BLASTP 2.12.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics: Alejandro A. Schaffer,
L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri
I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids
Res. 29:2994-3005.
Database: 499822d6c019872ea790e3d495cdb503.SwissProt.fasta
15 sequences; 4,954 total letters
Query= ACIAD0560
Length=261
Score E
Sequences producing significant alignments: (Bits) Value
Q57065 Uncharacterized protein HI_0367 [Haemophilus influenzae (s... 53.9 8e-12
Q6D275 Cytoskeleton protein RodZ [Pectobacterium atrosepticum (st... 52.4 3e-11
A7MGV6 Cytoskeleton protein RodZ [Cronobacter sakazakii (strain A... 51.6 5e-11
A8AD70 Cytoskeleton protein RodZ [Citrobacter koseri (strain ATCC... 51.2 7e-11
A8GHW6 Cytoskeleton protein RodZ [Serratia proteamaculans (strain... 49.7 2e-10
B7LKC2 Cytoskeleton protein RodZ [Escherichia fergusonii (strain ... 47.4 1e-09
A9MHL4 Cytoskeleton protein RodZ [Salmonella arizonae (strain ATC... 47.0 2e-09
Q8Z4P3 Cytoskeleton protein RodZ [Salmonella typhi] 47.0 2e-09
A6TCD5 Cytoskeleton protein RodZ [Klebsiella pneumoniae subsp. pn... 47.0 2e-09
B4TD94 Cytoskeleton protein RodZ [Salmonella heidelberg (strain S... 47.0 2e-09
B5R583 Cytoskeleton protein RodZ [Salmonella enteritidis PT4 (str... 47.0 2e-09
B5FR64 Cytoskeleton protein RodZ [Salmonella dublin (strain CT_02... 47.0 2e-09
Q57LI5 Cytoskeleton protein RodZ [Salmonella choleraesuis (strain... 47.0 2e-09
B5F199 Cytoskeleton protein RodZ [Salmonella agona (strain SL483)] 47.0 2e-09
P27434 Cytoskeleton protein RodZ [Escherichia coli (strain K12)] 44.7 1e-08
>Q57065 Uncharacterized protein HI_0367 [Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd)]
Length=303
Score = 53.9 bits (128), Expect = 8e-12
Identities = 37/84 (44%), Positives = 46/84 (55%), Gaps = 4/84 (5%)
Query 23 VQRPGEYLRQIRIAKKLELESVAADLKMPVKTLTALENDDY--KALPEATFIKGYYRSYA 80
V PGE RQ R A L LE VA ++ + L LEN+++ K+ P A F+KGY RSYA
Sbjct 8 VLSPGEIFRQTREALNLSLEDVAKEITLRPSILEQLENNEFIQKSTP-AIFVKGYVRSYA 66
Query 81 KYLSADASVITQ-RFDEIYANDTG 103
K+L SV F E ND G
Sbjct 67 KFLRLPDSVWENIVFAETEKNDLG 90
>Q6D275 Cytoskeleton protein RodZ [Pectobacterium atrosepticum
(strain SCRI 1043 / ATCC BAA-672)]
Length=332
Score = 52.4 bits (124), Expect = 3e-11
Identities = 31/90 (34%), Positives = 51/90 (57%), Gaps = 7/90 (8%)
Query 161 SGATAPAASNVEVLPLNSASSTSGDHLVLNFTHPTSVHIVDSTGKVLATG--RQASTLEL 218
+GA APAA+ + P+++A + LV+ FT + + D +GK L +G R STL L
Sbjct 234 AGAVAPAATVADSNPVSAAHA-----LVMTFTADCWLEVTDVSGKKLFSGMQRNGSTLNL 288
Query 219 TGQSPFQIRLDDATAVSLSLNQEQISLSPY 248
GQSP+Q+++ AV + + + LS +
