BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 3384562fdc36209ea8f047cbeb28028a.SwissProt.fasta
           1 sequences; 305 total letters



Query= ACIAD0358

Length=306
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

O32256 Uncharacterized transporter YvbV [Bacillus subtilis (strai...  45.8    3e-10


>O32256 Uncharacterized transporter YvbV [Bacillus subtilis (strain 
168)]
Length=305

 Score = 45.8 bits (107),  Expect = 3e-10
 Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 14/137 (10%)

Query  146  HVSFGVGDLLFVMSAICWGVFTVLLKQWKLSAWHSMASVAIWSAVIYLP---VYLL---F  199
            H+S  +G LL + SA+ W + TV +K+            +IW   + L    V+LL   F
Sbjct  147  HISV-IGVLLALGSAVSWALGTVYMKKT------GSRVDSIWMVALQLTIGSVFLLISGF  199

Query  200  FPKHFTGVNPIHLMIQGV-FHGVFVVIISTLAYIAAIERLGAFKTGSIVTLAPFIAAVVA  258
            + + F+ +      I  + F  VFV+ +  L +   +    A K  S   L P I+ V +
Sbjct  200  WTESFSAIQWTAPFITSLLFISVFVIALGWLVFFTLVGSGEASKVASYTFLIPLISIVAS  259

Query  259  VPLLNEPLSASIICGLI  275
               L+EPL+ S++ GL+
Sbjct  260  SIFLHEPLTLSLLAGLL  276


 Score = 15.4 bits (28),  Expect = 1.8
 Identities = 9/29 (31%), Positives = 17/29 (59%), Gaps = 0/29 (0%)

Query  269  SIICGLIGMGIGALQPWRWRLKDTLTIEL  297
            ++I GL+ + +   +  + RLK+T  I L
Sbjct  44   TLIGGLLLVIVALPRIHKLRLKETWPIYL  72



Lambda      K        H        a         alpha
   0.335    0.145    0.485    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 77562


  Database: 3384562fdc36209ea8f047cbeb28028a.SwissProt.fasta
    Posted date:  May 20, 2024  12:00 PM
  Number of letters in database: 305
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40