BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: cb3ff236d1900474c6a52f891e0a82be.SwissProt.fasta
24 sequences; 9,228 total letters
Query= ACIAD0557
Length=415
Score E
Sequences producing significant alignments: (Bits) Value
Q6FEM6 Dual-specificity RNA methyltransferase RlmN [Acinetobacter... 822 0.0
A3M208 Dual-specificity RNA methyltransferase RlmN [Acinetobacter... 705 0.0
B0VKS2 Dual-specificity RNA methyltransferase RlmN [Acinetobacter... 705 0.0
B2I3E2 Dual-specificity RNA methyltransferase RlmN [Acinetobacter... 705 0.0
B7I5G4 Dual-specificity RNA methyltransferase RlmN [Acinetobacter... 705 0.0
B7H072 Dual-specificity RNA methyltransferase RlmN [Acinetobacter... 705 0.0
A5WGQ4 Dual-specificity RNA methyltransferase RlmN [Psychrobacter... 521 0.0
Q1QD22 Dual-specificity RNA methyltransferase RlmN [Psychrobacter... 511 0.0
Q4FTX0 Dual-specificity RNA methyltransferase RlmN [Psychrobacter... 508 0.0
A4XY35 Dual-specificity RNA methyltransferase RlmN [Pseudomonas m... 461 1e-165
Q02RW0 Dual-specificity RNA methyltransferase RlmN [Pseudomonas a... 456 2e-163
Q51385 Dual-specificity RNA methyltransferase RlmN [Pseudomonas a... 456 2e-163
A6V0V7 Dual-specificity RNA methyltransferase RlmN [Pseudomonas a... 454 6e-163
B1JDQ5 Dual-specificity RNA methyltransferase RlmN [Pseudomonas p... 451 2e-161
Q88PK0 Dual-specificity RNA methyltransferase RlmN [Pseudomonas p... 451 2e-161
B0KPI4 Dual-specificity RNA methyltransferase RlmN [Pseudomonas p... 451 2e-161
A5VYT2 Dual-specificity RNA methyltransferase RlmN [Pseudomonas p... 451 2e-161
P36979 Dual-specificity RNA methyltransferase RlmN [Escherichia c... 412 5e-146
A6QGB8 Probable dual-specificity RNA methyltransferase RlmN [Stap... 227 4e-74
Q6XK03 Probable dual-specificity RNA methyltransferase RlmN [Spir... 225 1e-73
O25970 Dual-specificity RNA methyltransferase RlmN [Helicobacter ... 192 1e-60
A2AXI2 Ribosomal RNA large subunit methyltransferase Cfr [Staphyl... 162 2e-49
A5HBL2 Ribosomal RNA large subunit methyltransferase Cfr [Staphyl... 162 2e-49
Q9FBG4 Ribosomal RNA large subunit methyltransferase Cfr [Mammali... 162 2e-49
>Q6FEM6 Dual-specificity RNA methyltransferase RlmN [Acinetobacter
baylyi (strain ATCC 33305 / BD413 / ADP1)]
Length=414
Score = 822 bits (2122), Expect = 0.0
Identities = 414/414 (100%), Positives = 414/414 (100%), Gaps = 0/414 (0%)
Query 1 MTSAVGISVPNTDAQSSQSASQTTVEQEVLKSKVNLLGMSRIELEQFFEQIGEKKFRAGQ 60
MTSAVGISVPNTDAQSSQSASQTTVEQEVLKSKVNLLGMSRIELEQFFEQIGEKKFRAGQ
Sbjct 1 MTSAVGISVPNTDAQSSQSASQTTVEQEVLKSKVNLLGMSRIELEQFFEQIGEKKFRAGQ 60
Query 61 IMKWIHQYFVTDLAEMTNISGKLRTKLEQVCEIKAPEVVHRHYSKDGTRKWVFRVGEGSG 120
IMKWIHQYFVTDLAEMTNISGKLRTKLEQVCEIKAPEVVHRHYSKDGTRKWVFRVGEGSG
Sbjct 61 IMKWIHQYFVTDLAEMTNISGKLRTKLEQVCEIKAPEVVHRHYSKDGTRKWVFRVGEGSG 120
Query 121 SLVETVLIPAEDKTGSRKTLCISSQVGCALDCSFCSTGKQGFQRDLTPAEIIGQLWVANQ 180
SLVETVLIPAEDKTGSRKTLCISSQVGCALDCSFCSTGKQGFQRDLTPAEIIGQLWVANQ
Sbjct 121 SLVETVLIPAEDKTGSRKTLCISSQVGCALDCSFCSTGKQGFQRDLTPAEIIGQLWVANQ 180
Query 181 SYVEDVPVAERTRAVTNVVMMGMGEPLLNFKPVVHSMSIMLDDYAYGMSKRRVTLSTSGV 240
SYVEDVPVAERTRAVTNVVMMGMGEPLLNFKPVVHSMSIMLDDYAYGMSKRRVTLSTSGV
Sbjct 181 SYVEDVPVAERTRAVTNVVMMGMGEPLLNFKPVVHSMSIMLDDYAYGMSKRRVTLSTSGV 240
Query 241 VPMIDKLAEELDVALAISLHAPNNPLRDELVPINKKYPLEQLIAAAQRYITKDGNESARK 300
VPMIDKLAEELDVALAISLHAPNNPLRDELVPINKKYPLEQLIAAAQRYITKDGNESARK
Sbjct 241 VPMIDKLAEELDVALAISLHAPNNPLRDELVPINKKYPLEQLIAAAQRYITKDGNESARK 300
Query 301 HVTIEYVMLDGVNDHPEHAQQLVKLLKNLPSKINLIPFNPFPHAPYGRSSRNRIMAFQKT 360
HVTIEYVMLDGVNDHPEHAQQLVKLLKNLPSKINLIPFNPFPHAPYGRSSRNRIMAFQKT
Sbjct 301 HVTIEYVMLDGVNDHPEHAQQLVKLLKNLPSKINLIPFNPFPHAPYGRSSRNRIMAFQKT 360
Query 361 LSDAGFVCTIRQTRGDDIDAACGQLVGQVADRTRRAEQWKKKVAERQEIIRSQG 414
LSDAGFVCTIRQTRGDDIDAACGQLVGQVADRTRRAEQWKKKVAERQEIIRSQG
Sbjct 361 LSDAGFVCTIRQTRGDDIDAACGQLVGQVADRTRRAEQWKKKVAERQEIIRSQG 414
>A3M208 Dual-specificity RNA methyltransferase RlmN [Acinetobacter
baumannii (strain ATCC 17978 / CIP 53.77 / LMG 1025 / NCDC
KC755 / 5377)]
Length=410
Score = 705 bits (1820), Expect = 0.0
Identities = 351/414 (85%), Positives = 380/414 (92%), Gaps = 4/414 (1%)
Query 1 MTSAVGISVPNTDAQSSQSASQTTVEQEVLKSKVNLLGMSRIELEQFFEQIGEKKFRAGQ 60
M+SAV +S N D Q S++ + E KVNLLGMSR ELE+FFE IGEKKFRAGQ
Sbjct 1 MSSAVVVSSENLDGQQQSSSTPASPAAE----KVNLLGMSRAELEKFFEDIGEKKFRAGQ 56
Query 61 IMKWIHQYFVTDLAEMTNISGKLRTKLEQVCEIKAPEVVHRHYSKDGTRKWVFRVGEGSG 120
+MKWIHQYFVTD AEMTNISGKLR KLEQ+CEIKAPEVVHRHYSKDGTRKWVFRVGEGSG
Sbjct 57 VMKWIHQYFVTDFAEMTNISGKLRAKLEQICEIKAPEVVHRHYSKDGTRKWVFRVGEGSG 116
Query 121 SLVETVLIPAEDKTGSRKTLCISSQVGCALDCSFCSTGKQGFQRDLTPAEIIGQLWVANQ 180
SLVETVLIPAEDKTGSRKTLCISSQVGCALDCSFCSTGKQGFQRDLTP EIIGQLW+AN
Sbjct 117 SLVETVLIPAEDKTGSRKTLCISSQVGCALDCSFCSTGKQGFQRDLTPDEIIGQLWMANY 176
Query 181 SYVEDVPVAERTRAVTNVVMMGMGEPLLNFKPVVHSMSIMLDDYAYGMSKRRVTLSTSGV 240
SY+E+VPVAER R+VTNVVMMGMGEPLLN+ V+ SM IMLDD+AYGMSKRRVTLSTSGV
Sbjct 177 SYMEEVPVAERERSVTNVVMMGMGEPLLNYDAVLSSMHIMLDDFAYGMSKRRVTLSTSGV 236