Sbjct 289 DGQSPYQLKIGAPAAVQIKFQGKPVDLSRF 318
Score = 40.8 bits (94), Expect = 2e-07
Identities = 55/229 (24%), Positives = 98/229 (43%), Gaps = 28/229 (12%)
Query 26 PGEYLRQIRIAKKLELESVAADLKMPVKTLTALENDDYKALPEATFIKGYYRSYAKYLSA 85
PGE LR+ R L +++A L + + T+ +E+ A TF++GY RSYAK +
Sbjct 15 PGERLREARERLGLTQQTIAERLCLKITTVRDIEDGTTPADLAPTFLRGYIRSYAKLVHL 74
Query 86 DASVITQRFDEIYANDTGLLPNHALTNSPIKIMGKLPGSNSERNRKWLKRGVLIVLAIAL 145
+ D+ +P A++ SP++ L S +R+ WL ++I + L
Sbjct 75 PEDNLLPIMDK------QAVPK-AISVSPMQSF-SLKKSRKKRD-GWL---MIITWLVVL 122
Query 146 IALVVTVIQNWSNKKS-----------GATAPAASNVEVLPL--NSA---SSTSGDHLVL 189
+ L +T W N ++ ++ + + + +PL NSA +ST+G
Sbjct 123 VVLGLTGAWWWQNHQAQQAEINSMVDHASSMQSQTEGQSVPLMDNSAPQETSTAGSAATP 182
Query 190 NFTHPTSVHIVDSTGKVLATGRQASTLELTGQSPFQIRLDDATAVSLSL 238
T + +T + AS+ + QSP Q + A +L
Sbjct 183 PSTPVDLSATIAATPSTPPSSTTASSAAPSSQSPSQANATQSQAAGNAL 231
>A7MGV6 Cytoskeleton protein RodZ [Cronobacter sakazakii (strain
ATCC BAA-894)]
Length=338
Score = 51.6 bits (122), Expect = 5e-11
Identities = 27/91 (30%), Positives = 52/91 (57%), Gaps = 2/91 (2%)
Query 160 KSGATAPAASNVEVLPLNSASSTSGDHLVLNFTHPTSVHIVDSTGKVLATG--RQASTLE 217
+ T PA S + V ++A + + LV+NFT + + D+TGK L +G R+ + L
Sbjct 229 QQNTTQPAQSQLPVGQASTAPAADANALVMNFTADCWLEVTDATGKKLFSGLQRKDTNLN 288
Query 218 LTGQSPFQIRLDDATAVSLSLNQEQISLSPY 248
L+GQ+P+++++ +AV + + + LS +
Sbjct 289 LSGQAPYRLKIGAPSAVQIQYQGKPVDLSRF 319
Score = 37.0 bits (84), Expect = 3e-06
Identities = 37/141 (26%), Positives = 59/141 (42%), Gaps = 24/141 (17%)
Query 27 GEYLRQIRIAKKLELESVAADLKMPVKTLTALENDDYKALPEATFIKGYYRSYAKYLSAD 86
GE LR R L + VA L + V T+ +E D A +TF++GY RSYA+
Sbjct 16 GERLRLAREQLGLSQQVVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL---- 71
Query 87 ASVITQRFDEIYANDTGLLPNHALTNSPIKIMGKLP------GSNSERNRKWLKRGVLIV 140
++ + LLP A +P++ P G + ++ WL +V
Sbjct 72 ----------VHVPEEELLPMLA-KQAPVRTAQVAPMQTYALGKSRKKRDGWLMSFTWLV 120
Query 141 LAIALIALVVTVIQNWSNKKS 161
L + + +T W N K+
Sbjct 121 L---FVVVGLTGAWWWQNHKA 138
>A8AD70 Cytoskeleton protein RodZ [Citrobacter koseri (strain
ATCC BAA-895 / CDC 4225-83 / SGSC4696)]
Length=337
Score = 51.2 bits (121), Expect = 7e-11
Identities = 33/104 (32%), Positives = 57/104 (55%), Gaps = 7/104 (7%)
Query 152 VIQNWSNKKSGATAPAAS-NVEVLPLNSA----SSTSGDHLVLNFTHPTSVHIVDSTGKV 206
V + +N + TAPAA+ + LP + A S+ + LV+NFT + + D+TGK
Sbjct 215 VAPSQANVDTATTAPAATGDTASLPTDQAGVATSAVDQNALVMNFTADCWLEVTDATGKK 274
Query 207 LATG--RQASTLELTGQSPFQIRLDDATAVSLSLNQEQISLSPY 248
L +G R+ L LTGQ+P+++++ AV + + + LS +
Sbjct 275 LFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRF 318
Score = 37.0 bits (84), Expect = 3e-06
