BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 08c9bc0fcff8691cf9f8c880adeed078.SwissProt.fasta
6 sequences; 6,450 total letters
Query= ACIAD0390
Length=350
Score E
Sequences producing significant alignments: (Bits) Value
P46590 Agglutinin-like protein 1 [Candida albicans] 43.9 6e-08
Q5A8T4 Agglutinin-like protein 1 [Candida albicans (strain SC5314... 43.9 6e-08
P30762 Large ribosomal subunit protein uL3 [Mycobacterium leprae ... 38.9 1e-06
P12021 Apomucin [Sus scrofa] 39.3 2e-06
Q54SK5 Hybrid signal transduction histidine kinase M [Dictyosteli... 37.7 6e-06
P13429 S-fimbrial protein subunit SfaG [Escherichia coli O6:K15:H... 34.7 2e-05
>P46590 Agglutinin-like protein 1 [Candida albicans]
Length=1260
Score = 43.9 bits (102), Expect = 6e-08
Identities = 65/299 (22%), Positives = 108/299 (36%), Gaps = 33/299 (11%)
Query 30 VNFTANLTNAHS--DNAYLQLVAQTIAASSPQPIDSCIGSGPSTFTMSGVTDLTTSSTIS 87
V FT+N N D+ + + SS + + + S TDLT+ T +
Sbjct 965 VTFTSNGDNQSGTHDSQSTSTEIEIVTTSSTKVLPPVVSSN---------TDLTSEPTNT 1015
Query 88 KDGYTYYQIPSAKITPTAAAANLKVYLAFSVKDNQD--SATEYLVDSASTTYTIYTGASD 145
++ T S IT + DN D S+T + A++T + +
Sbjct 1016 REQPTTLSTTSNSITEDITTSQ-------PTGDNGDNTSSTNPVPTVATSTLASASEEDN 1068
Query 146 TRGIRLQNVRLLVTGLGNTAGTYTISSLKLGNFS-----AKGSASTTATTAIVLNSATFQ 200
G L +G +G T + ++ S + +S T T ++
Sbjct 1069 KSGSHESASTSLKPSMGENSGLTTSTEIEATTTSPTEAPSPAVSSGTDVTTEPTDTREQP 1128
Query 201 ITKSTCVINNGAAINVTLPTVPN-----STFTTIGQTVG---DTTFNVSVTGCGSSDANK 252
T ST N ++ T T N ST T T G T+ N + GS
Sbjct 1129 TTLSTTSKTNSESVATTQATNENGGKSPSTDLTSSLTTGTSASTSANSELVTSGSVTGGA 1188
Query 253 TLVALLTDNNNASASNTNGLLKNTYSTNVSVQITDSAGTALPIAPKSIDSSSSFFSFGT 311
A +++ S +N+N ++ NT T +S Q+T S+ + + D S S T
Sbjct 1189 VASASNDQSHSTSVTNSNSIVSNTPQTTLSQQVTSSSPSTNTFIASTYDGSGSIIQHST 1247
Score = 25.4 bits (54), Expect = 0.037
Identities = 73/372 (20%), Positives = 132/372 (35%), Gaps = 56/372 (15%)
Query 17 SQSHAVCTTRTNPVNFTANLTNAHSDNAYLQLV---AQTIAASSPQPIDSCIGSGPSTFT 73
SQS+A TT T P T + N + +Q+ A ++ +GP + T
Sbjct 589 SQSYATTTTVTAPPGGTDTVIIREPPNHTVTTTEYWSQSFATTTTV-------TGPPSGT 641
Query 74 MSGVTDLTTSSTISKDGYTYYQIPSAKITPTAAAANLKVYLAFSVKDNQDSATEYLVDSA 133
+ + + T++ Y + Q + T TA L ++ + TEY S
Sbjct 642 DTVIIREPPNPTVTTTEY-WSQSYATTTTITAPPGETDTVLIREPPNHTVTTTEYWSQSY 700
Query 134 STTYTIYT--GASDTRGIR-------------LQNVRLLVTGLGNTAGTYTI-------S 171
+TT T+ G +DT IR Q+ T GT T+
Sbjct 701 ATTTTVTAPPGETDTVLIREPPNHTVTTTEYWSQSYATTTTVTAPPGGTDTVIIREPPNP 760
Query 172 SLKLGNFSAKGSASTTATTAIVLNSATFQITKSTCVINNGAAINVTLPTVPN-------- 223
++ + ++ A+TT TA + T I +S + N +P+
Sbjct 761 TVTTTEYWSQSFATTTTVTAPPGGTDTVIIYESMSSSKISTSSNDITSIIPSFSRPHYVN 820
Query 224 ---STFTTIGQTVGDTTFNVSVTGCGSS------DANKTLVALLTDNNNAS-ASNTNGLL 273
S +T + +T ++S G S ++ T ++ +D S S+++G++
Sbjct 821 STTSDLSTFESSSMNTPTSISSDGMLLSSTTLVTESETTTESICSDGKECSRLSSSSGIV 880
Query 274 KNTYSTNVSVQITDSAGTALPIAPKSIDSSSSFFSFGTIGSGGAVSKAFKARYYSNVAAV 333
N S S+ + +P A DS SS S ++V +
Sbjct 881 TNPDSNESSI-----VTSTVPTASTMSDSLSSTDGISATSSDNVSKSGVSVTTETSVTTI 935
Query 334 PATLVQAQATIT 345
T +++T
Sbjct 936 QTTPNPLSSSVT 947
Score = 21.6 bits (44), Expect = 0.59
Identities = 31/112 (28%), Positives = 46/112 (41%), Gaps = 9/112 (8%)
Query 124 SATEYLVDSASTTYTIYT--GASDTRGIRLQNVRLLVT---GLGNTAGTYTISSLKLGNF 178
S TEY S +TT T+ G +DT IR + T + A T T+++ G
Sbjct 439 STTEYWSQSFATTTTVTAPPGGTDTVIIREPPNHTVTTTEYWSQSFATTTTVTAPPGGTD 498
Query 179 SA--KGSASTTATTAIVLNSATFQITKSTCVINNGAAINVTLPTVPNSTFTT 228
S + + T TT + + T +T G +V + PN T TT
Sbjct 499 SVIIREPPNPTVTTTEYWSQSF--ATTTTVTAPPGGTDSVIIREPPNPTVTT 548
Score = 20.0 bits (40), Expect = 1.8
Identities = 54/272 (20%), Positives = 96/272 (35%), Gaps = 28/272 (10%)
