BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: e17e037751546ba65cb6400c5bca96be.TrEMBL.fasta
22 sequences; 6,787 total letters
Query= ACIAD0457
Length=310
Score E
Sequences producing significant alignments: (Bits) Value
Q6FEW5 Putative transcriptional regulator [Acinetobacter baylyi (... 603 0.0
A0A7G2SCJ9 LysR family transcriptional regulator [Acinetobacter sp] 603 0.0
A0A009Z968 Bacterial regulatory helix-turn-helix, lysR family pro... 422 4e-153
A0A7T9UG96 LysR family transcriptional regulator [Acinetobacter u... 422 4e-153
A0A3F3L899 LysR family transcriptional regulator [Acinetobacter u... 421 9e-153
N9C1H4 HTH lysR-type domain-containing protein [Acinetobacter urs... 421 9e-153
A0A3A8F3C0 LysR family transcriptional regulator [Acinetobacter g... 420 3e-152
A0A3R9C9S0 LysR family transcriptional regulator [Acinetobacter s... 420 4e-152
A0A1G6HG17 DNA-binding transcriptional regulator, LysR family [Ac... 387 2e-139
A0A1Z9Z0T5 LysR family transcriptional regulator [Acinetobacter p... 379 6e-136
A0A240EFI5 DNA-binding transcriptional regulator, LysR family [Ac... 369 3e-132
A0A1J4NGT8 LysR family transcriptional regulator [Acinetobacter s... 369 6e-132
B6D1N3 Transcriptional regulator [Klebsiella pneumoniae] 290 4e-101
Q52868 Similarity to members of the LysR family [Rhizobium legumi... 127 5e-38
Q6PSU0 CidR [Staphylococcus aureus] 89.4 9e-24
Q32X76 Transcriptional regulator [Pseudomonas fluorescens] 80.5 1e-20
H9ZYM9 Transcriptional regulator LysR family [Candidatus Thiodict... 80.1 2e-20
P73862 Rubisco operon transcriptional regulator [Synechocystis sp... 79.0 6e-20
F6KXC4 LysR family transcriptional regulator [Streptomyces griseo... 74.7 2e-18
Q8KSC7 HTH-type transcriptional regulator CbbR [Methylorubrum ext... 74.3 3e-18
O33748 CO2-concentrating mechanism regulator [Synechococcus sp. (... 73.6 4e-18
Q6WW51 Putative transcriptional regulator [Pseudomonas fluorescens] 72.8 7e-18
>Q6FEW5 Putative transcriptional regulator [Acinetobacter baylyi
(strain ATCC 33305 / BD413 / ADP1)]
Length=309
Score = 603 bits (1554), Expect = 0.0
Identities = 309/309 (100%), Positives = 309/309 (100%), Gaps = 0/309 (0%)
Query 1 MSIPFSRFSDYFMTVAKTGNLRKAADQLHISVSAVHRQIALAEEELDIALFERLPNGLKL 60
MSIPFSRFSDYFMTVAKTGNLRKAADQLHISVSAVHRQIALAEEELDIALFERLPNGLKL
Sbjct 1 MSIPFSRFSDYFMTVAKTGNLRKAADQLHISVSAVHRQIALAEEELDIALFERLPNGLKL 60
Query 61 TLAGEMLYSDVLRWQKEYKQTCMRFDEIQGLKRGAIELGLIAALSDGFVVDVLATLQSEF 120
TLAGEMLYSDVLRWQKEYKQTCMRFDEIQGLKRGAIELGLIAALSDGFVVDVLATLQSEF
Sbjct 61 TLAGEMLYSDVLRWQKEYKQTCMRFDEIQGLKRGAIELGLIAALSDGFVVDVLATLQSEF 120
Query 121 PWITLNILTDDSDVLINKIITNEIDVGLILDPVVSAQLDVMSFVEIPIGFVMCPDHPLAQ 180
PWITLNILTDDSDVLINKIITNEIDVGLILDPVVSAQLDVMSFVEIPIGFVMCPDHPLAQ
Sbjct 121 PWITLNILTDDSDVLINKIITNEIDVGLILDPVVSAQLDVMSFVEIPIGFVMCPDHPLAQ 180
Query 181 HTHLTLSQTLDTRHIVPDQPLVIHDRVMAMYKKYHANPAQITLSNDIRLIQSMLKKNMGI 240
HTHLTLSQTLDTRHIVPDQPLVIHDRVMAMYKKYHANPAQITLSNDIRLIQSMLKKNMGI
Sbjct 181 HTHLTLSQTLDTRHIVPDQPLVIHDRVMAMYKKYHANPAQITLSNDIRLIQSMLKKNMGI 240
Query 241 ALLSYLDVYSAVEKQELIFIPLEDKTIQPLTLALCSGSRRQLSRIAQLLIRTLTEQMEIK 300
ALLSYLDVYSAVEKQELIFIPLEDKTIQPLTLALCSGSRRQLSRIAQLLIRTLTEQMEIK
Sbjct 241 ALLSYLDVYSAVEKQELIFIPLEDKTIQPLTLALCSGSRRQLSRIAQLLIRTLTEQMEIK 300
Query 301 FNHALAGFK 309
FNHALAGFK
Sbjct 301 FNHALAGFK 309
>A0A7G2SCJ9 LysR family transcriptional regulator [Acinetobacter
sp]
Length=309
Score = 603 bits (1554), Expect = 0.0
Identities = 309/309 (100%), Positives = 309/309 (100%), Gaps = 0/309 (0%)
Query 1 MSIPFSRFSDYFMTVAKTGNLRKAADQLHISVSAVHRQIALAEEELDIALFERLPNGLKL 60
MSIPFSRFSDYFMTVAKTGNLRKAADQLHISVSAVHRQIALAEEELDIALFERLPNGLKL
