BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 163b0ccd3626dc189bc9a44c9e90b538.TrEMBL.fasta
27 sequences; 8,140 total letters
Query= ACIAD0442
Length=311
Score E
Sequences producing significant alignments: (Bits) Value
A0A7G2SCM5 Pseudouridine synthase [Acinetobacter sp] 609 0.0
Q6FEX8 Pseudouridine synthase [Acinetobacter baylyi (strain ATCC ... 609 0.0
A0A1P8EM25 Pseudouridine synthase [Acinetobacter soli] 585 0.0
A0A3R9BV14 Pseudouridine synthase [Acinetobacter soli] 583 0.0
N9BYG6 Pseudouridine synthase [Acinetobacter soli NIPH 2899] 582 0.0
A0A0M1I1C7 Pseudouridine synthase [Acinetobacter sp. C15] 582 0.0
N9C5Q8 Pseudouridine synthase [Acinetobacter ursingii ANC 3649] 577 0.0
A0A427PR94 Pseudouridine synthase [Acinetobacter sp. FDAARGOS_515] 576 0.0
A0A3F3L408 Pseudouridine synthase [Acinetobacter ursingii] 576 0.0
A0A009ZH81 Pseudouridine synthase [Acinetobacter sp. 479375] 575 0.0
A0A7T9Z6P3 Pseudouridine synthase [Acinetobacter ursingii] 575 0.0
A0A3A8ELU5 Pseudouridine synthase [Acinetobacter guerrae] 572 0.0
N9FNN2 Pseudouridine synthase [Acinetobacter beijerinckii CIP 110... 563 0.0
D0SPS1 Pseudouridine synthase [Acinetobacter junii SH205] 562 0.0
S7WV91 Pseudouridine synthase [Acinetobacter junii CIP 107470 = M... 562 0.0
A0A3C0RI62 Pseudouridine synthase [Acinetobacter junii] 562 0.0
D4AH69 Pseudouridine synthase [Bifidobacterium bifidum] 147 3e-45
Q6GUL5 Pseudouridine synthase [Prevotella nigrescens] 138 2e-41
Q9F461 Pseudouridine synthase [Nostoc sp. (strain PCC 7120 / SAG ... 135 7e-41
Q7X4J9 Pseudouridine synthase [Streptococcus suis] 133 4e-40
Q9KHC3 Pseudouridine synthase [secondary endosymbiont of Glycaspi... 117 7e-34
A0A7U3RVT0 Pseudouridine synthase [Wolbachia endosymbiont of Anop... 112 4e-32
Q7Z110 Ribosomal large subunit pseudouridine synthase C [Parameci... 112 1e-31
Q9FAT9 Pseudouridine synthase [Rhizobium meliloti] 104 2e-29
A0A8B6X1F8 Pseudouridine synthase [Derxia gummosa DSM 723] 91.3 1e-24
A0A7U3RUG2 Pseudouridine synthase [Wolbachia endosymbiont of Anop... 88.2 5e-24
A0A7U3NFZ1 Pseudouridine synthase [Wolbachia endosymbiont of Anop... 88.2 5e-24
>A0A7G2SCM5 Pseudouridine synthase [Acinetobacter sp]
Length=310
Score = 609 bits (1570), Expect = 0.0
Identities = 310/310 (100%), Positives = 310/310 (100%), Gaps = 0/310 (0%)
Query 1 MNSTQQWQSVTWFEVDEHQAGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAES 60
MNSTQQWQSVTWFEVDEHQAGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAES
Sbjct 1 MNSTQQWQSVTWFEVDEHQAGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAES 60
Query 61 KLSIGDQIRVAPIRYEQKDESDAPVSDQVAKSLLNRVVYEDEGLLVVNKPSGIAVHGGSG 120
KLSIGDQIRVAPIRYEQKDESDAPVSDQVAKSLLNRVVYEDEGLLVVNKPSGIAVHGGSG
Sbjct 61 KLSIGDQIRVAPIRYEQKDESDAPVSDQVAKSLLNRVVYEDEGLLVVNKPSGIAVHGGSG 120
Query 121 VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIRKTYAAL 180
VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIRKTYAAL
Sbjct 121 VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIRKTYAAL 180
Query 181 VKGQVSLDQQLIDAPLLRYELSNGERRVRVSKEGKPSKTEWRVAERFKEATLVYASPLSG 240
VKGQVSLDQQLIDAPLLRYELSNGERRVRVSKEGKPSKTEWRVAERFKEATLVYASPLSG
Sbjct 181 VKGQVSLDQQLIDAPLLRYELSNGERRVRVSKEGKPSKTEWRVAERFKEATLVYASPLSG 240
Query 241 RTHQIRVHGLSIGHPLVGDDKYGHQTVYSGPEARRLCLHAMRLEIPGYPVIEAPLAEDIQ 300
RTHQIRVHGLSIGHPLVGDDKYGHQTVYSGPEARRLCLHAMRLEIPGYPVIEAPLAEDIQ
Sbjct 241 RTHQIRVHGLSIGHPLVGDDKYGHQTVYSGPEARRLCLHAMRLEIPGYPVIEAPLAEDIQ 300
Query 301 SVVAQLRARK 310
SVVAQLRARK
Sbjct 301 SVVAQLRARK 310
>Q6FEX8 Pseudouridine synthase [Acinetobacter baylyi (strain ATCC
33305 / BD413 / ADP1)]
Length=310
Score = 609 bits (1570), Expect = 0.0
Identities = 310/310 (100%), Positives = 310/310 (100%), Gaps = 0/310 (0%)
Query 1 MNSTQQWQSVTWFEVDEHQAGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAES 60
MNSTQQWQSVTWFEVDEHQAGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAES
Sbjct 1 MNSTQQWQSVTWFEVDEHQAGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAES 60
Query 61 KLSIGDQIRVAPIRYEQKDESDAPVSDQVAKSLLNRVVYEDEGLLVVNKPSGIAVHGGSG 120
KLSIGDQIRVAPIRYEQKDESDAPVSDQVAKSLLNRVVYEDEGLLVVNKPSGIAVHGGSG
Sbjct 61 KLSIGDQIRVAPIRYEQKDESDAPVSDQVAKSLLNRVVYEDEGLLVVNKPSGIAVHGGSG 120
Query 121 VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIRKTYAAL 180
VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIRKTYAAL
Sbjct 121 VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIRKTYAAL 180
Query 181 VKGQVSLDQQLIDAPLLRYELSNGERRVRVSKEGKPSKTEWRVAERFKEATLVYASPLSG 240
