Comparative Genomics

ACIAD0539 / SwissProt Alignments

BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: a5d94ca9bb217f849f18457b39d4ae73.SwissProt.fasta
           24 sequences; 16,854 total letters



Query= ACIAD0539

Length=205
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

A1JU33 Trans-aconitate 2-methyltransferase [Yersinia enterocoliti...  50.8    1e-10
P54458 Putative methyltransferase YqeM [Bacillus subtilis (strain...  49.3    4e-10
A4WAG4 Trans-aconitate 2-methyltransferase [Enterobacter sp. (str...  49.3    4e-10
A1K8U5 Trans-aconitate 2-methyltransferase [Azoarcus sp. (strain ...  48.9    5e-10
A1AB99 Trans-aconitate 2-methyltransferase [Escherichia coli O1:K...  48.1    1e-09
Q0THR9 Trans-aconitate 2-methyltransferase [Escherichia coli O6:K...  47.0    2e-09
B7N4U4 Trans-aconitate 2-methyltransferase [Escherichia coli O17:...  47.0    2e-09
Q1RBP8 Trans-aconitate 2-methyltransferase [Escherichia coli (str...  46.2    4e-09
Q8FHF2 Trans-aconitate 2-methyltransferase [Escherichia coli O6:H...  46.2    4e-09
B7MMY3 Trans-aconitate 2-methyltransferase [Escherichia coli O45:...  46.2    4e-09
B7URP6 Trans-aconitate 2-methyltransferase [Escherichia coli O127...  46.2    4e-09
B1LF96 Trans-aconitate 2-methyltransferase [Escherichia coli (str...  45.1    1e-08
Q8FZM5 Trans-aconitate 2-methyltransferase [Brucella suis biovar ...  45.1    1e-08
B0CHP1 Trans-aconitate 2-methyltransferase [Brucella suis (strain...  45.1    1e-08
A5VRJ7 Trans-aconitate 2-methyltransferase [Brucella ovis (strain...  45.1    1e-08
Q8YI91 Trans-aconitate 2-methyltransferase [Brucella melitensis b...  45.1    1e-08
A9M6C1 Trans-aconitate 2-methyltransferase [Brucella canis (strai...  45.1    1e-08
Q53514 Nodulation protein S [Rhizobium tropici]                       43.1    5e-08
P76145 Trans-aconitate 2-methyltransferase [Escherichia coli (str...  42.7    7e-08
P19441 Nodulation protein S [Sinorhizobium fredii (strain NBRC 10...  39.3    8e-07
Q008X5 Replicase polyprotein 1a [White bream virus (isolate Blicc...  37.7    5e-06
Q008X6 Replicase polyprotein 1ab [White bream virus (isolate Blic...  37.7    5e-06
Q02007 Nodulation protein S [Rhizobium fredii]                        35.0    2e-05
Q8N6F8 Methyltransferase-like protein 27 [Homo sapiens]               35.0    2e-05


>A1JU33 Trans-aconitate 2-methyltransferase [Yersinia enterocolitica 
serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)]
Length=258

 Score = 50.8 bits (120),  Expect = 1e-10
 Identities = 34/97 (35%), Positives = 51/97 (53%), Gaps = 7/97 (7%)

Query  49   KVLDLGCGSGTPIAKYLIEQ---GCQLTGVDTSEVMLDMAQQNFPEQIWINADIRQFSTE  105
            ++ DLGCG G   +  L+ Q     QL G+D S  ML  AQQ  P+ +++ ADIRQ+   
Sbjct  34   RISDLGCGPGN--STQLLHQRFPDAQLMGIDNSRAMLLSAQQRLPDCVFLEADIRQWQPA  91

Query  106  QTFDGILAWDSFFHLDPENQRQMFAQFSTHAASGGVL  142
            +  D I A  S   L   + +Q+F    +  A+ G+L
Sbjct  92   EPQDLIYANASLQWL--TDHQQLFPYLFSQLAANGIL  126


>P54458 Putative methyltransferase YqeM [Bacillus subtilis (strain 
168)]
Length=247

 Score = 49.3 bits (116),  Expect = 4e-10
 Identities = 41/145 (28%), Positives = 68/145 (47%), Gaps = 14/145 (10%)

