BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 982e2967c5ea2168f8ce44424032d804.SwissProt.fasta
           14 sequences; 3,337 total letters



Query= ACIAD0388

Length=236
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

P33128 Probable fimbrial chaperone YadV [Escherichia coli (strain...  171     1e-56
P45991 Chaperone protein HifB [Haemophilus influenzae]                160     2e-52
P35757 Chaperone protein HifB [Haemophilus influenzae]                155     1e-50
P21646 Chaperone protein MrkB [Klebsiella pneumoniae]                 147     1e-47
P33409 Chaperone protein FimB/FhaD [Bordetella pertussis (strain ...  139     3e-44
P33342 Probable fimbrial chaperone YehC [Escherichia coli (strain...  134     2e-42
P62610 Chaperone protein FocC [Escherichia coli O6:H1 (strain CFT...  120     3e-37
P62609 Chaperone protein FocC [Escherichia coli]                      120     3e-37
Q8X5K6 Probable fimbrial chaperone LpfB [Escherichia coli O157:H7]    113     2e-34
P59590 Chaperone protein FimC [Escherichia coli O6:H1 (strain CFT...  112     5e-34
P31697 Chaperone protein FimC [Escherichia coli (strain K12)]         110     3e-33
P43661 Chaperone protein LpfB [Salmonella typhimurium (strain LT2...  107     3e-32
P53520 Chaperone protein PmfD [Proteus mirabilis (strain HI4320)]     107     1e-31
P15319 Chaperone protein PapD [Escherichia coli]                      106     1e-31


>P33128 Probable fimbrial chaperone YadV [Escherichia coli (strain 
K12)]
Length=246

 Score = 171 bits (433),  Expect = 1e-56
 Identities = 89/227 (39%), Positives = 147/227 (65%), Gaps = 8/227 (4%)

Query  8    ISILLLSQYTNAGVSIDGTRIIFPSNAKSVSVQLRNGFATPALVQTWIDQGDMSSIPAAD  67
            ++ +  S  + A + I GTR+I+ S+ KSV+V+L N    P LVQ+W+D GD ++ P + 
Sbjct  14   VTCMAFSSSSIADIVISGTRVIYKSDQKSVNVRLENKGNNPLLVQSWLDTGDDNAEPGSI  73

Query  68   QIPFVLTPPLSRVEAKKGQIIRIIPTGSPALPQDRESLYWFNMLDIPPEDSANK--DKNI  125
             +PF  TPP+SR++AK+GQ I+++ T S +LP+DRES++WFN+L++PP+  A K  ++++
Sbjct  74   TVPFTATPPVSRIDAKRGQTIKLMYTASTSLPKDRESVFWFNVLEVPPKPDAEKVANQSL  133

Query  126  LTFNVRSRIKLFYRPTGLKMSSDKAFASVG--YSYNNGTQAVTLNNPTPYFVTVTKVDFK  183
            L    R+RIKLFYRP GLK +  +A  ++   +S + G  ++ + NPTPY+V+ +  D  
Sbjct  134  LQLAFRTRIKLFYRPDGLKGNPSEAPLALKWFWSGSEGKASLRVTNPTPYYVSFSSGDL-  192

Query  184  NQSQTASYNADVVMLAPFSQQIL--NKFQLKFKPDQMNYTIINDLGG  228
             ++    Y  DV M+APFS +++  N    K    ++++  IND GG
Sbjct  193  -EASGKRYPIDVKMIAPFSDEVMKVNGLNGKANSAKVHFYAINDFGG  238


>P45991 Chaperone protein HifB [Haemophilus influenzae]
Length=241

 Score = 160 bits (405),  Expect = 2e-52
 Identities = 93/233 (40%), Positives = 139/233 (60%), Gaps = 11/233 (5%)