VKGQVSLDQQLIDAPLLRYELSNGERRVRVSKEGKPSKTEWRVAERFKEATLVYASPLSG
Sbjct 181 VKGQVSLDQQLIDAPLLRYELSNGERRVRVSKEGKPSKTEWRVAERFKEATLVYASPLSG 240
Query 241 RTHQIRVHGLSIGHPLVGDDKYGHQTVYSGPEARRLCLHAMRLEIPGYPVIEAPLAEDIQ 300
RTHQIRVHGLSIGHPLVGDDKYGHQTVYSGPEARRLCLHAMRLEIPGYPVIEAPLAEDIQ
Sbjct 241 RTHQIRVHGLSIGHPLVGDDKYGHQTVYSGPEARRLCLHAMRLEIPGYPVIEAPLAEDIQ 300
Query 301 SVVAQLRARK 310
SVVAQLRARK
Sbjct 301 SVVAQLRARK 310
>A0A1P8EM25 Pseudouridine synthase [Acinetobacter soli]
Length=310
Score = 585 bits (1507), Expect = 0.0
Identities = 297/310 (96%), Positives = 303/310 (98%), Gaps = 0/310 (0%)
Query 1 MNSTQQWQSVTWFEVDEHQAGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAES 60
MNSTQQWQSVTWFEVDEHQAGQRIDNFLF+RLKGVPKSRIYRLIREGQVRVNKKRIKAES
Sbjct 1 MNSTQQWQSVTWFEVDEHQAGQRIDNFLFSRLKGVPKSRIYRLIREGQVRVNKKRIKAES 60
Query 61 KLSIGDQIRVAPIRYEQKDESDAPVSDQVAKSLLNRVVYEDEGLLVVNKPSGIAVHGGSG 120
KLSIGDQIRVAPIRYEQKDESDAPVSDQVAKSLLNRVVYED+GLLVVNKPSGIAVHGGSG
Sbjct 61 KLSIGDQIRVAPIRYEQKDESDAPVSDQVAKSLLNRVVYEDDGLLVVNKPSGIAVHGGSG 120
Query 121 VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIRKTYAAL 180
VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKI KTYAAL
Sbjct 121 VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIAKTYAAL 180
Query 181 VKGQVSLDQQLIDAPLLRYELSNGERRVRVSKEGKPSKTEWRVAERFKEATLVYASPLSG 240
VKG VSLD+QLIDAPLLRYEL+NGERRVRVSKEGKPSKT W VAERFK+ATLVYASPLSG
Sbjct 181 VKGNVSLDRQLIDAPLLRYELANGERRVRVSKEGKPSKTNWVVAERFKDATLVYASPLSG 240
Query 241 RTHQIRVHGLSIGHPLVGDDKYGHQTVYSGPEARRLCLHAMRLEIPGYPVIEAPLAEDIQ 300
RTHQIRVHGLSIGHPLVGDDKYGHQT Y+GPEARRLCLHAMRLEIPGYPVIEA L EDIQ
Sbjct 241 RTHQIRVHGLSIGHPLVGDDKYGHQTPYTGPEARRLCLHAMRLEIPGYPVIEAALPEDIQ 300
Query 301 SVVAQLRARK 310
SVVAQLRARK
Sbjct 301 SVVAQLRARK 310
>A0A3R9BV14 Pseudouridine synthase [Acinetobacter soli]
Length=310
Score = 583 bits (1502), Expect = 0.0
Identities = 296/310 (95%), Positives = 303/310 (98%), Gaps = 0/310 (0%)
Query 1 MNSTQQWQSVTWFEVDEHQAGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAES 60
MNSTQQWQSVTWFEVDEHQAGQRIDNFLF+RLKGVPKSRIYRLIREGQVRVNKKRIKAES
Sbjct 1 MNSTQQWQSVTWFEVDEHQAGQRIDNFLFSRLKGVPKSRIYRLIREGQVRVNKKRIKAES 60
Query 61 KLSIGDQIRVAPIRYEQKDESDAPVSDQVAKSLLNRVVYEDEGLLVVNKPSGIAVHGGSG 120
KLSIGDQIRVAPIRYEQKDESDAPVSDQVAKSLL+RVVYED+GLLVVNKPSGIAVHGGSG
Sbjct 61 KLSIGDQIRVAPIRYEQKDESDAPVSDQVAKSLLSRVVYEDDGLLVVNKPSGIAVHGGSG 120
Query 121 VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIRKTYAAL 180
VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKI KTYAAL
Sbjct 121 VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIAKTYAAL 180
Query 181 VKGQVSLDQQLIDAPLLRYELSNGERRVRVSKEGKPSKTEWRVAERFKEATLVYASPLSG 240
VKG VSLD+QLIDAPLLRYEL+NGERRVRVSKEGKPSKT W VAERFK+ATLVYASPLSG
Sbjct 181 VKGNVSLDRQLIDAPLLRYELANGERRVRVSKEGKPSKTNWVVAERFKDATLVYASPLSG 240
Query 241 RTHQIRVHGLSIGHPLVGDDKYGHQTVYSGPEARRLCLHAMRLEIPGYPVIEAPLAEDIQ 300
RTHQIRVHGLSIGHPLVGDDKYGHQT Y+GPEARRLCLHAMRLEIPGYPVIEA L EDIQ
Sbjct 241 RTHQIRVHGLSIGHPLVGDDKYGHQTPYTGPEARRLCLHAMRLEIPGYPVIEAALPEDIQ 300
Query 301 SVVAQLRARK 310
SVVAQLRARK
Sbjct 301 SVVAQLRARK 310
>N9BYG6 Pseudouridine synthase [Acinetobacter soli NIPH 2899]
Length=310
Score = 582 bits (1499), Expect = 0.0
Identities = 295/310 (95%), Positives = 303/310 (98%), Gaps = 0/310 (0%)
Query 1 MNSTQQWQSVTWFEVDEHQAGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAES 60
MNSTQQWQSVTWFEVDEHQAGQRIDNFLF+RLKGVPKSRIYRLIREGQVRVNKKRIKAES
Sbjct 1 MNSTQQWQSVTWFEVDEHQAGQRIDNFLFSRLKGVPKSRIYRLIREGQVRVNKKRIKAES 60
Query 61 KLSIGDQIRVAPIRYEQKDESDAPVSDQVAKSLLNRVVYEDEGLLVVNKPSGIAVHGGSG 120
KLSIGDQIRVAPIRYEQKDESDAPVSDQVAKSLL+RVVYED+GLLVVNKPSGIAVHGGSG
Sbjct 61 KLSIGDQIRVAPIRYEQKDESDAPVSDQVAKSLLSRVVYEDDGLLVVNKPSGIAVHGGSG 120
Query 121 VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIRKTYAAL 180
VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKI KTYAAL
Sbjct 121 VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIAKTYAAL 180
Query 181 VKGQVSLDQQLIDAPLLRYELSNGERRVRVSKEGKPSKTEWRVAERFKEATLVYASPLSG 240
VKG VSLD+QLIDAPLLRYEL+NGERRVRVSKEGKPSKT W VAERFK+ATLVYASPLSG
Sbjct 181 VKGNVSLDRQLIDAPLLRYELANGERRVRVSKEGKPSKTNWVVAERFKDATLVYASPLSG 240
Query 241 RTHQIRVHGLSIGHPLVGDDKYGHQTVYSGPEARRLCLHAMRLEIPGYPVIEAPLAEDIQ 300
RTHQIRVHGLSIGHPLVGDDKYGHQT Y+GPEARRLCLHAMRLEIPGYPVIEA L EDIQ
Sbjct 241 RTHQIRVHGLSIGHPLVGDDKYGHQTPYTGPEARRLCLHAMRLEIPGYPVIEAALPEDIQ 300
Query 301 SVVAQLRARK 310
+VVAQLRARK
Sbjct 301 NVVAQLRARK 310
>A0A0M1I1C7 Pseudouridine synthase [Acinetobacter sp. C15]
Length=310