Query 24 TTRTNPVNFTANLTNAHSDNAYLQLVAQTIAASSPQPIDSCIGSGPSTFTMSGVTDLT-- 81
TTRTNP + D +Q+ + S+ + + + G TD
Sbjct 415 TTRTNPTD--------SIDTVVVQVPSPNPTVSTTEYWSQSFATTTTVTAPPGGTDTVII 466
Query 82 ---TSSTISKDGYTYYQIPSAKITPTAAAANLKVYLAFSVKDNQDSATEYLVDSASTTYT 138
+ T++ Y + Q + T TA + + + TEY S +TT T
Sbjct 467 REPPNHTVTTTEY-WSQSFATTTTVTAPPGGTDSVIIREPPNPTVTTTEYWSQSFATTTT 525
Query 139 IYTGASDTRGIRLQ---NVRLLVTGLGNT--AGTYTISSLKLGNFSA--KGSASTTATTA 191
+ T + ++ N + T + A T T+++ G S + + T TT
Sbjct 526 VTAPPGGTDSVIIREPPNPTVTTTEYWSQSYATTTTVTAPPGGTDSVIIREPPNHTVTTT 585
Query 192 IVLNSATFQITKSTCVINNGAAINVTLPTVPNSTFTTIGQTVGDTTFNVSVTGCGSSDAN 251
+ + T +T G V + PN T TT +VTG S
Sbjct 586 EYWSQS--YATTTTVTAPPGGTDTVIIREPPNHTVTTTEYWSQSFATTTTVTGPPSG--- 640
Query 252 KTLVALLTDNNNASASNTNGLLKNTYSTNVSV 283
T ++ + N + + T +Y+T ++
Sbjct 641 -TDTVIIREPPNPTVTTTE-YWSQSYATTTTI 670
>Q5A8T4 Agglutinin-like protein 1 [Candida albicans (strain SC5314
/ ATCC MYA-2876)]
Length=1260
Score = 43.9 bits (102), Expect = 6e-08
Identities = 65/299 (22%), Positives = 108/299 (36%), Gaps = 33/299 (11%)
Query 30 VNFTANLTNAHS--DNAYLQLVAQTIAASSPQPIDSCIGSGPSTFTMSGVTDLTTSSTIS 87
V FT+N N D+ + + SS + + + S TDLT+ T +
Sbjct 965 VTFTSNGDNQSGTHDSQSTSTEIEIVTTSSTKVLPPVVSSN---------TDLTSEPTNT 1015
Query 88 KDGYTYYQIPSAKITPTAAAANLKVYLAFSVKDNQD--SATEYLVDSASTTYTIYTGASD 145
++ T S IT + DN D S+T + A++T + +
Sbjct 1016 REQPTTLSTTSNSITEDITTSQ-------PTGDNGDNTSSTNPVPTVATSTLASASEEDN 1068
Query 146 TRGIRLQNVRLLVTGLGNTAGTYTISSLKLGNFS-----AKGSASTTATTAIVLNSATFQ 200
G L +G +G T + ++ S + +S T T ++
Sbjct 1069 KSGSHESASTSLKPSMGENSGLTTSTEIEATTTSPTEAPSPAVSSGTDVTTEPTDTREQP 1128
Query 201 ITKSTCVINNGAAINVTLPTVPN-----STFTTIGQTVG---DTTFNVSVTGCGSSDANK 252
T ST N ++ T T N ST T T G T+ N + GS
Sbjct 1129 TTLSTTSKTNSESVATTQATNENGGKSPSTDLTSSLTTGTSASTSANSELVTSGSVTGGA 1188
Query 253 TLVALLTDNNNASASNTNGLLKNTYSTNVSVQITDSAGTALPIAPKSIDSSSSFFSFGT 311
A +++ S +N+N ++ NT T +S Q+T S+ + + D S S T
Sbjct 1189 VASASNDQSHSTSVTNSNSIVSNTPQTTLSQQVTSSSPSTNTFIASTYDGSGSIIQHST 1247
Score = 24.6 bits (52), Expect = 0.065
Identities = 75/376 (20%), Positives = 129/376 (34%), Gaps = 64/376 (17%)
Query 17 SQSHAVCTTRTNPVNFTANLTNAHSDNA-------YLQLVAQTIAASSPQPIDSCIGSGP 69
SQS+A TT T P T + N + Q A T ++P G
Sbjct 589 SQSYATTTTITAPPGETDTVIIREPPNHTVTTTEYWSQSYATTTTVTAPP-------GGT 641
Query 70 STFTMSGVTDLTTSSTISKDGYTYYQIPSAKITPTAAAANLKVYLAFSVKDNQDSATEYL 129
T + + T ++T + Q + T TA L ++ + TEY
Sbjct 642 DTVLIREPPNHTVTTT-----EYWSQSYATTTTVTAPPGGTDTVLIREPPNHTVTTTEYW 696
Query 130 VDSASTTYTIYT--GASDTRGIR-------------LQNVRLLVTGLGNTAGTYTISSLK 174
S +TT T+ G +DT IR Q+ T GT T+ +
Sbjct 697 SQSYATTTTVTAPPGGTDTVIIREPPNHTVTTTEYWSQSYATTTTVTAPPGGTDTVIIRE 756
Query 175 LGNFS-------AKGSASTTATTAIVLNSATFQITKSTCVINNGAAINVTLPTVPN---- 223
N++ ++ A+TT TA + T I +S + N +P+
Sbjct 757 PPNYTVTTTEYWSQSFATTTTVTAPPGGTDTVIIYESMSSSKISTSSNDITSIIPSFSRP 816
Query 224 -------STFTTIGQTVGDTTFNVSVTGCGSS------DANKTLVALLTDNNNAS-ASNT 269
S +T + +T ++S G S ++ T ++ +D S S++
Sbjct 817 HYVNSTTSDLSTFESSSMNTPTSISSDGMLLSSTTLVTESETTTESICSDGKECSRLSSS 876
Query 270 NGLLKNTYSTNVSVQITDSAGTALPIAPKSIDSSSSFFSFGTIGSGGAVSKAFKARYYSN 329
+G++ N S S+ + +P A DS SS S ++
Sbjct 877 SGIVTNPDSNESSI-----VTSTVPTASTMSDSLSSTDGISATSSDNVSKSGVSVTTETS 931
Query 330 VAAVPATLVQAQATIT 345
V + T +++T
Sbjct 932 VTTIQTTPNPLSSSVT 947
Score = 23.1 bits (48), Expect = 0.20
Identities = 49/227 (22%), Positives = 77/227 (34%), Gaps = 40/227 (18%)
Query 17 SQSHAVCTTRTNPVNFT--------ANLTNAHSDNAYLQLVAQTIAASSPQPIDSCIGSG 68
SQS+A TT T P T N T ++ T + P D+ I
Sbjct 445 SQSYATTTTVTAPPGGTDTVIIREPPNHTVTTTEYWSQSFATTTTVTAPPGETDTVIIRE 504