Sbjct 1 MSIPFSRFSDYFMTVAKTGNLRKAADQLHISVSAVHRQIALAEEELDIALFERLPNGLKL 60
Query 61 TLAGEMLYSDVLRWQKEYKQTCMRFDEIQGLKRGAIELGLIAALSDGFVVDVLATLQSEF 120
TLAGEMLYSDVLRWQKEYKQTCMRFDEIQGLKRGAIELGLIAALSDGFVVDVLATLQSEF
Sbjct 61 TLAGEMLYSDVLRWQKEYKQTCMRFDEIQGLKRGAIELGLIAALSDGFVVDVLATLQSEF 120
Query 121 PWITLNILTDDSDVLINKIITNEIDVGLILDPVVSAQLDVMSFVEIPIGFVMCPDHPLAQ 180
PWITLNILTDDSDVLINKIITNEIDVGLILDPVVSAQLDVMSFVEIPIGFVMCPDHPLAQ
Sbjct 121 PWITLNILTDDSDVLINKIITNEIDVGLILDPVVSAQLDVMSFVEIPIGFVMCPDHPLAQ 180
Query 181 HTHLTLSQTLDTRHIVPDQPLVIHDRVMAMYKKYHANPAQITLSNDIRLIQSMLKKNMGI 240
HTHLTLSQTLDTRHIVPDQPLVIHDRVMAMYKKYHANPAQITLSNDIRLIQSMLKKNMGI
Sbjct 181 HTHLTLSQTLDTRHIVPDQPLVIHDRVMAMYKKYHANPAQITLSNDIRLIQSMLKKNMGI 240
Query 241 ALLSYLDVYSAVEKQELIFIPLEDKTIQPLTLALCSGSRRQLSRIAQLLIRTLTEQMEIK 300
ALLSYLDVYSAVEKQELIFIPLEDKTIQPLTLALCSGSRRQLSRIAQLLIRTLTEQMEIK
Sbjct 241 ALLSYLDVYSAVEKQELIFIPLEDKTIQPLTLALCSGSRRQLSRIAQLLIRTLTEQMEIK 300
Query 301 FNHALAGFK 309
FNHALAGFK
Sbjct 301 FNHALAGFK 309
>A0A009Z968 Bacterial regulatory helix-turn-helix, lysR family
protein [Acinetobacter sp. 479375]
Length=308
Score = 422 bits (1085), Expect = 4e-153
Identities = 206/298 (69%), Positives = 257/298 (86%), Gaps = 0/298 (0%)
Query 1 MSIPFSRFSDYFMTVAKTGNLRKAADQLHISVSAVHRQIALAEEELDIALFERLPNGLKL 60
M++PFSRF++YF+ VA+T NL KAA+QL ISVSAVHRQI LAEE+LDIALFERLPNGLKL
Sbjct 1 MNVPFSRFAEYFLVVAETENLHKAAEQLFISVSAVHRQITLAEEQLDIALFERLPNGLKL 60
Query 61 TLAGEMLYSDVLRWQKEYKQTCMRFDEIQGLKRGAIELGLIAALSDGFVVDVLATLQSEF 120
TLAGE+LYSD+LRW+KE++QT +RFDEIQGLKRG+IELGLI+ALSDGFV++ LA LQ ++
Sbjct 61 TLAGELLYSDLLRWKKEFQQTRIRFDEIQGLKRGSIELGLISALSDGFVIESLADLQQQY 120
Query 121 PWITLNILTDDSDVLINKIITNEIDVGLILDPVVSAQLDVMSFVEIPIGFVMCPDHPLAQ 180
PWI+ NI T +S V+I KII EID GLILDP++ QLDV+SF+EIPIGFVM PDH LA
Sbjct 121 PWISFNIHTHESKVIIQKIINTEIDFGLILDPIIHTQLDVLSFIEIPIGFVMSPDHVLAN 180
Query 181 HTHLTLSQTLDTRHIVPDQPLVIHDRVMAMYKKYHANPAQITLSNDIRLIQSMLKKNMGI 240
+ LTL+ T ++RHI+ D PL+IH+RVMAMYKK H P TL+NDIRL+ SMLK+NMGI
Sbjct 181 QSKLTLADTFESRHIMADAPLIIHERVMAMYKKQHIVPIHQTLTNDIRLMISMLKRNMGI 240
Query 241 ALLSYLDVYSAVEKQELIFIPLEDKTIQPLTLALCSGSRRQLSRIAQLLIRTLTEQME 298
A+LSYLDVY+AV +EL+F+P+ +K IQPLTLALC+G RRQLSRI+Q+LI+ L+++ME
Sbjct 241 AILSYLDVYTAVANKELVFVPIHEKGIQPLTLALCAGQRRQLSRISQILIQQLSQKME 298
>A0A7T9UG96 LysR family transcriptional regulator [Acinetobacter
ursingii]
Length=308
Score = 422 bits (1085), Expect = 4e-153
Identities = 206/298 (69%), Positives = 257/298 (86%), Gaps = 0/298 (0%)
Query 1 MSIPFSRFSDYFMTVAKTGNLRKAADQLHISVSAVHRQIALAEEELDIALFERLPNGLKL 60
M++PFSRF++YF+ VA+T NL KAA+QL ISVSAVHRQI LAEE+LDIALFERLPNGLKL
Sbjct 1 MNVPFSRFAEYFLVVAETENLHKAAEQLFISVSAVHRQITLAEEQLDIALFERLPNGLKL 60
Query 61 TLAGEMLYSDVLRWQKEYKQTCMRFDEIQGLKRGAIELGLIAALSDGFVVDVLATLQSEF 120
TLAGE+LYSD+LRW+KE++QT +RFDEIQGLKRG+IELGLI+ALSDGFV++ LA LQ ++
Sbjct 61 TLAGELLYSDLLRWKKEFQQTRIRFDEIQGLKRGSIELGLISALSDGFVIESLADLQQQY 120
Query 121 PWITLNILTDDSDVLINKIITNEIDVGLILDPVVSAQLDVMSFVEIPIGFVMCPDHPLAQ 180
PWI+ NI T +S V+I KII EID GLILDP++ QLDV+SF+EIPIGFVM PDH LA
Sbjct 121 PWISFNIHTHESKVIIQKIINTEIDFGLILDPIIHTQLDVLSFIEIPIGFVMSPDHVLAN 180
Query 181 HTHLTLSQTLDTRHIVPDQPLVIHDRVMAMYKKYHANPAQITLSNDIRLIQSMLKKNMGI 240
+ LTL+ T ++RHI+ D PL+IH+RVMAMYKK H P TL+NDIRL+ SMLK+NMGI
Sbjct 181 QSKLTLADTFESRHIMADAPLIIHERVMAMYKKQHIVPIHQTLTNDIRLMISMLKRNMGI 240
Query 241 ALLSYLDVYSAVEKQELIFIPLEDKTIQPLTLALCSGSRRQLSRIAQLLIRTLTEQME 298
A+LSYLDVY+AV +EL+F+P+ +K IQPLTLALC+G RRQLSRI+Q+LI+ L+++ME
Sbjct 241 AILSYLDVYTAVANKELVFVPIHEKGIQPLTLALCAGQRRQLSRISQILIQQLSQKME 298
>A0A3F3L899 LysR family transcriptional regulator [Acinetobacter
ursingii]
