Sbjct 369 ANRQHLAERFEALATVLEMDEPPQRMECFDISHSSGEATVASCVVFGPEGPLKSDYRRFN 428
Query 429 IEDITAGDDYAAMRQALTRRYKK-----HIVPDLLLIDGGKGQLHMAMEVMQTLGL-DAF 482
IE +T GDDYAAM QALTRR+ K +PD+LL+DGGKGQL MA EV+Q L + D
Sbjct 429 IEGVTPGDDYAAMHQALTRRFSKIKDGEGKLPDVLLVDGGKGQLAMAREVLQELAVPDLI 488
Query 483 MVGVSKGEGRKPGLETLHFTDGS-KIQLPEDHKALHLIQQVRDEAHRFAITKHRAKRDKR 541
++GV+KG RKPGLE L+ D + LP + ALHLIQQ+RDE+HRFAIT HRA+R K
Sbjct 489 LLGVAKGTTRKPGLEVLYLNDAEHEFTLPGNSPALHLIQQIRDESHRFAITGHRARRGKA 548
Query 542 RAGSVLEVIPGLGPKRRRDLLTHFGGIQGVLKASEKELMLVSGLGPSMARTIYKILH 598
R S LE + G+GPKRRR+LL HFGG+Q + +AS +E+ G+ +A IY LH
Sbjct 549 RRTSTLEEVAGIGPKRRRELLNHFGGLQELSRASAEEIAKAPGISKKLAELIYATLH 605
>Q02N77 UvrABC system protein C [Pseudomonas aeruginosa (strain
UCBPP-PA14)]
Length=608
Score = 596 bits (1536), Expect = 0.0
Identities = 313/597 (52%), Positives = 416/597 (70%), Gaps = 12/597 (2%)
Query 13 LANMTQLPGVYRMLGKDGELLYVGKAKNLKNRVSSYFVKTIEHPKTQALVARIHDIETLV 72
LA + PGVYRM D +LLYVGKAK+LK R++SYF K+ PKT ALVARI +ET +
Sbjct 11 LATCSNRPGVYRMFDADAKLLYVGKAKSLKKRLASYFRKSGLAPKTAALVARIAQVETTI 70
Query 73 TRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVSSDKPYPRIASGRGKGKHQIGKF 132
T +ETEALLLEQ LIK+ RPPYNI+LRDDKSY ++F+SS+ YPR++ RG K + G++
Sbjct 71 TANETEALLLEQTLIKEWRPPYNILLRDDKSYPFVFLSSEDEYPRLSLHRGAKKRK-GRY 129
Query 133 FGPYPSAYSARDTLLVLQKLFNVRQCENSYFAQRKRPCLQYQIKRCSAPCVGLISPEDYK 192
FGPYPSA + R++L +LQK F VRQCE+SYF R RPCLQYQIKRC PCVGL+SPE+Y
Sbjct 130 FGPYPSAGAIRESLNLLQKAFLVRQCEDSYFRNRTRPCLQYQIKRCKGPCVGLVSPEEYA 189
Query 193 QDVDNSIRFLQGDTKELNQELIAKMEEAAEQLAFEKAMFYRDRLGLLREVQAQQAVFKIK 252
+DV +S+ FL+G + L EL ME+AA +L FEKA RD++ +LR VQ QQ++
Sbjct 190 EDVRHSVMFLEGRSNALADELNVGMEQAAMRLDFEKAAELRDQVAILRRVQDQQSMEGGN 249
Query 253 GEADILAIAFQAGVTCVQIMYVRNGRMLGGKSYFPDM-LSDDLGQMLSDFIANFYFQVAD 311
G+ DI+A G CV ++ VR GR+LG K++FP + + +++G++L F+ +Y +
Sbjct 250 GDVDIVAAIVTPGGACVHLISVRGGRVLGSKNFFPQVAIEEEVGEVLLAFLGQYYLSHQE 309
Query 312 -EVPSELIVNVELPDRKELEQALQTQFDKKIQIKHKVRETRAEWQELAIMNVQHAIKGQL 370
++P+ELIVNV D L A+ ++++I ++VR TRA WQ+LA+ N + A+ +L
Sbjct 310 RDLPAELIVNVTHEDFPVLVSAIAEARGRELEISYRVRGTRARWQQLAVTNAEQALGARL 369
Query 371 SNHLELNERFHQLEQV--VGRPVDRIECFDISHTMGEATIASCVVFDQGGARKRDYRQFG 428
+N + RF L + + P R+ECFDISH+ GEAT+ASCVVF G K DYR++
Sbjct 370 ANRQHVAARFEALAEALDLAEPPQRLECFDISHSSGEATVASCVVFGPEGPLKSDYRRYN 429
Query 429 IEDITAGDDYAAMRQALTRRYKK-----HIVPDLLLIDGGKGQLHMAMEVMQTLGL-DAF 482
IE +TAGDDYAAM QALTRR+ + +PD+LL+DGGKGQL MA EV+Q L +
Sbjct 430 IEGVTAGDDYAAMHQALTRRFSRLKDGEGKMPDILLVDGGKGQLAMAQEVLQELAVAGLI 489
Query 483 MVGVSKGEGRKPGLETLHFTDGS-KIQLPEDHKALHLIQQVRDEAHRFAITKHRAKRDKR 541
++GV+KG RKPGLETL+ D S + LP D ALHLIQQ+RDEAHRFAIT HRA+R K
Sbjct 490 LLGVAKGVTRKPGLETLYLNDASHEFTLPADSPALHLIQQIRDEAHRFAITGHRARRGKA 549
Query 542 RAGSVLEVIPGLGPKRRRDLLTHFGGIQGVLKASEKELMLVSGLGPSMARTIYKILH 598
R S LE +PG+GPKRRRDLL HFGG+Q + +AS EL G+ +A IY +LH
Sbjct 550 RRTSTLEDVPGVGPKRRRDLLKHFGGLQELSRASIDELAKAPGISKKLAEQIYAVLH 606
>B7V4X6 UvrABC system protein C [Pseudomonas aeruginosa (strain
LESB58)]
Length=608
Score = 596 bits (1536), Expect = 0.0
Identities = 313/597 (52%), Positives = 416/597 (70%), Gaps = 12/597 (2%)
Query 13 LANMTQLPGVYRMLGKDGELLYVGKAKNLKNRVSSYFVKTIEHPKTQALVARIHDIETLV 72
LA + PGVYRM D +LLYVGKAK+LK R++SYF K+ PKT ALVARI +ET +
Sbjct 11 LATCSNRPGVYRMFDADAKLLYVGKAKSLKKRLASYFRKSGLAPKTAALVARIAQVETTI 70
Query 73 TRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVSSDKPYPRIASGRGKGKHQIGKF 132
T +ETEALLLEQ LIK+ RPPYNI+LRDDKSY ++F+SS+ YPR++ RG K + G++
Sbjct 71 TANETEALLLEQTLIKEWRPPYNILLRDDKSYPFVFLSSEDEYPRLSLHRGAKKRK-GRY 129
Query 133 FGPYPSAYSARDTLLVLQKLFNVRQCENSYFAQRKRPCLQYQIKRCSAPCVGLISPEDYK 192
FGPYPSA + R++L +LQK F VRQCE+SYF R RPCLQYQIKRC PCVGL+SPE+Y