Query 69 PSTFTMSGVTDLTTSSTISKDGYTYYQIPSAKITPTAAAANLKVYLAFSVKDNQDSATEY 128
P T+ TT+ S+ T T TA L ++ + TEY
Sbjct 505 PPNHTV------TTTEYWSQSYAT-------TTTVTAPPGGTDTVLIREPPNHTVTTTEY 551
Query 129 LVDSASTTYTIYT--GASDTRGIRLQNVRLLVTGLGNTAGTYTISSLKLGNFSAKGSAST 186
S +TT T+ G +DT IR YT+++ + + S + +
Sbjct 552 WSQSYATTTTVTAPPGGTDTVIIR-------------EPPNYTVTTTEYWSQSYATTTTI 598
Query 187 TA----TTAIVLNSATFQITKSTCVINNGAAINVTLPTVPNSTFTTI 229
TA T +++ +T + A T+ P T T +
Sbjct 599 TAPPGETDTVIIREPPNHTVTTTEYWSQSYATTTTVTAPPGGTDTVL 645
Score = 23.1 bits (48), Expect = 0.20
Identities = 38/148 (26%), Positives = 52/148 (35%), Gaps = 31/148 (21%)
Query 17 SQSHAVCTTRT------------NPVNFTANLTNAHSDNAYLQLVAQTIAASSPQPIDSC 64
SQS+A TT T P N+T T S + T + P D+
Sbjct 553 SQSYATTTTVTAPPGGTDTVIIREPPNYTVTTTEYWSQS----YATTTTITAPPGETDTV 608
Query 65 IGSGPSTFTMSGVTDLTTSSTISKDGYTYYQIPSAKITPTAAAANLKVYLAFSVKDNQDS 124
I P T+ TT+ S+ T T TA L ++ +
Sbjct 609 IIREPPNHTV------TTTEYWSQSYAT-------TTTVTAPPGGTDTVLIREPPNHTVT 655
Query 125 ATEYLVDSASTTYTIYT--GASDTRGIR 150
TEY S +TT T+ G +DT IR
Sbjct 656 TTEYWSQSYATTTTVTAPPGGTDTVLIR 683
Score = 21.2 bits (43), Expect = 0.77
Identities = 51/239 (21%), Positives = 83/239 (35%), Gaps = 55/239 (23%)
Query 64 CIGSGPSTFTMS-GVTDLTTS-----STISKDGYTY--------YQIPSAKITPTAAAAN 109
C +G +T T + G D++ ST+ GY Y ++ + + P
Sbjct 150 CFTAGTNTVTFNDGDKDISIDVEFEKSTVDPSGYLYASRVMPSLNKVTTLFVAPQCENGY 209
Query 110 LKVYLAFSVKDNQDSATE----------------YLVDSASTTYTIYTGASDTRGIRLQN 153
+ FS N D A + Y V S S +YT T S+ I+ QN
Sbjct 210 TSGTMGFS-SSNGDVAIDCSNIHIGITKGLNDWNYPVSSESFSYT-KTCTSNGIQIKYQN 267
Query 154 V----RLLVTGLGNTAGTYTISSLKLGNFSAKGSASTT---------------ATTAIVL 194
V R + + + +++ GS S + + IV+
Sbjct 268 VPAGYRPFIDAYISATDVNQYTLAYTNDYTCAGSRSQSKPFTLRWTGYKNSDAGSNGIVI 327
Query 195 NSATFQITKSTCVINNGAAINVTLPTVPNSTFTTIGQTVGDTTFNVSVTGCGSSDANKT 253
+ T +T ST + N P+V + I Q + TT S G +S + KT
Sbjct 328 VATTRTVTDSTTAVTT-LPFN---PSVDKTKTIEILQPIPTTTITTSYVGVTTSYSTKT 382
Score = 21.2 bits (43), Expect = 0.77
Identities = 31/137 (23%), Positives = 53/137 (39%), Gaps = 22/137 (16%)
Query 24 TTRTNPVNFTANL-------TNAHSDNAYLQLVAQTIAASSP-QPIDSCIGSGPSTFTMS 75
+T+T P+ TA + T + + + T ++P ID+ + PS
Sbjct 379 STKTAPIGETATVIVDVPYHTTTTVTSEWTGTITTTTTRTNPTDSIDTVVVQVPSP---- 434
Query 76 GVTDLTTSSTISKDGYTYYQIPSAKITPTAAAANLKVYLAFSVKDNQDSATEYLVDSAST 135
+ T+S Y + Q + T TA + ++ + TEY S +T
Sbjct 435 -------NPTVSTTEY-WSQSYATTTTVTAPPGGTDTVIIREPPNHTVTTTEYWSQSFAT 486
Query 136 TYTIYT--GASDTRGIR 150
T T+ G +DT IR
Sbjct 487 TTTVTAPPGETDTVIIR 503
>P30762 Large ribosomal subunit protein uL3 [Mycobacterium leprae
(strain TN)]
Length=217
Score = 38.9 bits (89), Expect = 1e-06
Identities = 33/120 (28%), Positives = 48/120 (40%), Gaps = 18/120 (15%)
Query 69 PSTFTMSGVTDLTTSSTISKDGYTYYQIPSAKITP-----------TAAAANLKVYLAFS 117
P T +G +T T+ +DGY+ Q+ +I+P +A N + YLA
Sbjct 25 PVTVVKAGPNVVTRIRTLERDGYSAVQLAYGEISPRKVNKPVTGQYNSAGVNPRRYLAEL 84
Query 118 VKDNQDSATEYLVDS-------ASTTYTIYTGASDTRGIRLQNVRLLVTGLGNTAGTYTI 170
D+ D+A EY V A TY TG S +G R G G + G +
Sbjct 85 RLDHPDAAAEYEVGQELTAEIFADATYVDVTGTSKGKGFSGTMKRHGFRGQGASHGAQAV 144
Score = 17.7 bits (34), Expect = 7.8
Identities = 10/28 (36%), Positives = 12/28 (43%), Gaps = 0/28 (0%)
Query 28 NPVNFTANLTNAHSDNAYLQLVAQTIAA 55
NP + A L H D A V Q + A
Sbjct 76 NPRRYLAELRLDHPDAAAEYEVGQELTA 103
>P12021 Apomucin [Sus scrofa]
Length=1150
Score = 39.3 bits (90), Expect = 2e-06
Identities = 51/183 (28%), Positives = 77/183 (42%), Gaps = 17/183 (9%)
Query 66 GSG-PSTFTMSGVTDLTTSSTISKDGYTYYQIPSA--KITPTAAAANLKVYLAFSVKDNQ 122
GSG P T + G T + +TI+ T S +I P A +V +Q
Sbjct 522 GSGSPGTGSRPGTTGELSGTTIASGNATTEATTSTETRIGPQTGAQT-------TVPGSQ 574