Identities = 22/58 (38%), Positives = 31/58 (53%), Gaps = 0/58 (0%)
Query 24 QRPGEYLRQIRIAKKLELESVAADLKMPVKTLTALENDDYKALPEATFIKGYYRSYAK 81
Q G LR R L ++VA L + V T+ +E D A +TF++GY RSYA+
Sbjct 13 QSTGVRLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70
>A8GHW6 Cytoskeleton protein RodZ [Serratia proteamaculans (strain
568)]
Length=323
Score = 49.7 bits (117), Expect = 2e-10
Identities = 53/221 (24%), Positives = 87/221 (39%), Gaps = 30/221 (14%)
Query 27 GEYLRQIRIAKKLELESVAADLKMPVKTLTALENDDYKALPEATFIKGYYRSYAKYLSAD 86
GE LRQ R L ++VA L + + T+ +E D+ A +TF++GY RSYAK
Sbjct 16 GERLRQAREQLGLSQQAVAERLCLKMSTVRDIEEDNLSADLASTFVRGYIRSYAKL---- 71
Query 87 ASVITQRFDEIYANDTGLLPNHALTNSPIKIMGKLPGSNSERNRKWLKRGVLIVLAIALI 146
+ + LLP A +P+K+ P + ++ KR ++ LI
Sbjct 72 ----------VRLPEDELLPMLA-KQAPLKVAKVAPMQSFSLGKRRKKRDGWLMSFTWLI 120
Query 147 ALVVTVIQN---WSNKK------------SGATAPAASNVEVLPLNSASSTSGDHLVLNF 191
VV + W N K S A + + +PL +++ + L N
Sbjct 121 VFVVVGLTGAWWWQNHKAQQEEIVTMADQSSAQLSQNNEGQSVPLTDSNADNSAPLADNG 180
Query 192 THPTSVHIVDSTGKVLATGRQASTLELTGQSPFQIRLDDAT 232
+ P + + A A+ + SP Q L + T
Sbjct 181 STPVDTGVAPQQSQTPAVSGSATAQQPAVVSPSQTTLPETT 221
Score = 35.4 bits (80), Expect = 1e-05
Identities = 26/96 (27%), Positives = 45/96 (47%), Gaps = 7/96 (7%)
Query 164 TAPAASNVEVLPLNSASSTSG----DHLVLNFTHPTSVHIVDSTGKVLATGRQAS--TLE 217
T PAA LP A T+ + LV+ F+ + + D+ GK L +G Q S L
Sbjct 220 TTPAAPTAP-LPTADAGVTAPAVDPNALVMEFSADCWLQVSDANGKTLYSGSQKSGGKLS 278
Query 218 LTGQSPFQIRLDDATAVSLSLNQEQISLSPYTVNGK 253
L G +P+++ + AV + + + LS + + +
Sbjct 279 LAGTAPYKLTIGAPAAVQIQYQGKPVDLSRFVKSNR 314
>B7LKC2 Cytoskeleton protein RodZ [Escherichia fergusonii (strain
ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226
/ LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)]
Length=338
Score = 47.4 bits (111), Expect = 1e-09
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 13/105 (12%)
Query 157 SNKKSGATAPAA-------SNVEVLPLNSASSTSG----DHLVLNFTHPTSVHIVDSTGK 205
+N + TAPAA LP + A T+ + LV+NFT + + D+TGK
Sbjct 215 ANVDTATTAPAAPATTTTPDTATPLPTDQAGVTTPAADPNALVMNFTADCWLEVTDATGK 274
Query 206 VLATG--RQASTLELTGQSPFQIRLDDATAVSLSLNQEQISLSPY 248
L +G R+ L LTGQ+P+++++ AV + + + LS +
Sbjct 275 KLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRF 319
Score = 35.8 bits (81), Expect = 7e-06
Identities = 21/55 (38%), Positives = 30/55 (55%), Gaps = 0/55 (0%)
Query 27 GEYLRQIRIAKKLELESVAADLKMPVKTLTALENDDYKALPEATFIKGYYRSYAK 81
G LR R L ++VA L + V T+ +E D A +TF++GY RSYA+
Sbjct 16 GVRLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYAR 70
>A9MHL4 Cytoskeleton protein RodZ [Salmonella arizonae (strain
ATCC BAA-731 / CDC346-86 / RSK2980)]
