BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 93f492216d19db6d54d8981e811c8833.SwissProt.fasta
10 sequences; 4,026 total letters
Query= ACIAD0411
Length=402
Score E
Sequences producing significant alignments: (Bits) Value
Q00513 Type II secretion system protein F [Pseudomonas aeruginosa... 370 5e-130
P31705 Type II secretion system protein F [Pectobacterium carotov... 347 1e-120
P45780 Type II secretion system protein F [Vibrio cholerae seroty... 330 4e-114
P31743 Type II secretion system protein F [Aeromonas hydrophila] 311 3e-107
P15745 Type II secretion system protein F [Klebsiella pneumoniae] 308 6e-106
P31704 Type II secretion system protein F [Dickeya chrysanthemi] 300 1e-102
P41441 Putative type II secretion system protein F [Escherichia c... 251 2e-83
Q5SK58 Type IV pilus assembly protein PilC [Thermus thermophilus ... 216 1e-69
P45793 Type IV pilus assembly protein TapC [Aeromonas hydrophila] 206 6e-66
Q1D0A0 Type IV pilus assembly protein PilC [Myxococcus xanthus (s... 198 6e-63
>Q00513 Type II secretion system protein F [Pseudomonas aeruginosa
(strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847
/ LMG 12228 / 1C / PRS 101 / PAO1)]
Length=405
Score = 370 bits (951), Expect = 5e-130
Identities = 201/405 (50%), Positives = 284/405 (70%), Gaps = 5/405 (1%)
Query 1 MPAYQFTALDASGKQQKGVLEGDSARQIRQQLRDREWTPIAVDPVEQKDK--RQGNTWFQ 58
M A+++ ALD SG+QQKGVLE DSARQ+RQ LR+R+ P+ V P +++ + G F
Sbjct 1 MAAFEYLALDPSGRQQKGVLEADSARQVRQLLRERQLAPLDVKPTRTREQSGQGGRLTFA 60
Query 59 KKVTAYDLALMTRQLSVLVAAAIPLEEALRAVAKQSEKAHVQNLLLSVRSKVLEGHSLAQ 118
+ ++A DLAL+TRQL+ LV AA+P+EEALRA A QS +Q++LL+VR+KVLEGHSLA
Sbjct 61 RGLSARDLALVTRQLATLVQAALPIEEALRAAAAQSTSQRIQSMLLAVRAKVLEGHSLAG 120
Query 119 GMQQ-SGRFPDLYIATIAAGERSGHLDLILDQLADYTENRFAMQKKVQGAMIYPIILMLM 177
+++ FP+LY AT+AAGE +GHL +L+QLADYTE R ++K+Q A++YP+ILM+
Sbjct 121 SLREFPTAFPELYRATVAAGEHAGHLGPVLEQLADYTEQRQQSRQKIQLALLYPVILMVA 180
Query 178 SFAIVMGLMTYVVPDIVKTFDQSKEALPWITVALMKASDFIRLAWPFLMSFGVIAIILFI 237
S AIV L+ YVVPD+V+ F S + LP +T L+ SD+++ AW L I ++
Sbjct 181 SLAIVGFLLGYVVPDVVRVFIDSGQTLPLLTRVLIGVSDWVK-AWGALAFVAAIGGVIGF 239