Score = 582 bits (1499), Expect = 0.0
Identities = 295/310 (95%), Positives = 303/310 (98%), Gaps = 0/310 (0%)
Query 1 MNSTQQWQSVTWFEVDEHQAGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAES 60
MNSTQQWQSVTWFEVDEHQAGQRIDNFLF+RLKGVPKSRIYRLIREGQVRVNKKRIKAES
Sbjct 1 MNSTQQWQSVTWFEVDEHQAGQRIDNFLFSRLKGVPKSRIYRLIREGQVRVNKKRIKAES 60
Query 61 KLSIGDQIRVAPIRYEQKDESDAPVSDQVAKSLLNRVVYEDEGLLVVNKPSGIAVHGGSG 120
KLSIGDQIRVAPIRYEQKDESDAPVSDQVAKSLL+RVVYED+GLLVVNKPSGIAVHGGSG
Sbjct 61 KLSIGDQIRVAPIRYEQKDESDAPVSDQVAKSLLSRVVYEDDGLLVVNKPSGIAVHGGSG 120
Query 121 VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIRKTYAAL 180
VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKI KTYAAL
Sbjct 121 VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIAKTYAAL 180
Query 181 VKGQVSLDQQLIDAPLLRYELSNGERRVRVSKEGKPSKTEWRVAERFKEATLVYASPLSG 240
VKG VSLD+QLIDAPLLRYEL+NGERRVRVSKEGKPSKT W VAERFK+ATLVYASPLSG
Sbjct 181 VKGNVSLDRQLIDAPLLRYELANGERRVRVSKEGKPSKTNWVVAERFKDATLVYASPLSG 240
Query 241 RTHQIRVHGLSIGHPLVGDDKYGHQTVYSGPEARRLCLHAMRLEIPGYPVIEAPLAEDIQ 300
RTHQIRVHGLSIGHPLVGDDKYGHQT Y+GPEARRLCLHAMRLEIPGYPVIEA L EDIQ
Sbjct 241 RTHQIRVHGLSIGHPLVGDDKYGHQTPYTGPEARRLCLHAMRLEIPGYPVIEAALPEDIQ 300
Query 301 SVVAQLRARK 310
+VVAQLRARK
Sbjct 301 NVVAQLRARK 310
>N9C5Q8 Pseudouridine synthase [Acinetobacter ursingii ANC 3649]
Length=310
Score = 577 bits (1488), Expect = 0.0
Identities = 292/310 (94%), Positives = 303/310 (98%), Gaps = 0/310 (0%)
Query 1 MNSTQQWQSVTWFEVDEHQAGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAES 60
MNSTQQWQSVTWF+VDEHQAGQRIDNFLF+RLKGVPKSRIYRLIREGQVRVNKKRIKAES
Sbjct 1 MNSTQQWQSVTWFDVDEHQAGQRIDNFLFSRLKGVPKSRIYRLIREGQVRVNKKRIKAES 60
Query 61 KLSIGDQIRVAPIRYEQKDESDAPVSDQVAKSLLNRVVYEDEGLLVVNKPSGIAVHGGSG 120
KL+IGDQIRVAPIRYE KDE+ APVSDQVA+SLL RVVYEDEGLLVVNKP+GIAVHGGSG
Sbjct 61 KLNIGDQIRVAPIRYEPKDETAAPVSDQVAQSLLKRVVYEDEGLLVVNKPAGIAVHGGSG 120
Query 121 VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIRKTYAAL 180
VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLK LQDLLREHKIRKTYAAL
Sbjct 121 VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKHLQDLLREHKIRKTYAAL 180
Query 181 VKGQVSLDQQLIDAPLLRYELSNGERRVRVSKEGKPSKTEWRVAERFKEATLVYASPLSG 240
VKGQVSLD+QLIDAPLLRYEL+NGERRVRVSKEGKPSKTEW +AERFKEATLVYASPLSG
Sbjct 181 VKGQVSLDKQLIDAPLLRYELTNGERRVRVSKEGKPSKTEWVIAERFKEATLVYASPLSG 240
Query 241 RTHQIRVHGLSIGHPLVGDDKYGHQTVYSGPEARRLCLHAMRLEIPGYPVIEAPLAEDIQ 300
RTHQIRVHGLSIGHPLVGDDKYGHQTVY+GPEARRLCLHAMRLEIP YPVIEAPL EDIQ
Sbjct 241 RTHQIRVHGLSIGHPLVGDDKYGHQTVYTGPEARRLCLHAMRLEIPDYPVIEAPLPEDIQ 300
Query 301 SVVAQLRARK 310
SVVAQLRA+K
Sbjct 301 SVVAQLRAQK 310
>A0A427PR94 Pseudouridine synthase [Acinetobacter sp. FDAARGOS_515]
Length=310
Score = 576 bits (1484), Expect = 0.0
Identities = 290/310 (94%), Positives = 303/310 (98%), Gaps = 0/310 (0%)
Query 1 MNSTQQWQSVTWFEVDEHQAGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAES 60
MNSTQQWQSVTWF+VDEHQAGQRIDNFLF+RLKGVPKSRIYRLIREGQVRVNKKRIKAES
Sbjct 1 MNSTQQWQSVTWFDVDEHQAGQRIDNFLFSRLKGVPKSRIYRLIREGQVRVNKKRIKAES 60
Query 61 KLSIGDQIRVAPIRYEQKDESDAPVSDQVAKSLLNRVVYEDEGLLVVNKPSGIAVHGGSG 120
KL+IGDQIRVAPIRYE KDE+ APVSDQVA+SLL RVVYEDEGLLVVNKP+GIAVHGGSG
Sbjct 61 KLNIGDQIRVAPIRYEPKDETAAPVSDQVAQSLLKRVVYEDEGLLVVNKPAGIAVHGGSG 120
Query 121 VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIRKTYAAL 180
VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLK LQDLLREHKIRKTYAAL
Sbjct 121 VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKHLQDLLREHKIRKTYAAL 180
Query 181 VKGQVSLDQQLIDAPLLRYELSNGERRVRVSKEGKPSKTEWRVAERFKEATLVYASPLSG 240
VKGQVSLD+QLIDAPLLRYEL+NGERRVRV+KEGKPSKTEW +AERFKEATLVYASPLSG
Sbjct 181 VKGQVSLDRQLIDAPLLRYELANGERRVRVTKEGKPSKTEWVIAERFKEATLVYASPLSG 240
Query 241 RTHQIRVHGLSIGHPLVGDDKYGHQTVYSGPEARRLCLHAMRLEIPGYPVIEAPLAEDIQ 300
RTHQIRVHGLSIGHPLVGDDKYGHQT+Y+GPEARRLCLHAMRLEIP YPVIEAPL EDIQ
Sbjct 241 RTHQIRVHGLSIGHPLVGDDKYGHQTIYTGPEARRLCLHAMRLEIPDYPVIEAPLPEDIQ 300
Query 301 SVVAQLRARK 310
SVVAQLRA+K
Sbjct 301 SVVAQLRAQK 310
>A0A3F3L408 Pseudouridine synthase [Acinetobacter ursingii]
Length=310
Score = 576 bits (1484), Expect = 0.0
Identities = 290/310 (94%), Positives = 303/310 (98%), Gaps = 0/310 (0%)
Query 1 MNSTQQWQSVTWFEVDEHQAGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAES 60
MNSTQQWQSVTWF+VDEHQAGQRIDNFLF+RLKGVPKSRIYRLIREGQVRVNKKRIKAES
Sbjct 1 MNSTQQWQSVTWFDVDEHQAGQRIDNFLFSRLKGVPKSRIYRLIREGQVRVNKKRIKAES 60
Query 61 KLSIGDQIRVAPIRYEQKDESDAPVSDQVAKSLLNRVVYEDEGLLVVNKPSGIAVHGGSG 120