Length=321
Score = 47.0 bits (110), Expect = 2e-09
Identities = 30/104 (29%), Positives = 54/104 (52%), Gaps = 7/104 (7%)
Query 152 VIQNWSNKKSGATAPAASNVE-VLPLNSAS----STSGDHLVLNFTHPTSVHIVDSTGKV 206
V + +N + AT+ A+ LP + A + + LV+NFT + + D+TGK
Sbjct 199 VAPSQANVDTAATSATATETSSALPTDQAGVAAPAADSNALVMNFTADCWLEVTDATGKK 258
Query 207 LATG--RQASTLELTGQSPFQIRLDDATAVSLSLNQEQISLSPY 248
L +G R+ L LTGQ+P+++++ AV + + + LS +
Sbjct 259 LFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRF 302
Score = 37.0 bits (84), Expect = 3e-06
Identities = 35/141 (25%), Positives = 58/141 (41%), Gaps = 18/141 (13%)
Query 24 QRPGEYLRQIRIAKKLELESVAADLKMPVKTLTALENDDYKALPEATFIKGYYRSYAKYL 83
Q G LR R L ++VA L + V T+ +E D + +TF++GY RSYA+
Sbjct 13 QTTGVRLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPSDLASTFLRGYIRSYARL- 71
Query 84 SADASVITQRFDEIYANDTGLLPNHALTNSPIKIMGKLPGSNSERNRKWLKRGVLIVLAI 143
++ + LLP +P++ P N ++ KR ++
Sbjct 72 -------------VHVPEEELLPG-LEKQAPLRAAKVAPMQNFSLGKRRKKRDGWLMSFT 117
Query 144 ALIALVVTVIQN---WSNKKS 161
L+ VV + W N K+
Sbjct 118 WLVLFVVVGLTGAWWWQNHKA 138
>Q8Z4P3 Cytoskeleton protein RodZ [Salmonella typhi]
Length=324
Score = 47.0 bits (110), Expect = 2e-09
Identities = 33/106 (31%), Positives = 56/106 (53%), Gaps = 9/106 (8%)
Query 152 VIQNWSNKKSGAT--APAASNV-EVLPLNSAS----STSGDHLVLNFTHPTSVHIVDSTG 204
V + +N + AT APAA+ LP + A + + LV+NFT + + D+TG
Sbjct 200 VAPSQANVDTAATSAAPAATETPSALPTSQAGVAAPAADPNALVMNFTADCWLEVTDATG 259
Query 205 KVLATG--RQASTLELTGQSPFQIRLDDATAVSLSLNQEQISLSPY 248
K L +G R+ L LTGQ+P+++++ AV + + + LS +
Sbjct 260 KKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRF 305
Score = 39.7 bits (91), Expect = 4e-07
Identities = 58/244 (24%), Positives = 94/244 (39%), Gaps = 36/244 (15%)
Query 24 QRPGEYLRQIRIAKKLELESVAADLKMPVKTLTALENDDYKALPEATFIKGYYRSYAKYL 83
Q G LR R L ++VA L + V T+ +E D + +TF++GY RSYA+ +
Sbjct 13 QTTGVRLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPSDLASTFLRGYIRSYARLV 72
Query 84 SADASVITQRFDEIYANDTGLLPNHALTNSPIKIMGKLPGSNSERNRKWLKRGVLIVLAI 143
+E+ P A +P++ G ++ WL +VL
Sbjct 73 HVPE-------EELLPGLEKQAPLRAAKVAPMQSFSL--GKRRKKRDGWLMSFTWLVL-- 121
Query 144 ALIALVVTVIQNWSNKKSG----ATAPAASNVEV---------LPLNSASSTSGDHLVLN 190
+ + +T W N K+ T S E+ +PL+++++TS D
Sbjct 122 -FVVVGLTGAWWWQNHKAQQEEITTMADQSTAELNADKDSGQSVPLDTSAATSQDTTPAQ 180
Query 191 FTHPTSVHIVDSTGKVLATGRQASTLELTGQSPFQIRLDDATAVSLSLNQEQISLSPYTV 250
T P VDST + + T +P Q +D A + E S P +
Sbjct 181 -TAPAPATPVDST----------AATQNTVVAPSQANVDTAATSAAPAATETPSALPTSQ 229
Query 251 NGKA 254
G A
Sbjct 230 AGVA 233
>A6TCD5 Cytoskeleton protein RodZ [Klebsiella pneumoniae subsp.