Query  4    FSFIISILLLSQYTNAGVSIDGTRIIFPSNAKSVSVQLRNGFATPALVQTWIDQGDMSSI  63
            F+ +    L +   NA V I GTR+I+P+  K+V V+L N   + ALVQ WID G+ ++ 
Sbjct  13   FTALFFAALCAFSANADVIITGTRVIYPAGQKNVIVKLENNDDSAALVQAWIDNGNPNAD  72

Query  64   PAADQIPFVLTPPLSRVEAKKGQIIRIIPTGSPALPQDRESLYWFNMLDIPPEDSA---N  120
            P   + PFV+TPP++RVEAK GQ +RI  TGS  LP DRESL++FN+LDIPP+  A    
Sbjct  73   PKYTKTPFVITPPVARVEAKSGQSLRITFTGSEPLPDDRESLFYFNLLDIPPKPDAAFLA  132

Query  121  KDKNILTFNVRSRIKLFYRPTGLKMSSDKAFASVGYSYNNGTQAVTLNNPTPYFVTVTKV  180
            K  + +   +RSR+KLFYRP  L M S  A   V +      + V ++N TPY++    +
Sbjct  133  KHGSFMQIAIRSRLKLFYRPAKLSMDSRDAMKKVVFKAT--PEGVLVDNQTPYYMNY--I  188

Query  181  DFKNQSQTASYNADVVMLAPFSQQILNKFQLKFKPDQMNYTIINDLGGNQTFE  233
               +Q++ A    +V M+APFSQ +     ++   D++ + ++ND G +Q  E
Sbjct  189  GLLHQNKPAK---NVKMVAPFSQAVFEAKGVR-SGDKLKWVLVNDYGADQEGE  237


>P35757 Chaperone protein HifB [Haemophilus influenzae]
Length=241

 Score = 155 bits (393),  Expect = 1e-50
 Identities = 90/230 (39%), Positives = 137/230 (60%), Gaps = 11/230 (5%)

Query  4    FSFIISILLLSQYTNAGVSIDGTRIIFPSNAKSVSVQLRNGFATPALVQTWIDQGDMSSI  63
            F+ +    L +   NA V I GTR+I+P+  K+V V+L N   + ALVQ WID G+ ++ 
Sbjct  13   FTALFFTALCAFSANANVIITGTRVIYPAGQKNVIVKLENNDDSAALVQAWIDNGNPNAD  72

Query  64   PAADQIPFVLTPPLSRVEAKKGQIIRIIPTGSPALPQDRESLYWFNMLDIPPEDSAN---  120
            P   + PFV+TPP++RVEAK GQ +RI  TG   LP DRESL++FN+LDIPP+  A    
Sbjct  73   PKYTKTPFVITPPVARVEAKSGQSLRITFTGGEPLPDDRESLFYFNLLDIPPKPDAEFLA  132

Query  121  KDKNILTFNVRSRIKLFYRPTGLKMSSDKAFASVGYSYNNGTQAVTLNNPTPYFVTVTKV  180
            K  + +   +RSR+KLFYRP   K+S D   A     +    + V ++N TPY++    +
Sbjct  133  KHGSFMQIAIRSRLKLFYRPA--KLSLDPFDAMKKVVFKATPKGVLVDNQTPYYMNY--I  188

Query  181  DFKNQSQTASYNADVVMLAPFSQQILNKFQLKFKPDQMNYTIINDLGGNQ  230
               +Q++ A    +V M+APFSQ +     ++   D++ + ++ND G +Q
Sbjct  189  GLLHQNKPAK---NVKMVAPFSQAVFEAKGVR-SGDKLKWVLVNDYGADQ  234


>P21646 Chaperone protein MrkB [Klebsiella pneumoniae]
Length=233

 Score = 147 bits (372),  Expect = 1e-47
 Identities = 80/226 (35%), Positives = 131/226 (58%), Gaps = 9/226 (4%)