Query 238 RF-LRTHAGHYAFDRLTLRLPLFGKLSRGINSARFASTLSILTQSGVPLVDALRIGAAVS 296
R+ LR A + LR+PL G+L R ++ARFASTL+ILT+SGVPLV+AL I A V
Sbjct 240 RYALRKDAFRERWHGFLLRVPLVGRLVRSTDTARFASTLAILTRSGVPLVEALAIAAEVI 299
Query 297 SNWVIRDAINHAAEKVTEGGNLGTQLERCGYFPPMMVQMIRSGETSGELDRMLERASTMQ 356
+N +IR+ + AA+KV EG +L LE G FPPMM+ MI SGE SGELD+ML R + Q
Sbjct 300 ANRIIRNEVVKAAQKVREGASLTRSLEATGQFPPMMLHMIASGERSGELDQMLARTARNQ 359
Query 357 DREVTTFISTLLALLEPLMLVLMAAIVLVIVIAVMLPIVNMNNMI 401
+ ++ I ++ L EP ML+ M A+VLVIV+A++LPI+++N ++
Sbjct 360 ENDLAAQIGLMVGLFEPFMLIFMGAVVLVIVLAILLPILSLNQLV 404
>P31705 Type II secretion system protein F [Pectobacterium carotovorum
subsp. carotovorum]
Length=408
Score = 347 bits (889), Expect = 1e-120
Identities = 194/406 (48%), Positives = 267/406 (66%), Gaps = 5/406 (1%)
Query 1 MPAYQFTALDASGKQQKGVLEGDSARQIRQQLRDREWTPIAVDPVEQKDKRQGNTWFQKK 60
M Y + ALDA GK+ +G E DSARQ RQ LR+R P++VD ++ G+T +
Sbjct 1 MAQYHYQALDAQGKKCRGTQEADSARQARQLLRERGLVPLSVDENRGDQQKSGSTGLSLR 60
Query 61 ----VTAYDLALMTRQLSVLVAAAIPLEEALRAVAKQSEKAHVQNLLLSVRSKVLEGHSL 116
++ DLAL+TRQL+ LVAA++PLEEAL AVAKQSEK H+ L+ +VRSKV+EGHSL
Sbjct 61 RKIRLSTSDLALLTRQLATLVAASMPLEEALDAVAKQSEKPHLSQLMAAVRSKVMEGHSL 120
Query 117 AQGMQQ-SGRFPDLYIATIAAGERSGHLDLILDQLADYTENRFAMQKKVQGAMIYPIILM 175
A M+ G F LY A +AAGE SGHLD +L++LADYTE R M+ ++Q AMIYP +L
Sbjct 121 ADAMKCFPGSFERLYCAMVAAGETSGHLDAVLNRLADYTEQRQQMRSRIQQAMIYPCVLT 180
Query 176 LMSFAIVMGLMTYVVPDIVKTFDQSKEALPWITVALMKASDFIRLAWPFLMSFGVIAIIL 235
+++ A+V L++ VVP +V+ F K+ALP T LM SD +R P+++ + +
Sbjct 181 VVAIAVVSILLSVVVPKVVEQFIHMKQALPLSTRVLMGMSDAVRTFGPWMLLALLAGFMA 240
Query 236 FIRFLRTHAGHYAFDRLTLRLPLFGKLSRGINSARFASTLSILTQSGVPLVDALRIGAAV 295
F LR +F R L LPL G+++RG+N+AR+A TLSIL S VPL+ A+RI V
Sbjct 241 FRVMLRQEKRRVSFHRRLLHLPLIGRIARGLNTARYARTLSILNASAVPLLQAMRISGDV 300
Query 296 SSNWVIRDAINHAAEKVTEGGNLGTQLERCGYFPPMMVQMIRSGETSGELDRMLERASTM 355
SN R ++ A + V EG +L LE+ FPPMM MI SGE SGELD MLERA+
Sbjct 301 MSNDYARHRLSLATDAVREGVSLHKALEQTALFPPMMRHMIASGERSGELDSMLERAADN 360
Query 356 QDREVTTFISTLLALLEPLMLVLMAAIVLVIVIAVMLPIVNMNNMI 401
QDRE ++ ++ L L EPL++V MAA+VL IV+A++ PI+ +N ++
Sbjct 361 QDREFSSQMTLALGLFEPLLVVSMAAVVLFIVLAILQPILQLNTLM 406