Sbjct 130 FGPYPSAGAIRESLNLLQKAFLVRQCEDSYFRNRTRPCLQYQIKRCKGPCVGLVSPEEYA 189
Query 193 QDVDNSIRFLQGDTKELNQELIAKMEEAAEQLAFEKAMFYRDRLGLLREVQAQQAVFKIK 252
+DV +S+ FL+G + L EL ME+AA +L FEKA RD++ +LR VQ QQ++
Sbjct 190 EDVRHSVMFLEGRSNALADELNVGMEQAAMRLDFEKAAELRDQVAILRRVQDQQSMEGGN 249
Query 253 GEADILAIAFQAGVTCVQIMYVRNGRMLGGKSYFPDM-LSDDLGQMLSDFIANFYFQVAD 311
G+ DI+A G CV ++ VR GR+LG K++FP + + +++G++L F+ +Y +
Sbjct 250 GDVDIVAAIVTPGGACVHLISVRGGRVLGSKNFFPQVAIEEEVGEVLLAFLGQYYLSHQE 309
Query 312 -EVPSELIVNVELPDRKELEQALQTQFDKKIQIKHKVRETRAEWQELAIMNVQHAIKGQL 370
++P+ELIVNV D L A+ ++++I ++VR TRA WQ+LA+ N + A+ +L
Sbjct 310 RDLPAELIVNVTHEDFPVLVSAIAEARGRELEISYRVRGTRARWQQLAVTNAEQALGARL 369
Query 371 SNHLELNERFHQLEQV--VGRPVDRIECFDISHTMGEATIASCVVFDQGGARKRDYRQFG 428
+N + RF L + + P R+ECFDISH+ GEAT+ASCVVF G K DYR++
Sbjct 370 ANRQHVAARFEALAEALDLAEPPQRLECFDISHSSGEATVASCVVFGPEGPLKSDYRRYN 429
Query 429 IEDITAGDDYAAMRQALTRRYKK-----HIVPDLLLIDGGKGQLHMAMEVMQTLGL-DAF 482
IE +TAGDDYAAM QALTRR+ + +PD+LL+DGGKGQL MA EV+Q L +
Sbjct 430 IEGVTAGDDYAAMHQALTRRFSRLKDGEGKMPDILLVDGGKGQLAMAQEVLQELAVAGLI 489
Query 483 MVGVSKGEGRKPGLETLHFTDGS-KIQLPEDHKALHLIQQVRDEAHRFAITKHRAKRDKR 541
++GV+KG RKPGLETL+ D S + LP D ALHLIQQ+RDEAHRFAIT HRA+R K
Sbjct 490 LLGVAKGVTRKPGLETLYLNDASHEFTLPADSPALHLIQQIRDEAHRFAITGHRARRGKA 549
Query 542 RAGSVLEVIPGLGPKRRRDLLTHFGGIQGVLKASEKELMLVSGLGPSMARTIYKILH 598
R S LE +PG+GPKRRRDLL HFGG+Q + +AS EL G+ +A IY +LH
Sbjct 550 RRTSTLEDVPGVGPKRRRDLLKHFGGLQELSRASIDELAKAPGISKKLAEQIYAVLH 606
>Q9I0Q1 UvrABC system protein C [Pseudomonas aeruginosa (strain
ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228
/ 1C / PRS 101 / PAO1)]
Length=608
Score = 594 bits (1532), Expect = 0.0
Identities = 312/597 (52%), Positives = 416/597 (70%), Gaps = 12/597 (2%)
Query 13 LANMTQLPGVYRMLGKDGELLYVGKAKNLKNRVSSYFVKTIEHPKTQALVARIHDIETLV 72
LA + PGVYRM + +LLYVGKAK+LK R++SYF K+ PKT ALVARI +ET +
Sbjct 11 LATCSNRPGVYRMFDAEAKLLYVGKAKSLKKRLASYFRKSGLAPKTAALVARIAQVETTI 70
Query 73 TRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVSSDKPYPRIASGRGKGKHQIGKF 132
T +ETEALLLEQ LIK+ RPPYNI+LRDDKSY ++F+SS+ YPR++ RG K + G++
Sbjct 71 TANETEALLLEQTLIKEWRPPYNILLRDDKSYPFVFLSSEDEYPRLSLHRGAKKRK-GRY 129
Query 133 FGPYPSAYSARDTLLVLQKLFNVRQCENSYFAQRKRPCLQYQIKRCSAPCVGLISPEDYK 192
FGPYPSA + R++L +LQK F VRQCE+SYF R RPCLQYQIKRC PCVGL+SPE+Y
Sbjct 130 FGPYPSAGAIRESLNLLQKAFLVRQCEDSYFRNRTRPCLQYQIKRCKGPCVGLVSPEEYA 189
Query 193 QDVDNSIRFLQGDTKELNQELIAKMEEAAEQLAFEKAMFYRDRLGLLREVQAQQAVFKIK 252
+DV +S+ FL+G + L EL ME+AA +L FEKA RD++ +LR VQ QQ++
Sbjct 190 EDVRHSVMFLEGRSNALADELNVGMEQAAMRLDFEKAAELRDQVAILRRVQDQQSMEGGN 249
Query 253 GEADILAIAFQAGVTCVQIMYVRNGRMLGGKSYFPDM-LSDDLGQMLSDFIANFYFQVAD 311
G+ DI+A G CV ++ VR GR+LG K++FP + + +++G++L F+ +Y +
Sbjct 250 GDVDIVAAIVTPGGACVHLISVRGGRVLGSKNFFPQVAIEEEVGEVLLAFLGQYYLSHQE 309
Query 312 -EVPSELIVNVELPDRKELEQALQTQFDKKIQIKHKVRETRAEWQELAIMNVQHAIKGQL 370
++P+ELIVNV D L A+ ++++I ++VR TRA WQ+LA+ N + A+ +L
Sbjct 310 RDLPAELIVNVTHEDFPVLVSAIAEARGRELEISYRVRGTRARWQQLAVTNAEQALGARL 369
Query 371 SNHLELNERFHQLEQV--VGRPVDRIECFDISHTMGEATIASCVVFDQGGARKRDYRQFG 428
+N + RF L + + P R+ECFDISH+ GEAT+ASCVVF G K DYR++
Sbjct 370 ANRQHVAARFEALAEALDLAEPPQRLECFDISHSSGEATVASCVVFGPEGPLKSDYRRYN 429
Query 429 IEDITAGDDYAAMRQALTRRYKK-----HIVPDLLLIDGGKGQLHMAMEVMQTLGL-DAF 482
IE +TAGDDYAAM QALTRR+ + +PD+LL+DGGKGQL MA EV+Q L +
Sbjct 430 IEGVTAGDDYAAMHQALTRRFSRLKDGEGKMPDILLVDGGKGQLAMAQEVLQELAVAGLI 489
Query 483 MVGVSKGEGRKPGLETLHFTDGS-KIQLPEDHKALHLIQQVRDEAHRFAITKHRAKRDKR 541
++GV+KG RKPGLETL+ D S + LP D ALHLIQQ+RDEAHRFAIT HRA+R K
Sbjct 490 LLGVAKGVTRKPGLETLYLNDASHEFTLPADSPALHLIQQIRDEAHRFAITGHRARRGKA 549