Query  6    FIISILLLSQYTNAGVSIDGTRIIFPSNAKSVSVQLRNGFATPALVQTWIDQGDMSSIPA  65
            F   I   + + N  + ++GTR I+P N K ++VQL N    PAL   W+D G+  + P 
Sbjct  7    FFCFIFSFAAHAN-NIIVNGTRFIYPGNEKEITVQLSNTADRPALATAWLDNGNADATPD  65

Query  66   ADQIPFVLTPPLSRVEAKKGQIIRIIPTGSPALPQDRESLYWFNMLDIPPEDSA--NKDK  123
                PF++TPP+SRV+AK GQ +RI    +  L +D+E+L+W N+L+IPP +++  N+ +
Sbjct  66   TITTPFIITPPISRVDAKSGQTLRIKLGSNAGLAKDKETLWWLNLLEIPPVEASQKNEGQ  125

Query  124  NILTFNVRSRIKLFYRPTGLKMSSDKAFASVGYSYNNGTQAVTLNNPTPYFVTVTKVDFK  183
            NIL   +RSR K  YRP GL  + D A   +  S N    +++++NPTP+++TV+++   
Sbjct  126  NILQLAIRSRFKFIYRPAGLG-NRDAAAEKLALSANG--SSLSVSNPTPFYITVSRI---  179

Query  184  NQSQTASYNADVVMLAPFSQQILNKFQLKFKPDQMNYTIINDLGGN  229
            +++   + N+  VM AP S Q +       K + +    IND G +
Sbjct  180  SRNGGKALNSKTVMFAPQSSQTIALSSAVSKGETLTVNNINDYGAD  225


>P33409 Chaperone protein FimB/FhaD [Bordetella pertussis (strain 
Tohama I / ATCC BAA-589 / NCTC 13251)]
Length=244

 Score = 139 bits (350),  Expect = 3e-44
 Identities = 82/223 (37%), Positives = 123/223 (55%), Gaps = 16/223 (7%)

Query  13   LSQYTNAGVSIDGTRIIFPSNAKSVSVQLRNGFATPALVQTWIDQGDMSSIPAADQIPFV  72
            L+    A + I GTR+I+ + +   +V++ N    PAL+Q WID G+  + P   Q+PF 
Sbjct  21   LAPAARASLVITGTRVIYNAGSPETTVKMSNEGQAPALMQAWIDDGNAEAKPDEVQVPFF  80

Query  73   LTPPLSRVEAKKGQIIRIIPTGSP---ALPQDRESLYWFNMLDIPPEDSANKDKNILTFN  129
            LTPPL+RV+  KGQ +RI   G P    LP DRES++W N+L++PP+ +  +   +L   
Sbjct  81   LTPPLARVDPGKGQTLRIFFNGYPDGKTLPSDRESVFWLNVLEVPPKATPEEGHGVLQLT  140

Query  130  VRSRIKLFYRPTGLKMSSDKAFASVGYSYN-NGTQAVTLNNPTPYFVTVTKVDFKNQSQT  188
            +RSR+KLFYRP GL  +   A A + +    NG   + ++NPTPY+V + K++       
Sbjct  141  IRSRLKLFYRPKGLSGNPLTAAADLTFKRKPNG--VLEVHNPTPYYVNLQKLEVGENGAH  198

Query  189  ASYNADVVMLAPFSQQILNKFQLKFK---PDQMNYTIINDLGG  228
             S      MLAP S       +L+ K      + Y  I+D GG
Sbjct  199  GSKTP--WMLAPLSSD-----ELRLKGTGAKSVQYWAIDDFGG  234


>P33342 Probable fimbrial chaperone YehC [Escherichia coli (strain 
K12)]
Length=239

 Score = 134 bits (337),  Expect = 2e-42
 Identities = 82/229 (36%), Positives = 126/229 (55%), Gaps = 15/229 (7%)