Length=308
Score = 421 bits (1083), Expect = 9e-153
Identities = 206/298 (69%), Positives = 257/298 (86%), Gaps = 0/298 (0%)
Query 1 MSIPFSRFSDYFMTVAKTGNLRKAADQLHISVSAVHRQIALAEEELDIALFERLPNGLKL 60
M++PFSRF++YF+ VA+T NL KAA+QL ISVSAVHRQIALAEE+LDIALFERLPNGLKL
Sbjct 1 MNVPFSRFAEYFLVVAETENLHKAAEQLFISVSAVHRQIALAEEQLDIALFERLPNGLKL 60
Query 61 TLAGEMLYSDVLRWQKEYKQTCMRFDEIQGLKRGAIELGLIAALSDGFVVDVLATLQSEF 120
TLAGE+LYSD+LRW+KE++QT +RFDEIQGLKRG+IELGLI+ALSDGFV++ LA LQ ++
Sbjct 61 TLAGELLYSDLLRWKKEFQQTRIRFDEIQGLKRGSIELGLISALSDGFVIESLADLQQQY 120
Query 121 PWITLNILTDDSDVLINKIITNEIDVGLILDPVVSAQLDVMSFVEIPIGFVMCPDHPLAQ 180
PWI+ NI T +S V+I KII EID GLILDP++ QL+V+SF+EIPIGFVM PDH LA
Sbjct 121 PWISFNIHTHESKVIIQKIINTEIDFGLILDPIIHTQLEVLSFIEIPIGFVMSPDHALAT 180
Query 181 HTHLTLSQTLDTRHIVPDQPLVIHDRVMAMYKKYHANPAQITLSNDIRLIQSMLKKNMGI 240
+ LTL+ T ++RHI+ D PL+IH+RVMAMYKK H P TL+NDIRL+ SMLK+NMGI
Sbjct 181 QSKLTLADTFESRHIMADAPLIIHERVMAMYKKQHIVPIHQTLTNDIRLMISMLKRNMGI 240
Query 241 ALLSYLDVYSAVEKQELIFIPLEDKTIQPLTLALCSGSRRQLSRIAQLLIRTLTEQME 298
A+LSYLDVY+AV +EL+F+P+ +K IQPLTLALC+G RRQLSRI+Q+LI+ L+ +ME
Sbjct 241 AILSYLDVYTAVANKELVFVPIHEKGIQPLTLALCAGQRRQLSRISQILIQQLSRKME 298
>N9C1H4 HTH lysR-type domain-containing protein [Acinetobacter
ursingii ANC 3649]
Length=308
Score = 421 bits (1083), Expect = 9e-153
Identities = 206/298 (69%), Positives = 257/298 (86%), Gaps = 0/298 (0%)
Query 1 MSIPFSRFSDYFMTVAKTGNLRKAADQLHISVSAVHRQIALAEEELDIALFERLPNGLKL 60
M++PFSRF++YF+ VA+T NL KAA+QL ISVSAVHRQIALAEE+LDIALFERLPNGLKL
Sbjct 1 MNVPFSRFAEYFLVVAETENLHKAAEQLFISVSAVHRQIALAEEQLDIALFERLPNGLKL 60
Query 61 TLAGEMLYSDVLRWQKEYKQTCMRFDEIQGLKRGAIELGLIAALSDGFVVDVLATLQSEF 120
TLAGE+LYSD+LRW+KE++QT +RFDEIQGLKRG+IELGLI+ALSDGFV++ LA LQ ++
Sbjct 61 TLAGELLYSDLLRWKKEFQQTRIRFDEIQGLKRGSIELGLISALSDGFVIESLADLQQQY 120
Query 121 PWITLNILTDDSDVLINKIITNEIDVGLILDPVVSAQLDVMSFVEIPIGFVMCPDHPLAQ 180
PWI+ NI T +S V+I KII EID GLILDP++ QL+V+SF+EIPIGFVM PDH LA
Sbjct 121 PWISFNIHTHESKVIIQKIINTEIDFGLILDPIIHTQLEVLSFIEIPIGFVMSPDHALAT 180
Query 181 HTHLTLSQTLDTRHIVPDQPLVIHDRVMAMYKKYHANPAQITLSNDIRLIQSMLKKNMGI 240
+ LTL+ T ++RHI+ D PL+IH+RVMAMYKK H P TL+NDIRL+ SMLK+NMGI
Sbjct 181 QSKLTLADTFESRHIMADAPLIIHERVMAMYKKQHIVPIHQTLTNDIRLMISMLKRNMGI 240
Query 241 ALLSYLDVYSAVEKQELIFIPLEDKTIQPLTLALCSGSRRQLSRIAQLLIRTLTEQME 298
A+LSYLDVY+AV +EL+F+P+ +K IQPLTLALC+G RRQLSRI+Q+LI+ L+ +ME
Sbjct 241 AILSYLDVYTAVANKELVFVPIHEKGIQPLTLALCAGQRRQLSRISQILIQQLSRKME 298
>A0A3A8F3C0 LysR family transcriptional regulator [Acinetobacter
guerrae]
Length=308
Score = 420 bits (1080), Expect = 3e-152
Identities = 205/298 (69%), Positives = 253/298 (85%), Gaps = 0/298 (0%)
Query 1 MSIPFSRFSDYFMTVAKTGNLRKAADQLHISVSAVHRQIALAEEELDIALFERLPNGLKL 60
M +PFSRF++YF+ VA+T NL KAA+QL ISVSAVHRQI LAEE+L IALFERLPNGLKL
Sbjct 1 MDVPFSRFAEYFLVVAETENLHKAAEQLFISVSAVHRQITLAEEQLGIALFERLPNGLKL 60
Query 61 TLAGEMLYSDVLRWQKEYKQTCMRFDEIQGLKRGAIELGLIAALSDGFVVDVLATLQSEF 120
TLAGE+LYSD+LRW+KE+ QT +RFDEIQGLKRG++ELGLI+ALS+GFV+D LA LQ ++
Sbjct 61 TLAGELLYSDLLRWKKEFNQTRIRFDEIQGLKRGSVELGLISALSEGFVIDTLADLQQQY 120
Query 121 PWITLNILTDDSDVLINKIITNEIDVGLILDPVVSAQLDVMSFVEIPIGFVMCPDHPLAQ 180
PWIT NI T +S V+I KII EID GLILDP++ AQL+V+SF+EIPIGFVM P H LA
Sbjct 121 PWITFNIHTHESKVIIQKIINTEIDFGLILDPLIHAQLEVLSFIEIPIGFVMSPKHELAT 180
Query 181 HTHLTLSQTLDTRHIVPDQPLVIHDRVMAMYKKYHANPAQITLSNDIRLIQSMLKKNMGI 240
H LTL+ T ++RHI+ D PL+IH+RV+AMYKK H P TL+NDIRL+ SMLK+NMG+
Sbjct 181 HAKLTLADTFESRHIIADAPLIIHERVIAMYKKQHIVPIHQTLTNDIRLMISMLKRNMGV 240
Query 241 ALLSYLDVYSAVEKQELIFIPLEDKTIQPLTLALCSGSRRQLSRIAQLLIRTLTEQME 298
A+LSYLDVY+AVE +EL+FIP+ +K IQPLTLALC+G RRQLSRI+Q+LI+ L+ ME