KL+IGDQIRVAPIRYE KDE+ APVSDQVA+SLL RVVYEDEGLLVVNKP+GIAVHGGSG
Sbjct 61 KLNIGDQIRVAPIRYEPKDETAAPVSDQVAQSLLKRVVYEDEGLLVVNKPAGIAVHGGSG 120
Query 121 VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIRKTYAAL 180
VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLK LQDLLREHKIRKTYAAL
Sbjct 121 VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKHLQDLLREHKIRKTYAAL 180
Query 181 VKGQVSLDQQLIDAPLLRYELSNGERRVRVSKEGKPSKTEWRVAERFKEATLVYASPLSG 240
VKGQVSLD+QLIDAPLLRYEL+NGERRVRV+KEGKPSKTEW +AERFKEATLVYASPLSG
Sbjct 181 VKGQVSLDKQLIDAPLLRYELANGERRVRVTKEGKPSKTEWVIAERFKEATLVYASPLSG 240
Query 241 RTHQIRVHGLSIGHPLVGDDKYGHQTVYSGPEARRLCLHAMRLEIPGYPVIEAPLAEDIQ 300
RTHQIRVHGLSIGHPLVGDDKYGHQT+Y+GPEARRLCLHAMRLEIP YPVIEAPL EDIQ
Sbjct 241 RTHQIRVHGLSIGHPLVGDDKYGHQTIYTGPEARRLCLHAMRLEIPDYPVIEAPLPEDIQ 300
Query 301 SVVAQLRARK 310
SVVAQLRA+K
Sbjct 301 SVVAQLRAQK 310
>A0A009ZH81 Pseudouridine synthase [Acinetobacter sp. 479375]
Length=310
Score = 575 bits (1481), Expect = 0.0
Identities = 291/310 (94%), Positives = 302/310 (97%), Gaps = 0/310 (0%)
Query 1 MNSTQQWQSVTWFEVDEHQAGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAES 60
MNSTQQWQSVTWF+VDEHQAGQRIDNFLF+RLKGVPKSRIYRLIREGQVRVNKKRIKAES
Sbjct 1 MNSTQQWQSVTWFDVDEHQAGQRIDNFLFSRLKGVPKSRIYRLIREGQVRVNKKRIKAES 60
Query 61 KLSIGDQIRVAPIRYEQKDESDAPVSDQVAKSLLNRVVYEDEGLLVVNKPSGIAVHGGSG 120
KL+IGDQIRVAPIRYE KDE+ APVSDQVA+SLL RVVYEDEGLLVVNKP+GIAVHGGSG
Sbjct 61 KLNIGDQIRVAPIRYEPKDETAAPVSDQVAQSLLKRVVYEDEGLLVVNKPAGIAVHGGSG 120
Query 121 VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIRKTYAAL 180
VAYGLIEAMRAAT KKYLELIHRIDRDTSGLVMISKKRSTLK LQDLLREHKIRKTYAAL
Sbjct 121 VAYGLIEAMRAATDKKYLELIHRIDRDTSGLVMISKKRSTLKHLQDLLREHKIRKTYAAL 180
Query 181 VKGQVSLDQQLIDAPLLRYELSNGERRVRVSKEGKPSKTEWRVAERFKEATLVYASPLSG 240
VKGQVSLD+QLIDAPLLRYEL+NGERRVRVSKEGKPSKTEW +AERFKEATLVYASPLSG
Sbjct 181 VKGQVSLDKQLIDAPLLRYELANGERRVRVSKEGKPSKTEWVIAERFKEATLVYASPLSG 240
Query 241 RTHQIRVHGLSIGHPLVGDDKYGHQTVYSGPEARRLCLHAMRLEIPGYPVIEAPLAEDIQ 300
RTHQIRVHGLSIGHPLVGDDKYGHQTVY+GPEARRLCLHAMRLEIP YPVIEAPL EDIQ
Sbjct 241 RTHQIRVHGLSIGHPLVGDDKYGHQTVYTGPEARRLCLHAMRLEIPDYPVIEAPLPEDIQ 300
Query 301 SVVAQLRARK 310
SVVAQLRA+K
Sbjct 301 SVVAQLRAQK 310
>A0A7T9Z6P3 Pseudouridine synthase [Acinetobacter ursingii]
Length=310
Score = 575 bits (1481), Expect = 0.0
Identities = 291/310 (94%), Positives = 302/310 (97%), Gaps = 0/310 (0%)
Query 1 MNSTQQWQSVTWFEVDEHQAGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAES 60
MNSTQQWQSVTWF+VDEHQAGQRIDNFLF+RLKGVPKSRIYRLIREGQVRVNKKRIKAES
Sbjct 1 MNSTQQWQSVTWFDVDEHQAGQRIDNFLFSRLKGVPKSRIYRLIREGQVRVNKKRIKAES 60
Query 61 KLSIGDQIRVAPIRYEQKDESDAPVSDQVAKSLLNRVVYEDEGLLVVNKPSGIAVHGGSG 120
KL+IGDQIRVAPIRYE KDE+ APVSDQVA+SLL RVVYEDEGLLVVNKP+GIAVHGGSG
Sbjct 61 KLNIGDQIRVAPIRYEPKDETAAPVSDQVAQSLLKRVVYEDEGLLVVNKPAGIAVHGGSG 120
Query 121 VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIRKTYAAL 180
VAYGLIEAMRAAT KKYLELIHRIDRDTSGLVMISKKRSTLK LQDLLREHKIRKTYAAL
Sbjct 121 VAYGLIEAMRAATDKKYLELIHRIDRDTSGLVMISKKRSTLKHLQDLLREHKIRKTYAAL 180
Query 181 VKGQVSLDQQLIDAPLLRYELSNGERRVRVSKEGKPSKTEWRVAERFKEATLVYASPLSG 240
VKGQVSLD+QLIDAPLLRYEL+NGERRVRVSKEGKPSKTEW +AERFKEATLVYASPLSG
Sbjct 181 VKGQVSLDKQLIDAPLLRYELANGERRVRVSKEGKPSKTEWVIAERFKEATLVYASPLSG 240
Query 241 RTHQIRVHGLSIGHPLVGDDKYGHQTVYSGPEARRLCLHAMRLEIPGYPVIEAPLAEDIQ 300
RTHQIRVHGLSIGHPLVGDDKYGHQTVY+GPEARRLCLHAMRLEIP YPVIEAPL EDIQ
Sbjct 241 RTHQIRVHGLSIGHPLVGDDKYGHQTVYTGPEARRLCLHAMRLEIPDYPVIEAPLPEDIQ 300
Query 301 SVVAQLRARK 310
SVVAQLRA+K
Sbjct 301 SVVAQLRAQK 310
>A0A3A8ELU5 Pseudouridine synthase [Acinetobacter guerrae]
Length=310
Score = 572 bits (1474), Expect = 0.0
Identities = 288/310 (93%), Positives = 302/310 (97%), Gaps = 0/310 (0%)
Query 1 MNSTQQWQSVTWFEVDEHQAGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAES 60
MNSTQQWQSVTWF+VDEHQAGQRIDNFLF+RLKGVPKSRIYRLIREGQVRVNKKRIKAES
Sbjct 1 MNSTQQWQSVTWFDVDEHQAGQRIDNFLFSRLKGVPKSRIYRLIREGQVRVNKKRIKAES 60
Query 61 KLSIGDQIRVAPIRYEQKDESDAPVSDQVAKSLLNRVVYEDEGLLVVNKPSGIAVHGGSG 120
KL+IGDQIRVAPIRYE KDE+ APVSDQVA+SLL RVVYEDEGLLV+NKP+GIAVHGGSG
Sbjct 61 KLNIGDQIRVAPIRYEPKDETAAPVSDQVAQSLLKRVVYEDEGLLVINKPAGIAVHGGSG 120
Query 121 VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIRKTYAAL 180
VAYGLIEA+RAATGKKYLELIHRIDRDTSGLVMISKK STLK LQDLLREHKIRKTYAAL
Sbjct 121 VAYGLIEALRAATGKKYLELIHRIDRDTSGLVMISKKCSTLKHLQDLLREHKIRKTYAAL 180
Query 181 VKGQVSLDQQLIDAPLLRYELSNGERRVRVSKEGKPSKTEWRVAERFKEATLVYASPLSG 240
VKGQVSLD+QLIDAPLLRYEL+NGERRVRVSKEGKPSKTEW +AERFK+ATLVYASPLSG