Query 542 RAGSVLEVIPGLGPKRRRDLLTHFGGIQGVLKASEKELMLVSGLGPSMARTIYKILH 598
R S LE +PG+GPKRRRDLL HFGG+Q + +AS EL G+ +A IY +LH
Sbjct 550 RRTSTLEDVPGVGPKRRRDLLKHFGGLQELSRASIDELAKAPGISKKLAEQIYAVLH 606
>B1JB85 UvrABC system protein C [Pseudomonas putida (strain W619)]
Length=607
Score = 591 bits (1523), Expect = 0.0
Identities = 315/597 (53%), Positives = 416/597 (70%), Gaps = 13/597 (2%)
Query 13 LANMTQLPGVYRMLGKDGELLYVGKAKNLKNRVSSYFVKTIEHPKTQALVARIHDIETLV 72
LA + PGVYRM + LLYVGKAKNLK R++SYF KT PKT ALV RI +ET +
Sbjct 11 LATCSARPGVYRMFDSETRLLYVGKAKNLKKRLASYFRKTGLAPKTAALVGRIAQVETTI 70
Query 73 TRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVSSDKPYPRIASGRGKGKHQIGKF 132
T +ETEALLLEQNLIKQ RPPYNI+LRDDKSY Y+F+S D +PR+ RG K + G++
Sbjct 71 TANETEALLLEQNLIKQWRPPYNILLRDDKSYPYVFLS-DGQFPRLGIHRGAKKAK-GRY 128
Query 133 FGPYPSAYSARDTLLVLQKLFNVRQCENSYFAQRKRPCLQYQIKRCSAPCVGLISPEDYK 192
FGPYPSA + R++L +LQK F+VRQCE+SY+A R RPCLQYQIKRC PCVGL+ E+Y
Sbjct 129 FGPYPSAGAIRESLSLLQKAFSVRQCEDSYYANRTRPCLQYQIKRCKGPCVGLVDAEEYA 188
Query 193 QDVDNSIRFLQGDTKELNQELIAKMEEAAEQLAFEKAMFYRDRLGLLREVQAQQAVFKIK 252
+DV +S+ FL+G +++L EL A+ME+AA L FEKA RD++ LLR VQ QQ +
Sbjct 189 EDVRHSVMFLEGRSQQLGNELNAEMEKAAMALNFEKAAELRDQIALLRRVQDQQYMEGGS 248
Query 253 GEADILAIAFQAGVTCVQIMYVRNGRMLGGKSYFPDM-LSDDLGQMLSDFIANFYFQVAD 311
G+ D++A G CV ++ VR GR+LG K++FP + + +++ ++++ F++ +Y A+
Sbjct 249 GDVDVVAAFVNPGGACVHLISVRGGRVLGSKNFFPQVGIEEEVAEVMAAFLSQYYLGNAE 308
Query 312 -EVPSELIVNVELPDRKELEQALQTQFDKKIQIKHKVRETRAEWQELAIMNVQHAIKGQL 370
E+P ELIVNV D + +ALQT +++ I H+VR TRA WQ+LA+ N + A+ +L
Sbjct 309 RELPGELIVNVVHEDFAAISEALQTLRGRELTISHRVRGTRARWQQLAVTNAEQALNARL 368
Query 371 SNHLELNERFHQLEQVVG--RPVDRIECFDISHTMGEATIASCVVFDQGGARKRDYRQFG 428
+N + RF L +V+G R+EC+DISH+ GEAT+ASCVVF G K DYR+F
Sbjct 369 ANRQHMAARFEALAEVLGLDEVPQRLECYDISHSSGEATVASCVVFGPEGPLKSDYRRFN 428
Query 429 IEDITAGDDYAAMRQALTRRYKK-----HIVPDLLLIDGGKGQLHMAMEVMQTLGL-DAF 482
IE +TAGDDYAAM QALTRRY + +PD+LL+DGGKGQL+MA EVMQ L D
Sbjct 429 IEGVTAGDDYAAMHQALTRRYGRIKDGEGKLPDVLLVDGGKGQLNMAREVMQELAFTDLT 488
Query 483 MVGVSKGEGRKPGLETLHFTD-GSKIQLPEDHKALHLIQQVRDEAHRFAITKHRAKRDKR 541
++GV+KG RK G ETL+ D + L D+ ALHLIQQ+RDEAHRFAIT HRA+R K
Sbjct 489 LLGVAKGVTRKAGFETLYLNDVAHEFTLKGDNPALHLIQQIRDEAHRFAITGHRARRGKA 548
Query 542 RAGSVLEVIPGLGPKRRRDLLTHFGGIQGVLKASEKELMLVSGLGPSMARTIYKILH 598
R S LE + G+GPKRRRDLL HFGG+Q + +AS E+ G+ +A +IY LH
Sbjct 549 RRVSSLEDVAGVGPKRRRDLLKHFGGLQELNRASIDEIAKAPGISKKLAESIYASLH 605
>P32966 UvrABC system protein C [Pseudomonas protegens (strain
DSM 19095 / LMG 27888 / CFBP 6595 / CHA0)]
Length=607
Score = 580 bits (1495), Expect = 0.0
Identities = 310/597 (52%), Positives = 408/597 (68%), Gaps = 13/597 (2%)
Query 13 LANMTQLPGVYRMLGKDGELLYVGKAKNLKNRVSSYFVKTIEHPKTQALVARIHDIETLV 72
L+ + PGVYRM D LLYVGKAKNLK+R++SYF KT PKT ALV RI IET +
Sbjct 11 LSTCSGRPGVYRMFDSDTRLLYVGKAKNLKSRLASYFRKTGLAPKTAALVGRIAQIETTI 70
Query 73 TRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVSSDKPYPRIASGRGKGKHQIGKF 132
T +ETEALLLEQ LIK+ RPPYNI+LRDDKSY Y+F+S D +PR + RG K Q GK+
Sbjct 71 TANETEALLLEQTLIKEWRPPYNILLRDDKSYPYVFLS-DGEFPRFSIHRG-AKKQKGKY 128
Query 133 FGPYPSAYSARDTLLVLQKLFNVRQCENSYFAQRKRPCLQYQIKRCSAPCVGLISPEDYK 192
FGPYPSA + R++L +LQK F VRQCE+SY+ R RPCLQYQIKRC APCVGL+ E Y
Sbjct 129 FGPYPSAGAIRESLSLLQKTFMVRQCEDSYYKNRTRPCLQYQIKRCKAPCVGLVEAEVYA 188
Query 193 QDVDNSIRFLQGDTKELNQELIAKMEEAAEQLAFEKAMFYRDRLGLLREVQAQQAVFKIK 252
+DV +S+ FL+G + L EL A ME+AA L FEKA RD++ LLR VQ QQ++
Sbjct 189 EDVRHSVMFLEGRSNALTDELSAGMEQAASTLDFEKAAELRDQISLLRRVQDQQSMEGGS 248
Query 253 GEADILAIAFQAGVTCVQIMYVRNGRMLGGKSYFPDM-LSDDLGQMLSDFIANFYFQVAD 311
G+ D++A G CV ++ VR GR+LG K++FP + + +++ +++S F+ ++ +
Sbjct 249 GDVDVVAAFVNPGGACVHLISVRGGRVLGSKNFFPQVGIEEEVAEVMSAFLGQYFLSSPE 308