>P45780 Type II secretion system protein F [Vibrio cholerae serotype
O1 (strain ATCC 39315 / El Tor Inaba N16961)]
Length=406
Score = 330 bits (846), Expect = 4e-114
Identities = 177/405 (44%), Positives = 269/405 (66%), Gaps = 5/405 (1%)
Query 1 MPAYQFTALDASGKQQKGVLEGDSARQIRQQLRDREWTPIAVDPVEQKDKRQGNTWFQKK 60
M A+++ ALDA G+ +KGV+EGD+ARQ+RQ+L+++ P+ V + K R + F K
Sbjct 1 MAAFEYKALDAKGRHKKGVIEGDNARQVRQRLKEQSLVPMEVVETQVKAARSRSQGFAFK 60
Query 61 --VTAYDLALMTRQLSVLVAAAIPLEEALRAVAKQSEKAHVQNLLLSVRSKVLEGHSLAQ 118
++ DLAL+TRQL+ LV + +PLEE LRAVA+QSEK ++ +L++VR+KV EG++L+
Sbjct 61 RGISTPDLALITRQLATLVQSGMPLEECLRAVAEQSEKPRIRTMLVAVRAKVTEGYTLSD 120
Query 119 GMQQSGR-FPDLYIATIAAGERSGHLDLILDQLADYTENRFAMQKKVQGAMIYPIILMLM 177
+ F +L+ + +AAGE+SGHLD +L++LADY ENR M+ K+Q AMIYP++L++
Sbjct 121 SLGDYPHVFDELFRSMVAAGEKSGHLDSVLERLADYAENRQKMRSKLQQAMIYPVVLVVF 180
Query 178 SFAIVMGLMTYVVPDIVKTFDQSKEALPWITVALMKASDFIRLAWPFLMSFGVIAIILFI 237
+ IV L+ VVP IV F Q +ALP T L+ ASDF++ W + G++ +I +
Sbjct 181 AVGIVAFLLAAVVPKIVGQFVQMGQALPASTQFLLDASDFLQ-HWGISLLVGLLMLIYLV 239
Query 238 RFLRTHAG-HYAFDRLTLRLPLFGKLSRGINSARFASTLSILTQSGVPLVDALRIGAAVS 296
R+L T +DR + LP+ GK++RG+N+ARFA TLSI T S +P++D +R+ V
Sbjct 240 RWLLTKPDIRLRWDRRVISLPVIGKIARGLNTARFARTLSICTSSAIPILDGMRVAVDVM 299
Query 297 SNWVIRDAINHAAEKVTEGGNLGTQLERCGYFPPMMVQMIRSGETSGELDRMLERASTMQ 356
+N ++ + AAE V EG +L LE+ FPPMM+ MI SGE SGEL+ ML RA+ Q
Sbjct 300 TNQFVKQQVLAAAENVREGSSLRKALEQTKLFPPMMLHMIASGEQSGELEGMLTRAADNQ 359
Query 357 DREVTTFISTLLALLEPLMLVLMAAIVLVIVIAVMLPIVNMNNMI 401
D + ++ L + P ++ LMA +VL IV+A ++PI+ MNN++
Sbjct 360 DNSFESTVNIALGIFTPALIALMAGMVLFIVMATLMPILEMNNLM 404
>P31743 Type II secretion system protein F [Aeromonas hydrophila]
Length=388
Score = 311 bits (798), Expect = 3e-107
Identities = 177/389 (46%), Positives = 259/389 (67%), Gaps = 13/389 (3%)
Query 21 EGDSARQIRQQLRDREWTPIAVDPVEQKDKRQGNTW--FQKKVTAYDLALMTRQLSVLVA 78
EGDSARQ+RQQLR++ TP+ V+ +K KR+ N + F++ + +LAL+TRQL+ LV
Sbjct 3 EGDSARQVRQQLREQGLTPLEVNETTEKAKREANRFVLFRRGASTSELALITRQLATLVG 62
Query 79 AAIPLEEALRAVAKQSEKAHVQNLLLSVRSKVLEGHSLAQGMQQSGRFP----DLYIATI 134
A + +EEALRAVA+Q EKAH+++L+ +VRSKV+EG+SLA + G FP L+ + +