Query  3    KFSFIISILLLSQY--TNAGVSIDGTRIIFPSNAKSVSVQLRNGFATPALVQTWIDQGDM  60
            K   ++S+L+ S     +AG+ I GTRII+P+  K V VQL N     +L+Q WID GD 
Sbjct  15   KMKGLLSLLIFSMVLPAHAGIVIYGTRIIYPAENKEVMVQLMNQGNRSSLLQAWIDDGDT  74

Query  61   SSIPAADQIPFVLTPPLSRVEAKKGQ--IIRIIPTGSPALPQDRESLYWFNMLDIPPEDS  118
            S  P   Q+PF+LTPP++++ A  GQ   I+I+P     LP ++ES+++ N+LDIPP   
Sbjct  75   SLPPEKIQVPFMLTPPVAKIGANSGQQVKIKIMPN---KLPTNKESIFYLNVLDIPPNSP  131

Query  119  ANKDKNILTFNVRSRIKLFYRPTGLKMSSDKAFASVGYSYNNGTQAVTLNNPTPYFVTVT  178
              + KN L F +++RIKLFYRP G+   +   F  +    N     + + N +  +VT++
Sbjct  132  EQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKL--LVNRSGNGLVIKNDSANWVTIS  189

Query  179  KVDFKNQSQTASYNADVVMLAPFSQQILNKFQLKFKPDQMNYTIINDLG  227
             V   N       N + +M+AP   Q +N        +  + TII+D G
Sbjct  190  DVKANN----VKVNYETIMIAPLESQSVN--VKSNNANNWHLTIIDDHG  232


>P62610 Chaperone protein FocC [Escherichia coli O6:H1 (strain 
CFT073 / ATCC 700928 / UPEC)]
Length=227

 Score = 120 bits (302),  Expect = 3e-37
 Identities = 76/224 (34%), Positives = 118/224 (53%), Gaps = 17/224 (8%)

Query  5    SFIISILLLSQYTNAGVSIDGTRIIFPSNAKSVSVQLRNGFATPA-LVQTWIDQGDMSSI  63
            SF++   +   Y  AGV++  TR+I+P   K V + + N     + L+Q+WI+  +    
Sbjct  9    SFLVFFYIPQSY--AGVALGATRVIYPEGQKQVQLAVTNNDDKSSYLIQSWIENAE----  62

Query  64   PAADQIPFVLTPPLSRVEAKKGQIIRIIPTGSPALPQDRESLYWFNMLDIPPEDSANKDK  123
                   FV+TPPL  ++ KK   +RII   +  +P+DRESL+W N+  IP  D A   +
Sbjct  63   -GKKDARFVITPPLFSMQGKKENTLRIIDATNGQMPEDRESLFWVNVKAIPAMDKAKTGE  121

Query  124  NILTFNVRSRIKLFYRPTGLKMSSDKAFASVGYSYNNGTQAVTLNNPTPYFVTVTKVDFK  183
            N L F + SRIKL YRP GL +  ++A   + ++  NG   +TL NPTPY++TVT +   
Sbjct  122  NYLQFAIVSRIKLLYRPQGLVIPPEQAPGKLEFTRENG--GLTLFNPTPYYLTVTDLKAG  179

Query  184  NQSQTASYNADVVMLAPFSQQILNKFQLKFKPDQMNYTIINDLG  227
            N+S       +  M+ P  +  +N     +    + Y  IND G
Sbjct  180  NKS------LENTMVPPQGKVTVN-IPGGYTGGDITYKTINDYG  216


>P62609 Chaperone protein FocC [Escherichia coli]
Length=227

 Score = 120 bits (302),  Expect = 3e-37
 Identities = 76/224 (34%), Positives = 118/224 (53%), Gaps = 17/224 (8%)

Query  5    SFIISILLLSQYTNAGVSIDGTRIIFPSNAKSVSVQLRNGFATPA-LVQTWIDQGDMSSI  63
            SF++   +   Y  AGV++  TR+I+P   K V + + N     + L+Q+WI+  +    
Sbjct  9    SFLVFFYIPQSY--AGVALGATRVIYPEGQKQVQLAVTNNDDKSSYLIQSWIENAE----  62