Query 312 -EVPSELIVNVELPDRKELEQALQTQFDKKIQIKHKVRETRAEWQELAIMNVQHAIKGQL 370
++PSELIVNV D L A+Q +++ I H+VR TRA WQ+LA+ N + A+ +L
Sbjct 309 RDLPSELIVNVVHEDFPALIAAIQELRGRELSISHRVRGTRARWQQLAVTNAEQALSARL 368
Query 371 SNHLELNERFHQLEQVVG--RPVDRIECFDISHTMGEATIASCVVFDQGGARKRDYRQFG 428
+N + RF L +V+ P R+EC+DISH+ GEAT+ASCVVF G K DYR++
Sbjct 369 ANRQHVAARFEALAEVLNLDEPPQRLECYDISHSSGEATVASCVVFGPEGPLKSDYRRYN 428
Query 429 IEDITAGDDYAAMRQALTRRYKK-----HIVPDLLLIDGGKGQLHMAMEVMQTLGL-DAF 482
IE +TAGDDYAAM QALTRR+ K +PD+LL+DGGKGQL MA +V+ L + D
Sbjct 429 IEGVTAGDDYAAMHQALTRRFSKLKDGEGKLPDILLVDGGKGQLSMARDVLNELAVPDLI 488
Query 483 MVGVSKGEGRKPGLETLHFTDGS-KIQLPEDHKALHLIQQVRDEAHRFAITKHRAKRDKR 541
++GV+KG RK G ETL+ D + + L D ALHLIQQ+RDEAHRFAIT HRA+R K
Sbjct 489 LLGVAKGATRKTGFETLYLNDAAHEFTLKGDSPALHLIQQIRDEAHRFAITGHRARRGKT 548
Query 542 RAGSVLEVIPGLGPKRRRDLLTHFGGIQGVLKASEKELMLVSGLGPSMARTIYKILH 598
R S LE + G+GPKRRRDLL HFGG+Q + +AS +E+ G+ +A IY LH
Sbjct 549 RRTSTLEDVAGVGPKRRRDLLKHFGGLQELSRASIEEIAKAPGISKKLAELIYANLH 605
>Q52377 UvrABC system protein C [Pseudomonas syringae pv. syringae
(strain B728a)]
Length=607
Score = 575 bits (1481), Expect = 0.0
Identities = 307/597 (51%), Positives = 410/597 (69%), Gaps = 13/597 (2%)
Query 13 LANMTQLPGVYRMLGKDGELLYVGKAKNLKNRVSSYFVKTIEHPKTQALVARIHDIETLV 72
LA + PGVYRM + LLYVGKAKNLK R++SYF KT PKT ALV+RI IET +
Sbjct 11 LATCSGRPGVYRMFDAEATLLYVGKAKNLKKRLASYFRKTGHAPKTGALVSRIAQIETTI 70
Query 73 TRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVSSDKPYPRIASGRGKGKHQIGKF 132
T +ETEALLLEQ LIK+ RPPYNI+LRDDKSY Y+F+S D +PR++ RG K + G++
Sbjct 71 TGNETEALLLEQTLIKEWRPPYNILLRDDKSYPYVFLS-DNAFPRLSIHRGTKKAK-GRY 128
Query 133 FGPYPSAYSARDTLLVLQKLFNVRQCENSYFAQRKRPCLQYQIKRCSAPCVGLISPEDYK 192
FGPYPSA + R++L +LQK F VRQCE+SYF R RPCLQYQIKRC PCVGL+ PE Y
Sbjct 129 FGPYPSAGAIRESLSLLQKTFQVRQCEDSYFKNRTRPCLQYQIKRCKGPCVGLVEPEVYA 188
Query 193 QDVDNSIRFLQGDTKELNQELIAKMEEAAEQLAFEKAMFYRDRLGLLREVQAQQAVFKIK 252
+DV +S+ FL+G + L+ EL A ME+AA L FE+A RD++ LLR VQ QQ++
Sbjct 189 EDVRHSVMFLEGRSNALSDELNASMEKAAMALDFERAAELRDQVALLRRVQDQQSMDGGT 248
Query 253 GEADILAIAFQAGVTCVQIMYVRNGRMLGGKSYFPDM-LSDDLGQMLSDFIANFYFQVAD 311
G+ D++A G CV ++ VR GR+LG K++FP + + +++G+++S F+A ++ D
Sbjct 249 GDVDVVAAFVNPGGACVHLISVRGGRVLGSKNFFPQVGIEEEVGEVMSAFLAQYFLGGID 308
Query 312 -EVPSELIVNVELPDRKELEQALQTQFDKKIQIKHKVRETRAEWQELAIMNVQHAIKGQL 370
E+P E+IVNV D A++ ++ I H+VR TRA WQ++A+ N + A+ +L
Sbjct 309 RELPGEVIVNVINDDFPAFVDAVEELRGVEMVISHRVRGTRARWQQMAVTNAEQALTARL 368
Query 371 SNHLELNERFHQLEQVVG--RPVDRIECFDISHTMGEATIASCVVFDQGGARKRDYRQFG 428
+N + RF L +V+G P R+EC+DISH+ GEAT+ASCVVF G K DYR+F
Sbjct 369 ANRQHVASRFEALAKVLGLEDPPMRLECYDISHSSGEATVASCVVFGPEGPIKSDYRRFN 428
Query 429 IEDITAGDDYAAMRQALTRRYKK-----HIVPDLLLIDGGKGQLHMAMEVMQTLGL-DAF 482
IE +TAGDDYAAM QALTRRY + +PD+LL+DGGKGQ+ MA +V+ L + +
Sbjct 429 IEGVTAGDDYAAMHQALTRRYSRIKAGEGKLPDVLLVDGGKGQMSMARDVLNELQVPELI 488
Query 483 MVGVSKGEGRKPGLETLHFTDGS-KIQLPEDHKALHLIQQVRDEAHRFAITKHRAKRDKR 541
++GV+KG RK G ETL+ D + + LP D ALHLIQQ+RDEAHRFAIT HRA+R K
Sbjct 489 LLGVAKGTTRKAGFETLYLNDSAHEFTLPGDSPALHLIQQIRDEAHRFAITGHRARRGKT 548
Query 542 RAGSVLEVIPGLGPKRRRDLLTHFGGIQGVLKASEKELMLVSGLGPSMARTIYKILH 598
R S LE + G+GP RRRDLL HFGG+Q + +AS E+ G+ +A +IY LH
Sbjct 549 RRTSTLEGVAGVGPTRRRDLLKHFGGLQELSRASIDEIAKAPGISKKLAESIYANLH 605
>O66041 UvrABC system protein C [Salmonella typhimurium (strain
LT2 / SGSC1412 / ATCC 700720)]
Length=610
Score = 508 bits (1309), Expect = 1e-177
Identities = 275/597 (46%), Positives = 384/597 (64%), Gaps = 17/597 (3%)
Query 13 LANMTQLPGVYRMLGKDGELLYVGKAKNLKNRVSSYFVKTIEHPKTQALVARIHDIETLV 72
L +T PGVYRM G ++YVGKAK+LK R+SSYF + KT+ALVA+I I+ V
Sbjct 11 LKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALVAQIQHIDVTV 70