Sbjct 63 AGLTIEEALRAVAEQCEKAHLRSLVATVRSKVVEGYSLADSL---GAFPHVFDQLFRSMV 119
Query 135 AAGERSGHLDLILDQLADYTENRFAMQKKVQGAMIYPIILMLMSFAIVMGLMTYVVPDIV 194
AAGE+SGHL+ +L++LADYTE R M+ K+ AMIYPI+L L++ ++ L+T VVP +V
Sbjct 120 AAGEKSGHLEKVLNRLADYTEQRQHMRTKLLQAMIYPIVLTLVAVGVISILLTAVVPKVV 179
Query 195 KTFDQSKEALPWITVALMKASDFIRL--AWPFLMSFGVIAIILFIRFLRTHAGHYAFDRL 252
F+ + LP T L+ S+ ++ W L+ F I ++ +L + ++
Sbjct 180 AQFEHMGQQLPATTRFLIGTSELMQHYGLWFLLLLF--IGGFVWRWWLTDEKRRRHWHQV 237
Query 253 TLRLPLFGKLSRGINSARFASTLSILTQSGVPLVDALRIGAAVSSNWVIRDAINHAAEKV 312
LRLP+ G++SRG+N+ARFA TLSIL S VPL++ ++I V SN R I A E+V
Sbjct 238 VLRLPVIGRVSRGLNTARFARTLSILNASAVPLLEGMKIAGEVLSNDFARTRIGEATERV 297
Query 313 TEGGNLGTQLERCGYFPPMMVQMIRSGETSGELDRMLERASTMQDREVTTFISTLLALLE 372
EG +L L+ FPPMM+ MI SGE SGELD MLERA+ QDRE T ++ L + E
Sbjct 298 REGTSLRKALDETKIFPPMMLHMIASGEQSGELDSMLERAADNQDREFETQVNIALGVFE 357
Query 373 PLMLVLMAAIVLVIVIAVMLPIVNMNNMI 401
PL++V MA +VL IV++++ PI+ +NNM+
Sbjct 358 PLLVVSMAGVVLFIVMSILQPILELNNMV 386
>P15745 Type II secretion system protein F [Klebsiella pneumoniae]
Length=381
Score = 308 bits (789), Expect = 6e-106
Identities = 181/403 (45%), Positives = 258/403 (64%), Gaps = 26/403 (6%)
Query 1 MPAYQFTALDASGKQQKGVLEGDSARQIRQQLRDREWTPIAVDPVEQKDKRQGNTWFQKK 60
M +++ ALD GK ++GV + DSAR RQ LR++ W + +DP + F ++
Sbjct 1 MALFRYQALDEQGKPRRGVQQADSARHARQLLREKGWLALDIDPAAGGGRPSR---FMRR 57
Query 61 VTAYDLALMTRQLSVLVAAAIPLEEALRAVAKQSEKAHVQNLLLSVRSKVLEGHSLAQGM 120
+A DLAL+TRQL+ LVAAAIPLE+AL AVA+QSEK ++ L+ VR KVLEGHSLA+ M
Sbjct 58 TSARDLALVTRQLATLVAAAIPLEKALDAVAQQSEKPQLKTLIAGVRGKVLEGHSLAEAM 117
Query 121 Q-QSGRFPDLYIATIAAGERSGHLDLILDQLADYTENRFAMQKKVQGAMIYPIILMLMSF 179
+ G F LY A +AAGE SGH ++ AMIYPI+L L++
Sbjct 118 RGHPGCFDALYCAMVAAGEASGH--------------------RLLQAMIYPIVLTLVAV 157
Query 180 AIVMGLMTYVVPDIVKTFDQSKEALPWITVALMKASDFIRLAWPFLMSFGVIAIILFIRF 239
++++ L++ VVP +V+ F K+ALP+ T LM SD +R A P+L+ ++ +IL +R+
Sbjct 158 SVIVILLSTVVPKVVEQFIHLKQALPFSTRLLMAMSDMLRAAGPWLL-LAILLLILLLRY 216
Query 240 -LRTHAGHYAFDRLTLRLPLFGKLSRGINSARFASTLSILTQSGVPLVDALRIGAAVSSN 298
LR A A+ RL LRLPL G+++R +NSAR+A TLSIL S VPL+ A+RI A V SN