Query  64   PAADQIPFVLTPPLSRVEAKKGQIIRIIPTGSPALPQDRESLYWFNMLDIPPEDSANKDK  123
                   FV+TPPL  ++ KK   +RII   +  +P+DRESL+W N+  IP  D A   +
Sbjct  63   -GKKDARFVITPPLFSMQGKKENTLRIIDATNGQMPEDRESLFWVNVKAIPAMDKAKTGE  121

Query  124  NILTFNVRSRIKLFYRPTGLKMSSDKAFASVGYSYNNGTQAVTLNNPTPYFVTVTKVDFK  183
            N L F + SRIKL YRP GL +  ++A   + ++  NG   +TL NPTPY++TVT +   
Sbjct  122  NYLQFAIVSRIKLLYRPQGLVIPPEQAPGKLEFTRENG--GLTLFNPTPYYLTVTDLKAG  179

Query  184  NQSQTASYNADVVMLAPFSQQILNKFQLKFKPDQMNYTIINDLG  227
            N+S       +  M+ P  +  +N     +    + Y  IND G
Sbjct  180  NKS------LENTMVPPQGKVTVN-IPGGYTGGDITYKTINDYG  216


>Q8X5K6 Probable fimbrial chaperone LpfB [Escherichia coli O157:H7]
Length=232

 Score = 113 bits (283),  Expect = 2e-34
 Identities = 68/176 (39%), Positives = 105/176 (60%), Gaps = 10/176 (6%)

Query  3    KFSFIISILLLSQYTNAG-VSIDGTRIIFPSNAKSVSVQLRNGFATPA-LVQTWIDQGDM  60
            KF  +   L LSQ   AG V +  TR+I+  + K  S+ ++N   T   L+Q+W+D    
Sbjct  8    KFVALALSLFLSQSVLAGGVGLSSTRVIYDGSKKEASLTVQNKSKTEEFLIQSWVDDAAG  67

Query  61   SSIPAADQIPFVLTPPLSRVEAKKGQIIRIIPTGSPALPQDRESLYWFNMLDIPPEDSAN  120
            S      + PF++TPPL +++ +K  I+RI+   +P LPQDRES+YW N+  IP +   +
Sbjct  68   SK-----KTPFIITPPLFKLDPEKNNILRIVNI-TPGLPQDRESVYWVNVKAIPSKSDDS  121

Query  121  KDKNILTFNVRSRIKLFYRPTGLKMSSDKAFASVGYSYNNGTQAVTLNNPTPYFVT  176
            ++KN+L   VR+RIKLFYRP GLK     A   + ++  NG Q + ++NPT + +T
Sbjct  122  ENKNVLQIAVRTRIKLFYRPAGLKGDVKTAPNELRFT-RNGNQ-LRVDNPTVFNIT  175


>P59590 Chaperone protein FimC [Escherichia coli O6:H1 (strain 
CFT073 / ATCC 700928 / UPEC)]
Length=241

 Score = 112 bits (281),  Expect = 5e-34
 Identities = 59/172 (34%), Positives = 98/172 (57%), Gaps = 8/172 (5%)

Query  11   LLLSQYTNAGVSIDGTRIIFPSNAKSVSVQLRNGFATPA-LVQTWIDQGDMSSIPAADQI  69
            ++++    AGV++  TR+I+P+  K V + + N       L+Q+W++  D          
Sbjct  28   MVVAGRAEAGVALGATRVIYPAGQKQVQLAVTNNDENSTYLIQSWVENAD-----GVKDG  82