Sbjct 241 AILSYLDVYTAVENKELVFIPIYEKAIQPLTLALCAGQRRQLSRISQILIQQLSRNME 298
>A0A3R9C9S0 LysR family transcriptional regulator [Acinetobacter
sp. FDAARGOS_515]
Length=308
Score = 420 bits (1079), Expect = 4e-152
Identities = 205/298 (69%), Positives = 256/298 (86%), Gaps = 0/298 (0%)
Query 1 MSIPFSRFSDYFMTVAKTGNLRKAADQLHISVSAVHRQIALAEEELDIALFERLPNGLKL 60
M++PFSRF++YF+ VA+T NL KAA+QL ISVSAVHRQI LAEE+LDIALFERLPNGLKL
Sbjct 1 MNVPFSRFAEYFLVVAETENLHKAAEQLFISVSAVHRQITLAEEQLDIALFERLPNGLKL 60
Query 61 TLAGEMLYSDVLRWQKEYKQTCMRFDEIQGLKRGAIELGLIAALSDGFVVDVLATLQSEF 120
TLAGE+LYSD+LRW+KE++QT +RFDEIQGLKRG+IELGLI+ALSDGFV++ LA LQ ++
Sbjct 61 TLAGELLYSDLLRWKKEFQQTRIRFDEIQGLKRGSIELGLISALSDGFVIESLADLQQQY 120
Query 121 PWITLNILTDDSDVLINKIITNEIDVGLILDPVVSAQLDVMSFVEIPIGFVMCPDHPLAQ 180
PWI+ NI T +S V+I KII EID GLILDP++ QL+V+SF+EIPIGFVM PDH LA
Sbjct 121 PWISFNIHTHESKVIIQKIINTEIDFGLILDPIIHTQLEVLSFIEIPIGFVMSPDHALAT 180
Query 181 HTHLTLSQTLDTRHIVPDQPLVIHDRVMAMYKKYHANPAQITLSNDIRLIQSMLKKNMGI 240
+ LTL+ T ++RHI+ D PL+IH+RVMAMYKK H P TL+NDIRL+ SMLK+NMGI
Sbjct 181 QSKLTLADTFESRHIMADAPLIIHERVMAMYKKQHIVPIHQTLTNDIRLMISMLKRNMGI 240
Query 241 ALLSYLDVYSAVEKQELIFIPLEDKTIQPLTLALCSGSRRQLSRIAQLLIRTLTEQME 298
A+LSYLDVY+AV +EL+F+P+ +K IQPLTLALC+G RRQLSRI+Q+LI+ L+ +ME
Sbjct 241 AILSYLDVYTAVANKELVFVPIHEKGIQPLTLALCAGQRRQLSRISQILIQQLSRKME 298
>A0A1G6HG17 DNA-binding transcriptional regulator, LysR family
[Acinetobacter boissieri]
Length=301
Score = 387 bits (995), Expect = 2e-139
Identities = 185/298 (62%), Positives = 236/298 (79%), Gaps = 0/298 (0%)
Query 1 MSIPFSRFSDYFMTVAKTGNLRKAADQLHISVSAVHRQIALAEEELDIALFERLPNGLKL 60
M+IPFSRFS+YFM VA+TGNLR+AAD L ISVSAVHRQIALAEE L + LFERLP GLKL
Sbjct 1 MTIPFSRFSEYFMAVARTGNLRRAADLLFISVSAVHRQIALAEESLGVQLFERLPTGLKL 60
Query 61 TLAGEMLYSDVLRWQKEYKQTCMRFDEIQGLKRGAIELGLIAALSDGFVVDVLATLQSEF 120
TLAGEMLY+D+L+WQK+++QTC+RFDEIQGLKRG+I+ GLI ALSDG ++D + ++ +
Sbjct 61 TLAGEMLYADLLKWQKDFQQTCVRFDEIQGLKRGSIDFGLITALSDGLIIDAIDDMRQSY 120
Query 121 PWITLNILTDDSDVLINKIITNEIDVGLILDPVVSAQLDVMSFVEIPIGFVMCPDHPLAQ 180
PW+ NI D+SD + KI+ +ID GLILDP+ LDV+SFVE+P+GF+M P H LA
Sbjct 121 PWLNFNIKVDNSDAIAKKIVDADIDFGLILDPIQRTNLDVLSFVEMPLGFIMSPQHELAS 180
Query 181 HTHLTLSQTLDTRHIVPDQPLVIHDRVMAMYKKYHANPAQITLSNDIRLIQSMLKKNMGI 240
++LS T RHIV DQPLVIHDRV A+YK+ NP Q+T DIRL+ S+LKKNMGI
Sbjct 181 EEKISLSMTYHERHIVADQPLVIHDRVSAIYKRNQLNPKQVTTCTDIRLMLSLLKKNMGI 240
Query 241 ALLSYLDVYSAVEKQELIFIPLEDKTIQPLTLALCSGSRRQLSRIAQLLIRTLTEQME 298
++LSYLD YS +++ EL+FIPL +K +QPLT+ALC RRQLSR +Q+LI+ L ++E
Sbjct 241 SILSYLDAYSEIQRGELVFIPLREKGVQPLTVALCIAPRRQLSRASQILIQLLIAEIE 298
>A0A1Z9Z0T5 LysR family transcriptional regulator [Acinetobacter
populi]
Length=306
Score = 379 bits (972), Expect = 6e-136
Identities = 178/298 (60%), Positives = 240/298 (81%), Gaps = 0/298 (0%)
Query 1 MSIPFSRFSDYFMTVAKTGNLRKAADQLHISVSAVHRQIALAEEELDIALFERLPNGLKL 60
M+IPFSRFS+YF+ VAK G+LRKAAD L+ISVSAVHRQI LAEEEL + LFER+PNGLKL
Sbjct 1 MNIPFSRFSEYFLAVAKNGSLRKAADSLYISVSAVHRQIVLAEEELGVQLFERIPNGLKL 60
Query 61 TLAGEMLYSDVLRWQKEYKQTCMRFDEIQGLKRGAIELGLIAALSDGFVVDVLATLQSEF 120
TLAGE+LY+D+LRWQK++KQTC RFDEIQGLKRG+IE GLI ALS+GF+V+ +A + +F
Sbjct 61 TLAGELLYADILRWQKDFKQTCTRFDEIQGLKRGSIEFGLITALSEGFIVECIAEINEKF 120
Query 121 PWITLNILTDDSDVLINKIITNEIDVGLILDPVVSAQLDVMSFVEIPIGFVMCPDHPLAQ 180
PWI I DSD + KI+ EID GLILDP+ + LDV+SF+EIP+GFVM P+HPLAQ
Sbjct 121 PWINFQIQIHDSDRIAAKIVNTEIDFGLILDPLQHSHLDVISFMEIPLGFVMSPEHPLAQ 180
Query 181 HTHLTLSQTLDTRHIVPDQPLVIHDRVMAMYKKYHANPAQITLSNDIRLIQSMLKKNMGI 240
+ LS+T+D HI+ D PLVIHDRV ++YK++ P + T NDIR+I S+L++++GI
Sbjct 181 RDKIQLSETIDYHHIIADAPLVIHDRVTSIYKRHQFVPQRQTQCNDIRMISSLLQQHLGI 240