Sbjct 217 LLRQPAKRLAWHRLLLRLPLIGRVARSVNSARYARTLSILNASAVPLLLAMRISADVLSN 276
Query 299 WVIRDAINHAAEKVTEGGNLGTQLERCGYFPPMMVQMIRSGETSGELDRMLERASTMQDR 358
+ + A++ V EG +L LE FPPMM M+ SGE SGEL+ MLERA+ QDR
Sbjct 277 AWAKRQLEAASDAVREGVSLHRALEMTQLFPPMMRYMVASGERSGELNSMLERAADNQDR 336
Query 359 EVTTFISTLLALLEPLMLVLMAAIVLVIVIAVMLPIVNMNNMI 401
+++ I L+L EPL++V MA +VL IV+A++ PI+ +N ++
Sbjct 337 DLSAQIQLALSLFEPLLVVAMAGMVLFIVLAILQPILQLNTLM 379
>P31704 Type II secretion system protein F [Dickeya chrysanthemi]
Length=404
Score = 300 bits (769), Expect = 1e-102
Identities = 180/407 (44%), Positives = 253/407 (62%), Gaps = 11/407 (3%)
Query 1 MPAYQFTALDASGKQQKGVLEGDSARQIRQQLRDREWTPIAVDPVEQKDKRQGNTWFQKK 60
M +Q+ AL+A GK+ +G+ E DSAR RQ LR++ P+ ++ EQ+ + + F
Sbjct 1 MALFQYQALNAQGKKSQGMQEADSARHARQLLREKGLVPVKIE--EQRGEAAPRSGFSLS 58
Query 61 V-----TAYDLALMTRQLSVLVAAAIPLEEALRAVAKQSEKAHVQNLLLSVRSKVLEGHS 115
A DLAL+TRQL+ LVAA +PLEEAL AVAKQSEK + L+ +VR+KV+EGHS
Sbjct 59 FGRSHRIASDLALLTRQLATLVAA-LPLEEALDAVAKQSEKPKLSALMAAVRAKVVEGHS 117
Query 116 LAQGMQQ-SGRFPDLYIATIAAGERSGHLDLILDQLADYTENRFAMQKKVQGAMIYPIIL 174
LA+ M G F LY A +AAGE SGHLD +L++LADYTE R M+ ++Q AMIYP +L
Sbjct 118 LAEAMGNFPGSFERLYCAMVAAGEASGHLDAVLNRLADYTEQRHEMRSRIQQAMIYPCVL 177
Query 175 MLMSFAIVMGLMTYVVPDIVKTFDQSKEALPWITVALMKASDFIRLAWPFLMSFGVIAII 234
L++ ++V L++ VVP +V+ F K+ALP T LM ASD +R P+++ V+AI+
Sbjct 178 TLVAISVVSILLSAVVPKVVEQFIHMKQALPLSTRLLMSASDAVRTYGPWVVLLLVLAIM 237
Query 235 LFIRFLRTHAGHYAFDRLTLRLPLFGKLSRGINSARFASTLSILTQSGVPLVDALRIGAA 294
F LR F R L LP+ G+++RG+N+AR+A TLSIL S VPL+ A+RI
Sbjct 238 GFRVLLRQEKHRLVFHRRLLFLPVVGRVARGLNTARYARTLSILNSSAVPLLQAMRISGD 297
Query 295 VSSNWVIRDAINHAAEKVTEGGNLGTQLERCGYFPPMMVQMIRSGETSGELDRMLERAST 354
V +N R + A + V EG L LE+ FPPMM MI S R +
Sbjct 298 VLTNDYARFRLGQATDAVREGVTLHKALEQTALFPPMMRHMIASERRRAR--RHVNPRGD 355
Query 355 MQDREVTTFISTLLALLEPLMLVLMAAIVLVIVIAVMLPIVNMNNMI 401
QDRE + ++ +L L EPL++V MA IVL IV+A++ PI+ +N ++
Sbjct 356 NQDREFSAQMTLVLGLFEPLLVVSMAGIVLFIVLAILQPILQLNTLM 402
>P41441 Putative type II secretion system protein F [Escherichia
coli (strain K12)]
Length=398
Score = 251 bits (641), Expect = 2e-83