Query  70   PFVLTPPLSRVEAKKGQIIRIIPTGSPALPQDRESLYWFNMLDIPPEDSANKDKNILTFN  129
             F++TPPL  ++ KK   +RI+   +  LPQDRESL+W N+  IP  D +   +N L   
Sbjct  83   RFIVTPPLFAMKGKKENTLRILDATNNQLPQDRESLFWMNVKAIPSMDKSKLTENTLQLA  142

Query  130  VRSRIKLFYRPTGLKMSSDKAFASVGYSYNNGTQAVTLNNPTPYFVTVTKVD  181
            + SRIKL+YRP  L +  D+A   +   +     ++TL NPTPY++TVT+++
Sbjct  143  IISRIKLYYRPAKLALPPDQAAEKL--RFRRSANSLTLINPTPYYLTVTELN  192


>P31697 Chaperone protein FimC [Escherichia coli (strain K12)]
Length=241

 Score = 110 bits (276),  Expect = 3e-33
 Identities = 58/172 (34%), Positives = 97/172 (56%), Gaps = 8/172 (5%)

Query  11   LLLSQYTNAGVSIDGTRIIFPSNAKSVSVQLRNGFATPA-LVQTWIDQGDMSSIPAADQI  69
            ++++    AGV++  TR+I+P+  K   + + N       L+Q+W++  D          
Sbjct  28   MMVAGRAEAGVALGATRVIYPAGQKQEQLAVTNNDENSTYLIQSWVENAD-----GVKDG  82

Query  70   PFVLTPPLSRVEAKKGQIIRIIPTGSPALPQDRESLYWFNMLDIPPEDSANKDKNILTFN  129
             F++TPPL  ++ KK   +RI+   +  LPQDRESL+W N+  IP  D +   +N L   
Sbjct  83   RFIVTPPLFAMKGKKENTLRILDATNNQLPQDRESLFWMNVKAIPSMDKSKLTENTLQLA  142

Query  130  VRSRIKLFYRPTGLKMSSDKAFASVGYSYNNGTQAVTLNNPTPYFVTVTKVD  181
            + SRIKL+YRP  L +  D+A   +   +     ++TL NPTPY++TVT+++
Sbjct  143  IISRIKLYYRPAKLALPPDQAAEKL--RFRRSANSLTLINPTPYYLTVTELN  192


>P43661 Chaperone protein LpfB [Salmonella typhimurium (strain 
LT2 / SGSC1412 / ATCC 700720)]
Length=232

 Score = 107 bits (268),  Expect = 3e-32
 Identities = 60/172 (35%), Positives = 102/172 (59%), Gaps = 9/172 (5%)

Query  10   ILLLSQYTNAG-VSIDGTRIIFPSNAKSVSVQLRNGFATPA-LVQTWIDQGDMSSIPAAD  67
            + L++Q + AG V++  TR+I+  + K  S+ + N   T   L+Q+WID  + +      
Sbjct  14   LALIAQNSFAGGVALSSTRVIYDGSRKEASLTVNNKSTTDEFLIQSWIDDANGNK-----  68

Query  68   QIPFVLTPPLSRVEAKKGQIIRIIPTGSPALPQDRESLYWFNMLDIPPEDSANKDKNILT  127
            + PF++TPPL ++   K  ++RI+ T +  LPQDRES+YW N+  IP +    + KN+L 
Sbjct  69   KTPFIITPPLFKLSPTKNNVLRIVNTTN-TLPQDRESVYWINVKAIPAKSEDAEAKNVLQ  127

Query  128  FNVRSRIKLFYRPTGLKMSSDKAFASVGYSYNNGTQAVTLNNPTPYFVTVTK  179
              VR+R+KLFYRP GLK +S   +  + ++ + G   + + NP+ + +T  K
Sbjct  128  IAVRTRLKLFYRPAGLKGNSMDGWNKLQFT-SAGANQIKVENPSAFNLTFNK  178