pneumoniae (strain ATCC 700721 / MGH 78578)]
Length=331
Score = 47.0 bits (110), Expect = 2e-09
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 6/90 (7%)
Query 165 APAASNVEVLPLNSASST----SGDHLVLNFTHPTSVHIVDSTGKVLATG--RQASTLEL 218
APA + LP + A+ T S LV+NF+ + + D+TGK L +G R+ L L
Sbjct 223 APATTPASPLPTDQANVTTPAASAQDLVMNFSADCWLEVSDATGKKLFSGLQRKGGNLNL 282
Query 219 TGQSPFQIRLDDATAVSLSLNQEQISLSPY 248
+GQ+P+++++ AV + + + LS +
Sbjct 283 SGQAPYKLKIGAPAAVQIQYLGKPVDLSRF 312
Score = 36.6 bits (83), Expect = 4e-06
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 0/55 (0%)
Query 27 GEYLRQIRIAKKLELESVAADLKMPVKTLTALENDDYKALPEATFIKGYYRSYAK 81
G LR R L ++VA L + V T+ +E+D A +TF++GY RSYA+
Sbjct 16 GARLRHAREQLGLSQQAVAERLCLKVSTVRDIEDDKAPADLASTFLRGYIRSYAR 70
>B4TD94 Cytoskeleton protein RodZ [Salmonella heidelberg (strain
SL476)]
Length=334
Score = 47.0 bits (110), Expect = 2e-09
Identities = 33/106 (31%), Positives = 56/106 (53%), Gaps = 9/106 (8%)
Query 152 VIQNWSNKKSGAT--APAASNV-EVLPLNSAS----STSGDHLVLNFTHPTSVHIVDSTG 204
V + +N + AT APAA+ LP + A + + LV+NFT + + D+TG
Sbjct 210 VAPSQANVDTAATSAAPAATETPSALPTSQAGVAAPAADPNALVMNFTADCWLEVTDATG 269
Query 205 KVLATG--RQASTLELTGQSPFQIRLDDATAVSLSLNQEQISLSPY 248
K L +G R+ L LTGQ+P+++++ AV + + + LS +
Sbjct 270 KKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRF 315
Score = 45.4 bits (106), Expect = 5e-09
Identities = 59/244 (24%), Positives = 93/244 (38%), Gaps = 26/244 (11%)
Query 24 QRPGEYLRQIRIAKKLELESVAADLKMPVKTLTALENDDYKALPEATFIKGYYRSYAKYL 83
Q G LR R L ++VA L + V T+ +E D + +TF++GY RSYA+ +
Sbjct 13 QTTGVRLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPSDLASTFLRGYIRSYARLV 72
Query 84 SADASVITQRFDEIYANDTGLLPNHALTNSPIKIMGKLPGSNSERNRKWLKRGVLIVLAI 143
+E+ P A +P++ G ++ WL +VL
Sbjct 73 HVPE-------EELLPGLEKQAPLRAAKVAPMQSFSL--GKRRKKRDGWLMSFTWLVL-- 121
Query 144 ALIALVVTVIQNWSNKKSG----ATAPAASNVEV---------LPLNSASSTSGDHLVLN 190
+ + +T W N K+ T S E+ +PL++ +TS D
Sbjct 122 -FVVVGLTGAWWWQNHKAQQEEITTMADQSTAELNADKDSGQSVPLDTRDATSQDTTPAQ 180
Query 191 FTHPTSVHIVDSTGKVLATGRQASTLELTGQSPFQIRLDDATAVSLSLNQEQISLSPYTV 250
T P VDST A+ + T +P Q +D A + E S P +
Sbjct 181 -TAPAPATPVDSTAATQTPAPTAAATQNTVVAPSQANVDTAATSAAPAATETPSALPTSQ 239
Query 251 NGKA 254
G A
Sbjct 240 AGVA 243
>B5R583 Cytoskeleton protein RodZ [Salmonella enteritidis PT4
(strain P125109)]
Length=334
Score = 47.0 bits (110), Expect = 2e-09
Identities = 33/106 (31%), Positives = 56/106 (53%), Gaps = 9/106 (8%)
Query 152 VIQNWSNKKSGAT--APAASNV-EVLPLNSAS----STSGDHLVLNFTHPTSVHIVDSTG 204