Identities = 144/399 (36%), Positives = 234/399 (59%), Gaps = 5/399 (1%)
Query 4 YQFTALDASGKQQKGVLEGDSARQIRQQLRDREWTPIAVDPVEQKDKRQGNTWFQKKVTA 63
Y++ A+ G++ +G+++ + RQ R +LR+ + + P K G + +++
Sbjct 3 YRYRAMTQDGQKLQGIIDANDERQARLRLREEGLFLLDIRP----QKSSGVKTRRPRISH 58
Query 64 YDLALMTRQLSVLVAAAIPLEEALRAVAKQSEKAHVQNLLLSVRSKVLEGHSLAQGMQQS 123
+L L TRQL+ L AAA+PLEE+L + +QS + ++L VRS +LEGH L+ +Q
Sbjct 59 SELTLFTRQLATLSAAALPLEESLAVIGQQSSNKRLGDVLNQVRSAILEGHPLSDALQHF 118
Query 124 GR-FPDLYIATIAAGERSGHLDLILDQLADYTENRFAMQKKVQGAMIYPIILMLMSFAIV 182
F LY + AGE+SG L +L++LADY ENR ++ K+ ++IYP +L ++ +V
Sbjct 119 PTLFDSLYRTLVKAGEKSGLLAPVLEKLADYNENRQKIRSKLIQSLIYPCMLTTVAIGVV 178
Query 183 MGLMTYVVPDIVKTFDQSKEALPWITVALMKASDFIRLAWPFLMSFGVIAIILFIRFLRT 242
+ L+T VVP I + F K+ LP T L+ SD ++ P L++ I + F +L+
Sbjct 179 IILLTAVVPKITEQFVHMKQQLPLSTRILLGLSDTLQRTGPTLLATVFIVAVGFWLWLKR 238
Query 243 HAGHYAFDRLTLRLPLFGKLSRGINSARFASTLSILTQSGVPLVDALRIGAAVSSNWVIR 302
+ F + LR+ L G L INSAR+ TLSIL SGVPL+D + + +N IR
Sbjct 239 GNNRHRFHAMLLRVALIGPLICAINSARYLRTLSILQSSGVPLLDGMNLSTESLNNLEIR 298
Query 303 DAINHAAEKVTEGGNLGTQLERCGYFPPMMVQMIRSGETSGELDRMLERASTMQDREVTT 362
+ +AAE V +G ++ LE+ FPPMM+ M+ SGE SG+L ++ RA+ Q+
Sbjct 299 QRLANAAENVRQGNSIHLSLEQTAIFPPMMLYMVASGEKSGQLGTLMVRAADNQETLQQN 358
Query 363 FISTLLALLEPLMLVLMAAIVLVIVIAVMLPIVNMNNMI 401
I+ L++ EP +++ MA IVL IV++V+ P++ +N+MI
Sbjct 359 RIALTLSIFEPALIITMALIVLFIVVSVLQPLLQLNSMI 397
>Q5SK58 Type IV pilus assembly protein PilC [Thermus thermophilus
(strain ATCC 27634 / DSM 579 / HB8)]
Length=406
Score = 216 bits (549), Expect = 1e-69
Identities = 128/396 (32%), Positives = 210/396 (53%), Gaps = 2/396 (1%)
Query 1 MPAYQFTALDASGKQQKGVLEGDSARQIRQQLRDREWTPIAV-DPVEQKDKRQGNTWFQK 59
MP YQ+ A D G+ + +E + R + LRDR + +P + ++
Sbjct 1 MPVYQYKARDRQGRLVEATIEAEDLRTAARLLRDRGLFVAEIKEPGKGLQAEVRIPALER 60
Query 60 KVTAYDLALMTRQLSVLVAAAIPLEEALRAVAKQSEKAHVQNLLLSVRSKVLEGHSLAQG 119
DLA+ +RQL+ ++ A + L +AL + +Q+E + +L VR+ V G + ++
Sbjct 61 GPGLKDLAIFSRQLATMLGAGLTLLQALAILERQTENRKFREILKQVRTDVEGGMAFSEA 120
Query 120 MQQSGRFPDLYIATIAAGERSGHLDLILDQLADYTENRFAMQKKVQGAMIYPIILMLMSF 179
+ + F LY+ + AGE SG LDLILD+LA + E ++ K++ AM YP+I+ + +