>P53520 Chaperone protein PmfD [Proteus mirabilis (strain HI4320)]
Length=254

 Score = 107 bits (266),  Expect = 1e-31
 Identities = 75/231 (32%), Positives = 111/231 (48%), Gaps = 11/231 (5%)

Query  3    KFSFIISILLLS--QYTNAGVSIDGTRIIFPSNAKSVSVQLRNGFAT-PALVQTWIDQGD  59
            K  F  S+L LS    T AGVS+D TRI+   N  S SV L+N     P L Q+W++  +
Sbjct  8    KTLFCGSLLALSLVNTTQAGVSLDRTRIVLTGNENSASVNLKNTSPDIPFLAQSWVENEN  67

Query  60   MSSIPAADQIPFVLTPPLSRVEAKKGQIIRIIPTGSPAL-PQDRESLYWFNMLDIPPEDS  118
               I +    P V  PPL R++  +  ++RI  T    L PQDRESL++ N+ +IPP   
Sbjct  68   GQKISS----PLVALPPLQRLDGAQKGVVRITKTAEVGLLPQDRESLFYLNVREIPP---  120

Query  119  ANKDKNILTFNVRSRIKLFYRPTGLKMSSDKAFASVGYSYNNGTQAVTLNNPTPYFVTVT  178
            A K  N+L   ++SRIKLFYRP+ +              +        +NNPTPY++T+ 
Sbjct  121  APKQANVLQMAMQSRIKLFYRPSAIVPEKPGMVWQDQLVFKKQGNKFIVNNPTPYYITII  180

Query  179  KVDFKNQSQTASYNADVVMLAPFSQQILNKFQLKFKPDQMNYTIINDLGGN  229
             +  K   + +        L    +  L+        +Q     +ND GG+
Sbjct  181  SLSNKLNGEDSDKLTTFPGLMVAPKASLDIPVKTSNVNQFYMMYVNDYGGH  231


>P15319 Chaperone protein PapD [Escherichia coli]
Length=239

 Score = 106 bits (265),  Expect = 1e-31
 Identities = 69/213 (32%), Positives = 114/213 (54%), Gaps = 14/213 (7%)

Query  18   NAGVSIDGTRIIFPSNAKSVSVQLRN-GFATPALVQTWIDQGDMSSIPAADQIPFVLTPP  76
            +A VS+D TR +F  + KS+++ + N     P L Q WI+  +   I      P + TPP
Sbjct  20   DAAVSLDRTRAVFDGSEKSMTLDISNDNKQLPYLAQAWIENENQEKIITG---PVIATPP  76

Query  77   LSRVEAKKGQIIRIIPTGSPA-LPQDRESLYWFNMLDIPPEDSANKDKNILTFNVRSRIK  135
            + R+E     ++R+  T   + LPQDRESL++FN+ +IPP    ++  N+L   ++++IK
Sbjct  77   VQRLEPGAKSMVRLSTTPDISKLPQDRESLFYFNLREIPPR---SEKANVLQIALQTKIK  133

Query  136  LFYRPTGLKMSSDKAFASVGYSYNNGTQAVTLNNPTPYFVTVTKVDFKNQSQTASYNADV  195
            LFYRP  +K   ++ +       N  +    + NPTPY+VTV  +   ++ Q      + 
Sbjct  134  LFYRPAAIKTRPNEVWQD-QLILNKVSGGYRIENPTPYYVTVIGLG-GSEKQAEEGEFET  191

Query  196  VMLAPFSQQILNKFQLKFKPDQMNYTIINDLGG  228
            VML+P S+Q +      +    ++Y  IND GG
Sbjct  192  VMLSPRSEQTVK--SANYNTPYLSY--INDYGG  220



Lambda      K        H        a         alpha
   0.321    0.135    0.394    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 538785


  Database: 982e2967c5ea2168f8ce44424032d804.SwissProt.fasta
    Posted date:  May 20, 2024  7:24 AM
  Number of letters in database: 3,337
  Number of sequences in database:  14



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40