Query 241 VPMIDKLAEELDVALAISLHAPNNPLRDELVPINKKYPLEQLIAAAQRYITKDGNESARK 300
VP ID+LA+++DVALAISLHAPN+ LR+ELVPINKKYPL QLIAA QRYI KDGNESARK
Sbjct 237 VPKIDQLAKDIDVALAISLHAPNDELRNELVPINKKYPLAQLIAACQRYIAKDGNESARK 296
Query 301 HVTIEYVMLDGVNDHPEHAQQLVKLLKNLPSKINLIPFNPFPHAPYGRSSRNRIMAFQKT 360
HVTIEYVML+GVND PEHAQQL+KLLKNLPSKINLIPFNPFPHAPYGRSSRNRI++FQKT
Sbjct 297 HVTIEYVMLEGVNDQPEHAQQLLKLLKNLPSKINLIPFNPFPHAPYGRSSRNRIISFQKT 356
Query 361 LSDAGFVCTIRQTRGDDIDAACGQLVGQVADRTRRAEQWKKKVAERQEIIRSQG 414
LSDAGFVCTIRQTRGDDIDAACGQLVGQVADRTRRAEQW+KKVA+RQEI+R+QG
Sbjct 357 LSDAGFVCTIRQTRGDDIDAACGQLVGQVADRTRRAEQWQKKVAQRQEILRTQG 410
>B0VKS2 Dual-specificity RNA methyltransferase RlmN [Acinetobacter
baumannii (strain SDF)]
Length=410
Score = 705 bits (1820), Expect = 0.0
Identities = 351/414 (85%), Positives = 380/414 (92%), Gaps = 4/414 (1%)
Query 1 MTSAVGISVPNTDAQSSQSASQTTVEQEVLKSKVNLLGMSRIELEQFFEQIGEKKFRAGQ 60
M+SAV +S N D Q S++ + E KVNLLGMSR ELE+FFE IGEKKFRAGQ
Sbjct 1 MSSAVVVSSENLDGQQQSSSTPASPAAE----KVNLLGMSRAELEKFFEDIGEKKFRAGQ 56
Query 61 IMKWIHQYFVTDLAEMTNISGKLRTKLEQVCEIKAPEVVHRHYSKDGTRKWVFRVGEGSG 120
+MKWIHQYFVTD AEMTNISGKLR KLEQ+CEIKAPEVVHRHYSKDGTRKWVFRVGEGSG
Sbjct 57 VMKWIHQYFVTDFAEMTNISGKLRAKLEQICEIKAPEVVHRHYSKDGTRKWVFRVGEGSG 116
Query 121 SLVETVLIPAEDKTGSRKTLCISSQVGCALDCSFCSTGKQGFQRDLTPAEIIGQLWVANQ 180
SLVETVLIPAEDKTGSRKTLCISSQVGCALDCSFCSTGKQGFQRDLTP EIIGQLW+AN
Sbjct 117 SLVETVLIPAEDKTGSRKTLCISSQVGCALDCSFCSTGKQGFQRDLTPDEIIGQLWMANY 176
Query 181 SYVEDVPVAERTRAVTNVVMMGMGEPLLNFKPVVHSMSIMLDDYAYGMSKRRVTLSTSGV 240
SY+E+VPVAER R+VTNVVMMGMGEPLLN+ V+ SM IMLDD+AYGMSKRRVTLSTSGV
Sbjct 177 SYMEEVPVAERERSVTNVVMMGMGEPLLNYDAVLSSMHIMLDDFAYGMSKRRVTLSTSGV 236
Query 241 VPMIDKLAEELDVALAISLHAPNNPLRDELVPINKKYPLEQLIAAAQRYITKDGNESARK 300
VP ID+LA+++DVALAISLHAPN+ LR+ELVPINKKYPL QLIAA QRYI KDGNESARK
Sbjct 237 VPKIDQLAKDIDVALAISLHAPNDELRNELVPINKKYPLAQLIAACQRYIAKDGNESARK 296
Query 301 HVTIEYVMLDGVNDHPEHAQQLVKLLKNLPSKINLIPFNPFPHAPYGRSSRNRIMAFQKT 360
HVTIEYVML+GVND PEHAQQL+KLLKNLPSKINLIPFNPFPHAPYGRSSRNRI++FQKT
Sbjct 297 HVTIEYVMLEGVNDQPEHAQQLLKLLKNLPSKINLIPFNPFPHAPYGRSSRNRIISFQKT 356
Query 361 LSDAGFVCTIRQTRGDDIDAACGQLVGQVADRTRRAEQWKKKVAERQEIIRSQG 414
LSDAGFVCTIRQTRGDDIDAACGQLVGQVADRTRRAEQW+KKVA+RQEI+R+QG
Sbjct 357 LSDAGFVCTIRQTRGDDIDAACGQLVGQVADRTRRAEQWQKKVAQRQEILRTQG 410
>B2I3E2 Dual-specificity RNA methyltransferase RlmN [Acinetobacter
baumannii (strain ACICU)]
Length=410
Score = 705 bits (1820), Expect = 0.0
Identities = 351/414 (85%), Positives = 380/414 (92%), Gaps = 4/414 (1%)
Query 1 MTSAVGISVPNTDAQSSQSASQTTVEQEVLKSKVNLLGMSRIELEQFFEQIGEKKFRAGQ 60
M+SAV +S N D Q S++ + E KVNLLGMSR ELE+FFE IGEKKFRAGQ
Sbjct 1 MSSAVVVSSENLDGQQQSSSTPASPAAE----KVNLLGMSRAELEKFFEDIGEKKFRAGQ 56
Query 61 IMKWIHQYFVTDLAEMTNISGKLRTKLEQVCEIKAPEVVHRHYSKDGTRKWVFRVGEGSG 120
+MKWIHQYFVTD AEMTNISGKLR KLEQ+CEIKAPEVVHRHYSKDGTRKWVFRVGEGSG
Sbjct 57 VMKWIHQYFVTDFAEMTNISGKLRAKLEQICEIKAPEVVHRHYSKDGTRKWVFRVGEGSG 116
Query 121 SLVETVLIPAEDKTGSRKTLCISSQVGCALDCSFCSTGKQGFQRDLTPAEIIGQLWVANQ 180
SLVETVLIPAEDKTGSRKTLCISSQVGCALDCSFCSTGKQGFQRDLTP EIIGQLW+AN
Sbjct 117 SLVETVLIPAEDKTGSRKTLCISSQVGCALDCSFCSTGKQGFQRDLTPDEIIGQLWMANY 176
Query 181 SYVEDVPVAERTRAVTNVVMMGMGEPLLNFKPVVHSMSIMLDDYAYGMSKRRVTLSTSGV 240
SY+E+VPVAER R+VTNVVMMGMGEPLLN+ V+ SM IMLDD+AYGMSKRRVTLSTSGV
Sbjct 177 SYMEEVPVAERERSVTNVVMMGMGEPLLNYDAVLSSMHIMLDDFAYGMSKRRVTLSTSGV 236
Query 241 VPMIDKLAEELDVALAISLHAPNNPLRDELVPINKKYPLEQLIAAAQRYITKDGNESARK 300
VP ID+LA+++DVALAISLHAPN+ LR+ELVPINKKYPL QLIAA QRYI KDGNESARK
Sbjct 237 VPKIDQLAKDIDVALAISLHAPNDELRNELVPINKKYPLAQLIAACQRYIAKDGNESARK 296
Query 301 HVTIEYVMLDGVNDHPEHAQQLVKLLKNLPSKINLIPFNPFPHAPYGRSSRNRIMAFQKT 360
HVTIEYVML+GVND PEHAQQL+KLLKNLPSKINLIPFNPFPHAPYGRSSRNRI++FQKT
Sbjct 297 HVTIEYVMLEGVNDQPEHAQQLLKLLKNLPSKINLIPFNPFPHAPYGRSSRNRIISFQKT 356
Query 361 LSDAGFVCTIRQTRGDDIDAACGQLVGQVADRTRRAEQWKKKVAERQEIIRSQG 414
LSDAGFVCTIRQTRGDDIDAACGQLVGQVADRTRRAEQW+KKVA+RQEI+R+QG
Sbjct 357 LSDAGFVCTIRQTRGDDIDAACGQLVGQVADRTRRAEQWQKKVAQRQEILRTQG 410
>B7I5G4 Dual-specificity RNA methyltransferase RlmN [Acinetobacter
baumannii (strain AB0057)]
Length=410
Score = 705 bits (1820), Expect = 0.0
Identities = 351/414 (85%), Positives = 380/414 (92%), Gaps = 4/414 (1%)
Query 1 MTSAVGISVPNTDAQSSQSASQTTVEQEVLKSKVNLLGMSRIELEQFFEQIGEKKFRAGQ 60
M+SAV +S N D Q S++ + E KVNLLGMSR ELE+FFE IGEKKFRAGQ
Sbjct 1 MSSAVVVSSENLDGQQQSSSTPASPAAE----KVNLLGMSRAELEKFFEDIGEKKFRAGQ 56
Query 61 IMKWIHQYFVTDLAEMTNISGKLRTKLEQVCEIKAPEVVHRHYSKDGTRKWVFRVGEGSG 120
+MKWIHQYFVTD AEMTNISGKLR KLEQ+CEIKAPEVVHRHYSKDGTRKWVFRVGEGSG
Sbjct 57 VMKWIHQYFVTDFAEMTNISGKLRAKLEQICEIKAPEVVHRHYSKDGTRKWVFRVGEGSG 116
Query 121 SLVETVLIPAEDKTGSRKTLCISSQVGCALDCSFCSTGKQGFQRDLTPAEIIGQLWVANQ 180
SLVETVLIPAEDKTGSRKTLCISSQVGCALDCSFCSTGKQGFQRDLTP EIIGQLW+AN
Sbjct 117 SLVETVLIPAEDKTGSRKTLCISSQVGCALDCSFCSTGKQGFQRDLTPDEIIGQLWMANY 176
Query 181 SYVEDVPVAERTRAVTNVVMMGMGEPLLNFKPVVHSMSIMLDDYAYGMSKRRVTLSTSGV 240
SY+E+VPVAER R+VTNVVMMGMGEPLLN+ V+ SM IMLDD+AYGMSKRRVTLSTSGV