Sbjct 121 LSKHKIFSRLYVNLVRAGETSGGLDLILDRLASFLEKELELRGKIRSAMTYPVIVFVFAV 180
Query 180 AIVMGLMTYVVPDIVKTFDQSKEALPWITVALMKASDFIRLAWPFLMSFGVIAIILFIRF 239
+ L+T +VP + LP +T L+ SD +R A L+ V + +
Sbjct 181 GVAYFLLTGIVPQFAQILTDLGSELPLLTRFLIAVSDLLRAATLPLLLLAVALFFAYRWY 240
Query 240 LRTHAGHYAFDRLTLRLPLFGKLSRGINSARFASTLSILTQSGVPLVDALRIGAAVSSNW 299
T G DRL LRLP+FG L+R ARF+ TL++L SGV +V+AL I + N
Sbjct 241 YGTPQGRRVIDRLKLRLPVFGNLNRKTAVARFSRTLALLLSSGVNIVEALDITKGTAGNS 300
Query 300 VIRDAINHAAEKVTEGGNLGTQLERCGY-FPPMMVQMIRSGETSGELDRMLERASTMQDR 358
V+ + + A K+ +G L L + + FPPM+ M+ GE +G LD ML + + +R
Sbjct 301 VVEEIVEAAKLKIQQGDPLNLTLAQHPFVFPPMVSSMVAIGEETGALDTMLSKVADFYER 360
Query 359 EVTTFISTLLALLEPLMLVLMAAIVLVIVIAVMLPI 394
EV +++L A +EPLM++ + IV +IV + LP+
Sbjct 361 EVDEAVASLTAAIEPLMIIFLGVIVGMIVAGMFLPL 396
>P45793 Type IV pilus assembly protein TapC [Aeromonas hydrophila]
Length=413
Score = 206 bits (524), Expect = 6e-66
Identities = 121/404 (30%), Positives = 223/404 (55%), Gaps = 12/404 (3%)
Query 3 AYQFTALDASGKQQKGVLEGDSARQIRQQLRDREWTPIAVDPVEQKDKRQGNTWFQK--- 59
A++++ ++ G++ G L+ DS ++ +LR + V+ + K QG F K
Sbjct 16 AFRWSGVNRKGQKVSGELQADSINTVKAELRKQ-----GVNVTKVSKKSQG--LFSKGGA 68
Query 60 KVTAYDLALMTRQLSVLVAAAIPLEEALRAVAKQSEKAHVQNLLLSVRSKVLEGHSLAQG 119
K+ D+A+++RQ++ +++A +PL ++L+ +A+ EKA ++ L+ + + V G +++
Sbjct 69 KIKPMDIAIVSRQITTMLSAGVPLVQSLQIIARSHEKASMRELMGQIAADVETGTPMSEA 128
Query 120 MQQSGR-FPDLYIATIAAGERSGHLDLILDQLADYTENRFAMQKKVQGAMIYPIILMLMS 178
+++ R F LY + AGE+SG L+ I D++A Y E A++ K++ AM YP +++L++
Sbjct 129 LRRHPRHFDALYCDLVEAGEQSGALETIYDRIATYREKSEALKSKIKKAMFYPAMVILVA 188
Query 179 FAIVMGLMTYVVPDIVKTFDQSKEALPWITVALMKASDFIRLAWPFLMSFGVIAIILFIR 238
+ L+ +V+P F LP T ++ S F++ W + AI L++R
Sbjct 189 IVVTSILLLFVIPQFEDIFKSFGAELPIFTQFVIGISRFMQHWWYVIFGGTAFAIFLYVR 248
Query 239 FLR-THAGHYAFDRLTLRLPLFGKLSRGINSARFASTLSILTQSGVPLVDALRIGAAVSS 297
R + D+ L +P+ G + ARFA TLS +G+PLVDAL A S
Sbjct 249 AWRASQKVKDNTDKFILTIPVVGMILHKAAMARFARTLSTTFSAGIPLVDALISAAGASG 308
Query 298 NWVIRDAINHAAEKVTEGGNLGTQLERCGYFPPMMVQMIRSGETSGELDRMLERASTMQD 357
N+V R A+ +V G + + FP M++QM+ GE SG +D ML + +T+ +
