BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: ce229abc9212b3b36b9a801990f6e97b.SwissProt.fasta
10 sequences; 1,475 total letters
Query= ACIAD0412
Length=169
Score E
Sequences producing significant alignments: (Bits) Value
Q00514 Type II secretion system core protein G [Pseudomonas aerug... 142 5e-48
P45773 Type II secretion system core protein G [Vibrio cholerae s... 127 3e-42
P31733 Type II secretion system core protein G [Aeromonas hydroph... 119 4e-39
P15746 Type II secretion system core protein G [Klebsiella pneumo... 113 2e-36
P41442 Type II secretion system core protein G [Escherichia coli ... 108 1e-34
P31585 Type II secretion system core protein G [Dickeya chrysanth... 105 3e-33
P31586 Type II secretion system core protein G [Pectobacterium ca... 105 3e-33
A0A0H3HDD6 Type II secretion system core protein G [Klebsiella mi... 102 4e-32
P31734 Type II secretion system core protein G [Xanthomonas campe... 97.1 3e-30
P02974 Type IV major pilin protein PilE1 [Neisseria gonorrhoeae] 49.7 6e-12
>Q00514 Type II secretion system core protein G [Pseudomonas aeruginosa
(strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM
14847 / LMG 12228 / 1C / PRS 101 / PAO1)]
Length=142
Score = 142 bits (358), Expect = 5e-48
Identities = 77/137 (56%), Positives = 96/137 (70%), Gaps = 6/137 (4%)
Query 30 KRVSGFTLIEVMVVIVILGVLAALIVPNVMGRGEKAKVDTTQITLKGVAGALDQYKLDNG 89
++ SGFTLIE+MVV+VILG+LAAL+VP VM R ++AKV + +K +A ALD YKLDN
Sbjct 4 RQQSGFTLIEIMVVVVILGILAALVVPQVMSRPDQAKVTVAKGDIKAIAAALDMYKLDNF 63
Query 90 HFPTMQEGGLDALVNQPA---TAKNWLPGGYVKGGYPKDSWENDIQYVIPGTEGRAFDLY 146
+P+ Q+ GL+ALV +P KNW GY+K P D W N QY+ PGT+G FDLY
Sbjct 64 AYPSTQQ-GLEALVKKPTGNPQPKNWNKDGYLK-KLPVDPWGNPYQYLAPGTKG-PFDLY 120
Query 147 SFGADGKAGGEGNDADI 163
S GADGK GG NDADI
Sbjct 121 SLGADGKEGGSDNDADI 137
>P45773 Type II secretion system core protein G [Vibrio cholerae
serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)]
Length=146
Score = 127 bits (320), Expect = 3e-42
Identities = 67/140 (48%), Positives = 93/140 (66%), Gaps = 5/140 (4%)
Query 26 MIRPKRVSGFTLIEVMVVIVILGVLAALIVPNVMGRGEKAKVDTTQITLKGVAGALDQYK 85
M + ++ +GFTL+EVMVV+VILG+LA+ +VPN++G EKA + + ALD YK
Sbjct 1 MKKMRKQTGFTLLEVMVVVVILGILASFVVPNLLGNKEKADQQKAVTDIVALENALDMYK 60
Query 86 LDNGHFPTMQEGGLDALVNQPAT--AKNWLPGGYVKGGYPKDSWENDIQYVIPGTEGRAF 143
LDN +PT + GL+ALV +P +N+ GGY+K PKD W ND QY+ PG +G
Sbjct 61 LDNSVYPTTDQ-GLEALVTKPTNPEPRNYREGGYIK-RLPKDPWGNDYQYLSPGDKG-TI 117
Query 144 DLYSFGADGKAGGEGNDADI 163
D+++ GADG+ GGEG ADI
Sbjct 118 DVFTLGADGQEGGEGTGADI 137
>P31733 Type II secretion system core protein G [Aeromonas hydrophila]
Length=143
Score = 119 bits (299), Expect = 4e-39
Identities = 65/132 (49%), Positives = 89/132 (67%), Gaps = 6/132 (5%)