Sbjct 181 VKGQVSLDKQLIDAPLLRYELANGERRVRVSKEGKPSKTEWVIAERFKDATLVYASPLSG 240
Query 241 RTHQIRVHGLSIGHPLVGDDKYGHQTVYSGPEARRLCLHAMRLEIPGYPVIEAPLAEDIQ 300
RTHQIRVHGLSIGHPLVGDDKYGHQTVY+GPEARRLCLHAMRLEIP YPVIEAPL EDIQ
Sbjct 241 RTHQIRVHGLSIGHPLVGDDKYGHQTVYTGPEARRLCLHAMRLEIPDYPVIEAPLPEDIQ 300
Query 301 SVVAQLRARK 310
SVVAQLRA+K
Sbjct 301 SVVAQLRAKK 310
>N9FNN2 Pseudouridine synthase [Acinetobacter beijerinckii CIP
110307]
Length=310
Score = 563 bits (1450), Expect = 0.0
Identities = 277/310 (89%), Positives = 298/310 (96%), Gaps = 0/310 (0%)
Query 1 MNSTQQWQSVTWFEVDEHQAGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAES 60
MNSTQQWQSVTWF+VDEHQ GQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAE+
Sbjct 1 MNSTQQWQSVTWFDVDEHQEGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAET 60
Query 61 KLSIGDQIRVAPIRYEQKDESDAPVSDQVAKSLLNRVVYEDEGLLVVNKPSGIAVHGGSG 120
+LSIGDQIRVAPIRYEQKDESD PVSD VA+SLL+RVVYEDEGLLV+NKPSGIAVHGGSG
Sbjct 61 RLSIGDQIRVAPIRYEQKDESDVPVSDGVAQSLLSRVVYEDEGLLVINKPSGIAVHGGSG 120
Query 121 VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIRKTYAAL 180
VAYGLIEA+RAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKI+KTYAA+
Sbjct 121 VAYGLIEALRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIQKTYAAI 180
Query 181 VKGQVSLDQQLIDAPLLRYELSNGERRVRVSKEGKPSKTEWRVAERFKEATLVYASPLSG 240
VKGQVSLDQQLIDAPLLRYEL+NGERRVRV+KEGKPSKT+W+V ERFK ATLV+ASPLSG
Sbjct 181 VKGQVSLDQQLIDAPLLRYELANGERRVRVTKEGKPSKTDWKVVERFKTATLVHASPLSG 240
Query 241 RTHQIRVHGLSIGHPLVGDDKYGHQTVYSGPEARRLCLHAMRLEIPGYPVIEAPLAEDIQ 300
RTHQIRVHGLSIGHPL+GDDKYGH T Y+GPEARRLCLHAMRLEIP YP+IEAP+ ED+Q
Sbjct 241 RTHQIRVHGLSIGHPLIGDDKYGHNTAYAGPEARRLCLHAMRLEIPNYPIIEAPMPEDMQ 300
Query 301 SVVAQLRARK 310
V+ QLR +K
Sbjct 301 QVIDQLRKKK 310
>D0SPS1 Pseudouridine synthase [Acinetobacter junii SH205]
Length=310
Score = 562 bits (1448), Expect = 0.0
Identities = 278/310 (90%), Positives = 298/310 (96%), Gaps = 0/310 (0%)
Query 1 MNSTQQWQSVTWFEVDEHQAGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAES 60
MNSTQQWQSVTWF+VDEHQ GQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAE+
Sbjct 1 MNSTQQWQSVTWFDVDEHQEGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAET 60
Query 61 KLSIGDQIRVAPIRYEQKDESDAPVSDQVAKSLLNRVVYEDEGLLVVNKPSGIAVHGGSG 120
+LSIGDQIRVAPIRYEQKDE+DAPVSD VA+SLL+RVVYEDEGLLVVNKPSGIAVHGGSG
Sbjct 61 RLSIGDQIRVAPIRYEQKDETDAPVSDGVAQSLLSRVVYEDEGLLVVNKPSGIAVHGGSG 120
Query 121 VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIRKTYAAL 180
VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKI+KTYAA+
Sbjct 121 VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIKKTYAAI 180
Query 181 VKGQVSLDQQLIDAPLLRYELSNGERRVRVSKEGKPSKTEWRVAERFKEATLVYASPLSG 240
VKGQVSLDQQLIDAPLLRYEL+NGERRVRV+KEGKPSKTEW+V ERFK ATLV+ASPLSG
Sbjct 181 VKGQVSLDQQLIDAPLLRYELANGERRVRVTKEGKPSKTEWKVIERFKAATLVHASPLSG 240
Query 241 RTHQIRVHGLSIGHPLVGDDKYGHQTVYSGPEARRLCLHAMRLEIPGYPVIEAPLAEDIQ 300
RTHQIRVHGLSIGHPL+GDDKYGH T Y+GPEARRLCLHAMRL+IP YP IEAP+ ED+Q
Sbjct 241 RTHQIRVHGLSIGHPLIGDDKYGHNTAYTGPEARRLCLHAMRLDIPNYPTIEAPMPEDMQ 300
Query 301 SVVAQLRARK 310
V+ +LR +K
Sbjct 301 QVINELRKQK 310
>S7WV91 Pseudouridine synthase [Acinetobacter junii CIP 107470
= MTCC 11364]
Length=310
Score = 562 bits (1448), Expect = 0.0
Identities = 278/310 (90%), Positives = 298/310 (96%), Gaps = 0/310 (0%)
Query 1 MNSTQQWQSVTWFEVDEHQAGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAES 60
MNSTQQWQSVTWF+VDEHQ GQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAE+
Sbjct 1 MNSTQQWQSVTWFDVDEHQEGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAET 60
Query 61 KLSIGDQIRVAPIRYEQKDESDAPVSDQVAKSLLNRVVYEDEGLLVVNKPSGIAVHGGSG 120
+LSIGDQIRVAPIRYEQKDE+DAPVSD VA+SLL+RVVYEDEGLLVVNKPSGIAVHGGSG
Sbjct 61 RLSIGDQIRVAPIRYEQKDETDAPVSDGVAQSLLSRVVYEDEGLLVVNKPSGIAVHGGSG 120
Query 121 VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIRKTYAAL 180
VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKI+KTYAA+
Sbjct 121 VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIKKTYAAI 180
Query 181 VKGQVSLDQQLIDAPLLRYELSNGERRVRVSKEGKPSKTEWRVAERFKEATLVYASPLSG 240
VKGQVSLDQQLIDAPLLRYEL+NGERRVRV+KEGKPSKTEW+V ERFK ATLV+ASPLSG
Sbjct 181 VKGQVSLDQQLIDAPLLRYELANGERRVRVTKEGKPSKTEWKVIERFKAATLVHASPLSG 240
Query 241 RTHQIRVHGLSIGHPLVGDDKYGHQTVYSGPEARRLCLHAMRLEIPGYPVIEAPLAEDIQ 300
RTHQIRVHGLSIGHPL+GDDKYGH T Y+GPEARRLCLHAMRL+IP YP IEAP+ ED+Q
Sbjct 241 RTHQIRVHGLSIGHPLIGDDKYGHNTAYTGPEARRLCLHAMRLDIPNYPTIEAPMPEDMQ 300
Query 301 SVVAQLRARK 310
V+ +LR +K
Sbjct 301 QVINELRKQK 310