Query 123 DSATEYLVDSASTTYTIYTGASDTRGIRLQNVRLLVTGLGNTAGTYTISSLKLGNFSAKG 182
S +E A + I +G+S T G VTG + GT + + LG A G
Sbjct 575 VSGSETGTSEAVSNPAIASGSSST-GTTSGASDSQVTG--SRTGT---TGVVLGTTVAPG 628
Query 183 SASTTATTAIVLNSATFQITKSTCVINNGAAI-NVTLPTVPNSTFTTIGQTVGDTTFNVS 241
S+ST ATT +++N T + T + +G + T +VP+ T G + +
Sbjct 629 SSSTGATTGVLINEGTRSTSLGTTRVASGTTYESGTSNSVPSGGSGTPGSGINTGGSSTQ 688
Query 242 VTG 244
VTG
Sbjct 689 VTG 691
Score = 27.3 bits (59), Expect = 0.009
Identities = 45/176 (26%), Positives = 69/176 (39%), Gaps = 22/176 (13%)
Query 138 TIYTGASDTRGIRLQNVRLLVTGLGNTAGTYTISSLKLGNFSAKGSASTTATTAIVLNSA 197
T+ G+S+T + R T G+ G + S G A GS++T ATT++
Sbjct 704 TLLPGSSNTGATTSPSER---TSPGSKTGITRVVS---GTTVASGSSNTGATTSLGRGET 757
Query 198 T--------FQITKSTCVINNGAAINVTLPTVPNSTFTTIGQTVGDTTFNVSVTGCGSSD 249
T +T T V T PT + T G VG T+ + TG +
Sbjct 758 TQGGIKIVITGVTVGTTVAPGSFNTKATTPTEVRAA-TGAGTAVGATSRS---TGISTGP 813
Query 250 ANKTLVALLTDNNNASASNTNGLLKNTYSTNVSVQITDSAGTALPIAPKSIDSSSS 305
N T T+ + + S+ G+ T +T T AG + +P S +SS
Sbjct 814 ENST--PGTTETGSGTTSSPGGV--KTEATTFKGVGTTEAGISSGNSPGSGGVTSS 865
Score = 25.0 bits (53), Expect = 0.049
Identities = 47/210 (22%), Positives = 76/210 (36%), Gaps = 33/210 (16%)
Query 124 SATEYLVDSASTTYTIYTGASDTRGIRLQNVRLLVTGLGNTAGTYTISSLKLGNFSAKGS 183
S T Y + T+ ++ +G S T G + G GT + G+ GS
Sbjct 656 SGTTY---ESGTSNSVPSGGSGTPGSGINTGGSSTQVTGIQTGTTAVG---FGSTLLPGS 709
Query 184 ASTTATTAIVLNSATFQITKSTCVI----------NNGAAINVTLPTVPNS------TFT 227
++T ATT+ ++ T T V+ N GA ++ T
Sbjct 710 SNTGATTSPSERTSPGSKTGITRVVSGTTVASGSSNTGATTSLGRGETTQGGIKIVITGV 769
Query 228 TIGQTVGDTTFNVSVTGCGSSDANKTLVALLTDNNNA--SASNTNGLLKNTYSTNVSVQI 285
T+G TV +FN T T V T A + S + G+ ++
Sbjct 770 TVGTTVAPGSFNTKAT-------TPTEVRAATGAGTAVGATSRSTGISTGPENSTPGTTE 822
Query 286 TDSAGTALPIAPKSIDSSSSFFSFGTIGSG 315
T S T+ P K+ +++F GT +G
Sbjct 823 TGSGTTSSPGGVKT--EATTFKGVGTTEAG 850
Score = 24.6 bits (52), Expect = 0.065
Identities = 43/205 (21%), Positives = 75/205 (37%), Gaps = 16/205 (8%)
Query 63 SCIGSGPSTFTMSGVTDLTTS-----STISKDGYTYYQIPSAKITPTAAAANLKVYLAFS 117
+ +G G + S T TTS S SK G T ++ S T + ++N +
Sbjct 697 TAVGFGSTLLPGSSNTGATTSPSERTSPGSKTGIT--RVVSGT-TVASGSSNTGATTSLG 753
Query 118 VKDNQDSATEYLVDSASTTYTIYTGASDTRGIRLQNVRLLVTGLGNTAGTYTISSLKLGN 177
+ + ++ + T+ G+ +T+ VR TG G G T S +
Sbjct 754 RGETTQGGIKIVITGVTVGTTVAPGSFNTKATTPTEVRA-ATGAGTAVGA-TSRSTGIST 811
Query 178 FSAKGSASTTATTAIVLNSATFQITKSTCVINNGAA-INVTLPTVPNSTFTTIGQT---- 232
+ TT T + +S T++T G ++ P S T Q
Sbjct 812 GPENSTPGTTETGSGTTSSPGGVKTEATTFKGVGTTEAGISSGNSPGSGGVTSSQEGTSR 871
Query 233 -VGDTTFNVSVTGCGSSDANKTLVA 256
+TT ++ GS+ +K + A
Sbjct 872 EASETTTAPRISATGSTSVSKEITA 896
Score = 23.5 bits (49), Expect = 0.15
Identities = 58/262 (22%), Positives = 93/262 (35%), Gaps = 61/262 (23%)
Query 66 GSGPSTFTMS-GVTDL---------TTSSTISKDGYTYYQIPSAKITPTAAAANLKVYLA 115
G+GP T S GVT+ TT + G T S+ +P A A++
Sbjct 68 GAGPGTTASSVGVTETARPSVAGSGTTGTVSGASGST----GSSSGSPGATGASI----- 118
Query 116 FSVKDNQDSATEYLVDSASTTYTIYTGASDTRGIRLQNVRLLVTGLGNTAGTYTISSLKL 175
Q + V +S + +GAS G G G TA + ++
Sbjct 119 -----GQPETSRISVAGSSGAPAVSSGASQAAGTS-------GAGPGTTASSVGVTE--- 163
Query 176 GNFSAKGSASTTATTAIVLNSATFQITKSTCVINNGAAINVTLPTVPNSTFTTIGQTVGD 235
+A+ S + + TT V ++ + S P +T +IGQ
Sbjct 164 ---TARPSVAGSGTTGTVSGASGSTGSSSGS---------------PGATGASIGQ---P 202
Query 236 TTFNVSVTGCGSSDANKTLVALLTDNNNASASNTNGLLKNTYSTNVSVQITDSAGTALPI 295
T +SV G + A + + + A T + T + SV + + GT
Sbjct 203 ETSRISVAGSSGAPAVSSGASQAAGTSGAGPGTTASSVGVTETARPSVAGSGTTGTV--- 259
Query 296 APKSIDSSSSFFSFGTIGSGGA 317
S S S+ S G+ G+ GA
Sbjct 260 ---SGASGSTGSSSGSPGATGA 278
Score = 23.5 bits (49), Expect = 0.15