Query 27 IRPKRVSGFTLIEVMVVIVILGVLAALIVPNVMGRGEKAKVDTTQITLKGVAGALDQYKL 86
++ +R SGFTL+EVMVVIVILG+LA+L+VPN+MG EKA + + ALD YKL
Sbjct 1 MQKRRQSGFTLLEVMVVIVILGILASLVVPNLMGNKEKADQQKAVSDIVALENALDMYKL 60
Query 87 DNGHFPTMQEGGLDALVNQPATA---KNWLPGGYVKGGYPKDSWENDIQYVIPGTEGRAF 143
DN +PT ++ GLDALVN+P A +++ GGY+K P+D W N Q + PG G+
Sbjct 61 DNNRYPTTEQ-GLDALVNKPTAAPEPRSYRDGGYIK-RLPQDPWGNPYQMLSPGQFGK-I 117
Query 144 DLYSFGADGKAG 155
D++S G DG+AG
Sbjct 118 DIFSMGLDGEAG 129
>P15746 Type II secretion system core protein G [Klebsiella pneumoniae]
Length=140
Score = 113 bits (282), Expect = 2e-36
Identities = 65/134 (49%), Positives = 87/134 (65%), Gaps = 8/134 (6%)
Query 30 KRVSGFTLIEVMVVIVILGVLAALIVPNVMGRGEKAKVDTTQITLKGVAGALDQYKLDNG 89
+R GFTL+E+MVVIVILGVLA+L+VPN+MG EKA L + GALD YKLDN
Sbjct 2 QRQRGFTLLEIMVVIVILGVLASLVVPNLMGNKEKADRQKVVSDLVALEGALDMYKLDNS 61
Query 90 HFPTMQEGGLDALVNQPAT---AKNWLPGGYVKGGYPKDSWENDIQYVIPGTEGRAFDLY 146
+PT ++ GL ALV+ P+ A+N+ GGY++ P+D W +D Q + PG G+ D++
Sbjct 62 RYPTTEQ-GLQALVSAPSAEPHARNYPEGGYIR-RLPQDPWGSDYQLLSPGQHGQV-DIF 118
Query 147 SFGADGKAGGEGND 160
S G DG E ND
Sbjct 119 SLGPDGVP--ESND 130
>P41442 Type II secretion system core protein G [Escherichia coli
(strain K12)]
Length=145
Score = 108 bits (270), Expect = 1e-34
Identities = 63/127 (50%), Positives = 79/127 (62%), Gaps = 6/127 (5%)
Query 34 GFTLIEVMVVIVILGVLAALIVPNVMGRGEKAKVDTTQITLKGVAGALDQYKLDNGHFPT 93
GFTL+E+MVVIVI+GVLA+L+VPN+MG EKA + + ALD YKLDN H+PT
Sbjct 9 GFTLLEIMVVIVIIGVLASLVVPNLMGNKEKADKQKAVSDIVALENALDMYKLDNHHYPT 68
Query 94 MQEGGLDALVNQPA---TAKNWLPGGYVKGGYPKDSWENDIQYVIPGTEGRAFDLYSFGA 150
+ GL++LV P A N+ GY+K P D W ND V PG G A+DL S G
Sbjct 69 TNQ-GLESLVEAPTLPPLAANYNKEGYIK-RLPADPWGNDYVLVNPGEHG-AYDLLSAGP 125
Query 151 DGKAGGE 157
DG+ G E
Sbjct 126 DGEMGTE 132
>P31585 Type II secretion system core protein G [Dickeya chrysanthemi]
Length=153
Score = 105 bits (261), Expect = 3e-33
Identities = 58/126 (46%), Positives = 80/126 (63%), Gaps = 6/126 (5%)
Query 30 KRVSGFTLIEVMVVIVILGVLAALIVPNVMGRGEKAKVDTTQITLKGVAGALDQYKLDNG 89
+R GFTL+E+MVVIVILGVLA+L+VPN+MG EKA + + LD YKLDN
Sbjct 3 RRQRGFTLLEIMVVIVILGVLASLVVPNLMGNKEKADKQKAVSDIVALESQLDMYKLDNS 62
Query 90 HFPTMQEGGLDALVNQPAT---AKNWLPGGYVKGGYPKDSWENDIQYVIPGTEGRAFDLY 146
+PT ++ GL ALV +P T +N+ GY++ P+D W + Q V PG G+ D++
Sbjct 63 RYPTTEQ-GLGALVKKPTTPPEPRNYPQDGYIR-RLPQDPWGAEYQLVSPGRHGK-IDVF 119
Query 147 SFGADG 152
S+G DG
Sbjct 120 SYGPDG 125
>P31586 Type II secretion system core protein G [Pectobacterium
carotovorum subsp. carotovorum]
Length=156
Score = 105 bits (261), Expect = 3e-33
Identities = 59/130 (45%), Positives = 80/130 (62%), Gaps = 6/130 (5%)
Query 31 RVSGFTLIEVMVVIVILGVLAALIVPNVMGRGEKAKVDTTQITLKGVAGALDQYKLDNGH 90