Query 73 TRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVSSDKPYPRIASGRGKGKHQIGKF 132
T +ETEALLLE N IK ++P YN++LRDDKSY +IF+S D +PR+A RG KH G++
Sbjct 71 THTETEALLLEHNYIKLYQPRYNVLLRDDKSYPFIFLSGD-THPRLAMHRG-AKHAKGEY 128
Query 133 FGPYPSAYSARDTLLVLQKLFNVRQCENSYFAQRKRPCLQYQIKRCSAPCV-GLISPEDY 191
FGP+P+ Y+ R+TL +LQK+F +RQCENS + R RPCLQYQI RC PCV GL+S E+Y
Sbjct 129 FGPFPNGYAVRETLALLQKIFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVAGLVSEEEY 188
Query 192 KQDVDNSIRFLQGDTKELNQELIAKMEEAAEQLAFEKAMFYRDRLGLLREVQAQQAVFKI 251
Q V+ FL G ++ +LIA+ME+A++ LAFE+A RD++ +R V +Q V
Sbjct 189 AQQVEYVRLFLSGKDDQVLTQLIARMEKASQDLAFEEAARIRDQIQAVRRVTEKQFVSNA 248
Query 252 KGEADILAIAFQAGVTCVQIMYVRNGRMLGGKSYFPDML-SDDLGQMLSDFIANFYFQVA 310
+ D++ +AF AG+ CV ++++R G++LG +SYFP + +LG+++ F+ FY Q +
Sbjct 249 GDDLDVIGVAFDAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELGEVVETFVGQFYLQGS 308
Query 311 D--EVPSELIVNVELPDRKELEQALQTQFDKKIQIKHKVRETRAEWQELAIMNVQHAIKG 368
+P E++++ L D+ L +L ++I ++ K R RA + +LA N A+
Sbjct 309 QMRTLPGEILLDFNLSDKTLLADSLSELAGRRIHVQTKPRGDRARYLKLARTNAATALIT 368
Query 369 QLSNHLELNERFHQLEQVVGRP-VDRIECFDISHTMGEATIASCVVFDQGGARKRDYRQF 427
+LS + +R L V+ P + R+ECFDISHTMGE T+ASCVVFD G + +YR++
Sbjct 369 KLSQQSTITQRLSALAAVLKLPAIKRMECFDISHTMGEQTVASCVVFDANGPLRAEYRRY 428
Query 428 GIEDITAGDDYAAMRQALTRRYKKHI----VPDLLLIDGGKGQLHMAMEVMQTLGLD--- 480
I IT GDDYAAM Q L RRY K I +PD++LIDGGKGQL A V L +
Sbjct 429 NIAGITPGDDYAAMNQVLRRRYGKAIEESKIPDVILIDGGKGQLAQAKAVFAELDVPWDK 488
Query 481 --AFMVGVSKGEGRKPGLETLHF-TDGSKIQLPEDHKALHLIQQVRDEAHRFAITKHRAK 537
++GV+KG RK GLETL F +G LP D ALH+IQ +RDE+H AI HR K
Sbjct 489 HRPLLLGVAKGADRKAGLETLFFEPEGEGFSLPPDSPALHVIQHIRDESHDHAIGGHRKK 548
Query 538 RDKRRAGSVLEVIPGLGPKRRRDLLTHFGGIQGVLKASEKELMLVSGLGPSMARTIY 594
R K + S LE I G+GPKRR+ LL + GG+QG+ AS +E+ V G+ +A I+
Sbjct 549 RAKVKNTSTLETIEGVGPKRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGLAEKIF 605
>P0A8G0 UvrABC system protein C [Escherichia coli (strain K12)]
Length=610
Score = 506 bits (1302), Expect = 1e-176
Identities = 274/597 (46%), Positives = 382/597 (64%), Gaps = 17/597 (3%)
Query 13 LANMTQLPGVYRMLGKDGELLYVGKAKNLKNRVSSYFVKTIEHPKTQALVARIHDIETLV 72
L +T PGVYRM G ++YVGKAK+LK R+SSYF + KT+ALVA+I I+ V
Sbjct 11 LKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALVAQIQQIDVTV 70
Query 73 TRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVSSDKPYPRIASGRGKGKHQIGKF 132
T +ETEALLLE N IK ++P YN++LRDDKSY +IF+S D +PR+A RG KH G++
Sbjct 71 THTETEALLLEHNYIKLYQPRYNVLLRDDKSYPFIFLSGD-THPRLAMHRG-AKHAKGEY 128
Query 133 FGPYPSAYSARDTLLVLQKLFNVRQCENSYFAQRKRPCLQYQIKRCSAPCV-GLISPEDY 191
FGP+P+ Y+ R+TL +LQK+F +RQCENS + R RPCLQYQI RC PCV GL+S E+Y
Sbjct 129 FGPFPNGYAVRETLALLQKIFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVEGLVSEEEY 188
Query 192 KQDVDNSIRFLQGDTKELNQELIAKMEEAAEQLAFEKAMFYRDRLGLLREVQAQQAVFKI 251
Q V+ FL G ++ +LI++ME A++ L FE+A RD++ +R V +Q V
Sbjct 189 AQQVEYVRLFLSGKDDQVLTQLISRMETASQNLEFEEAARIRDQIQAVRRVTEKQFVSNT 248
Query 252 KGEADILAIAFQAGVTCVQIMYVRNGRMLGGKSYFPDML-SDDLGQMLSDFIANFYFQVA 310
+ D++ +AF AG+ CV ++++R G++LG +SYFP + +L +++ F+ FY Q +
Sbjct 249 GDDLDVIGVAFDAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELSEVVETFVGQFYLQGS 308
Query 311 D--EVPSELIVNVELPDRKELEQALQTQFDKKIQIKHKVRETRAEWQELAIMNVQHAIKG 368
+P E++++ L D+ L +L +KI ++ K R RA + +LA N A+
Sbjct 309 QMRTLPGEILLDFNLSDKTLLADSLSELAGRKINVQTKPRGDRARYLKLARTNAATALTS 368
Query 369 QLSNHLELNERFHQLEQVVGRP-VDRIECFDISHTMGEATIASCVVFDQGGARKRDYRQF 427
+LS +++R L V+ P V R+ECFDISHTMGE T+ASCVVFD G + +YR++
Sbjct 369 KLSQQSTVHQRLTALASVLKLPEVKRMECFDISHTMGEQTVASCVVFDANGPLRAEYRRY 428
Query 428 GIEDITAGDDYAAMRQALTRRYKKHI----VPDLLLIDGGKGQLHMAMEVMQTLGLD--- 480