Query  15   IYQKHGRDWTQLRGDFLHEKIWLDRFLGLLPMSAKVLDLGCGSGTPIAKYLIEQGCQLTG  74
            IYQ     + +L     +++ W       LP   ++LDL CG+G  I+  L E+G ++TG
Sbjct  2    IYQGFASVYDELMSHAPYDQ-WTKWIEASLPEKGRILDLACGTGE-ISIRLAEKGFEVTG  59

Query  75   VDTSEVMLDMAQQNFPEQ---IWINADIRQFSTEQTFDG-----ILAWDSFFHLDPENQ-  125
            +D SE ML  AQQ        +++  D+R+ +    FDG     ++  DS  +L  +N  
Sbjct  60   IDLSEEMLSFAQQKVSSSQPILFLQQDMREIT---GFDGQFDAVVICCDSLNYLKTKNDV  116

Query  126  RQMFAQFSTHAASGGVLMFTSGPSY  150
             + F          G+L+F    S+
Sbjct  117  IETFKSVFRVLKPEGILLFDVHSSF  141


>A4WAG4 Trans-aconitate 2-methyltransferase [Enterobacter sp. 
(strain 638)]
Length=252

 Score = 49.3 bits (116),  Expect = 4e-10
 Identities = 37/100 (37%), Positives = 50/100 (50%), Gaps = 9/100 (9%)

Query  15   IYQKHGRDWTQLRGDFLHEKIWLDRFLGLLPMSAKVLDLGCGSGTPIAKYLIEQG-CQLT  73
            +Y ++G + T+   + L  +I LD    LL       DLGCG G   A  L      ++T
Sbjct  8    LYLQYGAERTRPAAELL-ARIALDDVSDLL-------DLGCGPGNSTALLLKRWPLARIT  59

Query  74   GVDTSEVMLDMAQQNFPEQIWINADIRQFSTEQTFDGILA  113
            GVD S  ML+ A+   PE  +I AD+RQF  E   D I A
Sbjct  60   GVDNSPAMLEQARVAVPECRFIEADVRQFKPEHAVDLIYA  99


>A1K8U5 Trans-aconitate 2-methyltransferase [Azoarcus sp. (strain 
BH72)]
Length=253

 Score = 48.9 bits (115),  Expect = 5e-10
 Identities = 36/108 (33%), Positives = 55/108 (51%), Gaps = 5/108 (5%)

Query  47   SAKVLDLGCGSGTPIAKYLIEQGCQ--LTGVDTSEVMLDMAQQNFPEQIWINADIRQFST  104
            +A V+DLGCG G   A  L+E+  Q  + GVD+S  ML  A+Q  P+  W+ AD+R ++ 
Sbjct  32   AATVVDLGCGPGNSTA-LLVERWPQARVVGVDSSAEMLRSARQALPQVEWMQADLRAWAP  90

Query  105  EQTFDGILAWDSFFHLDPENQRQMFAQFSTHAASGGVLMFTSGPSYGE  152
                D I A ++     P++   +  +   H   GGVL      +Y E
Sbjct  91   AAPVDLIFA-NAVMQWLPDH-ATLLPELLRHLRPGGVLAIQMPRNYDE  136


>A1AB99 Trans-aconitate 2-methyltransferase [Escherichia coli 
O1:K1 / APEC]
Length=252

 Score = 48.1 bits (113),  Expect = 1e-09
 Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 5/67 (7%)

Query  50   VLDLGCGSGTPIAKYLIEQ---GCQLTGVDTSEVMLDMAQQNFPEQIWINADIRQFSTEQ  106
            + DLGCG+G   A  L+ Q     ++TG+D+S  M+  A+   P+ +++ ADIR +  EQ
Sbjct  35   IADLGCGTGNSTA--LLHQRWPAARITGIDSSPAMIAEARSALPDSLFVEADIRNWQPEQ  92

Query  107  TFDGILA  113
              D I A
Sbjct  93   ALDLIFA  99


>Q0THR9 Trans-aconitate 2-methyltransferase [Escherichia coli 
O6:K15:H31 (strain 536 / UPEC)]
Length=252

 Score = 47.0 bits (110),  Expect = 2e-09
 Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 5/67 (7%)