Query 241 ALLSYLDVYSAVEKQELIFIPLEDKTIQPLTLALCSGSRRQLSRIAQLLIRTLTEQME 298
+++ YLD Y+ +++++L FIP+ +K +QPLTLALC+ +RQ+SR AQ+++ + E+ME
Sbjct 241 SIMCYLDAYTLLQQKKLKFIPIHEKGVQPLTLALCTAPKRQVSRAAQIMMNQIIEKME 298
>A0A240EFI5 DNA-binding transcriptional regulator, LysR family
[Acinetobacter puyangensis]
Length=306
Score = 369 bits (948), Expect = 3e-132
Identities = 177/298 (59%), Positives = 236/298 (79%), Gaps = 0/298 (0%)
Query 1 MSIPFSRFSDYFMTVAKTGNLRKAADQLHISVSAVHRQIALAEEELDIALFERLPNGLKL 60
M+I FSRFS+YF+ VAK + RKAAD LHISVSAVHRQI LAEEEL + LFER+PNGLKL
Sbjct 1 MTIAFSRFSEYFLMVAKNESFRKAADHLHISVSAVHRQIVLAEEELGVQLFERIPNGLKL 60
Query 61 TLAGEMLYSDVLRWQKEYKQTCMRFDEIQGLKRGAIELGLIAALSDGFVVDVLATLQSEF 120
TLAGE+LY+D+LRWQK++KQT RFDEIQGLKRG+IE GLI ALS+GF+V+ +A + +F
Sbjct 61 TLAGELLYADILRWQKDFKQTRTRFDEIQGLKRGSIEFGLITALSEGFIVECIAEINEKF 120
Query 121 PWITLNILTDDSDVLINKIITNEIDVGLILDPVVSAQLDVMSFVEIPIGFVMCPDHPLAQ 180
PWI I DS+ + KI+ EID GLILDP+ + LDV+SF+EIP+GFV+ P+HPLAQ
Sbjct 121 PWINFQIQIHDSERIAAKIVNTEIDFGLILDPLQHSHLDVISFMEIPLGFVVSPEHPLAQ 180
Query 181 HTHLTLSQTLDTRHIVPDQPLVIHDRVMAMYKKYHANPAQITLSNDIRLIQSMLKKNMGI 240
+ LS+T+D HI+ D PLVIHDRV ++YK++ P + T NDIRLI S+L+KN GI
Sbjct 181 RDKIQLSETIDYHHIIADAPLVIHDRVTSIYKRHQFVPQRQTQCNDIRLICSLLQKNFGI 240
Query 241 ALLSYLDVYSAVEKQELIFIPLEDKTIQPLTLALCSGSRRQLSRIAQLLIRTLTEQME 298
A++ YLD Y+ +++++L FIP+++K +QPLTLALC+ +RQ+SR AQ+++ + E+ME
Sbjct 241 AIMCYLDAYTLLQQKKLKFIPIQEKGVQPLTLALCTAPKRQVSRAAQIMMNQIIERME 298
>A0A1J4NGT8 LysR family transcriptional regulator [Acinetobacter
sp. LCT-H3]
Length=309
Score = 369 bits (946), Expect = 6e-132
Identities = 182/298 (61%), Positives = 233/298 (78%), Gaps = 0/298 (0%)
Query 1 MSIPFSRFSDYFMTVAKTGNLRKAADQLHISVSAVHRQIALAEEELDIALFERLPNGLKL 60
M+ PFSRFSDYF+ VAK+G+LRKAADQL ISVSAVHRQIALAEEEL I LFERLPNGLKL
Sbjct 1 MNTPFSRFSDYFIAVAKSGSLRKAADQLFISVSAVHRQIALAEEELGIELFERLPNGLKL 60
Query 61 TLAGEMLYSDVLRWQKEYKQTCMRFDEIQGLKRGAIELGLIAALSDGFVVDVLATLQSEF 120
TLAGEMLY+D+L+WQKE++QTC+RFDEIQGLKRG+IE GLI+ALS+GFV+ L + +++
Sbjct 61 TLAGEMLYADILKWQKEFQQTCIRFDEIQGLKRGSIEFGLISALSEGFVMQSLQHMYAQY 120
Query 121 PWITLNILTDDSDVLINKIITNEIDVGLILDPVVSAQLDVMSFVEIPIGFVMCPDHPLAQ 180
PWI NI DS+V+ KII E+D GLIL+P QL+V+ F+E+P+GFVM HPLA+
Sbjct 121 PWINFNIRVADSEVIARKIIDTELDFGLILNPKAHHQLEVLHFLELPLGFVMSKQHPLAE 180
Query 181 HTHLTLSQTLDTRHIVPDQPLVIHDRVMAMYKKYHANPAQITLSNDIRLIQSMLKKNMGI 240
+ S TLD H + +PL+IHD V AMYK + PA+ T SNDIRL+ SM+K N GI
Sbjct 181 AERIYFSDTLDDNHFIAAEPLIIHDYVQAMYKHHKFIPARKTESNDIRLMNSMIKANTGI 240
Query 241 ALLSYLDVYSAVEKQELIFIPLEDKTIQPLTLALCSGSRRQLSRIAQLLIRTLTEQME 298
+LSYLDV+ +++ ELIF + +K ++PLTLALC +RQ+SR +QL+I+ + EQME
Sbjct 241 GILSYLDVFPELQRDELIFKLITEKGVRPLTLALCVAPKRQISRASQLMIKHIIEQME 298
>B6D1N3 Transcriptional regulator [Klebsiella pneumoniae]
Length=307
Score = 290 bits (743), Expect = 4e-101
Identities = 142/295 (48%), Positives = 205/295 (69%), Gaps = 0/295 (0%)
Query 4 PFSRFSDYFMTVAKTGNLRKAADQLHISVSAVHRQIALAEEELDIALFERLPNGLKLTLA 63
PFSRF+ YF+ VA+ G+LR+AA+QLHIS SA++RQI AEE LFERLP GL++T A
Sbjct 3 PFSRFAHYFIAVARCGSLRRAAEQLHISASAINRQILQAEEAFGTPLFERLPEGLRMTTA 62
Query 64 GEMLYSDVLRWQKEYKQTCMRFDEIQGLKRGAIELGLIAALSDGFVVDVLATLQSEFPWI 123
GE+LY ++LRWQKE++QT +FDE+QG+KRG++ +G++ AL++G LA + + +PW+
Sbjct 63 GELLYDNLLRWQKEFRQTRQKFDELQGMKRGSVSVGMVQALAEGGFAAALAEIIASWPWL 122
Query 124 TLNILTDDSDVLINKIITNEIDVGLILDPVVSAQLDVMSFVEIPIGFVMCPDHPLAQHTH 183
L++ DS + K+ ++DVGLILDP A L V++F E+ +G VM PDHPLA
Sbjct 123 ELDLQVADSHTVSQKVRQADLDVGLILDPQGQAGLSVLAFAELEVGIVMRPDHPLAGAKA 182
Query 184 LTLSQTLDTRHIVPDQPLVIHDRVMAMYKKYHANPAQITLSNDIRLIQSMLKKNMGIALL 243
L+L + RHIVP PL++H+RV +Y+ + P NDIRLI+S++ + G+ LL