I IT GDDYAAM Q L RRY K I +PD++LIDGGKGQL A V L +
Sbjct 429 NITGITPGDDYAAMNQVLRRRYGKAIDDSKIPDVILIDGGKGQLAQAKNVFAELDVSWDK 488
Query 481 --AFMVGVSKGEGRKPGLETLHF-TDGSKIQLPEDHKALHLIQQVRDEAHRFAITKHRAK 537
++GV+KG RK GLETL F +G LP D ALH+IQ +RDE+H AI HR K
Sbjct 489 NHPLLLGVAKGADRKAGLETLFFEPEGEGFSLPPDSPALHVIQHIRDESHDHAIGGHRKK 548
Query 538 RDKRRAGSVLEVIPGLGPKRRRDLLTHFGGIQGVLKASEKELMLVSGLGPSMARTIY 594
R K + S LE I G+GPKRR+ LL + GG+QG+ AS +E+ V G+ +A I+
Sbjct 549 RAKVKNTSSLETIEGVGPKRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGLAEKIF 605
>P73580 UvrABC system protein C [Synechocystis sp. (strain PCC
6803 / Kazusa)]
Length=626
Score = 361 bits (927), Expect = 3e-120
Identities = 226/615 (37%), Positives = 353/615 (57%), Gaps = 34/615 (6%)
Query 9 IEKILANMTQLPGVYRMLGKDGELLYVGKAKNLKNRVSSYFVKTIEHPKTQAL-VARIHD 67
+E+ L + Q PGVY M + GE+LY+GKAK L+ RV SYF + H AL V ++ +
Sbjct 17 LERRLQEIPQEPGVYFMGDRQGEILYIGKAKKLRTRVRSYFRDSQPHTARIALMVQQVAE 76
Query 68 IETLVTRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVSSDKPYPRIASGRGKGKH 127
IE +VT +E EAL LE NLIKQH+P +N++L+DDK Y Y+ ++ + YPRI R + +
Sbjct 77 IEFIVTDTEAEALALEANLIKQHQPHFNVLLKDDKKYPYVCITWSETYPRIFITRKRRLN 136
Query 128 QI-GKFFGPYPSAYSARDTLLVLQKLFNVRQCENSYFAQRKRPCLQYQIKRCSAPCVGLI 186
Q +++GPY ++S R TL ++Q++F +RQ F + RPCL Y I RC C LI
Sbjct 137 QAKDRYYGPYVDSFSLRQTLRLIQRIFPLRQRRQPLF--KHRPCLNYDIGRCPGVCQELI 194
Query 187 SPEDYKQDVDNSIRFLQGDTKELNQELIAKMEEAAEQLAFEKAMFYRDRLGLLREVQAQQ 246
+PEDY+Q + QG T+EL+Q L +ME+AA L FE+A RD++ L ++ A Q
Sbjct 195 TPEDYRQTLQKVAMVFQGRTQELHQLLTQQMEKAAADLKFEQAALIRDQINSLGKLNADQ 254
Query 247 AVFKIKG--EADILAIAFQAGVTCVQIMYVRNGRMLGGKSYFPDMLSDDL--GQMLSDFI 302
V + D +A+A ++ +Q+ +R GR++G +F D + +L G++L +
Sbjct 255 KVSLPQDTISRDAIAVASDGQISAIQLFQIRAGRLVGRLGFFADGVESELEKGEVLQRVL 314
Query 303 ANFYFQV-ADEVPSELIVNVELPDRKELEQALQTQFDKKIQIKHKVRETRAEWQELAIMN 361
Y QV A E+PSE+I+ LPD + L L +Q +K+ R+T+AE E+ N
Sbjct 315 EQHYQQVEAVEIPSEVILPCALPDGELLNDWLTSQRGRKVTFNLPQRQTKAELLEMVERN 374
Query 362 VQHAIKG---QLSNHLELNERFHQLEQVVGRPVDRIECFDISHTMGEATIASCVVFDQGG 418
Q+ ++ Q + ++ E ++ + P RIE +DISH G +AS VVF G
Sbjct 375 AQYELERLQKQTAKNVTALEDLAEILNLETLP-KRIEGYDISHIQGSNAVASQVVFIDGV 433
Query 419 ARKRDYRQFGIED----ITAGDDYAAMRQALTRRYKKHIV--------PDLLLIDGGKGQ 466
++ YR + I++ + DD+A++ + + RR++ + PDL++IDGGKGQ
Sbjct 434 PAQQYYRHYKIKNPSIKVGHSDDFASLAEVIIRRFQSSVKGKKNQQDWPDLIMIDGGKGQ 493
Query 467 LHMAMEVMQTLGL-DAFMVGVSKGEGRKPGLETLHFTDGSKIQLPE--DHKALHLIQQVR 523
L ++V++ + L D F V VS + R+ F G LP + + L++++R
Sbjct 494 LSAVVKVLKKMDLLDKFTV-VSLAKQREE-----IFLPGESQPLPTHAEQPGVQLLRRLR 547
Query 524 DEAHRFAITKHRAKRDKRRAGSVLEVIPGLGPKRRRDLLTHFGGIQGVLKASEKELMLVS 583
DEAHRFA++ HR +R + S L+ IPGLG R++ LL HF + + +AS K+L V
Sbjct 548 DEAHRFAVSFHRQQRLSKSRRSRLDEIPGLGFSRQKQLLAHFRSLDYIREASVKQLQEVP 607
Query 584 GLGPSMARTIYKILH 598
G+GP +A+TIY H
Sbjct 608 GIGPQLAQTIYDYFH 622
>P14951 UvrABC system protein C [Bacillus subtilis (strain 168)]
Length=590
Score = 335 bits (859), Expect = 2e-110
Identities = 215/607 (35%), Positives = 348/607 (57%), Gaps = 37/607 (6%)
Query 9 IEKILANMTQLPGVYRMLGKDGELLYVGKAKNLKNRVSSYFVKTIEHPKTQALVARIHDI 68
+++ LA + PG Y M + ++YVGKAK LKNRV SYF + + KTQ LV I D
Sbjct 5 LKEKLALLPDQPGCYLMKDRQQTVIYVGKAKVLKNRVRSYFTGSHD-AKTQRLVTEIEDF 63
Query 69 ETLVTRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVSSDKPYPRIASGRGKGKHQ 128
E +VT S EAL+LE NLIK+H P YN+ML+DDK+Y +I ++ ++ +PR+ R K +
Sbjct 64 EYIVTSSNLEALILEMNLIKKHDPKYNVMLKDDKTYPFIKLTHER-HPRLIVTRNVKKDK 122
Query 129 IGKFFGPYPSAYSARDTLLVLQKLFNVRQCENSYFAQRKRPCLQYQIKRCSAPCVGLISP 188
G++FGPYP+ +AR+T +L +L+ +R+C R CL Y + +C APCV IS
Sbjct 123 -GRYFGPYPNVQAARETKKLLDRLYPLRKCSK----LPDRVCLYYHLGQCLAPCVKDISE 177