Identities = 35/151 (23%), Positives = 58/151 (38%), Gaps = 18/151 (12%)
Query 165 AGTYTISSLKLGNFSAKGSASTTATTAIVLNSA--------TFQITKSTCVINNGAAINV 216
+G+ T +S + GS+ T ATT I + + T T + + A
Sbjct 493 SGSETGTSGEFSTTVISGSSHTEATTFIGGSGSPGTGSRPGTTGELSGTTIASGNATTEA 552
Query 217 TLPTVPNSTFTTIGQTVGDTTFNVSVTGCGSSDANKTLVALLTDNNNASASNTNGLLKNT 276
T ST T IG G T +V G S + +++ AS S++ G
Sbjct 553 T-----TSTETRIGPQTGAQT---TVPGSQVSGSETGTSEAVSNPAIASGSSSTGTTSGA 604
Query 277 YSTNVSVQITDSAGTAL--PIAPKSIDSSSS 305
+ V+ T + G L +AP S + ++
Sbjct 605 SDSQVTGSRTGTTGVVLGTTVAPGSSSTGAT 635
Score = 23.1 bits (48), Expect = 0.19
Identities = 62/259 (24%), Positives = 94/259 (36%), Gaps = 40/259 (15%)
Query 66 GSGPSTFTMS-GVTDL---------TTSSTISKDGYTYYQIPSAKITPTAAAANL----- 110
G+GP T S GVT+ TT + G T S+ +P A A++
Sbjct 311 GAGPGTTASSVGVTETARPSVAGSGTTGTVSGASGST----GSSSGSPGATGASIGQPET 366
Query 111 -KVYLAFSVKDNQDSATEYLVDSASTTYTIYTGASDTRGIRLQNVRLLVTG------LGN 163
++ +A S S+ S T GA T G+ + G +G
Sbjct 367 SRISVAGSSGAPAVSSGASQAAGTSEATTSIEGAG-TSGVGFKTEATTFPGENETTRVGI 425
Query 164 TAGTYTISSLKLGNFSAKGSASTTATTAIVLNSATF-QITKSTCVINNGAAINVTLPTVP 222
GT I S K GS +T ATT+I + T + T ++ G + + + + P
Sbjct 426 ATGTTGIVSRKT---LEPGSYNTEATTSIGRSGTTHTDLPGGTTIVLPGFS-HSSQSSKP 481
Query 223 NSTFTTIG------QTVGDTTFNVSVTGCGSSDANKTLVALLTDNNNASASNTNGLLKNT 276
S+ TT G +T F+ +V S T + S T G L T
Sbjct 482 GSSVTTPGSPESGSETGTSGEFSTTVISGSSHTEATTFIGGSGSPGTGSRPGTTGELSGT 541
Query 277 --YSTNVSVQITDSAGTAL 293
S N + + T S T +
Sbjct 542 TIASGNATTEATTSTETRI 560
>Q54SK5 Hybrid signal transduction histidine kinase M [Dictyostelium
discoideum]
Length=2388
Score = 37.7 bits (86), Expect = 6e-06
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 14/112 (13%)
Query 209 NNGAAINVTLPTVPNSTFTTIGQTVGD-----TTFNVSVTGCGSSDAN--KTLVALLTDN 261
N+ +IN LP N+T TT T T+ N S GS+ +N K+ ++ L +
Sbjct 1962 NSTISINPPLPETNNNTTTTTTTTQPKKSPILTSSNGSDKSEGSTGSNRSKSRISFLNSS 2021
Query 262 NNASASNTNGLLKNTYSTNVSVQITDSAGTALPIAPKSIDSSSSFFSFGTIG 313
N+ GLLKN ++ + S G +P + ++ DSSSS S + G
Sbjct 2022 NS-------GLLKNNLGEDIYCKGDQSEGIPIPKSERTSDSSSSSSSSDSHG 2066
Score = 35.8 bits (81), Expect = 2e-05
Identities = 33/120 (28%), Positives = 51/120 (43%), Gaps = 8/120 (7%)
Query 194 LNSATF-QITKSTCVINNGAAINVTLPTVPNSTFTTIGQTVGDTTFNVSVTGCGSSDANK 252
LN+A Q+T + NN N + T PNST + G T D N S GS D N
Sbjct 1751 LNNANIPQLTNDIGITNNNINNNSLMFTTPNSTLSNNGITGLD---NNSNNDTGSIDNNS 1807
Query 253 TLVALLTDNNNASASNTNGLLKNTYSTNVSVQITDSAGTALPIAPKSIDSSSSFFSFGTI 312
+ + +NN+ N +N +T + + G + PKS+ S+ S+ +
Sbjct 1808 NISTNIDNNNDYFIRNNGIPPQNDMNTYNNYVLNHQQG----VLPKSLSVPSTPLSYNML 1863
Score = 27.7 bits (60), Expect = 0.007
Identities = 15/42 (36%), Positives = 20/42 (48%), Gaps = 0/42 (0%)
Query 239 NVSVTGCGSSDANKTLVALLTDNNNASASNTNGLLKNTYSTN 280
N + +GCGS N +NNN + SN N N+ S N
Sbjct 149 NNNNSGCGSGSLNSVNNNNNNNNNNNNNSNNNNSNSNSNSNN 190
Score = 25.0 bits (53), Expect = 0.051
Identities = 13/46 (28%), Positives = 21/46 (46%), Gaps = 0/46 (0%)
Query 235 DTTFNVSVTGCGSSDANKTLVALLTDNNNASASNTNGLLKNTYSTN 280
+T N++ S+ N + L +NNN S +N N N +N
Sbjct 1342 NTNININTNNNNDSNNNNCINNDLKNNNNNSNNNVNNNNNNINDSN 1387
Score = 24.6 bits (52), Expect = 0.067
Identities = 45/217 (21%), Positives = 78/217 (36%), Gaps = 59/217 (27%)
Query 126 TEYLVDSASTTYTIYTGASDTRGIRL----------QNVRLLVTGLGNTAGTYTISSLKL 175
+E DS+S++ + + D RL Q+ L ++G T+GT +++ +
Sbjct 2049 SERTSDSSSSSSSSDSHGQDDHSYRLEDFSISSPSSQSPLLDLSGTSGTSGTTNLANSGI 2108
Query 176 GNFSAKGSASTTATTAIVLNSATFQ-------------------ITKSTC---------V 207
+ S G ++ ++ FQ I+ S+ +
Sbjct 2109 NSGSGSGGGDIINQNQLITSNQLFQQQLQQQQQPQQQQPPGTPTISPSSSFPLLPIPRDI 2168
Query 208 INNGAAINVTLPTVPNSTFTTIGQTVGDTTFNVSVTGCGSSDANKTLVALLT-------- 259