V + +N + AT APAA+ LP + A + + LV+NFT + + D+TG
Sbjct 210 VAPSQANVDTAATSAAPAATETPSALPTSQAGVAAPAADPNALVMNFTADCWLEVTDATG 269
Query 205 KVLATG--RQASTLELTGQSPFQIRLDDATAVSLSLNQEQISLSPY 248
K L +G R+ L LTGQ+P+++++ AV + + + LS +
Sbjct 270 KKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRF 315
Score = 45.1 bits (105), Expect = 7e-09
Identities = 59/244 (24%), Positives = 93/244 (38%), Gaps = 26/244 (11%)
Query 24 QRPGEYLRQIRIAKKLELESVAADLKMPVKTLTALENDDYKALPEATFIKGYYRSYAKYL 83
Q G LR R L ++VA L + V T+ +E D + +TF++GY RSYA+ +
Sbjct 13 QTTGVRLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPSDLASTFLRGYIRSYARLV 72
Query 84 SADASVITQRFDEIYANDTGLLPNHALTNSPIKIMGKLPGSNSERNRKWLKRGVLIVLAI 143
+E+ P A +P++ G ++ WL +VL
Sbjct 73 HVPE-------EELLPGLEKQAPLRAAKVAPMQSFSL--GKRRKKRDGWLMSFTWLVL-- 121
Query 144 ALIALVVTVIQNWSNKKSG----ATAPAASNVEV---------LPLNSASSTSGDHLVLN 190
+ + +T W N K+ T S E+ +PL++ + TS D
Sbjct 122 -FVVVGLTGAWWWQNHKAQQEEITTMADQSTAELNADKDSGQSVPLDTGAVTSQDTTPAQ 180
Query 191 FTHPTSVHIVDSTGKVLATGRQASTLELTGQSPFQIRLDDATAVSLSLNQEQISLSPYTV 250
T P VDST A+ + T +P Q +D A + E S P +
Sbjct 181 -TAPAPATPVDSTAATQTPAPTAAATQNTVVAPSQANVDTAATSAAPAATETPSALPTSQ 239
Query 251 NGKA 254
G A
Sbjct 240 AGVA 243
>B5FR64 Cytoskeleton protein RodZ [Salmonella dublin (strain CT_02021853)]
Length=334
Score = 47.0 bits (110), Expect = 2e-09
Identities = 33/106 (31%), Positives = 56/106 (53%), Gaps = 9/106 (8%)
Query 152 VIQNWSNKKSGAT--APAASNV-EVLPLNSAS----STSGDHLVLNFTHPTSVHIVDSTG 204
V + +N + AT APAA+ LP + A + + LV+NFT + + D+TG
Sbjct 210 VAPSQANVDTAATSAAPAATETPSALPTSQAGVAAPAADPNALVMNFTADCWLEVTDATG 269
Query 205 KVLATG--RQASTLELTGQSPFQIRLDDATAVSLSLNQEQISLSPY 248
K L +G R+ L LTGQ+P+++++ AV + + + LS +
Sbjct 270 KKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRF 315
Score = 45.1 bits (105), Expect = 7e-09
Identities = 59/244 (24%), Positives = 93/244 (38%), Gaps = 26/244 (11%)
Query 24 QRPGEYLRQIRIAKKLELESVAADLKMPVKTLTALENDDYKALPEATFIKGYYRSYAKYL 83
Q G LR R L ++VA L + V T+ +E D + +TF++GY RSYA+ +
Sbjct 13 QTTGVRLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPSDLASTFLRGYIRSYARLV 72
Query 84 SADASVITQRFDEIYANDTGLLPNHALTNSPIKIMGKLPGSNSERNRKWLKRGVLIVLAI 143
+E+ P A +P++ G ++ WL +VL
Sbjct 73 HVPE-------EELLPGLEKQAPLRAAKVAPMQSFSL--GKRRKKRDGWLMSFTWLVL-- 121
Query 144 ALIALVVTVIQNWSNKKSG----ATAPAASNVEV---------LPLNSASSTSGDHLVLN 190
+ + +T W N K+ T S E+ +PL++ + TS D
Sbjct 122 -FVVVGLTGAWWWQNHKAQQEEITTMADQSTAELNADKDSGQSVPLDTGAVTSQDTTPAQ 180