Sbjct 177 SYMEEVPVAERERSVTNVVMMGMGEPLLNYDAVLSSMHIMLDDFAYGMSKRRVTLSTSGV 236
Query 241 VPMIDKLAEELDVALAISLHAPNNPLRDELVPINKKYPLEQLIAAAQRYITKDGNESARK 300
VP ID+LA+++DVALAISLHAPN+ LR+ELVPINKKYPL QLIAA QRYI KDGNESARK
Sbjct 237 VPKIDQLAKDIDVALAISLHAPNDELRNELVPINKKYPLAQLIAACQRYIAKDGNESARK 296
Query 301 HVTIEYVMLDGVNDHPEHAQQLVKLLKNLPSKINLIPFNPFPHAPYGRSSRNRIMAFQKT 360
HVTIEYVML+GVND PEHAQQL+KLLKNLPSKINLIPFNPFPHAPYGRSSRNRI++FQKT
Sbjct 297 HVTIEYVMLEGVNDQPEHAQQLLKLLKNLPSKINLIPFNPFPHAPYGRSSRNRIISFQKT 356
Query 361 LSDAGFVCTIRQTRGDDIDAACGQLVGQVADRTRRAEQWKKKVAERQEIIRSQG 414
LSDAGFVCTIRQTRGDDIDAACGQLVGQVADRTRRAEQW+KKVA+RQEI+R+QG
Sbjct 357 LSDAGFVCTIRQTRGDDIDAACGQLVGQVADRTRRAEQWQKKVAQRQEILRTQG 410
>B7H072 Dual-specificity RNA methyltransferase RlmN [Acinetobacter
baumannii (strain AB307-0294)]
Length=410
Score = 705 bits (1820), Expect = 0.0
Identities = 351/414 (85%), Positives = 380/414 (92%), Gaps = 4/414 (1%)
Query 1 MTSAVGISVPNTDAQSSQSASQTTVEQEVLKSKVNLLGMSRIELEQFFEQIGEKKFRAGQ 60
M+SAV +S N D Q S++ + E KVNLLGMSR ELE+FFE IGEKKFRAGQ
Sbjct 1 MSSAVVVSSENLDGQQQSSSTPASPAAE----KVNLLGMSRAELEKFFEDIGEKKFRAGQ 56
Query 61 IMKWIHQYFVTDLAEMTNISGKLRTKLEQVCEIKAPEVVHRHYSKDGTRKWVFRVGEGSG 120
+MKWIHQYFVTD AEMTNISGKLR KLEQ+CEIKAPEVVHRHYSKDGTRKWVFRVGEGSG
Sbjct 57 VMKWIHQYFVTDFAEMTNISGKLRAKLEQICEIKAPEVVHRHYSKDGTRKWVFRVGEGSG 116
Query 121 SLVETVLIPAEDKTGSRKTLCISSQVGCALDCSFCSTGKQGFQRDLTPAEIIGQLWVANQ 180
SLVETVLIPAEDKTGSRKTLCISSQVGCALDCSFCSTGKQGFQRDLTP EIIGQLW+AN
Sbjct 117 SLVETVLIPAEDKTGSRKTLCISSQVGCALDCSFCSTGKQGFQRDLTPDEIIGQLWMANY 176
Query 181 SYVEDVPVAERTRAVTNVVMMGMGEPLLNFKPVVHSMSIMLDDYAYGMSKRRVTLSTSGV 240
SY+E+VPVAER R+VTNVVMMGMGEPLLN+ V+ SM IMLDD+AYGMSKRRVTLSTSGV
Sbjct 177 SYMEEVPVAERERSVTNVVMMGMGEPLLNYDAVLSSMHIMLDDFAYGMSKRRVTLSTSGV 236
Query 241 VPMIDKLAEELDVALAISLHAPNNPLRDELVPINKKYPLEQLIAAAQRYITKDGNESARK 300
VP ID+LA+++DVALAISLHAPN+ LR+ELVPINKKYPL QLIAA QRYI KDGNESARK
Sbjct 237 VPKIDQLAKDIDVALAISLHAPNDELRNELVPINKKYPLAQLIAACQRYIAKDGNESARK 296
Query 301 HVTIEYVMLDGVNDHPEHAQQLVKLLKNLPSKINLIPFNPFPHAPYGRSSRNRIMAFQKT 360
HVTIEYVML+GVND PEHAQQL+KLLKNLPSKINLIPFNPFPHAPYGRSSRNRI++FQKT
Sbjct 297 HVTIEYVMLEGVNDQPEHAQQLLKLLKNLPSKINLIPFNPFPHAPYGRSSRNRIISFQKT 356
Query 361 LSDAGFVCTIRQTRGDDIDAACGQLVGQVADRTRRAEQWKKKVAERQEIIRSQG 414
LSDAGFVCTIRQTRGDDIDAACGQLVGQVADRTRRAEQW+KKVA+RQEI+R+QG
Sbjct 357 LSDAGFVCTIRQTRGDDIDAACGQLVGQVADRTRRAEQWQKKVAQRQEILRTQG 410
>A5WGQ4 Dual-specificity RNA methyltransferase RlmN [Psychrobacter
sp. (strain PRwf-1)]
Length=403
Score = 521 bits (1341), Expect = 0.0
Identities = 264/376 (70%), Positives = 309/376 (82%), Gaps = 4/376 (1%)
Query 32 SKVNLLGMSRIELEQFFEQIGEKKFRAGQIMKWIHQYFVTDLAEMTNISGKLRTKLEQVC 91
+K N+LGM++ +L +F+ IGEK FRA Q+MKWI+Q+ VTD A+MTN+S LR KL +
Sbjct 22 TKTNILGMNQEQLGAYFKHIGEKPFRATQVMKWIYQHGVTDFAQMTNLSKGLREKLSEQA 81
Query 92 EIKAPEVVHRHYSKDGTRKWVFRVGEGSGSLVETVLIPAED-KTGSRKTLCISSQVGCAL 150
I+ PEV+H+ +S+DGTRKWVF+V GSLVETVLIPA+D K RKTLCISSQVGCAL
Sbjct 82 CIELPEVMHKEFSEDGTRKWVFKVA--GGSLVETVLIPADDSKVNGRKTLCISSQVGCAL 139
Query 151 DCSFCSTGKQGFQRDLTPAEIIGQLWVANQSYVEDVPVAERTRAVTNVVMMGMGEPLLNF 210
DCSFCSTGKQGF+RDLT AEIIGQLWVAN SY+E V E VTNVVMMGMGEPLLN+
Sbjct 140 DCSFCSTGKQGFERDLTAAEIIGQLWVANASYMEGVDSTEWQNNVTNVVMMGMGEPLLNY 199
Query 211 KPVVHSMSIMLDDYAYGMSKRRVTLSTSGVVPMIDKLAEELDVALAISLHAPNNPLRDEL 270
PVV SM +ML D+AYG+SKRRVTLSTSGVVP + +L +++DVALAISLHAPN+ LR+EL
Sbjct 200 TPVVSSMGLMLSDHAYGLSKRRVTLSTSGVVPKMYELYKDIDVALAISLHAPNDELRNEL 259
Query 271 VPINKKYPLEQLIAAAQRYITKDGNESARKHVTIEYVMLDGVNDHPEHAQQLVKLLKNLP 330
VPINKKYPL +LIAAA+ Y+ D N +KHVTIEYVML GVND EHAQQLV LL LP
Sbjct 260 VPINKKYPLSELIAAAKAYV-HDNNPRHKKHVTIEYVMLAGVNDSDEHAQQLVALLDGLP 318
Query 331 SKINLIPFNPFPHAPYGRSSRNRIMAFQKTLSDAGFVCTIRQTRGDDIDAACGQLVGQVA 390
SKINLIPFNPFPHAPY RSS NRI AF L++AGFVCTIRQTRGDDIDAACGQLVGQVA
Sbjct 319 SKINLIPFNPFPHAPYDRSSNNRIHAFSNILNNAGFVCTIRQTRGDDIDAACGQLVGQVA 378
Query 391 DRTRRAEQWKKKVAER 406
DRTRR+ +W++ + +R
Sbjct 379 DRTRRSAKWQQSIKQR 394
>Q1QD22 Dual-specificity RNA methyltransferase RlmN [Psychrobacter
cryohalolentis (strain ATCC BAA-1226 / DSM 17306 / VKM
B-2378 / K5)]
Length=413
Score = 511 bits (1316), Expect = 0.0
Identities = 266/405 (66%), Positives = 318/405 (79%), Gaps = 12/405 (3%)
Query 12 TDAQSSQSASQTTVEQ-EVLKSKVNLLGMSRIELEQFFEQIGEKKFRAGQIMKWIHQYFV 70
TD Q + + +++ + ++K NLLGM++ +L +F+ IGEK FR+ Q++KWI+Q V
Sbjct 10 TDVQHVPAKTTKSIKLVDEAQAKTNLLGMTQAQLADYFKSIGEKPFRSTQVIKWIYQQGV 69
Query 71 TDLAEMTNISGKLRTKLEQVCEIKAPEVVHRHYSKDGTRKWVFRVGEGSGSLVETVLIPA 130
TD +MTN+S LR KL + P+V+HR YS DGTRKWVF V GSLVETVLIPA
Sbjct 70 TDFEQMTNLSKSLRDKLSANACVIPPKVIHRQYSDDGTRKWVFEVT--GGSLVETVLIPA 127
Query 131 ED-KTGSRKTLCISSQVGCALDCSFCSTGKQGFQRDLTPAEIIGQLWVANQSYV------ 183
+D K RKTLC+SSQVGCALDCSFCSTGKQGF+RDLT AEI+GQLWVAN SY+
Sbjct 128 DDSKLNGRKTLCVSSQVGCALDCSFCSTGKQGFERDLTAAEILGQLWVANASYMTDENDS 187
Query 184 -EDVPVAERTRAVTNVVMMGMGEPLLNFKPVVHSMSIMLDDYAYGMSKRRVTLSTSGVVP 242
E+V + VTNVVMMGMGEPLLN++PVV SM +ML D+AYG+SKRRVTLSTSGVVP
Sbjct 188 LENVDHSLWENNVTNVVMMGMGEPLLNYRPVVSSMELMLSDHAYGLSKRRVTLSTSGVVP 247