Sbjct 183 LSLGELSLERHIVPGAPLIVHERVALLYRHHDFAPENTISCNDIRLIKSLVLRGSGVTLL 242
Query 244 SYLDVYSAVEKQELIFIPLEDKTIQPLTLALCSGSRRQLSRIAQLLIRTLTEQME 298
S LDV V++ +L F+PL ++PLTLALC+ RQLSR AQ+ I+TL+ +E
Sbjct 243 SLLDVLDEVQRGQLAFVPLRSTLLRPLTLALCTAPSRQLSRPAQMAIQTLSAVIE 297
>Q52868 Similarity to members of the LysR family [Rhizobium leguminosarum
bv. trifolii]
Length=300
Score = 127 bits (320), Expect = 5e-38
Identities = 79/258 (31%), Positives = 135/258 (52%), Gaps = 13/258 (5%)
Query 11 YFMTVAKTGNLRKAADQLHISVSAVHRQIALAEEELDIALFERLPNGLKLTLAGEMLYSD 70
Y VA+ G++RKAA LH++ SAV+R I EEEL +FERLP GLKLT +GE+L
Sbjct 9 YIDEVARQGSIRKAARTLHVAASAVNRYILELEEELQAPIFERLPRGLKLTSSGEILIQH 68
Query 71 VLRWQKEYKQTCMRFDEIQGLKRGAIELGLIAALSDGFVVDVLATLQSEFPWITLNILTD 130
+ + +++ + ++GL RG + L +A L+ G + +++A + E P ++L I+
Sbjct 69 IRETLQAHQRMRSQIQSLKGLNRGEVALATMATLAAGRIAEIVAAYREEHPQVSLRIMVG 128
Query 131 DSDVLINKIITNEIDVGLILDPVVSAQLDVMSFVEIPIGFVMCPDHPLAQHTHLTLSQTL 190
D + + + D+ + + +L + +G V+ P HPLA + +S L
Sbjct 129 DRTTVAEMVALGQADIAIAYNLPDDTRLQRAAEFHHALGAVVAPAHPLANRRTVRMSDCL 188
Query 191 DTRHIVPDQPLVIHDRVMAMYKKYHAN-PAQITL-----SNDIRLIQSMLKKNMGIALLS 244
PLV+ DR +++ + A PA+ TL +N + L++ + + I L+
Sbjct 189 -------LYPLVLADRSLSLREVVEATAPARATLVPVVETNSMELMKRLARTTPHITFLN 241
Query 245 YLDVYSAVEKQELIFIPL 262
LDV + +L+FIPL
Sbjct 242 RLDVDREMATGDLVFIPL 259
>Q6PSU0 CidR [Staphylococcus aureus]
Length=292
Score = 89.4 bits (220), Expect = 9e-24
Identities = 51/233 (22%), Positives = 111/233 (48%), Gaps = 0/233 (0%)
Query 11 YFMTVAKTGNLRKAADQLHISVSAVHRQIALAEEELDIALFERLPNGLKLTLAGEMLYSD 70
YF+ V K G + A+ L+I+ + + I E E+ LF+R L LT AG++ Y
Sbjct 8 YFIEVVKQGGMTNASKSLYIAQPTISKAIKDIENEMGTPLFDRSKRHLILTDAGQIFYEK 67
Query 71 VLRWQKEYKQTCMRFDEIQGLKRGAIELGLIAALSDGFVVDVLATLQSEFPWITLNILTD 130
Y + + GL+ G I +G+ A ++ ++++L ++P +T N++ +
Sbjct 68 SKEIVALYDYLPSEMERLNGLETGHINMGMSAVMNMKILINILGAFHQQYPNVTYNLIEN 127
Query 131 DSDVLINKIITNEIDVGLILDPVVSAQLDVMSFVEIPIGFVMCPDHPLAQHTHLTLSQTL 190
+ +II +E+D+G+ PV D + + + ++ +H LA++ + L
Sbjct 128 GGKTIEQQIINDEVDIGVTTLPVDHHIFDYTTLDKEDLRLIVSREHRLAKYETVKLEDLA 187
Query 191 DTRHIVPDQPLVIHDRVMAMYKKYHANPAQITLSNDIRLIQSMLKKNMGIALL 243
I+ ++ ++D+++ K P + + +I+ ++ +GI++L
Sbjct 188 GEDFILFNKDFYLNDKIIENAKNVGFVPNTVAQISQWHVIEDLVTNELGISIL 240
>Q32X76 Transcriptional regulator [Pseudomonas fluorescens]
Length=306
Score = 80.5 bits (197), Expect = 1e-20
Identities = 68/289 (24%), Positives = 129/289 (45%), Gaps = 7/289 (2%)
Query 11 YFMTVAKTGNLRKAADQLHISVSAVHRQIALAEEELDIALFERLPNGLKLTLAGEMLYSD 70
YF+ V + G++ +AA++L IS A+ +QI E+ LD++LFER L TLA LY+
Sbjct 8 YFVAVYEEGHIGRAAERLSISQPALSQQIRQLEQNLDVSLFERSSKRLLPTLAAHTLYNH 67
Query 71 VLRWQKEYKQTCMRFDEIQGLKRGAIELGLIAALSDGFVVDVLATLQSEFPWITLNILTD 130
L ++ +G + +G++ + V +L ++ P + + I
Sbjct 68 ALPLLDGLQRAREALGNFKGKALRTLAIGVLQTVHSSLVPQMLERVRKAQPHLVVQIYEL 127
Query 131 DSDVLINKIITNEIDVGLILDPVVSAQLDVMSFVEIPIGFVMCPDHPLAQHTHLTLSQTL 190
+ +++ +D+G+ P L + E + V+ DHPL + +++SQ
Sbjct 128 TGLEIERRLLNGSLDIGISYLPPRQPGLHGVQLYEDELTLVIPADHPLREFKKVSMSQAA 187
Query 191 DTRHIVPDQPLVIHDRVMAMYKKYHANP-AQITLSNDIRLIQSMLKKNMGIALLSYLDVY 249
+ ++ + + A P Q L+N ++ S+ + L
Sbjct 188 ELPMLLLGEEFQVRQIWQAQLASLGRRPQVQAELNNMAGILDSLPHTRLATVLPGRSQ-- 245
Query 250 SAVEKQELIFIPLEDKTIQPLTLAL-CSGSRRQLSRIAQLLIRTLTEQM 297
QEL++ PL + + PL + L C +RQ + +A L+RTL E++
Sbjct 246 KTHGDQELLWKPLSEPRV-PLKVGLVCRDVQRQQASLA--LLRTLLEEV 291
>H9ZYM9 Transcriptional regulator LysR family [Candidatus Thiodictyon
syntrophicum str. Cad16]
Length=326
Score = 80.1 bits (196), Expect = 2e-20
Identities = 50/171 (29%), Positives = 88/171 (51%), Gaps = 9/171 (5%)