R GFTL+E+MVVIVILGVLA+L+VPN+MG EKA + + ALD YKLDN
Sbjct 19 RQRGFTLLEIMVVIVILGVLASLVVPNLMGNKEKADRQKAVSDIVSLESALDMYKLDNNR 78
Query 91 FPTMQEGGLDALVNQPAT---AKNWLPGGYVKGGYPKDSWENDIQYVIPGTEGRAFDLYS 147
+P+ ++ GL ALV +P +N+ GY++ P+D W D Q + PG G+ D++S
Sbjct 79 YPSTEQ-GLKALVTKPTVQPEPRNYPADGYIR-RLPQDPWGTDYQLLNPGQHGK-LDIFS 135
Query 148 FGADGKAGGE 157
G DG G E
Sbjct 136 LGPDGMPGTE 145
>A0A0H3HDD6 Type II secretion system core protein G [Klebsiella
michiganensis (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC
3318 / NRRL B-199 / KCTC 1686 / BUCSAV 143 / CCM 1901)]
Length=142
Score = 102 bits (253), Expect = 4e-32
Identities = 56/132 (42%), Positives = 82/132 (62%), Gaps = 6/132 (5%)
Query 27 IRPKRVSGFTLIEVMVVIVILGVLAALIVPNVMGRGEKAKVDTTQITLKGVAGALDQYKL 86
+R + GFTL+E+MVVIVI+G+LA+L+VPN+MG +KA + + ALD YKL
Sbjct 1 MRRQSQRGFTLLEIMVVIVIMGILASLVVPNLMGNKDKADRQKVVSDIVALESALDMYKL 60
Query 87 DNGHFPTMQEGGLDALVNQPAT---AKNWLPGGYVKGGYPKDSWENDIQYVIPGTEGRAF 143
DN +PT ++ GL AL+ +P+ A+ + GY++ P+D W D Q V PG G+
Sbjct 61 DNSRYPTTEQ-GLQALITKPSVPPEARYYPQDGYIR-RLPQDPWGGDYQLVSPGQHGQ-I 117
Query 144 DLYSFGADGKAG 155
D++S G DG G
Sbjct 118 DIFSSGQDGVPG 129
>P31734 Type II secretion system core protein G [Xanthomonas campestris
pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB
528 / LMG 568 / P 25)]
Length=143
Score = 97.1 bits (240), Expect = 3e-30
Identities = 49/133 (37%), Positives = 80/133 (60%), Gaps = 6/133 (5%)
Query 33 SGFTLIEVMVVIVILGVLAALIVPNVMGRGEKAKVDTTQITLKGVAGALDQYKLDNGHFP 92
+G +L+E+++VIV++G + L+ V+G ++ K + + ++ +AG ++ ++LD G P
Sbjct 16 AGMSLLEIIIVIVLIGAVLTLVGSRVLGGADRGKANLAKSQIQTLAGKIENFQLDTGKLP 75
Query 93 TMQEGGLDALVNQPATAKNWLPGGYVKGGYPKDSWENDIQYVIPGTEGRAFDLYSFGADG 152
+ LD LV QP + WL G Y K D W + I+Y +PG +G+AFDL S G DG
Sbjct 76 SK----LDDLVTQPGGSSGWL-GPYAKPVELNDPWGHTIEYRVPG-DGQAFDLISLGKDG 129
Query 153 KAGGEGNDADIYY 165
+ GG D+DI Y
Sbjct 130 RPGGSSYDSDIKY 142
>P02974 Type IV major pilin protein PilE1 [Neisseria gonorrhoeae]
Length=165
Score = 49.7 bits (117), Expect = 6e-12
Identities = 31/86 (36%), Positives = 48/86 (56%), Gaps = 6/86 (7%)
Query 34 GFTLIEVMVVIVILGVLAALIVPNVMGRGEKAKVDTTQITLKGVAGALDQYKLDNGHFPT 93
GFTLIE+M+VI I+G+LAA+ +P +A+V + +G A+ +Y L++G +P
Sbjct 7 GFTLIELMIVIAIVGILAAVALPAYQDYTARAQVSEAILLAEGQKSAVTEYYLNHGKWP- 65
Query 94 MQEGGLDALVNQPATAKNWLPGGYVK 119
E A V P + + G YVK
Sbjct 66 --ENNTSAGVASPPSD---IKGKYVK 86
Lambda K H a alpha
0.320 0.140 0.417 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 158235
Database: ce229abc9212b3b36b9a801990f6e97b.SwissProt.fasta
Posted date: Jun 1, 2024 2:23 PM
Number of letters in database: 1,475
Number of sequences in database: 10
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