Query 243 MIDKLAEELDVALAISLHAPNNPLRDELVPINKKYPLEQLIAAAQRYITKDGNESARKHV 302
+ +LA+ELDVALAISLHAPN+ LR+ELVPINKKYPLEQL+AAA+ Y+ D N +KHV
Sbjct 248 KMYELAQELDVALAISLHAPNDELRNELVPINKKYPLEQLMAAARNYVF-DVNPRHKKHV 306
Query 303 TIEYVMLDGVNDHPEHAQQLVKLLKNLPSKINLIPFNPFPHAPYGRSSRNRIMAFQKTLS 362
TIEYVMLDGVND EHA+QLV LL NLPSKINLIPFNPFPHA Y +SS NRI AF LS
Sbjct 307 TIEYVMLDGVNDSNEHAEQLVALLGNLPSKINLIPFNPFPHANYDKSSNNRIHAFSNILS 366
Query 363 DAGFVCTIRQTRGDDIDAACGQLVGQVADRTRRAEQWKKKVAERQ 407
+AGFVCTIRQTRGDDIDAACGQLVGQVADRTRR+ W++ + +R+
Sbjct 367 EAGFVCTIRQTRGDDIDAACGQLVGQVADRTRRSAAWQQSIKDRE 411
>Q4FTX0 Dual-specificity RNA methyltransferase RlmN [Psychrobacter
arcticus (strain DSM 17307 / VKM B-2377 / 273-4)]
Length=409
Score = 508 bits (1309), Expect = 0.0
Identities = 262/385 (68%), Positives = 308/385 (80%), Gaps = 11/385 (3%)
Query 31 KSKVNLLGMSRIELEQFFEQIGEKKFRAGQIMKWIHQYFVTDLAEMTNISGKLRTKLEQV 90
++K NLLGM++ +L +F+ IGEK FR+ Q++KWI+Q VTD +MTN+S LR KL
Sbjct 26 QAKTNLLGMTQAQLADYFKSIGEKPFRSTQVIKWIYQQGVTDFEQMTNLSKSLRDKLSAN 85
Query 91 CEIKAPEVVHRHYSKDGTRKWVFRVGEGSGSLVETVLIPAED-KTGSRKTLCISSQVGCA 149
+ P+V+HR YS DGTRKWVF V GSLVETVLIPA+D K RKTLCISSQVGCA
Sbjct 86 ACVIPPKVIHRQYSDDGTRKWVFEVT--GGSLVETVLIPADDSKLNGRKTLCISSQVGCA 143
Query 150 LDCSFCSTGKQGFQRDLTPAEIIGQLWVANQSYVED-------VPVAERTRAVTNVVMMG 202
LDCSFCSTGKQGF+RDLT AEI+GQLWVAN SY+ D + + VTNVVMMG
Sbjct 144 LDCSFCSTGKQGFERDLTAAEILGQLWVANASYMSDENDSLENIDHSLWENNVTNVVMMG 203
Query 203 MGEPLLNFKPVVHSMSIMLDDYAYGMSKRRVTLSTSGVVPMIDKLAEELDVALAISLHAP 262
MGEPLLN++PVV SM +ML D+AYG+SKRRVTLSTSGVVP + +LA+ELDVALAISLHAP
Sbjct 204 MGEPLLNYRPVVSSMELMLSDHAYGLSKRRVTLSTSGVVPKMYELAKELDVALAISLHAP 263
Query 263 NNPLRDELVPINKKYPLEQLIAAAQRYITKDGNESARKHVTIEYVMLDGVNDHPEHAQQL 322
N+ LR+ELVPINKKYPLEQL+AAA+ Y+ D N +KHVTIEYVMLDGVND EHA+QL
Sbjct 264 NDELRNELVPINKKYPLEQLMAAARNYVF-DVNPRHKKHVTIEYVMLDGVNDSNEHAEQL 322
Query 323 VKLLKNLPSKINLIPFNPFPHAPYGRSSRNRIMAFQKTLSDAGFVCTIRQTRGDDIDAAC 382
V LL +LPSKINLIPFNPFPHA Y +SS NRI AF LS+AGFVCTIRQTRGDDIDAAC
Sbjct 323 VALLGDLPSKINLIPFNPFPHANYDKSSNNRIHAFSNILSEAGFVCTIRQTRGDDIDAAC 382
Query 383 GQLVGQVADRTRRAEQWKKKVAERQ 407
GQLVGQVADRTRR+ W++ + +R+
Sbjct 383 GQLVGQVADRTRRSAAWQQSIKDRE 407
>A4XY35 Dual-specificity RNA methyltransferase RlmN [Pseudomonas
mendocina (strain ymp)]
Length=382
Score = 461 bits (1187), Expect = 1e-165
Identities = 241/375 (64%), Positives = 288/375 (77%), Gaps = 14/375 (4%)
Query 33 KVNLLGMSRIELEQFFEQIGEKKFRAGQIMKWIHQYFVTDLAEMTNISGKLRTKLEQVCE 92
K+NLLG+++ E+EQFFE IGEK+FRAGQ+MKWIH + V D A MTN+ LR KLE E
Sbjct 7 KINLLGLTQPEMEQFFESIGEKRFRAGQVMKWIHHFGVDDFAAMTNVGKALREKLEASAE 66
Query 93 IKAPEVVHRHYSKDGTRKWVFRVGEGSGSLVETVLIPAEDKTGSRKTLCISSQVGCALDC 152
I+ PEVV + S DGTRKWV RV SGS VETV IP R TLC+SSQ GCALDC
Sbjct 67 IRGPEVVSENISADGTRKWVVRVA--SGSCVETVYIPQN----GRGTLCVSSQAGCALDC 120
Query 153 SFCSTGKQGFQRDLTPAEIIGQLWVANQSYVEDVPVAERTRAVTNVVMMGMGEPLLNFKP 212
SFCSTGKQGF DLT AEIIGQ+W+AN+S+ VP A+ RA+TNVVMMGMGEPLLNF
Sbjct 121 SFCSTGKQGFNSDLTSAEIIGQVWIANKSF-GTVP-AKIDRAITNVVMMGMGEPLLNFDN 178
Query 213 VVHSMSIMLDDYAYGMSKRRVTLSTSGVVPMIDKLAEELDVALAISLHAPNNPLRDELVP 272
VV +M IM+DD YG+SKR+VTLSTSGVVPMIDKLAE +DV+LA+SLHAPN+ LR++LVP
Sbjct 179 VVSAMQIMMDDLGYGISKRKVTLSTSGVVPMIDKLAEVIDVSLALSLHAPNDELRNQLVP 238
Query 273 INKKYPLEQLIAAAQRYITKDGNESARKHVTIEYVMLDGVNDHPEHAQQLVKLLKNLPSK 332
INKKYPL+ L+AA +RY+ K G ++ +TIEY +L GVND PEHA+Q++ LL ++P K
Sbjct 239 INKKYPLDMLLAACKRYVAKLGE---KRVLTIEYTLLKGVNDQPEHAEQMIALLADVPCK 295
Query 333 INLIPFNPFPHAPYGRSSRNRIMAFQKTLSDAGFVCTIRQTRGDDIDAACGQLVGQVADR 392
INLIPFNPFP + Y R S N I FQ L AG T+R TRGDDIDAACGQLVGQV DR
Sbjct 296 INLIPFNPFPFSGYERPSNNAIRRFQDLLHKAGHNVTVRTTRGDDIDAACGQLVGQVMDR 355
Query 393 TRRAEQWKKKVAERQ 407
TRR+E++ +A RQ
Sbjct 356 TRRSERY---IAVRQ 367
>Q02RW0 Dual-specificity RNA methyltransferase RlmN [Pseudomonas
aeruginosa (strain UCBPP-PA14)]
Length=379
Score = 456 bits (1172), Expect = 2e-163
Identities = 237/375 (63%), Positives = 287/375 (77%), Gaps = 14/375 (4%)
Query 33 KVNLLGMSRIELEQFFEQIGEKKFRAGQIMKWIHQYFVTDLAEMTNISGKLRTKLEQVCE 92
KVNLLG+++ +LEQFFE IGEK+FRAGQ+MKWIH + V D MTN+ LR KL+ E
Sbjct 8 KVNLLGLTQPQLEQFFESIGEKRFRAGQVMKWIHHFGVDDFDAMTNVGKALREKLKASAE 67
Query 93 IKAPEVVHRHYSKDGTRKWVFRVGEGSGSLVETVLIPAEDKTGSRKTLCISSQVGCALDC 152
I+ PE+V + S DGTRKWV RV SGS VETV IP G R TLC+SSQ GCALDC
Sbjct 68 IRGPEIVSQDISADGTRKWVVRVA--SGSCVETVYIPQ----GGRGTLCVSSQAGCALDC 121
Query 153 SFCSTGKQGFQRDLTPAEIIGQLWVANQSYVEDVPVAERTRAVTNVVMMGMGEPLLNFKP 212
SFCSTGKQGF DLT AE+IGQ+W+AN+S+ VP A+ RA+TNVVMMGMGEPLLNF
Sbjct 122 SFCSTGKQGFNSDLTAAEVIGQVWIANKSF-GTVP-AKIDRAITNVVMMGMGEPLLNFDN 179
Query 213 VVHSMSIMLDDYAYGMSKRRVTLSTSGVVPMIDKLAEELDVALAISLHAPNNPLRDELVP 272
VV +M+IM+DD YG+SKR+VTLSTSGVVPMIDKL E +DV+LA+SLHAPN+ LR++LVP
Sbjct 180 VVAAMNIMMDDLGYGISKRKVTLSTSGVVPMIDKLGEVIDVSLALSLHAPNDELRNKLVP 239
Query 273 INKKYPLEQLIAAAQRYITKDGNESARKHVTIEYVMLDGVNDHPEHAQQLVKLLKNLPSK 332
INKKYPL L+ A +RYI++ G ++ +T+EY +L VND PEHA+Q++ LLK+ P K