Query 12 FMTVAKTGNLRKAADQLHISVSAVHRQIALAEEELDIALFERLPNGLKLTLAGEMLYSDV 71
F VA+ + +AA++LH+S AV Q+ EE + LFERL G+ LT AG +YS
Sbjct 11 FEAVARHLSYTRAAEELHLSQPAVSMQVRQLEEAAGLPLFERLGKGVGLTEAGREVYS-- 68
Query 72 LRWQKEYKQTCMRFDEI----QGLKRGAIELGLIAALSDGFVVDVLATLQSEFPWITLNI 127
+ + ++ DE+ +G+ RG + + +A+ + F +LA +P IT +
Sbjct 69 --YSRSINRSLQEMDEVMQSLKGVNRGRLHVA-VASTVNYFAPRLLAVFHQRYPGITPRL 125
Query 128 LTDDSDVLINKIITNEIDVGLILDPVVSAQLDVMSFVEIPIGFVMCPDHPL 178
+ + L+ + +N ID+ ++ P ++ SF+E P+ + P HPL
Sbjct 126 DVTNRETLMRLLDSNSIDIAVMGQPPTDIDVESESFMENPLVVIAPPTHPL 176
>P73862 Rubisco operon transcriptional regulator [Synechocystis
sp. (strain PCC 6803 / Kazusa)]
Length=316
Score = 79.0 bits (193), Expect = 6e-20
Identities = 64/297 (22%), Positives = 139/297 (47%), Gaps = 5/297 (2%)
Query 12 FMTVAKTGNLRKAADQLHISVSAVHRQIALAEEELDIALFERLPNGLKLTLAGEMLYSDV 71
F A+ G+ +AA++L+I+ V QI + + + LFE++ L LT AG+ L
Sbjct 11 FEATARHGSFTRAAEELYITQPTVSSQIKQLSKTVGLPLFEQIGKRLYLTEAGQELLVTC 70
Query 72 LRWQKEYKQTCMRFDEIQGLKRGAIELGLIAALSDGFVVDVLATLQSEFPWITLNILTDD 131
+ M+ +I+G K+G + L +I + F+ +L ++P I +++ +
Sbjct 71 QDIFQRLDNFAMKVADIKGTKQGRLRLAVITT-AKYFIPRLLGEFIQKYPGIEVSLKVTN 129
Query 132 SDVLINKIITNEIDVGLILDPVVSAQLDVMSFVEIPIGFVMCPDHPLAQHTHLTLSQTLD 191
+ + +++ NE D+ ++ +P L+ F++ P+ + DHPLA +++ ++ D
Sbjct 130 HEQIRHRMQNNEDDLYIVSEPPEEIDLNYQPFLDNPLVVIARRDHPLAGKSNIPITALND 189
Query 192 TRHIVPDQPLVIHDRVMAMYKKYHANPAQITLSNDIRLIQSMLKKNMGIALLSYLDVYSA 251
I+ ++ V ++ +++ + I+ + MGI++LS + S
Sbjct 190 EAFIMREKGSGTRLAVQNLFHRHYVDVRVRLELGSNEAIKQAIAGGMGISVLSQHTLVSE 249
Query 252 VEKQELIFIPLEDKTIQPLTLALCSGSRRQLSRIAQLL---IRTLTEQMEIKFNHAL 305
+ EL + +++ I+ + + + +QLS I Q + +T+ M F L
Sbjct 250 GARSELTILDIDEFPIK-RRWYVANLAGKQLSVITQTFLDYLMAVTKNMPAPFAEQL 305
>F6KXC4 LysR family transcriptional regulator [Streptomyces griseoluteus]
Length=303
Score = 74.7 bits (182), Expect = 2e-18
Identities = 49/179 (27%), Positives = 84/179 (47%), Gaps = 1/179 (1%)
Query 11 YFMTVAKTGNLRKAADQLHISVSAVHRQIALAEEELDIALFERLPNGLKLTLAGEMLYSD 70
YF+ VA+ N +AA+ +HIS + QI E +L L +R ++LT GE++ +
Sbjct 8 YFIAVAQEANFTRAAELVHISQPGISAQIRQLENDLGATLLDRSGRSVQLTAVGEVVLAH 67
Query 71 VLRWQKEYKQTCMRFDEIQGLKRGAIELGLIAALSDGFVVDVLATLQSEFPWITLNILTD 130
DE+ GL RG + +G++ A + + D L+ P + +++L D
Sbjct 68 AKSVLSSMDSLRQAVDEMNGLVRGKLVVGMVTACTVQPLFDALSGFHLAHPGVEISLLED 127
Query 131 DSDVLINKIITNEIDVGLI-LDPVVSAQLDVMSFVEIPIGFVMCPDHPLAQHTHLTLSQ 188
DS L + +D+ LI LD + PI + +HPLA+ +TL++
Sbjct 128 DSAKLGEYVREGTVDLALIGAAHRAPDDLDGWQVISEPIVAAVPHEHPLAEKDGVTLAE 186
>Q8KSC7 HTH-type transcriptional regulator CbbR [Methylorubrum
extorquens]
Length=329
Score = 74.3 bits (181), Expect = 3e-18
Identities = 62/257 (24%), Positives = 119/257 (46%), Gaps = 6/257 (2%)
Query 15 VAKTGNLRKAADQLHISVSAVHRQIALAEEELDIALFERLPNGLKLTLAG-EMLYSDVLR 73
VA+ G + +AA +L+++ +A++ +I EEE + LF+R P GLK T AG EML++ +
Sbjct 15 VARLGTMTRAAQELNVTSAALYARIRQLEEEAGLLLFDRTPTGLKPTDAGREMLWA--IN 72
Query 74 WQKEYKQTCM-RFDEIQGLKRGAIELGLIAALSDGFVVDVLATLQSEFPWITLNILTDDS 132
+TC R ++G G + LG+++ + F V+A P + +++ +
Sbjct 73 SINTVLETCTDRLRTLKGGGGGRVGLGVVST-AKYFAPLVIAGFMETHPKVEISLTVGNR 131
Query 133 DVLINKIITNEIDVGLILDPVVSAQLDVMSFVEIPIGFVMCPDHPLAQHTHLTLSQTLDT 192
I + +ID ++ P ++ +F P+ + PDHP+A LT + +
Sbjct 132 QDTIEALRNYDIDFAIMGRPPRDFAIEAETFGPHPLVLIAAPDHPMAGRRGLTRADLAEE 191
Query 193 RHIVPDQPLVIHDRVMAMYKKYHANPAQITL-SNDIRLIQSMLKKNMGIALLSYLDVYSA 251
+V ++ A++ + S ++ + +GIALLS V +
Sbjct 192 SFLVREEGSGTRSVFEEFMNGVMIRRAKLGIDSGSNETLKQAVMAGLGIALLSGHSVAAE 251
Query 252 VEKQELIFIPLEDKTIQ 268
V L+ + +E I+
Sbjct 252 VASGRLVLLDVEGLPIR 268
>O33748 CO2-concentrating mechanism regulator [Synechococcus sp.