>A0A3C0RI62 Pseudouridine synthase [Acinetobacter junii]
Length=310
Score = 562 bits (1448), Expect = 0.0
Identities = 278/310 (90%), Positives = 298/310 (96%), Gaps = 0/310 (0%)
Query 1 MNSTQQWQSVTWFEVDEHQAGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAES 60
MNSTQQWQSVTWF+VDEHQ GQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAE+
Sbjct 1 MNSTQQWQSVTWFDVDEHQEGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAET 60
Query 61 KLSIGDQIRVAPIRYEQKDESDAPVSDQVAKSLLNRVVYEDEGLLVVNKPSGIAVHGGSG 120
+LSIGDQIRVAPIRYEQKDE+DAPVSD VA+SLL+RVVYEDEGLLVVNKPSGIAVHGGSG
Sbjct 61 RLSIGDQIRVAPIRYEQKDETDAPVSDGVAQSLLSRVVYEDEGLLVVNKPSGIAVHGGSG 120
Query 121 VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIRKTYAAL 180
VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKI+KTYAA+
Sbjct 121 VAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIKKTYAAI 180
Query 181 VKGQVSLDQQLIDAPLLRYELSNGERRVRVSKEGKPSKTEWRVAERFKEATLVYASPLSG 240
VKGQVSLDQQLIDAPLLRYEL+NGERRVRV+KEGKPSKTEW+V ERFK ATLV+ASPLSG
Sbjct 181 VKGQVSLDQQLIDAPLLRYELANGERRVRVTKEGKPSKTEWKVIERFKAATLVHASPLSG 240
Query 241 RTHQIRVHGLSIGHPLVGDDKYGHQTVYSGPEARRLCLHAMRLEIPGYPVIEAPLAEDIQ 300
RTHQIRVHGLSIGHPL+GDDKYGH T Y+GPEARRLCLHAMRL+IP YP IEAP+ ED+Q
Sbjct 241 RTHQIRVHGLSIGHPLIGDDKYGHNTAYTGPEARRLCLHAMRLDIPNYPTIEAPMPEDMQ 300
Query 301 SVVAQLRARK 310
V+ +LR +K
Sbjct 301 QVINELRKQK 310
>D4AH69 Pseudouridine synthase [Bifidobacterium bifidum]
Length=313
Score = 147 bits (371), Expect = 3e-45
Identities = 105/307 (34%), Positives = 162/307 (53%), Gaps = 34/307 (11%)
Query 21 GQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAESKLSIGDQIR--VAPIRYEQK 78
G R D +++ G+ +++ LI GQ RV + I L G+ + +A R+E +
Sbjct 13 GSRFD-VAVSKMLGISRAKAADLIESGQARVLDRAIAKSGTLLYGETVEFDIAEERHEPE 71
Query 79 DESDAPVSDQVAKSLLNRVVYEDEGLLVVNKPSGIAVHGGSG----------VAYGLIEA 128
PV +A +VYED+ ++VV+KP G+A H +G + G+
Sbjct 72 -----PVCLDMA------IVYEDDDVVVVDKPVGVAAHASAGWTGPTVLGSLLKRGVRIT 120
Query 129 MRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIRKTYAALVKGQVSLD 188
A G++ ++ R+D TSGL+++ K K ++ EH++ KTY A+V+G + D
Sbjct 121 SYGAPGRQ--GIVSRLDVGTSGLMLVCKSELAYKEMRRQFSEHEVVKTYHAMVQGNLKED 178
Query 189 QQLIDAPLLRYELSNGERRVRVSKEGKPSKTEWRVAERFKEATLVYASPLSGRTHQIRVH 248
+ I+AP+ R ++S + R V+ GKP+ T W V +RF EATLV + +GRTHQIRVH
Sbjct 179 KATIEAPIGRAKVS--DFRFCVTPSGKPAVTHWDVLDRFGEATLVSVNLETGRTHQIRVH 236
Query 249 GLSIGHPLVGDDKYGHQTVYSGP-EARRLCLHAMRLEIPG-----YPVIEAPLAEDIQSV 302
SIGHPLVGD YG V +G R LHAM+LE + +E+ D+
Sbjct 237 FSSIGHPLVGDPMYGANPVLAGELGLDRQWLHAMKLEFRHPRTHLWTSVESHYPADLAHA 296
Query 303 VAQLRAR 309
+ +RAR
Sbjct 297 LELMRAR 303
>Q6GUL5 Pseudouridine synthase [Prevotella nigrescens]
Length=363
Score = 138 bits (348), Expect = 2e-41
Identities = 94/272 (35%), Positives = 138/272 (51%), Gaps = 26/272 (10%)
Query 14 EVDEHQAGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAESKLSIGDQIRVAPI 73
EVD+ Q RID FLF R++ ++RI + G + VN +K+ K+ D I +
Sbjct 37 EVDKGQEAVRIDKFLFERMQHSSRNRIQKAADAGSIYVNGTPVKSNYKVRPNDVITLM-- 94
Query 74 RYEQKDESDAPVSDQ--VAKSLLNRVVYEDEGLLVVNKPSGIAVHGGSG---------VA 122
D P D VA+ + VVYED ++V+NKP+G+ VH G+G +A
Sbjct 95 -------LDRPKHDNTIVAEDMPLNVVYEDNEIMVINKPAGLVVHPGAGNFRGTLINAIA 147
Query 123 YGLIEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIRKTYAALVK 182
+ L + + L+HRID+DTSGL++I+K L ++Y ALV
Sbjct 148 WHLRDLKNFDPNDPAVGLVHRIDKDTSGLLLIAKTPDAKTFLGKQFFNKTTHRSYVALVW 207
Query 183 GQVSLDQQLIDAPLLRYELSNGERRVRV----SKEGKPSKTEWRVAERFKEATLVYASPL 238
G + D+ I+ + R S R++V S GKP+ T ++V ERF TL+
Sbjct 208 GNFTEDEGRIEGNIGRD--SKDRLRMKVFDTDSGIGKPAVTHYKVLERFGYTTLIECILE 265
Query 239 SGRTHQIRVHGLSIGHPLVGDDKYGHQTVYSG 270
+GRTHQIR H IGHPL GD++YG + G
Sbjct 266 TGRTHQIRAHMKHIGHPLFGDERYGGTEILRG 297
>Q9F461 Pseudouridine synthase [Nostoc sp. (strain PCC 7120 /
SAG 25.82 / UTEX 2576)]
Length=312
Score = 135 bits (341), Expect = 7e-41
Identities = 91/284 (32%), Positives = 149/284 (52%), Gaps = 21/284 (7%)
Query 12 WFEVDEHQAGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAES-KLSIGDQIRV 70
+ EV+E A RID +L L + +SRI +LI +G+V+VN K ++ L +GD+I +
Sbjct 6 YLEVEEDSA--RIDRYLAEELPDLSRSRIQQLIEQGKVQVNGKVCTSKKINLKVGDRITL 63
Query 71 APIRYEQKDESDAPVSDQVAKSLLNRVVYEDEGLLVVNKPSGIAVHGGSGVAYG-LIEAM 129
+ +A + A+ + ++YED+ LL++NKP+G+ VH G ++G L+ A+
Sbjct 64 --------EVPEAQPLEIQAEDIPLDILYEDDQLLILNKPAGLVVHPAPGHSHGTLVNAL 115
Query 130 RAAT-------GKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIRKTYAALVK 182
A G + ++HR+D+DT+G + I+K K +Q L+ R+ Y +V