Sbjct 240 INKKYPLGMLLDACRRYISRLGE---KRVLTVEYTLLKDVNDQPEHAEQMIALLKDTPCK 296
Query 333 INLIPFNPFPHAPYGRSSRNRIMAFQKTLSDAGFVCTIRQTRGDDIDAACGQLVGQVADR 392
INLIPFNPFPH+ Y R S N I FQ L GF T+R TRGDDIDAACGQLVGQV DR
Sbjct 297 INLIPFNPFPHSGYERPSNNAIRRFQDMLHKGGFNVTVRTTRGDDIDAACGQLVGQVMDR 356
Query 393 TRRAEQWKKKVAERQ 407
TRR+E++ +A RQ
Sbjct 357 TRRSERY---IAVRQ 368
>Q51385 Dual-specificity RNA methyltransferase RlmN [Pseudomonas
aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 /
JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)]
Length=379
Score = 456 bits (1172), Expect = 2e-163
Identities = 237/375 (63%), Positives = 287/375 (77%), Gaps = 14/375 (4%)
Query 33 KVNLLGMSRIELEQFFEQIGEKKFRAGQIMKWIHQYFVTDLAEMTNISGKLRTKLEQVCE 92
KVNLLG+++ +LEQFFE IGEK+FRAGQ+MKWIH + V D MTN+ LR KL+ E
Sbjct 8 KVNLLGLTQPQLEQFFESIGEKRFRAGQVMKWIHHFGVDDFDAMTNVGKALREKLKASAE 67
Query 93 IKAPEVVHRHYSKDGTRKWVFRVGEGSGSLVETVLIPAEDKTGSRKTLCISSQVGCALDC 152
I+ PE+V + S DGTRKWV RV SGS VETV IP G R TLC+SSQ GCALDC
Sbjct 68 IRGPEIVSQDISADGTRKWVVRVA--SGSCVETVYIPQ----GGRGTLCVSSQAGCALDC 121
Query 153 SFCSTGKQGFQRDLTPAEIIGQLWVANQSYVEDVPVAERTRAVTNVVMMGMGEPLLNFKP 212
SFCSTGKQGF DLT AE+IGQ+W+AN+S+ VP A+ RA+TNVVMMGMGEPLLNF
Sbjct 122 SFCSTGKQGFNSDLTAAEVIGQVWIANKSF-GTVP-AKIDRAITNVVMMGMGEPLLNFDN 179
Query 213 VVHSMSIMLDDYAYGMSKRRVTLSTSGVVPMIDKLAEELDVALAISLHAPNNPLRDELVP 272
VV +M+IM+DD YG+SKR+VTLSTSGVVPMIDKL E +DV+LA+SLHAPN+ LR++LVP
Sbjct 180 VVAAMNIMMDDLGYGISKRKVTLSTSGVVPMIDKLGEVIDVSLALSLHAPNDELRNKLVP 239
Query 273 INKKYPLEQLIAAAQRYITKDGNESARKHVTIEYVMLDGVNDHPEHAQQLVKLLKNLPSK 332
INKKYPL L+ A +RYI++ G ++ +T+EY +L VND PEHA+Q++ LLK+ P K
Sbjct 240 INKKYPLGMLLDACRRYISRLGE---KRVLTVEYTLLKDVNDQPEHAEQMIALLKDTPCK 296
Query 333 INLIPFNPFPHAPYGRSSRNRIMAFQKTLSDAGFVCTIRQTRGDDIDAACGQLVGQVADR 392
INLIPFNPFPH+ Y R S N I FQ L GF T+R TRGDDIDAACGQLVGQV DR
Sbjct 297 INLIPFNPFPHSGYERPSNNAIRRFQDMLHKGGFNVTVRTTRGDDIDAACGQLVGQVMDR 356
Query 393 TRRAEQWKKKVAERQ 407
TRR+E++ +A RQ
Sbjct 357 TRRSERY---IAVRQ 368
>A6V0V7 Dual-specificity RNA methyltransferase RlmN [Pseudomonas
aeruginosa (strain PA7)]
Length=378
Score = 454 bits (1169), Expect = 6e-163
Identities = 236/375 (63%), Positives = 286/375 (76%), Gaps = 14/375 (4%)
Query 33 KVNLLGMSRIELEQFFEQIGEKKFRAGQIMKWIHQYFVTDLAEMTNISGKLRTKLEQVCE 92
KVNLLG+++ +LEQFFE IGEK+FRAGQ+MKWIH + V D MTN+ LR KL+ E
Sbjct 7 KVNLLGLTQPQLEQFFESIGEKRFRAGQVMKWIHHFGVDDFDAMTNVGKALREKLKAFAE 66
Query 93 IKAPEVVHRHYSKDGTRKWVFRVGEGSGSLVETVLIPAEDKTGSRKTLCISSQVGCALDC 152
I+ PE+V + S DGTRKWV RV SGS VETV IP G R TLC+SSQ GCALDC
Sbjct 67 IRGPEIVSQDISADGTRKWVVRVA--SGSCVETVYIPQ----GGRGTLCVSSQAGCALDC 120
Query 153 SFCSTGKQGFQRDLTPAEIIGQLWVANQSYVEDVPVAERTRAVTNVVMMGMGEPLLNFKP 212
SFCSTGKQGF DL+ AE+IGQ+W+AN+S+ VP A+ RA+TNVVMMGMGEPLLNF
Sbjct 121 SFCSTGKQGFNSDLSAAEVIGQVWIANKSF-GTVP-AKIDRAITNVVMMGMGEPLLNFDN 178
Query 213 VVHSMSIMLDDYAYGMSKRRVTLSTSGVVPMIDKLAEELDVALAISLHAPNNPLRDELVP 272
VV +M+IM+DD YG+SKR+VTLSTSGVVPMIDKL E +DV+LA+SLHAPN+ LR+ LVP
Sbjct 179 VVAAMNIMMDDLGYGISKRKVTLSTSGVVPMIDKLGEVIDVSLALSLHAPNDELRNRLVP 238
Query 273 INKKYPLEQLIAAAQRYITKDGNESARKHVTIEYVMLDGVNDHPEHAQQLVKLLKNLPSK 332
INKKYPL L+ A +RYI++ G ++ +T+EY +L VND PEHA+Q++ LLK+ P K
Sbjct 239 INKKYPLTMLLDACRRYISRLGE---KRVLTVEYTLLKDVNDQPEHAEQMIALLKDTPCK 295
Query 333 INLIPFNPFPHAPYGRSSRNRIMAFQKTLSDAGFVCTIRQTRGDDIDAACGQLVGQVADR 392
INLIPFNPFPH+ Y R S N I FQ L GF T+R TRGDDIDAACGQLVGQV DR
Sbjct 296 INLIPFNPFPHSGYERPSNNAIRRFQDLLHKGGFNVTVRTTRGDDIDAACGQLVGQVMDR 355
Query 393 TRRAEQWKKKVAERQ 407
TRR+E++ +A RQ
Sbjct 356 TRRSERY---IAVRQ 367
>B1JDQ5 Dual-specificity RNA methyltransferase RlmN [Pseudomonas
putida (strain W619)]
Length=381
Score = 451 bits (1160), Expect = 2e-161
Identities = 233/375 (62%), Positives = 286/375 (76%), Gaps = 14/375 (4%)
Query 33 KVNLLGMSRIELEQFFEQIGEKKFRAGQIMKWIHQYFVTDLAEMTNISGKLRTKLEQVCE 92
K+NLLG+++ E+EQFF+ IGEK+FRAGQ+MKWIH + V D A MTN+ LR KLE V E
Sbjct 7 KINLLGLTQPEMEQFFDSIGEKRFRAGQVMKWIHHFGVDDFAAMTNVGKALREKLEAVAE 66
Query 93 IKAPEVVHRHYSKDGTRKWVFRVGEGSGSLVETVLIPAEDKTGSRKTLCISSQVGCALDC 152
I+ PEVV S DGTRKWV RV SGS VETV IP +D R TLC+SSQ GCALDC
Sbjct 67 IRPPEVVSEDISADGTRKWVIRVA--SGSCVETVYIPTDD----RGTLCVSSQAGCALDC 120
Query 153 SFCSTGKQGFQRDLTPAEIIGQLWVANQSYVEDVPVAERTRAVTNVVMMGMGEPLLNFKP 212
SFCSTGKQGF +LT AE+IGQ+W+AN+S+ VP A+ RA+TNVVMMGMGEPLLNF
Sbjct 121 SFCSTGKQGFNSNLTAAEVIGQVWLANKSF-GTVP-AKIDRAITNVVMMGMGEPLLNFDN 178
Query 213 VVHSMSIMLDDYAYGMSKRRVTLSTSGVVPMIDKLAEELDVALAISLHAPNNPLRDELVP 272
V+ +M IM+DD YG+SKRRVTLSTSGVVPMID+LA+ +DV+LA+SLHAPN+ LR++LVP
Sbjct 179 VIAAMKIMMDDLGYGISKRRVTLSTSGVVPMIDELAKHIDVSLALSLHAPNDELRNQLVP 238
Query 273 INKKYPLEQLIAAAQRYITKDGNESARKHVTIEYVMLDGVNDHPEHAQQLVKLLKNLPSK 332
INKKYPL+ L+ + Y+ G ++ +T+EY +L VND PEHA Q+++LL+++P K
Sbjct 239 INKKYPLKMLLESCMGYMATLG---GKRVLTVEYTLLKDVNDQPEHAAQMIELLRDVPCK 295
Query 333 INLIPFNPFPHAPYGRSSRNRIMAFQKTLSDAGFVCTIRQTRGDDIDAACGQLVGQVADR 392
INLIPFNPFPH+ Y R S N I FQ L GF T R TRGDDIDAACGQLVGQV DR
Sbjct 296 INLIPFNPFPHSGYERPSNNAIRRFQDLLHHGGFNVTTRTTRGDDIDAACGQLVGQVNDR 355