IN+ A + V +ST V F+ S TG GSS A+ L++
Sbjct 2169 INSSGASSGI--KVKSSTSIPDYVQVSPRRFSGSSTGSGSSVASPQLLSTSNQLNNNINN 2226
Query 260 -----------DNNNASASNTNGLLKNTYSTNVSVQI 285
+NNN + +NTN N N +V I
Sbjct 2227 LNLNSNNNNNNNNNNNNNNNTNNDNNNNNDNNYNVNI 2263
Score = 22.7 bits (47), Expect = 0.26
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 9/95 (9%)
Query 195 NSATFQITKSTCVINNGAAINVTLPTVPNSTFTTIGQ---TVGDTTFNVSVTGCGSS--- 248
NS + Q ++ N+G + + T NS T + T G T + T +S
Sbjct 58 NSISTQSLQTINECNSGGEQSPKIKTNNNSYNTPVSSSTSTTGTNTTPMKSTPIHNSLQN 117
Query 249 ---DANKTLVALLTDNNNASASNTNGLLKNTYSTN 280
+AN++ + +NNN + +N N N + N
Sbjct 118 IFKNANRSNLNNNNNNNNNNNNNNNNNNNNNNNNN 152
Score = 22.3 bits (46), Expect = 0.35
Identities = 37/154 (24%), Positives = 63/154 (41%), Gaps = 18/154 (12%)
Query 170 ISSLKLGNFSAKGSASTTATTAIVLNSATFQITKSTCVINNGAA-INVTLPTVPNSTFTT 228
ISS LGN ++ S + TT I + + F + S+ ++ + +N PN+
Sbjct 338 ISSQSLGNIFSQISPNIALTTNISPHGSPFSSSSSSRKSSSSPSFLNQNNQNNPNNQNNQ 397
Query 229 IGQTV--GDTTFNVSVTGCGSSDANKTLVALLTDN----------NNASAS--NTNGLLK 274
T + N S +D +K L LT N N++S+S N N
Sbjct 398 NNSTSPHEKSFLNNSNDSFDYNDNSKRLRNRLTRNTGYSSTGSIGNSSSSSFYNNNNENS 457
Query 275 NTYSTNVSVQITDSAGTALPIAPKSIDSSSSFFS 308
N YS ++ T S+ +PK +S + ++
Sbjct 458 NIYS---KIKHTRSSSGGNKPSPKYFQTSQAIYT 488
Score = 21.9 bits (45), Expect = 0.46
Identities = 19/75 (25%), Positives = 32/75 (43%), Gaps = 5/75 (7%)
Query 208 INNGAAINVTLPTVPNSTFTTIGQTVGDTTFNVSVTGCGSSDANKTLVALLTDNNNASAS 267
I N IN + NS+ T + D F+ ++ ++D N + +NNN + +
Sbjct 749 ITNNNNINNNIDNNNNSSSNT--KINNDLNFDNNIK---NNDINNNITNNNNNNNNNNNN 803
Query 268 NTNGLLKNTYSTNVS 282
N N N + N S
Sbjct 804 NNNTNNNNNNNNNNS 818
Score = 21.9 bits (45), Expect = 0.46
Identities = 14/76 (18%), Positives = 32/76 (42%), Gaps = 3/76 (4%)
Query 209 NNGAAINVTLPTVPNSTFTTIGQTVGDTTFNVSVTGCGSSDANKTLVALLTDNNNASASN 268
NN IN+ N+ + + + N + + + N + +NNN++ +N
Sbjct 1340 NNNTNININ---TNNNNDSNNNNCINNDLKNNNNNSNNNVNNNNNNINDSNNNNNSNNNN 1396
Query 269 TNGLLKNTYSTNVSVQ 284
N + N + N +++
Sbjct 1397 INNNINNNINNNNNIK 1412
Score = 21.9 bits (45), Expect = 0.46
Identities = 22/115 (19%), Positives = 45/115 (39%), Gaps = 18/115 (16%)
Query 204 STCVINNGAAINVTLPTVPNSTFTTIGQTVGDTTFNVSVT-----------GCGSSDANK 252
ST + N+G + +PT N+ I + + S+ G +++ N
Sbjct 1713 STGIGNSGLINSNNIPTPVNTPSNIIPNLLSCQSLLTSLNNANIPQLTNDIGITNNNINN 1772
Query 253 TLVALLTDNNNASASNTNGLLKNTYSTNVSVQITDSAGTALPIAPKSIDSSSSFF 307
+ T N+ S + GL N+ + S+ + T +ID+++ +F
Sbjct 1773 NSLMFTTPNSTLSNNGITGLDNNSNNDTGSIDNNSNIST-------NIDNNNDYF 1820
Score = 21.6 bits (44), Expect = 0.60
Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 0/50 (0%)
Query 260 DNNNASASNTNGLLKNTYSTNVSVQITDSAGTALPIAPKSIDSSSSFFSF 309
DNNN + +N N N + N + + S+ + + S+ S +F+ F
Sbjct 518 DNNNTNNNNNNNNNNNNNNNNNNNESFFSSKGTMNLIHISLLSVLAFYIF 567
Score = 21.6 bits (44), Expect = 0.60
Identities = 8/20 (40%), Positives = 12/20 (60%), Gaps = 0/20 (0%)
Query 261 NNNASASNTNGLLKNTYSTN 280
NNN +++N N N +TN
Sbjct 832 NNNTNSNNNNNNSSNNNNTN 851
Score = 21.2 bits (43), Expect = 0.79
Identities = 7/20 (35%), Positives = 13/20 (65%), Gaps = 0/20 (0%)
Query 260 DNNNASASNTNGLLKNTYST 279
+NNN + +N N + N ++T
Sbjct 14 NNNNNNNNNNNNNINNNFNT 33
Score = 21.2 bits (43), Expect = 0.79
Identities = 11/34 (32%), Positives = 16/34 (47%), Gaps = 0/34 (0%)
Query 247 SSDANKTLVALLTDNNNASASNTNGLLKNTYSTN 280
SS+ N T + DN N + +N N N + N
Sbjct 844 SSNNNNTNNNKINDNKNNNNNNNNNNNNNNNNNN 877
Score = 20.8 bits (42), Expect = 1.0
Identities = 8/22 (36%), Positives = 13/22 (59%), Gaps = 0/22 (0%)
Query 259 TDNNNASASNTNGLLKNTYSTN 280
++NNN ++SN N N + N
Sbjct 837 SNNNNNNSSNNNNTNNNKINDN 858