Sbjct 116 LAHCPDLPGIGGVQRPGIVHRLDKDTTGAIAIAKTDIAYKHIQAQLQAKTARREYLGVVY 175
Query 183 GQVSLDQQLIDAPLLRYELSNGERRV-RVSKEGKPSKTEWRVAERFKEATLVYASPLSGR 241
G +D P+ R+ + V + + G+ + T W++ ER TL++ +GR
Sbjct 176 GAPKTASGKVDLPIGRHPQDRKKMAVVPIEEGGRSAITHWQIQERLGNFTLIHFQLETGR 235
Query 242 THQIRVHGLSIGHPLVGDDKYGHQTVYSGPEARRLCLHAMRLEI 285
THQIRVH +GHP+VGD YG G LHA RL +
Sbjct 236 THQIRVHSAKMGHPIVGDPVYGSGRSV-GVNLPGQALHAWRLRL 278
>Q7X4J9 Pseudouridine synthase [Streptococcus suis]
Length=297
Score = 133 bits (335), Expect = 4e-40
Identities = 90/265 (34%), Positives = 139/265 (52%), Gaps = 19/265 (7%)
Query 14 EVDEHQAGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAESKLSIGDQIRVAPI 73
EV G R+D L + L + +S I+ GQV VN + KA+ + +GD +
Sbjct 2 EVRVEVGGIRLDKAL-SDLTDLSRSVANEQIKAGQVLVNGQPKKAKYSVQVGDVLTYQIP 60
Query 74 RYEQKDESDAPVSDQVAKSLLNRVVYEDEGLLVVNKPSGIAVHGGSGVAYGL-------- 125
E+ D VA+ + +V++DE + VVNKP G+ VH +G G
Sbjct 61 EVEE--------IDYVAEDIPLEIVFQDEDVAVVNKPQGMVVHPSAGHTSGTLVNALLYH 112
Query 126 IEAMRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIRKTYAALVKGQV 185
++ + G ++HRID+DTSGL+MI+K L L++ K + Y A+V G +
Sbjct 113 VKDLSGINGVLRPGIVHRIDKDTSGLLMIAKNDDAHTKLAAELKDKKSLRKYWAIVHGNL 172
Query 186 SLDQQLIDAPLLRYELSNGERRVRVSKEGKPSKTEWRVAERFKEATLVYASPLSGRTHQI 245
D+ +I+AP+ R E ++ V+ +GK + T ++V ERF + TLV + +GRTHQI
Sbjct 173 PNDRGVIEAPIGRSE--KDRKKQAVTAKGKEAVTRFQVLERFGDYTLVELTLETGRTHQI 230
Query 246 RVHGLSIGHPLVGDDKYGHQTVYSG 270
RVH IGHP+ GD+ YG + G
Sbjct 231 RVHMAYIGHPVAGDEAYGPRKTLKG 255
>Q9KHC3 Pseudouridine synthase [secondary endosymbiont of Glycaspis
brimblecombei]
Length=314
Score = 117 bits (293), Expect = 7e-34
Identities = 81/252 (32%), Positives = 126/252 (50%), Gaps = 15/252 (6%)
Query 17 EHQAGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAESKLSIGDQIRVAPIRYE 76
E Q GQR+D L +SRI I + +V+VN K I + G + + E
Sbjct 2 ESQLGQRLDQTLAELFPDYSRSRIKEWILDNRVQVNGKIINRPKEKVFGSEQIAIDVLIE 61
Query 77 QKDESDAPVSDQVAKSLLNRVVYEDEGLLVVNKPSGIAVHGGSG-----VAYGLIEAMRA 131
+ D P +++ +VYED+ ++V+NKP + VH G+G V L+
Sbjct 62 E-DMRWQP------QNIPLNIVYEDDEIIVINKPRDLVVHPGAGNPDGTVLNALLYRYPE 114
Query 132 ATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIRKTYAALVKGQVSLDQQL 191
++HR+D+DT+GL++I+K L + L+ +I + Y A+V G+++
Sbjct 115 IINVPRAGIVHRLDKDTTGLMVIAKTIPAQTHLVEALQLREITREYEAVVNGRMTAGGT- 173
Query 192 IDAPLLRYELSNGERRVRVSKEGKPSKTEWRVAERFKEATLVYASPLSGRTHQIRVHGLS 251
+D P+ R+ + + GKP+ T +RV E F+ T + SGRTHQIRVH
Sbjct 174 VDEPIARHPTKR--THMAIHPLGKPAITHYRVMEHFRAHTRLRLRLESGRTHQIRVHMAH 231
Query 252 IGHPLVGDDKYG 263
I HPLVGD YG
Sbjct 232 INHPLVGDPVYG 243
>A0A7U3RVT0 Pseudouridine synthase [Wolbachia endosymbiont of
Anoplolepis gracilipes]
Length=321
Score = 112 bits (281), Expect = 4e-32
Identities = 90/311 (29%), Positives = 148/311 (48%), Gaps = 21/311 (7%)
Query 9 SVTWFEVDEHQAGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAESKLSIGDQI 68
SV V+ + R+D ++ + + +S+ RLI+ QV++ I + D+
Sbjct 6 SVITLSVNNDKEKLRLDIYIAEKCN-ISRSKAQRLIQNEQVKLLGTPIINNDYIVKPDEE 64
Query 69 RVAPIRYEQKDESDAPVSDQVAKSLLNRVVYEDEGLLVVNKPSGIAVHGGSGVAYGLIEA 128
V + S P D + +VYEDE ++V++K SG+ VH G+G +
Sbjct 65 YVVHLVQPDISTSIEPNYD-----IKLDIVYEDEDIIVLSKQSGLTVHPGAGTNNDTLLN 119
Query 129 MRAATGKKYLELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIRKTYAALVKGQVSLD 188
A L ++HR+D+DTSGL++I+K L +LL K+++ Y A+V G +S
Sbjct 120 AVIAHLDVRLGIVHRLDKDTSGLMVIAKNEEAHSFLSELLSNRKVKREYLAVVWGTLSSQ 179
Query 189 QQLIDAPLLRYELSNGERRVRVSKEGKPSKTEWRVAERFKEATLVYASPLSGRTHQIRVH 248
Q I+ + + N E GK + T + V + +A+LV + +GRTHQIRVH
Sbjct 180 QGTIETNIAP-KRGNKEMMCVTKTTGKLAITHYSVEKVIGQASLVKCTLETGRTHQIRVH 238
Query 249 GLSIGHPLVGDDKYGHQTVYSGPEAR---------RLCLHAMRLEI-----PGYPVIEAP 294
IGH +VGD YG + S A+ R LHA L + Y +
Sbjct 239 MSHIGHSIVGDQVYGKNSSKSTKYAKNSSFIRNFNRQALHAYTLGLYHPKSNKYMEFVSD 298
Query 295 LAEDIQSVVAQ 305
L +DI++++ +
Sbjct 299 LPQDIKTLIGE 309
>Q7Z110 Ribosomal large subunit pseudouridine synthase C [Paramecium
tetraurelia]
Length=350
Score = 112 bits (279), Expect = 1e-31
Identities = 88/293 (30%), Positives = 147/293 (50%), Gaps = 27/293 (9%)
Query 20 AGQRIDNFLFTRLKGVPKSRIYRLIREGQVRVNKKRIKAES-KLSIGDQIRVAPIRYEQK 78
+G RID FL L + + +LIR G++ VN K+IK L GD + +Q
Sbjct 23 SGTRIDKFLIADLNR-SWNEVQKLIRNGEINVNNKKIKDHQFLLKEGDVVTYWDKLKKQA 81
Query 79 DESDAPVSD-QVAKSLLNRVVYEDEGLLVVNKPSGIAVHGGSGVAYGLIEAMRAATGKKY 137
D PV + Q + L ++YE++ ++++NK G A GG+ Y + E + Y
Sbjct 82 DTQLRPVPNTQAYEELKKMILYENDQIIILNKKHGYASQGGANPNYNIPEILNLYFKNFY 141
Query 138 LELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHK-IRKTYAALVKGQVSLDQQLIDAPL 196