Query 393 TRRAEQWKKKVAERQ 407
TRR+E++ +A RQ
Sbjct 356 TRRSERY---IAVRQ 367
>Q88PK0 Dual-specificity RNA methyltransferase RlmN [Pseudomonas
putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB
11950 / KT2440)]
Length=381
Score = 451 bits (1159), Expect = 2e-161
Identities = 233/375 (62%), Positives = 288/375 (77%), Gaps = 14/375 (4%)
Query 33 KVNLLGMSRIELEQFFEQIGEKKFRAGQIMKWIHQYFVTDLAEMTNISGKLRTKLEQVCE 92
K+NLLG+++ E+EQFF+ IGEK+FRAGQ+MKWIH + V+D A MTN+ LR KLE V E
Sbjct 7 KINLLGLTQPEMEQFFDSIGEKRFRAGQVMKWIHHFGVSDFAAMTNVGKVLREKLEAVAE 66
Query 93 IKAPEVVHRHYSKDGTRKWVFRVGEGSGSLVETVLIPAEDKTGSRKTLCISSQVGCALDC 152
I+ PEVV S DGTRKWV RV SGS VETV IP +D R TLC+SSQ GCALDC
Sbjct 67 IRPPEVVSEDISADGTRKWVIRVA--SGSCVETVYIPTDD----RGTLCVSSQAGCALDC 120
Query 153 SFCSTGKQGFQRDLTPAEIIGQLWVANQSYVEDVPVAERTRAVTNVVMMGMGEPLLNFKP 212
SFCSTGKQGF +LT AE+IGQ+W+AN+S+ VP A+ RA+TNVVMMGMGEPLLNF
Sbjct 121 SFCSTGKQGFNSNLTAAEVIGQVWLANKSF-GTVP-AKVDRAITNVVMMGMGEPLLNFDN 178
Query 213 VVHSMSIMLDDYAYGMSKRRVTLSTSGVVPMIDKLAEELDVALAISLHAPNNPLRDELVP 272
V+ +M IM+DD YG+SKRRVTLSTSGVVPMID+LA+ +DV+LA+SLHAPN+ LR++LVP
Sbjct 179 VIAAMKIMMDDLGYGISKRRVTLSTSGVVPMIDELAKHIDVSLALSLHAPNDELRNKLVP 238
Query 273 INKKYPLEQLIAAAQRYITKDGNESARKHVTIEYVMLDGVNDHPEHAQQLVKLLKNLPSK 332
INKKYPL+ L+ + Y++ G ++ +T+EY +L VND PEHA Q+++LL+++P K
Sbjct 239 INKKYPLKVLLESCMGYMSTLG---GKRVLTVEYTLLKDVNDQPEHAAQMIELLRDVPCK 295
Query 333 INLIPFNPFPHAPYGRSSRNRIMAFQKTLSDAGFVCTIRQTRGDDIDAACGQLVGQVADR 392
INLIPFNPFPH+ Y R S N I FQ L GF T R TRGDDIDAACGQLVGQV DR
Sbjct 296 INLIPFNPFPHSGYERPSNNAIRRFQDLLHHGGFNVTTRTTRGDDIDAACGQLVGQVNDR 355
Query 393 TRRAEQWKKKVAERQ 407
TRR+E++ +A RQ
Sbjct 356 TRRSERY---IAVRQ 367
>B0KPI4 Dual-specificity RNA methyltransferase RlmN [Pseudomonas
putida (strain GB-1)]
Length=381
Score = 451 bits (1159), Expect = 2e-161
Identities = 233/375 (62%), Positives = 288/375 (77%), Gaps = 14/375 (4%)
Query 33 KVNLLGMSRIELEQFFEQIGEKKFRAGQIMKWIHQYFVTDLAEMTNISGKLRTKLEQVCE 92
K+NLLG+++ E+EQFF+ IGEK+FRAGQ+MKWIH + V+D A MTN+ LR KLE V E
Sbjct 7 KINLLGLTQPEMEQFFDSIGEKRFRAGQVMKWIHHFGVSDFAAMTNVGKVLREKLEAVAE 66
Query 93 IKAPEVVHRHYSKDGTRKWVFRVGEGSGSLVETVLIPAEDKTGSRKTLCISSQVGCALDC 152
I+ PEVV S DGTRKWV RV SGS VETV IP +D R TLC+SSQ GCALDC
Sbjct 67 IRPPEVVSEDISADGTRKWVIRVA--SGSCVETVYIPTDD----RGTLCVSSQAGCALDC 120
Query 153 SFCSTGKQGFQRDLTPAEIIGQLWVANQSYVEDVPVAERTRAVTNVVMMGMGEPLLNFKP 212
SFCSTGKQGF +LT AE+IGQ+W+AN+S+ VP A+ RA+TNVVMMGMGEPLLNF
Sbjct 121 SFCSTGKQGFNSNLTAAEVIGQVWLANKSF-GTVP-AKVDRAITNVVMMGMGEPLLNFDN 178
Query 213 VVHSMSIMLDDYAYGMSKRRVTLSTSGVVPMIDKLAEELDVALAISLHAPNNPLRDELVP 272
V+ +M IM+DD YG+SKRRVTLSTSGVVPMID+LA+ +DV+LA+SLHAPN+ LR++LVP
Sbjct 179 VIAAMKIMMDDLGYGISKRRVTLSTSGVVPMIDELAKHIDVSLALSLHAPNDELRNKLVP 238
Query 273 INKKYPLEQLIAAAQRYITKDGNESARKHVTIEYVMLDGVNDHPEHAQQLVKLLKNLPSK 332
INKKYPL+ L+ + Y++ G ++ +T+EY +L VND PEHA Q+++LL+++P K
Sbjct 239 INKKYPLKVLLESCMGYMSTLG---GKRVLTVEYTLLKDVNDQPEHAAQMIELLRDVPCK 295
Query 333 INLIPFNPFPHAPYGRSSRNRIMAFQKTLSDAGFVCTIRQTRGDDIDAACGQLVGQVADR 392
INLIPFNPFPH+ Y R S N I FQ L GF T R TRGDDIDAACGQLVGQV DR
Sbjct 296 INLIPFNPFPHSGYERPSNNAIRRFQDLLHHGGFNVTTRTTRGDDIDAACGQLVGQVNDR 355
Query 393 TRRAEQWKKKVAERQ 407
TRR+E++ +A RQ
Sbjct 356 TRRSERY---IAVRQ 367
>A5VYT2 Dual-specificity RNA methyltransferase RlmN [Pseudomonas
putida (strain ATCC 700007 / DSM 6899 / BCRC 17059 / F1)]
Length=381
Score = 451 bits (1159), Expect = 2e-161
Identities = 233/375 (62%), Positives = 288/375 (77%), Gaps = 14/375 (4%)
Query 33 KVNLLGMSRIELEQFFEQIGEKKFRAGQIMKWIHQYFVTDLAEMTNISGKLRTKLEQVCE 92
K+NLLG+++ E+EQFF+ IGEK+FRAGQ+MKWIH + V+D A MTN+ LR KLE V E
Sbjct 7 KINLLGLTQPEMEQFFDSIGEKRFRAGQVMKWIHHFGVSDFAAMTNVGKVLREKLEAVAE 66
Query 93 IKAPEVVHRHYSKDGTRKWVFRVGEGSGSLVETVLIPAEDKTGSRKTLCISSQVGCALDC 152
I+ PEVV S DGTRKWV RV SGS VETV IP +D R TLC+SSQ GCALDC
Sbjct 67 IRPPEVVSEDISADGTRKWVIRVA--SGSCVETVYIPTDD----RGTLCVSSQAGCALDC 120
Query 153 SFCSTGKQGFQRDLTPAEIIGQLWVANQSYVEDVPVAERTRAVTNVVMMGMGEPLLNFKP 212
SFCSTGKQGF +LT AE+IGQ+W+AN+S+ VP A+ RA+TNVVMMGMGEPLLNF
Sbjct 121 SFCSTGKQGFNSNLTAAEVIGQVWLANKSF-GTVP-AKVDRAITNVVMMGMGEPLLNFDN 178
Query 213 VVHSMSIMLDDYAYGMSKRRVTLSTSGVVPMIDKLAEELDVALAISLHAPNNPLRDELVP 272
V+ +M IM+DD YG+SKRRVTLSTSGVVPMID+LA+ +DV+LA+SLHAPN+ LR++LVP
Sbjct 179 VIAAMKIMMDDLGYGISKRRVTLSTSGVVPMIDELAKHIDVSLALSLHAPNDELRNKLVP 238
Query 273 INKKYPLEQLIAAAQRYITKDGNESARKHVTIEYVMLDGVNDHPEHAQQLVKLLKNLPSK 332
INKKYPL+ L+ + Y++ G ++ +T+EY +L VND PEHA Q+++LL+++P K
Sbjct 239 INKKYPLKVLLESCMGYMSTLG---GKRVLTVEYTLLKDVNDQPEHAAQMIELLRDVPCK 295
Query 333 INLIPFNPFPHAPYGRSSRNRIMAFQKTLSDAGFVCTIRQTRGDDIDAACGQLVGQVADR 392
INLIPFNPFPH+ Y R S N I FQ L GF T R TRGDDIDAACGQLVGQV DR
Sbjct 296 INLIPFNPFPHSGYERPSNNAIRRFQDLLHHGGFNVTTRTTRGDDIDAACGQLVGQVNDR 355
Query 393 TRRAEQWKKKVAERQ 407
TRR+E++ +A RQ
Sbjct 356 TRRSERY---IAVRQ 367
>P36979 Dual-specificity RNA methyltransferase RlmN [Escherichia
coli (strain K12)]
Length=384
Score = 412 bits (1058), Expect = 5e-146