Query  50   VLDLGCGSGTPIAKYLIEQ---GCQLTGVDTSEVMLDMAQQNFPEQIWINADIRQFSTEQ  106
            + DLGCG G   A  L++Q     ++TG+D+S  M+  A+   P+ +++ ADIR +  EQ
Sbjct  35   IADLGCGPGNSTA--LLDQRWPAARITGIDSSPAMIAEARSALPDCLFVEADIRNWQPEQ  92

Query  107  TFDGILA  113
              D I A
Sbjct  93   ALDLIFA  99


>B7N4U4 Trans-aconitate 2-methyltransferase [Escherichia coli 
O17:K52:H18 (strain UMN026 / ExPEC)]
Length=252

 Score = 47.0 bits (110),  Expect = 2e-09
 Identities = 26/67 (39%), Positives = 39/67 (58%), Gaps = 5/67 (7%)

Query  50   VLDLGCGSGTPIAKYLIEQ---GCQLTGVDTSEVMLDMAQQNFPEQIWINADIRQFSTEQ  106
            V DLGCG G   A  L++Q     ++TG+D+S  M+  A+   P+ +++ ADIR +  EQ
Sbjct  35   VADLGCGPGNSTA--LLQQRWPAARITGIDSSPAMVAEARSALPDCLFVEADIRNWQPEQ  92

Query  107  TFDGILA  113
              D I A
Sbjct  93   ALDLIFA  99


>Q1RBP8 Trans-aconitate 2-methyltransferase [Escherichia coli 
(strain UTI89 / UPEC)]
Length=252

 Score = 46.2 bits (108),  Expect = 4e-09
 Identities = 25/67 (37%), Positives = 38/67 (57%), Gaps = 5/67 (7%)

Query  50   VLDLGCGSGTPIAKYLIEQ---GCQLTGVDTSEVMLDMAQQNFPEQIWINADIRQFSTEQ  106
            + DLGCG G   A  L+ Q     ++TG+D+S  M+  A+   P+ +++ ADIR +  EQ
Sbjct  35   IADLGCGPGNSTA--LLHQRWPAARITGIDSSPAMIAEARSALPDCLFVEADIRNWQPEQ  92

Query  107  TFDGILA  113
              D I A
Sbjct  93   ALDLIFA  99


>Q8FHF2 Trans-aconitate 2-methyltransferase [Escherichia coli 
O6:H1 (strain CFT073 / ATCC 700928 / UPEC)]
Length=252

 Score = 46.2 bits (108),  Expect = 4e-09
 Identities = 25/67 (37%), Positives = 38/67 (57%), Gaps = 5/67 (7%)

Query  50   VLDLGCGSGTPIAKYLIEQ---GCQLTGVDTSEVMLDMAQQNFPEQIWINADIRQFSTEQ  106
            + DLGCG G   A  L+ Q     ++TG+D+S  M+  A+   P+ +++ ADIR +  EQ
Sbjct  35   IADLGCGPGNSTA--LLHQRWPAARITGIDSSPAMIAEARSALPDCLFVEADIRNWQPEQ  92

Query  107  TFDGILA  113
              D I A
Sbjct  93   ALDLIFA  99


>B7MMY3 Trans-aconitate 2-methyltransferase [Escherichia coli 
O45:K1 (strain S88 / ExPEC)]
Length=252

 Score = 46.2 bits (108),  Expect = 4e-09
 Identities = 25/67 (37%), Positives = 38/67 (57%), Gaps = 5/67 (7%)

Query  50   VLDLGCGSGTPIAKYLIEQ---GCQLTGVDTSEVMLDMAQQNFPEQIWINADIRQFSTEQ  106
            + DLGCG G   A  L+ Q     ++TG+D+S  M+  A+   P+ +++ ADIR +  EQ
Sbjct  35   IADLGCGPGNSTA--LLHQRWPAARITGIDSSPAMIAEARSALPDCLFVEADIRNWQPEQ  92

Query  107  TFDGILA  113
              D I A
Sbjct  93   ALDLIFA  99


>B7URP6 Trans-aconitate 2-methyltransferase [Escherichia coli 
O127:H6 (strain E2348/69 / EPEC)]
Length=252

 Score = 46.2 bits (108),  Expect = 4e-09
 Identities = 25/67 (37%), Positives = 38/67 (57%), Gaps = 5/67 (7%)