+IHR+D+ TSGL++I+K + + +++E I K Y A+V+GQ+ + + LID PL
Sbjct 142 --IIHRLDQLTSGLLIIAKNKDIATEISTIIQEKAFITKKYIAVVQGQIKVQKGLIDRPL 199
Query 197 LRYELSNGERRVRVSK----EGK--PSKTEWRVAERFKEATLVYA----SPLSGRTHQIR 246
L +N +++ ++ EGK P++T + V E ++ +Y+ GR HQIR
Sbjct 200 LFN--TNNQKQTCYNEEQLLEGKYLPARTSYEVIEEYQYQDEMYSILDLQIFEGRKHQIR 257
Query 247 VH-GLSIGHPLVGDDKYGHQTVYSG--------PEARRLCLHAMRLEIPGYPV 290
H + P++ D KYG Q + E + + L A R+ +PV
Sbjct 258 AHLSQVLNTPILFDQKYGFQFTKTNRDLQTSIFGEDQGIMLQAKRIVFQNFPV 310
>Q9FAT9 Pseudouridine synthase [Rhizobium meliloti]
Length=264
Score = 104 bits (259), Expect = 2e-29
Identities = 82/254 (32%), Positives = 124/254 (49%), Gaps = 47/254 (19%)
Query 97 VVYEDEGLLVVNKPSGIAVHGGSGVAYGLI---------EAMRAATGKKYLELIHRIDRD 147
V+YED L+V+ KP+G+ VH G+G G + +++ G K ++HR+D+D
Sbjct 13 VLYEDADLIVLVKPAGLVVHPGAGNWTGTLVNALIHHCGDSLSGIGGVKRPGIVHRLDKD 72
Query 148 TSGLVMISKKRSTLKLLQDLLREH----KIRKTYAALVKGQVSLDQQLIDAPLLRYELSN 203
TSG+++++K + + L D +H + + Y A+V G+ + IDAPL R
Sbjct 73 TSGVMVVAKNDAAHRHLSDQFADHGRNGPLERAYRAVVWGRPRQLKGKIDAPLGRA---- 128
Query 204 GERRVRVSK-----EGKPSKTEWRVAERFKE-------ATLVYASPLSGRTHQIRVHGLS 251
G+R R K + + + T + V ER+ E A+ V +GRTHQIRVH
Sbjct 129 GDRTKRAVKREDSDDAREAITHYEVVERYHEKPDGTSLASTVECHLETGRTHQIRVHMAH 188
Query 252 IGHPLVGDDKYG---HQTVYSGPEARRL--------CLHAMRLEIPGYPV------IEAP 294
IGHPL+GD YG PE R LHA L+ +P E P
Sbjct 189 IGHPLIGDPDYGAAFRTKANLLPEPARAAVNRFPRQALHAFMLQFE-HPATGETMHFETP 247
Query 295 LAEDIQSVVAQLRA 308
+ D+Q ++A LRA
Sbjct 248 VPADMQELIAALRA 261
>A0A8B6X1F8 Pseudouridine synthase [Derxia gummosa DSM 723]
Length=252
Score = 91.3 bits (225), Expect = 1e-24
Identities = 70/232 (30%), Positives = 108/232 (47%), Gaps = 40/232 (17%)
Query 97 VVYEDEGLLVVNKPSGIAVHGGSGVAYGLIEAMRAATGKKYLELIHRIDRDTSGLVMISK 156
+++ D+ L+VV KP+G+ G G + A R ++HR+D TSG+V +
Sbjct 22 LLHADDALVVVVKPAGLLSVPGRGAGHADCLAARVQARFADALVVHRLDLATSGIVCFGR 81
Query 157 KRSTLKLLQDLLREHKIRKTYAALVKGQVSLDQQLIDAPLLRYELSNGERRVRVSKEGKP 216
+ + L + + K Y A+V G+ + D ID PL+ + N R++ GKP
Sbjct 82 GAAAQRELSRQFQARETAKRYVAVVAGRPAADAGEIDLPLI-CDWPNRPRQMVSFTHGKP 140
Query 217 SKTEWRVAERFKEATL----------------------------VYASPLSGRTHQIRVH 248
S T WR A + V P++GR+HQ+RVH
Sbjct 141 SLTRWRRLAATAVADMADGHASLAAPLAVRNDAGSDAAAIACSRVELEPVTGRSHQLRVH 200
Query 249 GLSIGHPLVGDDKYGHQTVYSGPEAR----RLCLHAMRLEIPGYPVIEAPLA 296
L++GHP++GD+ +Y+ P AR RL LHA RL + +PV PLA
Sbjct 201 LLALGHPILGDE------LYAPPPARDAAPRLLLHASRLALT-HPVDGFPLA 245
>A0A7U3RUG2 Pseudouridine synthase [Wolbachia endosymbiont of
Anoplolepis gracilipes]
Length=197
Score = 88.2 bits (217), Expect = 5e-24
Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 15/182 (8%)
Query 138 LELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIRKTYAALVKGQVSLDQQLIDAPLL 197
L ++HR+D+DTSGL++I+K L +LL K+++ Y A+V G +S Q I+ +
Sbjct 5 LGIVHRLDKDTSGLMVIAKNEEAHSFLSELLSNRKVKREYLAVVWGTLSSQQGTIETNIA 64
Query 198 RYELSNGERRVRVSKEGKPSKTEWRVAERFKEATLVYASPLSGRTHQIRVHGLSIGHPLV 257
+ N E GK + T + V + +A+LV + +GRTHQIRVH IGH +V
Sbjct 65 P-KRGNKEMMCVTKTTGKLAITHYSVEKVIGQASLVKCTLETGRTHQIRVHMSHIGHSIV 123
Query 258 GDDKYGHQTVYSGPEAR---------RLCLHAMRLEI-----PGYPVIEAPLAEDIQSVV 303
GD YG + S A+ R LHA L + Y + L +DI++++
Sbjct 124 GDQVYGKNSSKSTKYAKNSSFIRNFNRQALHAYTLGLYHPKSNKYMEFVSDLPQDIKTLI 183
Query 304 AQ 305
+
Sbjct 184 GE 185
>A0A7U3NFZ1 Pseudouridine synthase [Wolbachia endosymbiont of
Anoplolepis gracilipes]
Length=197
Score = 88.2 bits (217), Expect = 5e-24
Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 15/182 (8%)
Query 138 LELIHRIDRDTSGLVMISKKRSTLKLLQDLLREHKIRKTYAALVKGQVSLDQQLIDAPLL 197
L ++HR+D+DTSGL++I+K L +LL K+++ Y A+V G +S Q I+ +
Sbjct 5 LGIVHRLDKDTSGLMVIAKNEEAHSFLSELLSNRKVKREYLAVVWGTLSSQQGTIETNIA 64
Query 198 RYELSNGERRVRVSKEGKPSKTEWRVAERFKEATLVYASPLSGRTHQIRVHGLSIGHPLV 257
+ N E GK + T + V + +A+LV + +GRTHQIRVH IGH +V
Sbjct 65 P-KRGNKEMMCVTKTTGKLAITHYSVEKVIGQASLVKCTLETGRTHQIRVHMSHIGHSIV 123
Query 258 GDDKYGHQTVYSGPEAR---------RLCLHAMRLEI-----PGYPVIEAPLAEDIQSVV 303
GD YG + S A+ R LHA L + Y + L +DI++++
Sbjct 124 GDQVYGKNSSKSTKYAKNSSFIRNFNRQALHAYTLGLYHPKSNKYMEFVSDLPQDIKTLI 183
Query 304 AQ 305
+
Sbjct 184 GE 185
Lambda K H a alpha
0.320 0.136 0.388 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1786054
Database: 163b0ccd3626dc189bc9a44c9e90b538.TrEMBL.fasta
Posted date: May 11, 2024 8:57 PM
Number of letters in database: 8,140
Number of sequences in database: 27
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