Identities = 213/363 (59%), Positives = 262/363 (72%), Gaps = 11/363 (3%)
Query 33 KVNLLGMSRIELEQFFEQIGEKKFRAGQIMKWIHQYFVTDLAEMTNISGKLRTKLEQVCE 92
K+NLL ++R ++ +FF+ +GEK FRA Q+MKW++ Y + EMT+I+ LR KL++V E
Sbjct 17 KINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE 76
Query 93 IKAPEVVHRHYSKDGTRKWVFRVGEGSGSLVETVLIPAEDKTGSRKTLCISSQVGCALDC 152
I+APEVV S DGT KW VG+ VETV IP +D R TLC+SSQVGCAL+C
Sbjct 77 IRAPEVVEEQRSSDGTIKWAIAVGD---QRVETVYIPEDD----RATLCVSSQVGCALEC 129
Query 153 SFCSTGKQGFQRDLTPAEIIGQLWVANQSYVEDVPVAERTRAVTNVVMMGMGEPLLNFKP 212
FCST +QGF R+L +EIIGQ+W A + + R +TNVVMMGMGEPLLN
Sbjct 130 KFCSTAQQGFNRNLRVSEIIGQVWRAAK--IVGAAKVTGQRPITNVVMMGMGEPLLNLNN 187
Query 213 VVHSMSIMLDDYAYGMSKRRVTLSTSGVVPMIDKLAEELDVALAISLHAPNNPLRDELVP 272
VV +M IMLDD+ +G+SKRRVTLSTSGVVP +DKL + +DVALAISLHAPN+ +RDE+VP
Sbjct 188 VVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVP 247
Query 273 INKKYPLEQLIAAAQRYITKDGNESARKHVTIEYVMLDGVNDHPEHAQQLVKLLKNLPSK 332
INKKY +E +AA +RY+ K R VTIEYVMLD VND EHA QL +LLK+ P K
Sbjct 248 INKKYNIETFLAAVRRYLEKSNANQGR--VTIEYVMLDHVNDGTEHAHQLAELLKDTPCK 305
Query 333 INLIPFNPFPHAPYGRSSRNRIMAFQKTLSDAGFVCTIRQTRGDDIDAACGQLVGQVADR 392
INLIP+NPFP APYGRSS +RI F K L GF +R+TRGDDIDAACGQL G V DR
Sbjct 306 INLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDR 365
Query 393 TRR 395
T+R
Sbjct 366 TKR 368
>A6QGB8 Probable dual-specificity RNA methyltransferase RlmN [Staphylococcus
aureus (strain Newman)]
Length=364
Score = 227 bits (579), Expect = 4e-74
Identities = 126/344 (37%), Positives = 201/344 (58%), Gaps = 18/344 (5%)
Query 43 ELEQFFEQIGEKKFRAGQIMKWIHQYFVTDLAEMTNISGKLRTKLEQVCEIKAPEVVHRH 102
E++ + + G++KFRA QI +W++Q V + EMTN+S LR L+ + V +
Sbjct 28 EMQNWLVEQGQQKFRAKQIFEWLYQKRVDSIDEMTNLSKDLRQLLKDNFTVTTLTTVVKQ 87
Query 103 YSKDGTRKWVFRVGEGSGSLVETVLIPAEDKTGSRKTLCISSQVGCALDCSFCSTGKQGF 162
SKDGT K++F + +G +ETVL+ + ++C+++QVGC + C+FC++ G
Sbjct 88 ESKDGTIKFLFELQDGY--TIETVLM----RHDYGNSVCVTTQVGCRIGCTFCASTLGGL 141
Query 163 QRDLTPAEIIGQLWVANQSYVEDVPVAERTRAVTNVVMMGMGEPLLNFKPVVHSMSIMLD 222
+R+L EI+ Q+ ++ + V+ +V+MG+GEP N+ ++ + I+ D
Sbjct 142 KRNLEAGEIVSQVLTVQKA------LDATEERVSQIVIMGIGEPFENYDEMMDFLRIVND 195
Query 223 DYAYGMSKRRVTLSTSGVVPMIDKLAEE-LDVALAISLHAPNNPLRDELVPINKKYPLEQ 281
D + + R +T+STSG++P I A+E + + A+SLHA + +R L+PIN+ Y +E+
Sbjct 196 DNSLNIGARHITVSTSGIIPRIYDFADEDIQINFAVSLHAAKDEVRSRLMPINRAYNVEK 255
Query 282 LIAAAQRYITKDGNESARKHVTIEYVMLDGVNDHPEHAQQLVKLLKNLPSKINLIPFNPF 341
LI A Q Y E + VT EY + GVND EHA++L L+K L +NLIP N
Sbjct 256 LIEAIQYY-----QEKTNRRVTFEYGLFGGVNDQLEHARELAHLIKGLNCHVNLIPVNHV 310
Query 342 PHAPYGRSSRNRIMAFQKTLSDAGFVCTIRQTRGDDIDAACGQL 385
P Y ++++N I F+K L G TIR+ +G DIDAACGQL
Sbjct 311 PERNYVKTAKNDIFKFEKELKRLGINATIRREQGSDIDAACGQL 354
>Q6XK03 Probable dual-specificity RNA methyltransferase RlmN [Spiroplasma
citri]
Length=345
Score = 225 bits (574), Expect = 1e-73
Identities = 134/352 (38%), Positives = 208/352 (59%), Gaps = 20/352 (6%)
Query 35 NLLGMSRIELEQFFEQIGEKKFRAGQIMKWIHQYFVTDLAEMTNISGKLRTKLEQVCEIK 94
++ G + EL+ G KK+ A QI WI+ + EMTNIS R KL++ I+
Sbjct 3 SIFGYPKEELQLDLVAHGFKKYLAEQIFDWIYVKNIYSFDEMTNISKTDRNKLQEYYTIE 62
Query 95 APEVVHRHYSKDGTRKWVFRVGEGSGSLVETVLIPAEDKTGSRKTLCISSQVGCALDCSF 154
++V + SKD T K++F++ +G +ETVL+P ++C+++QVGC + C+F
Sbjct 63 PLKIVVQQQSKDWTVKFLFQLADGYK--IETVLMPQS----YGNSVCVTTQVGCNMACTF 116
Query 155 CSTGKQGFQRDLTPAEIIGQLWVANQSYVEDVPVAERTRAVTNVVMMGMGEPLLNFKPVV 214
C++G R+L+ AEI+ Q+ + N+ +A V+++V+MG+GEP NF +
Sbjct 117 CASGLLKKTRNLSTAEIVQQVMMVNRY------LATTNERVSHIVVMGIGEPFDNFDNTL 170
Query 215 HSMSIMLDDYAYGMSKRRVTLSTSGVVPMIDKLAE-ELDVALAISLHAPNNPLRDELVPI 273
++I+ D Y + R +T+ST G+VP I + AE + V LAISLHAPNN +R++L+PI
Sbjct 171 KFVNIINDPKGYQIGARHITISTCGLVPKIKQFAELKTQVNLAISLHAPNNTIRNQLMPI 230
Query 274 NKKYPLEQLIAAAQRYITKDGNESARKHVTIEYVMLDGVNDHPEHAQQLVKLLKNLPSKI 333
NK YP+E+L+ A + YI E + VT EY++++ VND E A +L KL++ L + +
Sbjct 231 NKAYPVEKLMDAVRYYI-----ELTNRRVTFEYILIENVNDSRETALELAKLIRGLNAYV 285
Query 334 NLIPFNPFPHAPYGRSSRNRIMAFQKTLSDAGFVCTIRQTRGDDIDAACGQL 385
NLIP+N A G +I F +TL C +R+ G DIDAACGQL
Sbjct 286 NLIPYNTV--AENGHQRSTKINKFFETLQQQKINCIVRREFGHDIDAACGQL 335
>O25970 Dual-specificity RNA methyltransferase RlmN [Helicobacter
pylori (strain ATCC 700392 / 26695)]
Length=357
Score = 192 bits (488), Expect = 1e-60
Identities = 122/348 (35%), Positives = 193/348 (55%), Gaps = 26/348 (7%)
Query 50 QIGEKKFRAGQIMKWIHQYFVTDLAEM-TNISGKLRTKLEQVCEIKAPEVVHRHYSKDGT 108
Q+ + FRA Q+ W++ + T +M N S LE+ ++ E+ H S DG+
Sbjct 15 QLLKPSFRAKQLYLWLYAKYKTSFKDMQNNFSKDFIAYLEREFALRTIEITHVRESVDGS 74
Query 109 RKWVFRVGEGSGSLVETVLIPAEDKT----------GSRKTLCISSQVGCALDCSFCSTG 158
+K++F+ + + E VL+ +DK + T+C+S Q+GC + CSFC T
Sbjct 75 KKYLFKSLRDNHTF-EAVLLKMKDKKIDAETNAILEREKYTVCVSCQIGCQVGCSFCFTQ 133
Query 159 KQGFQRDLTPAEIIGQLWVANQSYVEDVPVAERTRAVTNVVMMGMGEPLLNFKPVVHSMS 218
K GF R+L +EII Q + + ++P+ + N+V MGMGEPL N V ++
Sbjct 134 KGGFVRNLKASEIIQQALLIKED--NNLPLEK----ALNIVFMGMGEPLNNLDEVCKAIE 187
Query 219 IMLDDYAYGMSKRRVTLSTSGVVPMIDKLA-EELDVALAISLHAPNNPLRDELVPINKKY 277