Query  50   VLDLGCGSGTPIAKYLIEQ---GCQLTGVDTSEVMLDMAQQNFPEQIWINADIRQFSTEQ  106
            + DLGCG G   A  L+ Q     ++TG+D+S  M+  A+   P+ +++ ADIR +  EQ
Sbjct  35   IADLGCGPGNSTA--LLHQRWPAARITGIDSSPAMIAEARSALPDCLFVEADIRNWQPEQ  92

Query  107  TFDGILA  113
              D I A
Sbjct  93   ALDLIFA  99


>B1LF96 Trans-aconitate 2-methyltransferase [Escherichia coli 
(strain SMS-3-5 / SECEC)]
Length=252

 Score = 45.1 bits (105),  Expect = 1e-08
 Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 5/67 (7%)

Query  50   VLDLGCGSGTPIAKYLIEQ---GCQLTGVDTSEVMLDMAQQNFPEQIWINADIRQFSTEQ  106
            V DLGCG G   A  L+ Q     ++TGVD+S  M+  A+   P+  ++ ADIR +  EQ
Sbjct  35   VADLGCGPGNSTA--LLHQRWPAARITGVDSSPAMIAEARSALPDCQFVEADIRNWQPEQ  92

Query  107  TFDGILA  113
              D I A
Sbjct  93   ALDLIFA  99


>Q8FZM5 Trans-aconitate 2-methyltransferase [Brucella suis biovar 
1 (strain 1330)]
Length=255

 Score = 45.1 bits (105),  Expect = 1e-08
 Identities = 30/92 (33%), Positives = 51/92 (55%), Gaps = 6/92 (7%)

Query  41   LGLLPMSA--KVLDLGCGSGTPIAKYLIEQ--GCQLTGVDTSEVMLDMAQQNFPEQIWIN  96
            L  +P+SA  KV+D+GCG G    K L+E+    Q++G DTS  M+D A+ + P+  +  
Sbjct  24   LAQIPLSAPRKVVDIGCGPGNS-TKLLVERWPDAQISGFDTSPDMIDTAKTHLPDVEFFI  82

Query  97   ADIRQFSTEQTFDGILAWDSFFHLDPENQRQM  128
            +D   F  +   D +L  ++ F   P++  Q+
Sbjct  83   SDAASFEPDAETD-VLFSNAVFQWLPDHVEQL  113


>B0CHP1 Trans-aconitate 2-methyltransferase [Brucella suis (strain 
ATCC 23445 / NCTC 10510)]
Length=255

 Score = 45.1 bits (105),  Expect = 1e-08
 Identities = 30/92 (33%), Positives = 51/92 (55%), Gaps = 6/92 (7%)

Query  41   LGLLPMSA--KVLDLGCGSGTPIAKYLIEQ--GCQLTGVDTSEVMLDMAQQNFPEQIWIN  96
            L  +P+SA  KV+D+GCG G    K L+E+    Q++G DTS  M+D A+ + P+  +  
Sbjct  24   LAQIPLSAPRKVVDIGCGPGNS-TKLLVERWPDAQISGFDTSPDMIDTAKTHLPDVEFFI  82

Query  97   ADIRQFSTEQTFDGILAWDSFFHLDPENQRQM  128
            +D   F  +   D +L  ++ F   P++  Q+
Sbjct  83   SDAASFEPDAETD-VLFSNAVFQWLPDHVEQL  113


>A5VRJ7 Trans-aconitate 2-methyltransferase [Brucella ovis (strain 
ATCC 25840 / 63/290 / NCTC 10512)]
Length=255

 Score = 45.1 bits (105),  Expect = 1e-08
 Identities = 30/92 (33%), Positives = 51/92 (55%), Gaps = 6/92 (7%)

Query  41   LGLLPMSA--KVLDLGCGSGTPIAKYLIEQ--GCQLTGVDTSEVMLDMAQQNFPEQIWIN  96
            L  +P+SA  KV+D+GCG G    K L+E+    Q++G DTS  M+D A+ + P+  +  
Sbjct  24   LAQIPLSAPRKVVDIGCGPGNS-TKLLVERWPDAQISGFDTSPDMIDTAKTHLPDVEFFI  82