Query 191 FTHPTSVHIVDSTGKVLATGRQASTLELTGQSPFQIRLDDATAVSLSLNQEQISLSPYTV 250
T P VDST A+ + T +P Q +D A + E S P +
Sbjct 181 -TAPAPATPVDSTAATQTPAPTAAATQNTVVAPSQANVDTAATSAAPAATETPSALPTSQ 239
Query 251 NGKA 254
G A
Sbjct 240 AGVA 243
>Q57LI5 Cytoskeleton protein RodZ [Salmonella choleraesuis (strain
SC-B67)]
Length=334
Score = 47.0 bits (110), Expect = 2e-09
Identities = 33/106 (31%), Positives = 56/106 (53%), Gaps = 9/106 (8%)
Query 152 VIQNWSNKKSGAT--APAASNV-EVLPLNSAS----STSGDHLVLNFTHPTSVHIVDSTG 204
V + +N + AT APAA+ LP + A + + LV+NFT + + D+TG
Sbjct 210 VAPSQANVDTAATSAAPAATETPSALPTSQAGVAAPAADPNALVMNFTADCWLEVTDATG 269
Query 205 KVLATG--RQASTLELTGQSPFQIRLDDATAVSLSLNQEQISLSPY 248
K L +G R+ L LTGQ+P+++++ AV + + + LS +
Sbjct 270 KKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRF 315
Score = 45.4 bits (106), Expect = 5e-09
Identities = 59/244 (24%), Positives = 93/244 (38%), Gaps = 26/244 (11%)
Query 24 QRPGEYLRQIRIAKKLELESVAADLKMPVKTLTALENDDYKALPEATFIKGYYRSYAKYL 83
Q G LR R L ++VA L + V T+ +E D + +TF++GY RSYA+ +
Sbjct 13 QTTGVRLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPSDLASTFLRGYIRSYARLV 72
Query 84 SADASVITQRFDEIYANDTGLLPNHALTNSPIKIMGKLPGSNSERNRKWLKRGVLIVLAI 143
+E+ P A +P++ G ++ WL +VL
Sbjct 73 HVPE-------EELLPGLEKQAPLRAAKVAPMQSFSL--GKRRKKRDGWLMSFTWLVL-- 121
Query 144 ALIALVVTVIQNWSNKKSG----ATAPAASNVEV---------LPLNSASSTSGDHLVLN 190
+ + +T W N K+ T S E+ +PL++ +TS D
Sbjct 122 -FVVVGLTGAWWWQNHKAQQEEITTMADQSTAELNADKDSGQSVPLDTRDATSQDTTPAQ 180
Query 191 FTHPTSVHIVDSTGKVLATGRQASTLELTGQSPFQIRLDDATAVSLSLNQEQISLSPYTV 250
T P VDST A+ + T +P Q +D A + E S P +
Sbjct 181 -TAPAPATPVDSTAATQTPAPTAAATQNTVVAPSQANVDTAATSAAPAATETPSALPTSQ 239
Query 251 NGKA 254
G A
Sbjct 240 AGVA 243
>B5F199 Cytoskeleton protein RodZ [Salmonella agona (strain SL483)]
Length=334
Score = 47.0 bits (110), Expect = 2e-09
Identities = 33/106 (31%), Positives = 56/106 (53%), Gaps = 9/106 (8%)
Query 152 VIQNWSNKKSGAT--APAASNV-EVLPLNSAS----STSGDHLVLNFTHPTSVHIVDSTG 204
V + +N + AT APAA+ LP + A + + LV+NFT + + D+TG
Sbjct 210 VAPSQANVDTAATSAAPAATETPSALPTSQAGVAAPAADPNALVMNFTADCWLEVTDATG 269
Query 205 KVLATG--RQASTLELTGQSPFQIRLDDATAVSLSLNQEQISLSPY 248
K L +G R+ L LTGQ+P+++++ AV + + + LS +
Sbjct 270 KKLFSGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRF 315
Score = 46.2 bits (108), Expect = 3e-09
Identities = 59/244 (24%), Positives = 94/244 (39%), Gaps = 26/244 (11%)
Query 24 QRPGEYLRQIRIAKKLELESVAADLKMPVKTLTALENDDYKALPEATFIKGYYRSYAKYL 83
Q G LR R L ++VA L + V T+ +E D + +TF++GY RSYA+ +