Score = 20.8 bits (42), Expect = 1.0
Identities = 8/26 (31%), Positives = 14/26 (54%), Gaps = 0/26 (0%)
Query 260 DNNNASASNTNGLLKNTYSTNVSVQI 285
+NNN + +N N N + N ++ I
Sbjct 1322 NNNNNNNNNNNNNNNNNSNNNTNINI 1347
Score = 20.8 bits (42), Expect = 1.0
Identities = 7/29 (24%), Positives = 17/29 (59%), Gaps = 0/29 (0%)
Query 260 DNNNASASNTNGLLKNTYSTNVSVQITDS 288
+NNN + +N N + +TN+++ ++
Sbjct 1324 NNNNNNNNNNNNNNNSNNNTNININTNNN 1352
Score = 20.0 bits (40), Expect = 1.8
Identities = 8/21 (38%), Positives = 14/21 (67%), Gaps = 0/21 (0%)
Query 260 DNNNASASNTNGLLKNTYSTN 280
+NNN++ +++N KN S N
Sbjct 256 NNNNSNNNSSNNNNKNNSSKN 276
Score = 19.6 bits (39), Expect = 2.4
Identities = 7/24 (29%), Positives = 14/24 (58%), Gaps = 0/24 (0%)
Query 260 DNNNASASNTNGLLKNTYSTNVSV 283
+NNN + +N N + N +T+ +
Sbjct 15 NNNNNNNNNNNNINNNFNTTDFKI 38
Score = 19.6 bits (39), Expect = 2.4
Identities = 11/32 (34%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Query 251 NKTLVALLTDNNNASASNTNGLLKNTYSTNVS 282
+ TL+ ++NNN + +N N N S N S
Sbjct 235 SSTLLNFSSNNNNNNNNNNNN--NNNNSNNNS 264
Score = 19.6 bits (39), Expect = 2.4
Identities = 8/22 (36%), Positives = 13/22 (59%), Gaps = 0/22 (0%)
Query 259 TDNNNASASNTNGLLKNTYSTN 280
++NNN + +N + NT S N
Sbjct 818 SNNNNNNNNNNSNKNNNTNSNN 839
Score = 19.6 bits (39), Expect = 2.4
Identities = 8/24 (33%), Positives = 15/24 (63%), Gaps = 0/24 (0%)
Query 247 SSDANKTLVALLTDNNNASASNTN 270
++++NK +NNN S++N N
Sbjct 826 NNNSNKNNNTNSNNNNNNSSNNNN 849
Score = 19.2 bits (38), Expect = 3.1
Identities = 10/29 (34%), Positives = 15/29 (52%), Gaps = 3/29 (10%)
Query 259 TDNNNASASNTNGLLKNTYSTNVSVQITD 287
T+NNN + +N N N + N + TD
Sbjct 10 TENNNNNNNNNN---NNNNNINNNFNTTD 35
Score = 19.2 bits (38), Expect = 3.1
Identities = 8/21 (38%), Positives = 12/21 (57%), Gaps = 0/21 (0%)
Query 260 DNNNASASNTNGLLKNTYSTN 280
+NNN + +N N N S+N
Sbjct 246 NNNNNNNNNNNNNNSNNNSSN 266
Score = 19.2 bits (38), Expect = 3.1
Identities = 8/21 (38%), Positives = 11/21 (52%), Gaps = 0/21 (0%)
Query 260 DNNNASASNTNGLLKNTYSTN 280
+NNN + +N N N S N
Sbjct 247 NNNNNNNNNNNNNSNNNSSNN 267
Score = 19.2 bits (38), Expect = 3.1
Identities = 8/25 (32%), Positives = 13/25 (52%), Gaps = 0/25 (0%)
Query 256 ALLTDNNNASASNTNGLLKNTYSTN 280
+L +N+N +NTN N + N
Sbjct 509 SLSKENDNVDNNNTNNNNNNNNNNN 533
Score = 18.9 bits (37), Expect = 4.1
Identities = 9/39 (23%), Positives = 20/39 (51%), Gaps = 0/39 (0%)
Query 232 TVGDTTFNVSVTGCGSSDANKTLVALLTDNNNASASNTN 270
+V + N + S++ N + +NNN++++N N
Sbjct 162 SVNNNNNNNNNNNNNSNNNNSNSNSNSNNNNNSNSNNNN 200
Score = 18.9 bits (37), Expect = 4.1
Identities = 8/18 (44%), Positives = 11/18 (61%), Gaps = 0/18 (0%)
Query 259 TDNNNASASNTNGLLKNT 276
++NNN S SN N N+
Sbjct 188 SNNNNNSNSNNNNNNSNS 205
Score = 18.9 bits (37), Expect = 4.1
Identities = 8/21 (38%), Positives = 11/21 (52%), Gaps = 0/21 (0%)
Query 260 DNNNASASNTNGLLKNTYSTN 280
+NNN S +N N N+ N
Sbjct 813 NNNNNSNNNNNNNNNNSNKNN 833
Score = 18.9 bits (37), Expect = 4.1
Identities = 8/21 (38%), Positives = 12/21 (57%), Gaps = 0/21 (0%)
Query 260 DNNNASASNTNGLLKNTYSTN 280
+NN+ +NTN N S+N
Sbjct 826 NNNSNKNNNTNSNNNNNNSSN 846
Score = 18.9 bits (37), Expect = 4.1
Identities = 8/26 (31%), Positives = 14/26 (54%), Gaps = 0/26 (0%)
Query 260 DNNNASASNTNGLLKNTYSTNVSVQI 285
+NNN + +N N N ++N + I
Sbjct 1320 NNNNNNNNNNNNNNNNNNNSNNNTNI 1345
Score = 18.9 bits (37), Expect = 4.1
Identities = 9/27 (33%), Positives = 13/27 (48%), Gaps = 0/27 (0%)
Query 260 DNNNASASNTNGLLKNTYSTNVSVQIT 286
+NNN + N N LL N + +T
Sbjct 2252 NNNNDNNYNVNILLVEDNLVNAKIAMT 2278
Score = 18.5 bits (36), Expect = 5.4
Identities = 8/24 (33%), Positives = 12/24 (50%), Gaps = 0/24 (0%)