Query  97   ADIRQFSTEQTFDGILAWDSFFHLDPENQRQM  128
            +D   F  +   D +L  ++ F   P++  Q+
Sbjct  83   SDAASFEPDAETD-VLFSNAVFQWLPDHVEQL  113


>Q8YI91 Trans-aconitate 2-methyltransferase [Brucella melitensis 
biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)]
Length=255

 Score = 45.1 bits (105),  Expect = 1e-08
 Identities = 30/92 (33%), Positives = 51/92 (55%), Gaps = 6/92 (7%)

Query  41   LGLLPMSA--KVLDLGCGSGTPIAKYLIEQ--GCQLTGVDTSEVMLDMAQQNFPEQIWIN  96
            L  +P+SA  KV+D+GCG G    K L+E+    Q++G DTS  M+D A+ + P+  +  
Sbjct  24   LAQIPLSAPRKVVDIGCGPGNS-TKLLVERWPDAQISGFDTSPDMIDTAKTHLPDVEFFI  82

Query  97   ADIRQFSTEQTFDGILAWDSFFHLDPENQRQM  128
            +D   F  +   D +L  ++ F   P++  Q+
Sbjct  83   SDAASFEPDAETD-VLFSNAVFQWLPDHVEQL  113


>A9M6C1 Trans-aconitate 2-methyltransferase [Brucella canis (strain 
ATCC 23365 / NCTC 10854)]
Length=255

 Score = 45.1 bits (105),  Expect = 1e-08
 Identities = 30/92 (33%), Positives = 51/92 (55%), Gaps = 6/92 (7%)

Query  41   LGLLPMSA--KVLDLGCGSGTPIAKYLIEQ--GCQLTGVDTSEVMLDMAQQNFPEQIWIN  96
            L  +P+SA  KV+D+GCG G    K L+E+    Q++G DTS  M+D A+ + P+  +  
Sbjct  24   LAQIPLSAPRKVVDIGCGPGNS-TKLLVERWPDAQISGFDTSPDMIDTAKTHLPDVEFFI  82

Query  97   ADIRQFSTEQTFDGILAWDSFFHLDPENQRQM  128
            +D   F  +   D +L  ++ F   P++  Q+
Sbjct  83   SDAASFEPDAETD-VLFSNAVFQWLPDHVEQL  113


>Q53514 Nodulation protein S [Rhizobium tropici]
Length=238

 Score = 43.1 bits (100),  Expect = 5e-08
 Identities = 33/104 (32%), Positives = 52/104 (50%), Gaps = 7/104 (7%)

Query  48   AKVLDLGCGSGTPIAKYLIEQGCQ-LTGVDTSEVMLDMAQQ--NFPEQI-WINADIRQFS  103
            A  L++GC +G    K  +   CQ LT +D     +D  ++  N P  I W+ +D++QFS
Sbjct  82   ANALEVGCAAGAFTEK--LAPHCQRLTVIDVVPEAIDRTRRRMNKPAHISWVVSDVQQFS  139

Query  104  TEQTFDGILAWDSFFHL-DPENQRQMFAQFSTHAASGGVLMFTS  146
            +E+ FD I+  +  ++L D    R          A GG L+F S
Sbjct  140  SEELFDLIVVAEVLYYLGDIAEMRMAVGNLLRMLAPGGHLVFGS  183


>P76145 Trans-aconitate 2-methyltransferase [Escherichia coli 
(strain K12)]
Length=252

 Score = 42.7 bits (99),  Expect = 7e-08
 Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 5/67 (7%)

Query  50   VLDLGCGSGTPIAKYLIEQ---GCQLTGVDTSEVMLDMAQQNFPEQIWINADIRQFSTEQ  106
            V DLGCG G   A  L++Q     ++TG+D+S  M+  A+   P+  ++ ADIR +   Q
Sbjct  35   VADLGCGPGNSTA--LLQQRWPAARITGIDSSPAMIAEARSALPDCQFVEADIRNWQPVQ  92

Query  107  TFDGILA  113
              D I A
Sbjct  93   ALDLIFA  99


>P19441 Nodulation protein S [Sinorhizobium fredii (strain NBRC 
101917 / NGR234)]
Length=216