Sbjct 309 NYVYRTAVMAIRNEVVAGMQINVAMRTVDLFPDMVIQMVMIGEESGAIDDMLSKVATIFE 368
Query 358 REVTTFISTLLALLEPLMLVLMAAIVLVIVIAVMLPIVNMNNMI 401
+EV + L +LLEPL++V++ +V +V+A+ LPI + +++
Sbjct 369 QEVDDLVDGLTSLLEPLIMVVLGVLVGGMVVAMYLPIFKLGDLV 412
>Q1D0A0 Type IV pilus assembly protein PilC [Myxococcus xanthus
(strain DK1622)]
Length=417
Score = 198 bits (504), Expect = 6e-63
Identities = 123/402 (31%), Positives = 212/402 (53%), Gaps = 8/402 (2%)
Query 4 YQFTALDASGKQQKGVLEGDSARQIRQQLRDREWTPIAVDPVEQKDKRQGNTWFQK--KV 61
+ + A SG+ +KG +E + +L+ P+ V +K G+ V
Sbjct 19 FLWEAKTKSGESKKGEMEAMDVEAVNARLKSLGLNPVKV---RKKSMLDGDITIPGFGGV 75
Query 62 TAYDLALMTRQLSVLVAAAIPLEEALRAVAKQSEKAHVQNLLLSVRSKVLEGHSLAQGMQ 121
D+ + TRQ + ++ A +PL + L +A Q + + +L +++SKV +G + A ++
Sbjct 76 EGKDILVFTRQFATMIDAGLPLVQCLDILASQMDNPSFKKVLFAIKSKVEQGSTFADALK 135
Query 122 QSGR-FPDLYIATIAAGERSGHLDLILDQLADYTENRFAMQKKVQGAMIYPIILMLMSFA 180
+ + F +LY+ AAGE G LD IL++LA Y E ++ KV+ AM YPII++L++
Sbjct 136 EHPKVFDELYVQLCAAGEVGGILDAILNRLAAYREKNEKLKSKVKSAMTYPIIVILVAIG 195
Query 181 IVMGLMTYVVPDIVKTFDQSKEALPWITVALMKASDFIRLAWPFLMSFGVIAIIL-FIRF 239
+ L+ V P K F LP T ++ S + + F ++ ++A+++ F
Sbjct 196 VTAVLLLKVTPVFEKMFADFGSELPGPTQMIVNFSHMAQ-EYFFHVAGSIVAVVMSFTWS 254
Query 240 LRTHAGHYAFDRLTLRLPLFGKLSRGINSARFASTLSILTQSGVPLVDALRIGAAVSSNW 299
R G +D++ L +P+FG + R + ARF TL + SGVP++DAL + A + N
Sbjct 255 YRQPRGRKFWDKVFLFMPVFGPVLRKVAVARFTRTLGTMISSGVPILDALDVTAKTAGNR 314
Query 300 VIRDAINHAAEKVTEGGNLGTQLERCGYFPPMMVQMIRSGETSGELDRMLERASTMQDRE 359
+ DAI + K+ EG N+ L FP M+VQMI GE +G +D ML + + D E
Sbjct 315 TVEDAIIYVRGKIAEGKNIAGPLAETKVFPSMVVQMIGVGEATGAMDTMLNKIADFYDDE 374
Query 360 VTTFISTLLALLEPLMLVLMAAIVLVIVIAVMLPIVNMNNMI 401
V I++L A++EP+++V + +V +I + LPI ++ I
Sbjct 375 VDAAINSLTAMIEPVLMVFLGGVVGGFLIGMYLPIFSLAGAI 416
Lambda K H a alpha
0.326 0.137 0.392 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1262380
Database: 93f492216d19db6d54d8981e811c8833.SwissProt.fasta
Posted date: May 20, 2024 10:37 AM
Number of letters in database: 4,026
Number of sequences in database: 10
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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