Query 259 TDNNNASASNTNGLLKNTYSTNVS 282
+ NNN + +N N N + N S
Sbjct 242 SSNNNNNNNNNNNNNNNNSNNNSS 265
Score = 18.5 bits (36), Expect = 5.4
Identities = 7/21 (33%), Positives = 12/21 (57%), Gaps = 0/21 (0%)
Query 260 DNNNASASNTNGLLKNTYSTN 280
+NNN + +N N N+ + N
Sbjct 248 NNNNNNNNNNNNSNNNSSNNN 268
Score = 18.5 bits (36), Expect = 5.4
Identities = 8/23 (35%), Positives = 13/23 (57%), Gaps = 0/23 (0%)
Query 260 DNNNASASNTNGLLKNTYSTNVS 282
+NNN + +N+N N + N S
Sbjct 251 NNNNNNNNNSNNNSSNNNNKNNS 273
Score = 18.5 bits (36), Expect = 5.4
Identities = 7/20 (35%), Positives = 12/20 (60%), Gaps = 0/20 (0%)
Query 251 NKTLVALLTDNNNASASNTN 270
NK + +DN+N+ +N N
Sbjct 735 NKNKINDKSDNSNSITNNNN 754
Score = 18.5 bits (36), Expect = 5.4
Identities = 7/21 (33%), Positives = 12/21 (57%), Gaps = 0/21 (0%)
Query 260 DNNNASASNTNGLLKNTYSTN 280
+NNN +++N N N + N
Sbjct 812 NNNNNNSNNNNNNNNNNSNKN 832
Score = 18.1 bits (35), Expect = 7.1
Identities = 7/18 (39%), Positives = 10/18 (56%), Gaps = 0/18 (0%)
Query 260 DNNNASASNTNGLLKNTY 277
+NN+ S +N N N Y
Sbjct 191 NNNSNSNNNNNNSNSNAY 208
Score = 18.1 bits (35), Expect = 7.1
Identities = 10/40 (25%), Positives = 19/40 (48%), Gaps = 0/40 (0%)
Query 236 TTFNVSVTGCGSSDANKTLVALLTDNNNASASNTNGLLKN 275
T N S +++ N ++NN+++ +N N KN
Sbjct 237 TLLNFSSNNNNNNNNNNNNNNNNSNNNSSNNNNKNNSSKN 276
Score = 18.1 bits (35), Expect = 7.1
Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 0/34 (0%)
Query 247 SSDANKTLVALLTDNNNASASNTNGLLKNTYSTN 280
+S+ N + +NN+++ +NTN N N
Sbjct 828 NSNKNNNTNSNNNNNNSSNNNNTNNNKINDNKNN 861
Score = 18.1 bits (35), Expect = 7.1
Identities = 7/14 (50%), Positives = 9/14 (64%), Gaps = 0/14 (0%)
Query 114 LAFSVKDNQDSATE 127
L+ +KDNQD E
Sbjct 1286 LSDKIKDNQDENLE 1299
Score = 18.1 bits (35), Expect = 7.1
Identities = 7/21 (33%), Positives = 11/21 (52%), Gaps = 0/21 (0%)
Query 260 DNNNASASNTNGLLKNTYSTN 280
+NNN + +N N N + N
Sbjct 1316 ENNNNNNNNNNNNNNNNNNNN 1336
Score = 18.1 bits (35), Expect = 7.1
Identities = 8/23 (35%), Positives = 12/23 (52%), Gaps = 0/23 (0%)
Query 260 DNNNASASNTNGLLKNTYSTNVS 282
+NNN + +N N N + N S
Sbjct 1317 NNNNNNNNNNNNNNNNNNNNNNS 1339
Score = 17.7 bits (34), Expect = 9.3
Identities = 8/19 (42%), Positives = 10/19 (53%), Gaps = 0/19 (0%)
Query 260 DNNNASASNTNGLLKNTYS 278
+NNN + SN N N S
Sbjct 811 NNNNNNNSNNNNNNNNNNS 829
Score = 17.7 bits (34), Expect = 9.3
Identities = 7/21 (33%), Positives = 11/21 (52%), Gaps = 0/21 (0%)
Query 260 DNNNASASNTNGLLKNTYSTN 280
+NNN + +N N N + N
Sbjct 861 NNNNNNNNNNNNNNNNNNNNN 881
>P13429 S-fimbrial protein subunit SfaG [Escherichia coli O6:K15:H31
(strain 536 / UPEC)]
Length=175
Score = 34.7 bits (78), Expect = 2e-05
Identities = 46/183 (25%), Positives = 68/183 (37%), Gaps = 21/183 (11%)
Query 173 LKLGNFSAKGSASTTATTAIVLNSATFQIT----KSTCVIN-NGAAINVTLPTVPNSTFT 227
+K FS + S T + + IT +TC ++ N +V+L + + FT
Sbjct 6 IKTVTFSCMLAGSMFVTCHVCAAGSVVNITGNVQDNTCDVDINSRNFDVSLGSYDSRQFT 65
Query 228 TIGQTVGDTTFNVSVTGCGSS-DANKTLVALLTDNNNASASNTNGLLKNTYSTNVSVQIT 286
G T + F+V +T CGS+ A K DN A N + + V +Q+
Sbjct 66 AAGDTTPASVFHVGLTSCGSAVRAVKLTFTGTPDNQEAGLIQINSI---NGARGVGIQLL 122
Query 287 DSAGTALPI-APKSIDSSSSFFSFGTIGSGGAVSKAFKARYYSNVAAVPATLVQAQATIT 345
D L I P +I G + AF AR + V A V A
Sbjct 123 DKDKHELKINVPTTIALMP-----------GTQTIAFYARLKATYLPVKAGNVDAVVNFV 171
Query 346 LIY 348
L Y
Sbjct 172 LDY 174
Lambda K H a alpha
0.313 0.124 0.341 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1852956
Database: 08c9bc0fcff8691cf9f8c880adeed078.SwissProt.fasta
Posted date: Jun 1, 2024 2:23 PM
Number of letters in database: 6,450
Number of sequences in database: 6
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