Query 189 EDYKQDVDNSIRFLQGDTKELNQELIAKMEEAAEQLAFEKAMFYRDRLGLLRE-VQAQQA 247
E ++ V++ RFL+G E+ +EL KM EAAE L FE+A RD++ + ++ Q+
Sbjct 178 ETNRELVESITRFLRGGYNEVKKELEEKMHEAAENLEFERAKELRDQIAHIESTMEKQKM 237
Query 248 VFKIKGEADILAIAFQAGVTCVQIMYVRNGRML-GGKSYFPDMLSDDLGQMLSDFIANFY 306
+ D+ A A+ G CVQ+ ++R G+++ S FP L + + FI FY
Sbjct 238 TMNDLVDRDVFAYAYDKGWMCVQVFFIRQGKLIERDVSMFP--LYQEADEEFLTFIGQFY 295
Query 307 FQVADEVPSELIVNVELPDRKELEQALQTQFDKKIQIKHKVRETRAEWQELAIMNVQHAI 366
+ +P E++V + D+ +EQ L+T + + + E LA N + A+
Sbjct 296 SKNNHFLPKEILVPDSI-DQSMIEQLLET------NVHQPKKGPKKELLMLAHKNAKIAL 348
Query 367 KGQLSNHLELNERFHQLEQVVGRPVD-----RIECFDISHTMGEATIASCVVFDQGGARK 421
K + S ER Q +G ++ RIE FD S+ G +++ +VF G K
Sbjct 349 KEKFSLIERDEERSIGAVQKLGEALNIYTPHRIEAFDNSNIQGTNPVSAMIVFIDGKPYK 408
Query 422 RDYRQFGIEDITAGDDYAAMRQALTRRYKKHI-----VPDLLLIDGGKGQLHMAMEVMQT 476
++YR++ I+ +T DDY +MR+ + RRY + + +PDL++IDGGKGQ++ A +V++
Sbjct 409 KEYRKYKIKTVTGPDDYGSMREVVRRRYTRVLRENLPLPDLIIIDGGKGQINAARDVIEN 468
Query 477 -LGLDAFMVGVSKGEGRKPGLETLHFTDGSKIQ---LPEDHKALHLIQQVRDEAHRFAIT 532
LGLD + G++K E + T + G ++ L + + +L+Q+++DE HRFAI+
Sbjct 469 ELGLDIPIAGLAKDEKHR----TSNLLIGDPLEVAYLERNSQEFYLLQRIQDEVHRFAIS 524
Query 533 KHRAKRDKRRAGSVLEVIPGLGPKRRRDLLTHFGGIQGVLKASEKELMLVSGLGPSMART 592
HR R K SVL+ IPG+G KR++ LL HFG ++ + +AS +++ +G+ + A+
Sbjct 525 FHRQIRGKSAFQSVLDDIPGIGEKRKKMLLKHFGSVKKMKEASLEDIK-KAGVPAAAAQL 583
Query 593 IYKILHE 599
+Y L +
Sbjct 584 LYDKLQK 590
>O84898 UvrABC system protein C [Mycoplasmopsis bovis (strain
ATCC 25523 / DSM 22781 / NCTC 10131 / PG45)]
Length=571
Score = 161 bits (408), Expect = 9e-46
Identities = 160/594 (27%), Positives = 269/594 (45%), Gaps = 75/594 (13%)
Query 12 ILANMTQLPGVYRMLGKDGELLYVGKAKNLKNRVSSYFVKTIEHPKTQALVARIHDIETL 71
+L N++ PGVY +LYVGKAKNL+ R+ YF I KT LV+ I+D +
Sbjct 9 MLKNVSTSPGVYLWKDAKQNVLYVGKAKNLRKRMLQYFDGAINSYKTNKLVSLIYDFDVY 68
Query 72 VTRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVSSDKPYPRI-ASGRGKGKHQIG 130
+ ++ EALLLE+ +I ++ P +NI+L DD+ Y Y+ V K I S + K
Sbjct 69 ICKTNKEALLLEKAMIDRYNPEFNILLLDDRKYPYLKVQLLKDSLLINLSRKVNAKDSKN 128
Query 131 KFF-GPYPSAYSARDTLLVLQKLFNVRQCENSYFAQRKRPCLQYQIKRCSAPCVGLISPE 189
F+ GP+PS Y A+ L +LQ + EN LI +
Sbjct 129 TFYYGPFPSGYGAKPILKLLQ---HETLYENGL----------------------LIKNK 163
Query 190 DYKQDVD--NSIR-FLQGDTKELNQELIAKMEEAAEQLAFEKAMFYRDRLGLLREVQAQQ 246
DY ++ N I+ L EL KM +AA + FE A+F RD L L++++ Q
Sbjct 164 DYNFWINQFNKIKEILSFKNNNYINELTNKMHQAANNMQFELALFLRDGLTYLKKLKESQ 223
Query 247 AV-FKIKGEADILAIAFQAGVTCVQIMYVRNGRMLGGKSYFPDMLSDDLGQMLSDFIANF 305
+ D+ A + +++ R G ++ + L+ LG + + + F
Sbjct 224 IIELSQYKNIDVFAYKTDEKLIFATVLFYRYGILINKVN-----LTIPLGLSVDESLRVF 278
Query 306 YFQVADE--VPSELIVNVELPDRKELEQALQTQFDKKIQIKHKVRE----TRAEWQELAI 359
+ Q ++ +P LIV EL FD + ++K T + +LAI
Sbjct 279 FEQFYEDKILPDNLIVQEEL-----------LNFDLNLSSEYKFISPKIGTNKKVLDLAI 327
Query 360 MNVQH-------AIKGQL---SNHLELNERFHQLEQVVGRPVDRIECFDISHTMGEATIA 409
+N+ IK QL SN L+ ++ L ++ I FD S+ +
Sbjct 328 LNLNDYYEKEHLVIKNQLDKASNMLDSLNKYLNLPKL-----KNIVVFDNSNINNINPVG 382
Query 410 SCVVFDQGGARKRDYRQFGIEDITAGD-DYAAMRQALTRRYKKHIVP---DLLLIDGGKG 465
+V+ G K YR+F +E + D ++Q++++ + + DL++ DGG
Sbjct 383 VAIVYTNGIKNKSLYRKFNLEALNERSADVEYIKQSISKFFSSNKNTKDYDLVIADGGIQ 442
Query 466 QLHMAMEVMQTLGLDAFMVGVSKGEGRKPGLETLHFTDGSKIQLPEDHKALHLIQQVRDE 525
Q++ A + ++TL ++ ++G+ K E K + L D ++I + D + + + Q++ E
Sbjct 443 QVNEAKKTLKTLNINIPVIGLVKNEFHKT--KALIDLDMNEIHI-NDLELYNYLVQIQVE 499
Query 526 AHRFAITKHRAKRDKRRAGSVLEVIPGLGPKRRRDLLTHFGGIQGVLKASEKEL 579
RFA + R ++ L I GLGP ++LL HF + AS +EL
Sbjct 500 VDRFAKSHFRNRQKISSLEGKLRNIKGLGPNMEQNLLNHFKSYAKIYDASVEEL 553
>O84899 UvrABC system protein C [Mycoplasmopsis agalactiae (strain
