BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 21ec1ee3cb88b733445844931cf5980d.SwissProt.fasta
           1 sequences; 183 total letters



Query= ACIAD0516

Length=99
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q7VKZ1 Inner membrane-spanning protein YciB [Haemophilus ducreyi ...  31.2    9e-07


>Q7VKZ1 Inner membrane-spanning protein YciB [Haemophilus ducreyi 
(strain 35000HP / ATCC 700724)]
Length=183

 Score = 31.2 bits (69),  Expect = 9e-07
 Identities = 15/36 (42%), Positives = 26/36 (72%), Gaps = 1/36 (3%)

Query  48  ILATVLPIMALIVTIFMLPETAKWILGLQVLGFTVL  83
           +LAT+L ++ L+  +F   ET++WI+GL V+ F +L
Sbjct  30  VLATILQLI-LVRILFKKLETSQWIVGLSVIIFGIL  64



Lambda      K        H        a         alpha
   0.336    0.147    0.465    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 14112


  Database: 21ec1ee3cb88b733445844931cf5980d.SwissProt.fasta
    Posted date:  May 20, 2024  11:31 AM
  Number of letters in database: 183
  Number of sequences in database:  1



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40