 Score = 39.3 bits (90),  Expect = 8e-07
 Identities = 25/74 (34%), Positives = 39/74 (53%), Gaps = 4/74 (5%)

Query  51   LDLGCGSGTPIAKYLIEQGCQLTGVDTSEVMLDMAQQNFPEQI---WINADIRQFSTEQT  107
            L++GC +G    K L     +LT +D     +   +Q   E     WI AD+RQFST+Q 
Sbjct  65   LEVGCAAGAFTEK-LAPYCKRLTVIDVVPRAIARTRQRMKESSHINWIVADVRQFSTQQL  123

Query  108  FDGILAWDSFFHLD  121
            FD I+  +  ++L+
Sbjct  124  FDLIVVAEVLYYLE  137


>Q008X5 Replicase polyprotein 1a [White bream virus (isolate Blicca 
bjoerkna L./Germany/DF24/00)]
Length=4555

 Score = 37.7 bits (86),  Expect = 5e-06
 Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 10/79 (13%)

Query  47    SAKVLDLGCGSGTPIAKYLIEQGCQLTGVDTSEVMLDMAQQNFPEQIWINADIRQ-----  101
             +A VLD+G G G    +Y +     +TG+DT+  ML +A QN PE + +   ++Q     
Sbjct  1422  NAVVLDIGYGKGNDGPRYAVRP-LTVTGIDTAARMLAIADQNKPENVTL---VKQGFFTH  1477

Query  102   -FSTEQTFDGILAWDSFFH  119
                T  T+  ++A++S  +
Sbjct  1478  ITKTSNTYTHVIAFNSLHY  1496


>Q008X6 Replicase polyprotein 1ab [White bream virus (isolate 
Blicca bjoerkna L./Germany/DF24/00)]
Length=6872

 Score = 37.7 bits (86),  Expect = 5e-06
 Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 10/79 (13%)

Query  47    SAKVLDLGCGSGTPIAKYLIEQGCQLTGVDTSEVMLDMAQQNFPEQIWINADIRQ-----  101
             +A VLD+G G G    +Y +     +TG+DT+  ML +A QN PE + +   ++Q     
Sbjct  1422  NAVVLDIGYGKGNDGPRYAVRP-LTVTGIDTAARMLAIADQNKPENVTL---VKQGFFTH  1477

Query  102   -FSTEQTFDGILAWDSFFH  119
                T  T+  ++A++S  +
Sbjct  1478  ITKTSNTYTHVIAFNSLHY  1496


>Q02007 Nodulation protein S [Rhizobium fredii]
Length=175

 Score = 35.0 bits (79),  Expect = 2e-05
 Identities = 19/54 (35%), Positives = 30/54 (56%), Gaps = 3/54 (6%)

Query  71   QLTGVDTSEVMLDMAQQNFPEQI---WINADIRQFSTEQTFDGILAWDSFFHLD  121
            +LT +D     +   +Q   E     WI AD+RQFST+Q FD I+  +  ++L+
Sbjct  43   RLTVIDVVPRAIARTRQRMKESSHINWIVADVRQFSTQQLFDLIVVAEVLYYLE  96


>Q8N6F8 Methyltransferase-like protein 27 [Homo sapiens]
Length=245

 Score = 35.0 bits (79),  Expect = 2e-05
 Identities = 27/71 (38%), Positives = 34/71 (48%), Gaps = 3/71 (4%)

Query  45   PMSAKVLDLGCGSGTPIAKYLIEQGCQLTGVDTSEVMLDMAQQNFPEQIWINADIRQF--  102
            P SA +LD+ CG+G   A+       QL GVD S  ML+ AQ     Q      + Q   
Sbjct  66   PHSALILDVACGTGLVAAELRAPGFLQLHGVDGSPGMLEQAQAPGLYQRLSLCTLGQEPL  125

Query  103  -STEQTFDGIL  112
             S E TFD +L
Sbjct  126  PSPEGTFDAVL  136



Lambda      K        H        a         alpha
   0.325    0.140    0.443    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 2407020


  Database: a5d94ca9bb217f849f18457b39d4ae73.SwissProt.fasta
    Posted date:  May 20, 2024  7:38 AM
  Number of letters in database: 16,854
  Number of sequences in database:  24



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40