NCTC 10123 / CIP 59.7 / PG2)]
Length=571
Score = 147 bits (371), Expect = 8e-41
Identities = 156/589 (26%), Positives = 263/589 (45%), Gaps = 67/589 (11%)
Query 13 LANMTQLPGVYRMLGKDGELLYVGKAKNLKNRVSSYFVKTIEHPKTQALVARIHDIETLV 72
L N + PGVY +LYVGKAKNL+ R+ YF I KT L++ + D E +
Sbjct 10 LKNTSTSPGVYLWKDAKQNVLYVGKAKNLRKRLLQYFDGAINSYKTSKLMSLVADFEVYI 69
Query 73 TRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVSSDKPYPRIASGRGKGKHQIGK- 131
++ EALLLE+ ++ + P +NI+L DD+ Y Y+ V K I R K + K
Sbjct 70 CKTNKEALLLEKAMVDRFNPEFNILLLDDRKYPYLKVQLLKDSLLITLSR-KVNTKYTKN 128
Query 132 --FFGPYPSAYSARDTLLVLQ--KLFN----VRQCENSYFAQRKRPCLQYQIKRCSAPCV 183
++GP+PS Y A+ L +LQ L+ ++ ++S++ + +IK
Sbjct 129 TLYYGPFPSGYGAKPILKLLQHEALYESGLLIKNNDSSFWVNQFA-----KIK------- 176
Query 184 GLISPEDYKQDVDNSIRFLQGDTKELNQELIAKMEEAAEQLAFEKAMFYRDRLGLLREVQ 243
L EL KM AA + FE A+F RD L L++++
Sbjct 177 ----------------EILSFKNNNYLNELTNKMHTAANNMQFELALFLRDGLTYLKKLK 220
Query 244 AQQAV-FKIKGEADILAIAFQAGVTCVQIMYVRNGRMLGGKSYFPDMLSDDLGQMLSDFI 302
Q + D+ A + +++ R G ++ + L+ LG + + I
Sbjct 221 ESQIIELSQYKNIDVFAYKTDEKLIYATVLFYRYGVLINKVN-----LTIPLGISIDESI 275
Query 303 ANFYFQ-VADEV-PSELIVNVELPDRKELEQALQTQFDKKIQIKHKVRETRAEWQELAIM 360
F+ Q AD++ P IV E+ L+ L D K I K+ T + +LA++
Sbjct 276 RVFFEQFYADKILPDNFIVQEEI-----LKYDLNLSSDYKF-ISPKI-GTNKKVLDLALL 328
Query 361 NVQHAIKGQ---LSNHLE-LNERFHQLEQVVGRP-VDRIECFDISHTMGEATIASCVVFD 415
N+ + + + N LE + L + + P + I FD S+ + +V+
Sbjct 329 NLNDYYEKEHLIMQNQLEKADSMLSSLNKYLNLPKLKNIVIFDNSNINNINPVGVAIVYT 388
Query 416 QGGARKRDYRQFGIEDIT-AGDDYAAMRQALTRRY---KKHIVPDLLLIDGGKGQLHMAM 471
G K YR+F +E ++ D +RQ++T+ + K DL++ DGG Q++ A
Sbjct 389 NGIKNKSLYRKFNLEALSYRSADVDYIRQSITKFFSSDKNTKDFDLIITDGGLQQVNEAK 448
Query 472 EVMQTLGLDAFMVGVSKGEGRKPGLETLHFTDGSKIQLPEDHKALH-LIQQVRDEAHRFA 530
+ ++ LG++ ++G+ K E K T D + ++ + LH + Q++ E RFA
Sbjct 449 KTLKVLGINIPVIGLVKNEYHK----TRALIDLNLNEIYVNDLELHNYLAQIQIEVDRFA 504
Query 531 ITKHRAKRDKRRAGSVLEVIPGLGPKRRRDLLTHFGGIQGVLKASEKEL 579
+ R ++ L I GLG + LL HF + AS +EL
Sbjct 505 KSHFRNRQKISSLEGKLRNIKGLGHNMEQKLLNHFKSYAKIYDASVEEL 553
>P76213 Excinuclease cho [Escherichia coli (strain K12)]
Length=295
Score = 62.8 bits (151), Expect = 1e-13
Identities = 53/201 (26%), Positives = 94/201 (47%), Gaps = 14/201 (7%)
Query 8 HIEKILANMTQLPGVYRMLGKDGEL-LYVGKAKNLKNRVSSYFVKTIEHPKTQALVARIH 66
H+ L ++ PGVY G+ + LY+GK+ N+++RV S+ + P A++ +
Sbjct 23 HLRSFLNDLPTRPGVYLFHGESDTMPLYIGKSVNIRSRVLSH----LRTPDEAAMLRQSR 78
Query 67 DIETLVTRSETEALLLEQNLIKQHRPPYNIMLRDDKSYVYIFVSSDKPYPRIASGRGKGK 126
I + T E ALLLE LIK+ +P +N LR ++ + ++ + + +
Sbjct 79 RISWICTAGEIGALLLEARLIKEQQPLFNKRLRRNRQLCALQLNEKR--VDVVYAKEVDF 136
Query 127 HQIGKFFGPYP---SAYSARDTLLVLQKL-FNVRQCENSYFAQRKRPCLQYQIKRCSAPC 182
+ FG + +A A T+ QKL + + E R R C + +KRC+ C
Sbjct 137 SRAPNLFGLFANRRAALQALQTIADEQKLCYGLLGLEP---LSRGRACFRSALKRCAGAC 193
Query 183 VGLISPEDYKQDVDNSIRFLQ 203
G S E++ + S+ L+
Sbjct 194 CGKESHEEHALRLRQSLERLR 214
>P07992 DNA excision repair protein ERCC-1 [Homo sapiens]
Length=297
Score = 43.1 bits (100), Expect = 3e-07
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 0/58 (0%)
Query 542 RAGSVLEVIPGLGPKRRRDLLTHFGGIQGVLKASEKELMLVSGLGPSMARTIYKILHE 599
R L + + + LLT FG ++ ++ AS ++L L GLGP AR ++ +LHE
Sbjct 234 RVTECLTTVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKARRLFDVLHE 291
Lambda K H a alpha
0.322 0.138 0.400 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 5876906
Database: 75b0f0f2ce11bd5fdac939c0a5e3e1bf.SwissProt.fasta
Posted date: Jun 2, 2024 10:36 AM
Number of letters in database: 12,061
Number of sequences in database: 21
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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