BLASTP 2.12.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.


Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.



Database: 31e1d0854ab6bc5fe9044e9d7f7ca196.SwissProt.fasta
           6 sequences; 394 total letters



Query= ACIAD0555

Length=73
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Q8FF46 Protein IscX [Escherichia coli O6:H1 (strain CFT073 / ATCC...  86.7    4e-29
Q51384 Uncharacterized protein PA3808 [Pseudomonas aeruginosa (st...  85.1    2e-28
P0C0M1 Protein IscX [Shigella flexneri]                               83.6    7e-28
P0C0L9 Protein IscX [Escherichia coli (strain K12)]                   83.6    7e-28
P0C0M0 Protein IscX [Escherichia coli O157:H7]                        83.6    7e-28
P44668 Protein IscX [Haemophilus influenzae (strain ATCC 51907 / ...  79.7    2e-26


>Q8FF46 Protein IscX [Escherichia coli O6:H1 (strain CFT073 / 
ATCC 700928 / UPEC)]
Length=66

 Score = 86.7 bits (213),  Expect = 4e-29
 Identities = 35/64 (55%), Positives = 48/64 (75%), Gaps = 0/64 (0%)

Query  7   MGLRWTDTIDIAIELSEAHTDVDPQWIRFTDLHAWVCALPDFSDDPSKSTEGLLEAIQMA  66
           MGL+WTD+ +I   L +A+ D+DP+ +RFTD+H W+CAL DF DDP  S E +LEAI + 
Sbjct  1   MGLKWTDSREIGEALYDAYPDIDPKTVRFTDMHQWICALEDFDDDPQASNEKILEAILLV  60

Query  67  WIDE  70
           W+DE
Sbjct  61  WLDE  64


>Q51384 Uncharacterized protein PA3808 [Pseudomonas aeruginosa 
(strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 
12228 / 1C / PRS 101 / PAO1)]
Length=66

 Score = 85.1 bits (209),  Expect = 2e-28
 Identities = 36/64 (56%), Positives = 49/64 (77%), Gaps = 0/64 (0%)

Query  7   MGLRWTDTIDIAIELSEAHTDVDPQWIRFTDLHAWVCALPDFSDDPSKSTEGLLEAIQMA  66
           M L+WTD ++IAI+L E+  +VDP+++ F DL  WV  LP+FSDDP +S E +LEAIQ A
Sbjct  1   MSLKWTDVLEIAIQLDESKPEVDPRYVNFVDLRRWVVELPEFSDDPQRSGEKVLEAIQAA  60

Query  67  WIDE  70
           WI+E
Sbjct  61  WIEE  64


>P0C0M1 Protein IscX [Shigella flexneri]
Length=66

 Score = 83.6 bits (205),  Expect = 7e-28
 Identities = 34/64 (53%), Positives = 47/64 (73%), Gaps = 0/64 (0%)

Query  7   MGLRWTDTIDIAIELSEAHTDVDPQWIRFTDLHAWVCALPDFSDDPSKSTEGLLEAIQMA  66
           MGL+WTD+ +I   L +A+ D+DP+ +RFTD+H W+C L DF DDP  S E +LEAI + 
Sbjct  1   MGLKWTDSREIGEALYDAYPDLDPKTVRFTDMHQWICDLEDFDDDPQASNEKILEAILLV  60

Query  67  WIDE  70
           W+DE
Sbjct  61  WLDE  64


>P0C0L9 Protein IscX [Escherichia coli (strain K12)]
Length=66

 Score = 83.6 bits (205),  Expect = 7e-28
 Identities = 34/64 (53%), Positives = 47/64 (73%), Gaps = 0/64 (0%)

Query  7   MGLRWTDTIDIAIELSEAHTDVDPQWIRFTDLHAWVCALPDFSDDPSKSTEGLLEAIQMA  66
           MGL+WTD+ +I   L +A+ D+DP+ +RFTD+H W+C L DF DDP  S E +LEAI + 
Sbjct  1   MGLKWTDSREIGEALYDAYPDLDPKTVRFTDMHQWICDLEDFDDDPQASNEKILEAILLV  60

Query  67  WIDE  70
           W+DE
Sbjct  61  WLDE  64


>P0C0M0 Protein IscX [Escherichia coli O157:H7]
Length=66

 Score = 83.6 bits (205),  Expect = 7e-28
 Identities = 34/64 (53%), Positives = 47/64 (73%), Gaps = 0/64 (0%)

Query  7   MGLRWTDTIDIAIELSEAHTDVDPQWIRFTDLHAWVCALPDFSDDPSKSTEGLLEAIQMA  66
           MGL+WTD+ +I   L +A+ D+DP+ +RFTD+H W+C L DF DDP  S E +LEAI + 
Sbjct  1   MGLKWTDSREIGEALYDAYPDLDPKTVRFTDMHQWICDLEDFDDDPQASNEKILEAILLV  60

Query  67  WIDE  70
           W+DE
Sbjct  61  WLDE  64


>P44668 Protein IscX [Haemophilus influenzae (strain ATCC 51907 
/ DSM 11121 / KW20 / Rd)]
Length=64

 Score = 79.7 bits (195),  Expect = 2e-26
 Identities = 33/62 (53%), Positives = 46/62 (74%), Gaps = 0/62 (0%)

Query  9   LRWTDTIDIAIELSEAHTDVDPQWIRFTDLHAWVCALPDFSDDPSKSTEGLLEAIQMAWI  68
           ++WTD   IA EL + + D+DP+ +RFTDLH W+C L +F DDP+KS E +LEAI + W+
Sbjct  1   MKWTDAQLIAEELYDRNPDLDPKTVRFTDLHKWICELENFDDDPNKSNESILEAILLKWL  60

Query  69  DE  70
           DE
Sbjct  61  DE  62



Lambda      K        H        a         alpha
   0.328    0.139    0.465    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 16986


  Database: 31e1d0854ab6bc5fe9044e9d7f7ca196.SwissProt.fasta
    Posted date:  May 20, 2024  6:55 AM
  Number of letters in database: 394
  Number of sequences in database:  6



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40