Sbjct 13 QTTGVRLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPSDLASTFLRGYIRSYARLV 72
Query 84 SADASVITQRFDEIYANDTGLLPNHALTNSPIKIMGKLPGSNSERNRKWLKRGVLIVLAI 143
+E+ P A +P++ G ++ WL +VL
Sbjct 73 HVPE-------EELLPGLEKQAPLRAAKVAPMQSFSL--GKRRKKRDGWLMSFTWLVL-- 121
Query 144 ALIALVVTVIQNWSNKKSG----ATAPAASNVEV---------LPLNSASSTSGDHLVLN 190
+ + +T W N K+ T S E+ +PL++ ++TS D
Sbjct 122 -FVVVGLTGAWWWQNHKAQQEEITTMADQSTAELNADKDSGQSVPLDTGAATSQDTTPAQ 180
Query 191 FTHPTSVHIVDSTGKVLATGRQASTLELTGQSPFQIRLDDATAVSLSLNQEQISLSPYTV 250
T P VDST A+ + T +P Q +D A + E S P +
Sbjct 181 -TAPAPATPVDSTAATQTPAPTAAATQNTVVAPSQANVDTAATSAAPAATETPSALPTSQ 239
Query 251 NGKA 254
G A
Sbjct 240 AGVA 243
>P27434 Cytoskeleton protein RodZ [Escherichia coli (strain K12)]
Length=337
Score = 44.7 bits (104), Expect = 1e-08
Identities = 29/94 (31%), Positives = 49/94 (52%), Gaps = 8/94 (9%)
Query 161 SGATAPAASNVEVLPLNSASSTSG----DHLVLNFTHPTSVHIVDSTGKVLATG--RQAS 214
+ AT P LP + A T+ + LV+NFT + + D+TGK L +G R+
Sbjct 227 TAATTP--DGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLFSGMQRKDG 284
Query 215 TLELTGQSPFQIRLDDATAVSLSLNQEQISLSPY 248
L LTGQ+P+++++ AV + + + LS +
Sbjct 285 NLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRF 318
Score = 37.4 bits (85), Expect = 2e-06
Identities = 53/224 (24%), Positives = 88/224 (39%), Gaps = 37/224 (17%)
Query 27 GEYLRQIRIAKKLELESVAADLKMPVKTLTALENDDYKALPEATFIKGYYRSYAKYLSAD 86
G LR R L ++VA L + V T+ +E D A +TF++GY RSYA+
Sbjct 16 GARLRNAREQLGLSQQAVAERLCLKVSTVRDIEEDKAPADLASTFLRGYIRSYARL---- 71
Query 87 ASVITQRFDEIYANDTGLLPNHALTNSPIKIMGKLPGSNSERNRKWLKRGVLIVLAIALI 146
++ + LLP +P++ P + ++ KR ++ L+
Sbjct 72 ----------VHIPEEELLPG-LEKQAPLRAAKVAPMQSFSLGKRRKKRDGWLMTFTWLV 120
Query 147 ALVVTVIQN---WSNKKS----------GATAPAASNVE---VLPLNSASSTSGDHLVLN 190
VV + W ++K+ ++A +SN E +PLN++++T
Sbjct 121 LFVVIGLSGAWWWQDRKAQQEEITTMADQSSAELSSNSEQGQSVPLNTSTTTDP---ATT 177
Query 191 FTHPTSVHIV---DSTGKVLATGRQASTLELTGQSPFQIRLDDA 231
T P SV T V A + SP Q +D A
Sbjct 178 STPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANVDTA 221
Lambda K H a alpha
0.315 0.130 0.360 0.792 4.96
Gapped
Lambda K H a alpha sigma
0.267 0.0410 0.140 1.90 42.6 43.6
Effective search space used: 924264
Database: 499822d6c019872ea790e3d495cdb503.SwissProt.fasta
Posted date: May 11, 2024 10:23 PM
Number of letters in database: 4,954
Number of sequences in database: 15
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 11
Window for multiple hits: 40
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Data ...