(strain ATCC 27264 / PCC 7002 / PR-6)]
Length=311
Score = 73.6 bits (179), Expect = 4e-18
Identities = 80/306 (26%), Positives = 142/306 (46%), Gaps = 20/306 (7%)
Query 12 FMTVAKTGNLRKAADQLHISVSAVHRQIALAEEELDIALFERLPNGLKLTLAGEMLYSDV 71
F T A+ G+ KAA++L I+ V Q+ + + + LFE + L LT AGE L +
Sbjct 12 FETTARHGSFTKAAEELSITQPTVSGQVKQLTQTIGMPLFEHIGRKLYLTEAGEELLATC 71
Query 72 LRWQKEYKQTCMRFDEIQGLKRGAIELGLIAALSDGFVVDVLATLQSEFPWITLNILTDD 131
+ M+ +QG KRG + LG+I + FV +L ++P I +++ +
Sbjct 72 QEIFERLDNFEMKLAALQGAKRGQLRLGVITT-TKYFVPRILGEFCQDYPDIDVSLQVIN 130
Query 132 SDVLINKIITNEIDVGLILDPVVSAQLDVMSFVEIPIGFVMCPDHPLAQHTHLTLSQTLD 191
L +++ N D+ ++ + + +F++ P+ V DHPLA +L LS LD
Sbjct 131 HQQLHDRMADNLDDLYILSNLPDDLDVHAQAFLDNPLVVVARADHPLAHQKNLPLS-VLD 189
Query 192 -----TRHIVPDQPLVIHDRVMAMYKKYHANPAQITLS-NDIRLIQSMLKKNMGIALLSY 245
TR + L + ++++A H Q+ L I+ + +GI++LS
Sbjct 190 GADFVTREMGSGTRLAV-EKLLA----EHDVSVQVRLELGSNEAIKQAIAGGLGISVLSR 244
Query 246 LDVYSAVEKQELIFIPLEDKTIQ-PLTLALCSGSRRQLSRIAQ----LLIRTLTEQMEIK 300
+ + EL + +E IQ +A +G +QLS IAQ ++R+ + +E
Sbjct 245 HTLITEPPHGELTVLDVEHFPIQRHWYVAYLAG--KQLSVIAQAFLEFMVRSSQKTLENS 302
Query 301 FNHALA 306
+LA
Sbjct 303 GRRSLA 308
>Q6WW51 Putative transcriptional regulator [Pseudomonas fluorescens]
Length=309
Score = 72.8 bits (177), Expect = 7e-18
Identities = 66/287 (23%), Positives = 124/287 (43%), Gaps = 7/287 (2%)
Query 11 YFMTVAKTGNLRKAADQLHISVSAVHRQIALAEEELDIALFERLPNGLKLTLAGEMLYSD 70
YF+ V + G++ +AA++L IS A+ +QI E+ LD++LFER L TLA LY+
Sbjct 8 YFVAVYEEGHVGRAAERLSISQPALSQQIRQLEQNLDVSLFERSSKRLLPTLAAHTLYNH 67
Query 71 VLRWQKEYKQTCMRFDEIQGLKRGAIELGLIAALSDGFVVDVLATLQSEFPWITLNILTD 130
L +Q +G + +G++ + V +L ++ P + + I
Sbjct 68 ALPLLDGLQQAREALRNFKGQALRTLAIGVLQTVHTSLVPQMLERVRKAQPHLVVQIYEL 127
Query 131 DSDVLINKIITNEIDVGLILDPVVSAQLDVMSFVEIPIGFVMCPDHPLAQHTHLTLSQTL 190
+ +++ +D+G+ P L + E + V+ HPL + +++SQ
Sbjct 128 TGLEIERRLLNGSLDIGISYLPPRQPGLHGVPLYEDELTLVIPEQHPLREFKKVSMSQAA 187
Query 191 DTRHIVPDQPLVIHDRVMAMYKKYHANP-AQITLSNDIRLIQSMLKKNMGIALLSYLDVY 249
+ ++ + I A P Q L+N ++ S+ + L
Sbjct 188 ELPMLLLGEEFQIRQIWQAQLANLGRRPQVQAELNNMAGILDSLPHTRLATVLPGRSQQQ 247
Query 250 SAVEKQELIFIPLEDKTIQPLTLAL-CSGSRRQLSRIAQLLIRTLTE 295
+EL++ PL + + PL + L C +RQ + L+R+L E
Sbjct 248 HG--NKELLWKPLSEPRV-PLKVGLVCRDLQRQQGTLE--LLRSLLE 289
Lambda K H a alpha
0.326 0.139 0.399 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 1501522
Database: e17e037751546ba65cb6400c5bca96be.TrEMBL.fasta
Posted date: Jun 1, 2024 7:40 PM
Number of letters in database: 6,787
Number of sequences in database: 22
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
Loading
Data ...