I + +S +R+T+STSGV I LA + L V LAISLHA ++ R L+P+NKKY
Sbjct 188 IF--NTGMQISPKRITISTSGVADKIPILAGKNLGVQLAISLHAVDDKTRSSLMPLNKKY 245
Query 278 PLEQLIAAAQRYITKDGNESARKHVTIEYVMLDGVNDHPEHAQQLVKLLKNLPSKINLIP 337
+E ++ +++ + RK V EY+++ +ND + A++L+KLL + SK+NLI
Sbjct 246 NIECVLNEVRKWPLEQ-----RKRVMFEYLLIKDLNDSLDCAKKLLKLLNGIKSKVNLIL 300
Query 338 FNPFPHAPYGRSSRNRIMAFQKTLSDAGFVCTIRQTRGDDIDAACGQL 385
FNP + + R S F L+ G +CTIR+++ DI+AACGQL
Sbjct 301 FNPHEGSKFERPSLENARMFADFLNSKGLLCTIRESKALDIEAACGQL 348
>A2AXI2 Ribosomal RNA large subunit methyltransferase Cfr [Staphylococcus
warneri]
Length=349
Score = 162 bits (410), Expect = 2e-49
Identities = 119/358 (33%), Positives = 182/358 (51%), Gaps = 38/358 (11%)
Query 43 ELEQFFEQIGEKKFRAGQIMKWIHQYFVTDLAEMTNISGKLRTKL-----EQVCEIKAPE 97
++++F E +R QI I + ++ +M + LR L E V IK
Sbjct 11 KIQEFLRSNNEPDYRIKQITNAIFKQRISRFEDMKVLPKLLREDLINNFGETVLNIK--- 67
Query 98 VVHRHYSKDGTRKWVFRVGEGSGSLVETVLIPAEDKTGSRKTLCISSQVGCALDCSFCST 157
+ + + K +F V + VETV + + ++ CISSQ GC C FC+T
Sbjct 68 -LLAEQNSEQVTKVLFEVSKNER--VETVNMKYK---AGWESFCISSQCGCNFGCKFCAT 121
Query 158 GKQGFQRDLTPAEIIGQLWVANQSYVEDVPVAERTRAVTNVVMMGMGEPLLNFKPVVHSM 217
G G +++LT EI Q+ + + ++ MGMGE L N + V ++
Sbjct 122 GDIGLKKNLTVDEITDQVLYFHLL----------GHQIDSISFMGMGEALAN-RQVFDAL 170
Query 218 SIMLDDYAYGMSKRRVTLSTSGVVPMIDKLAEEL-DVALAISLHAPNNPLRDELVPINKK 276
D + +S RR+++ST G++P I K+ +E V L SLH+P + R +L+PIN +
Sbjct 171 DSFTDPNLFALSPRRLSISTIGIIPSIKKITQEYPQVNLTFSLHSPYSEERSKLMPINDR 230
Query 277 YPLEQLIAAAQRYITKDGNESARKHVTIEYVMLDGVNDHPEHAQQLVKLLKNLPSK---- 332
YP+++++ +I ++RK V I Y+ML GVND EHA ++V LLK+
Sbjct 231 YPIDEVMNILDEHIRL----TSRK-VYIAYIMLPGVNDSLEHANEVVSLLKSRYKSGKLY 285
Query 333 -INLIPFNPFPHAP--YGRSSRNRIMAFQKTLSDAGFVCTIRQTRGDDIDAACGQLVG 387
+NLI +NP AP YG ++ ++ AF K L AG TIR G DIDAACGQL G
Sbjct 286 HVNLIRYNPTISAPEMYGEANEGQVEAFYKVLKSAGIHVTIRSQFGIDIDAACGQLYG 343
>A5HBL2 Ribosomal RNA large subunit methyltransferase Cfr [Staphylococcus
aureus]
Length=349
Score = 162 bits (410), Expect = 2e-49
Identities = 119/358 (33%), Positives = 182/358 (51%), Gaps = 38/358 (11%)
Query 43 ELEQFFEQIGEKKFRAGQIMKWIHQYFVTDLAEMTNISGKLRTKL-----EQVCEIKAPE 97
++++F E +R QI I + ++ +M + LR L E V IK
Sbjct 11 KIQEFLRSNNEPDYRIKQITNAIFKQRISRFEDMKVLPKLLREDLINNFGETVLNIK--- 67
Query 98 VVHRHYSKDGTRKWVFRVGEGSGSLVETVLIPAEDKTGSRKTLCISSQVGCALDCSFCST 157
+ + + K +F V + VETV + + ++ CISSQ GC C FC+T
Sbjct 68 -LLAEQNSEQVTKVLFEVSKNER--VETVNMKYK---AGWESFCISSQCGCNFGCKFCAT 121
Query 158 GKQGFQRDLTPAEIIGQLWVANQSYVEDVPVAERTRAVTNVVMMGMGEPLLNFKPVVHSM 217
G G +++LT EI Q+ + + ++ MGMGE L N + V ++
Sbjct 122 GDIGLKKNLTVDEITDQVLYFHLL----------GHQIDSISFMGMGEALAN-RQVFDAL 170
Query 218 SIMLDDYAYGMSKRRVTLSTSGVVPMIDKLAEEL-DVALAISLHAPNNPLRDELVPINKK 276
D + +S RR+++ST G++P I K+ +E V L SLH+P + R +L+PIN +
Sbjct 171 DSFTDPNLFALSPRRLSISTIGIIPSIKKITQEYPQVNLTFSLHSPYSEERSKLMPINDR 230
Query 277 YPLEQLIAAAQRYITKDGNESARKHVTIEYVMLDGVNDHPEHAQQLVKLLKNLPSK---- 332
YP+++++ +I ++RK V I Y+ML GVND EHA ++V LLK+
Sbjct 231 YPIDEVMNILDEHIRL----TSRK-VYIAYIMLPGVNDSLEHANEVVSLLKSRYKSGKLY 285
Query 333 -INLIPFNPFPHAP--YGRSSRNRIMAFQKTLSDAGFVCTIRQTRGDDIDAACGQLVG 387
+NLI +NP AP YG ++ ++ AF K L AG TIR G DIDAACGQL G
Sbjct 286 HVNLIRYNPTISAPEMYGEANEGQVEAFYKVLKSAGIHVTIRSQFGIDIDAACGQLYG 343
>Q9FBG4 Ribosomal RNA large subunit methyltransferase Cfr [Mammaliicoccus
sciuri]
Length=349
Score = 162 bits (410), Expect = 2e-49
Identities = 119/358 (33%), Positives = 182/358 (51%), Gaps = 38/358 (11%)
Query 43 ELEQFFEQIGEKKFRAGQIMKWIHQYFVTDLAEMTNISGKLRTKL-----EQVCEIKAPE 97
++++F E +R QI I + ++ +M + LR L E V IK
Sbjct 11 KIQEFLRSNNEPDYRIKQITNAIFKQRISRFEDMKVLPKLLREDLINNFGETVLNIK--- 67
Query 98 VVHRHYSKDGTRKWVFRVGEGSGSLVETVLIPAEDKTGSRKTLCISSQVGCALDCSFCST 157
+ + + K +F V + VETV + + ++ CISSQ GC C FC+T
Sbjct 68 -LLAEQNSEQVTKVLFEVSKNER--VETVNMKYK---AGWESFCISSQCGCNFGCKFCAT 121
Query 158 GKQGFQRDLTPAEIIGQLWVANQSYVEDVPVAERTRAVTNVVMMGMGEPLLNFKPVVHSM 217
G G +++LT EI Q+ + + ++ MGMGE L N + V ++
Sbjct 122 GDIGLKKNLTVDEITDQVLYFHLL----------GHQIDSISFMGMGEALAN-RQVFDAL 170
Query 218 SIMLDDYAYGMSKRRVTLSTSGVVPMIDKLAEEL-DVALAISLHAPNNPLRDELVPINKK 276
D + +S RR+++ST G++P I K+ +E V L SLH+P + R +L+PIN +
Sbjct 171 DSFTDPNLFALSPRRLSISTIGIIPSIKKITQEYPQVNLTFSLHSPYSEERSKLMPINDR 230
Query 277 YPLEQLIAAAQRYITKDGNESARKHVTIEYVMLDGVNDHPEHAQQLVKLLKNLPSK---- 332
YP+++++ +I ++RK V I Y+ML GVND EHA ++V LLK+
Sbjct 231 YPIDEVMNILDEHIRL----TSRK-VYIAYIMLPGVNDSLEHANEVVSLLKSRYKSGKLY 285
Query 333 -INLIPFNPFPHAP--YGRSSRNRIMAFQKTLSDAGFVCTIRQTRGDDIDAACGQLVG 387
+NLI +NP AP YG ++ ++ AF K L AG TIR G DIDAACGQL G
Sbjct 286 HVNLIRYNPTISAPEMYGEANEGQVEAFYKVLKSAGIHVTIRSQFGIDIDAACGQLYG 343
Lambda K H a alpha
0.319 0.133 0.386 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 2880072
Database: cb3ff236d1900474c6a52f891e0a82be.SwissProt.fasta
Posted date: May 20, 2024 12:43 PM
Number of letters in database: 9,228
Number of sequences in database: 24
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
